FFCP PHASE1:Mm9::chr19:10679900..10679956,-: Difference between revisions
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{{FFCP|EntrezGene=225913|HGNC=|MCL_coexpression_id=0|UniProt=Q3UTZ4|association_with_transcript=0bp_to_ENSMUST00000164576,uc008gqk.1_5end|description=CAGE_peak_2_at_Dak_5end|id=chr19:10679900..10679956,-|ontology_enrichment_celltype=CL:0000117!2.86e-07!23;CL:0000337!2.86e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.86e-07,23;CL:0000337,2.86e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!9.44e-21!86;UBERON:0000153!2.94e-18!94;UBERON:0000955!4.95e-18!50;UBERON:0006238!4.95e-18!50;UBERON:0002616!8.54e-18!49;UBERON:0001049!1.62e-17!52;UBERON:0005068!1.62e-17!52;UBERON:0006241!1.62e-17!52;UBERON:0007135!1.62e-17!52;UBERON:0003056!3.00e-17!49;UBERON:0001017!3.39e-17!73;UBERON:0005743!3.39e-17!73;UBERON:0003080!1.36e-16!40;UBERON:0000033!2.08e-16!63;UBERON:0002346!3.39e-16!71;UBERON:0003075!3.39e-16!71;UBERON:0007284!3.39e-16!71;UBERON:0000073!3.44e-16!75;UBERON:0001016!3.44e-16!75;UBERON:0002780!3.81e-16!39;UBERON:0001890!3.81e-16!39;UBERON:0006240!3.81e-16!39;UBERON:0002791!6.18e-13!29;UBERON:0003528!6.18e-13!29;UBERON:0001893!6.18e-13!29;UBERON:0002020!1.41e-12!34;UBERON:0004121!3.88e-12!102;UBERON:0000924!3.88e-12!102;UBERON:0006601!3.88e-12!102;UBERON:0000956!3.00e-10!21;UBERON:0001869!3.00e-10!21;UBERON:0000203!3.00e-10!21;UBERON:0002619!8.33e-09!17;UBERON:0000475!3.07e-08!200;UBERON:0000477!3.84e-08!154|ontology_enrichment_uberon_v019_2=UBERON:0000955,8.32e-18,47;UBERON:0006238,8.32e-18,47;UBERON:0000073,1.12e-17,54;UBERON:0002616,1.41e-17,46;UBERON:0001049,1.62e-17,52;UBERON:0005068,1.62e-17,52;UBERON:0006241,1.62e-17,52;UBERON:0007135,1.62e-17,52;UBERON:0002346,2.18e-17,64;UBERON:0003075,2.18e-17,64;UBERON:0007284,2.18e-17,64;UBERON:0003056,3.00e-17,49;UBERON:0001017,3.39e-17,73;UBERON:0003080,1.36e-16,40;UBERON:0001016,3.44e-16,75;UBERON:0002780,3.81e-16,39;UBERON:0001890,3.81e-16,39;UBERON:0006240,3.81e-16,39;UBERON:0003528,6.18e-13,29;UBERON:0002791,6.18e-13,29;UBERON:0001893,6.18e-13,29;UBERON:0004121,1.31e-12,95;UBERON:0000924,1.31e-12,95;UBERON:0006601,1.31e-12,95;UBERON:0002020,1.41e-12,34;UBERON:0010371,2.72e-11,73;UBERON:0000956,3.00e-10,21;UBERON:0001869,3.00e-10,21;UBERON:0000203,3.00e-10,21;UBERON:0002619,8.33e-09,17;UBERON:0010314,7.78e-08,92|phase1_expression=2.08193501236232,4.53668029931169,4.54999239389536,9.67885476181856,8.5152274090879,1.6787927191189,1.63528848416868,9.42600261123507,4.22366166455,3.97909694747389,4.62288514208863,6.1424562426409,5.9920255475922,6.99363219351979,3.66420737997229,2.02475267389826,2.79824751251259,4.41647031501533,5.62169177783529,5.51706547337439,54.0024892459293,3.17731043842833,3.6567970479451,3.99981056983517,4.35877634027623,1.14846392823004,1.29228598847722,1.50829862880122,2.28028103347649,3.78045194639896,2.21730510655305,8.89042942843484,6.76571266343027,15.8481681015439,2.59966457776147,1.99481574430191,1.63335485009895,4.18531630736908,2.3440060335714,5.75876118371178,4.70585190424811,5.46436387966757,3.88408282424923,7.1761186246079,9.12392380975631,8.62669735159903,7.04152209913235,13.9536100083486,9.22681967484782,13.4156630361256,6.99932108126813,12.9377307928474,4.36234775750115,3.62681071005672,5.71359458542189,3.8588915405392,4.01146815914259,5.15672092277442,10.7227724255587,10.5798195854407,7.60597684207415,8.80995783379743,6.22506357277798,7.19919773825119,8.89979726310277,6.3943210345149,8.38880309451533,14.6002956022191,9.22837549545451,9.04539786822327,8.62332341540666,5.71301968807607,7.50953039235486,9.55428233876641,10.6388472830242,14.7075005857603,6.60695285996332,7.15049093277051,7.0659005297872,11.8697658957174,10.1551284398675,9.37644067002168,11.1673199600552,7.31591393041184,8.09830713217094,5.30331453852602,6.97621235915604,6.89677949553612,3.10477392666055,5.13886608726142,4.92769630792852,6.0229671388697,6.11974200336975,8.09554787456726,7.79731700937203,4.03224198387602,10.2524426696179,10.0553890321054,7.01422212427746,6.71345191569646,3.23939865486365,8.98285341900225,7.64415719119937,0,7.36069539438128,5.82727690592727,5.05524445014783,10.7332846935916,9.06282592765101,5.49235914539852,5.20455980298408,5.1759131313064,6.45723392316964,5.42601505989441,2.82212897125692,9.17366116706631,6.42706916109372,9.25435884287435,3.5384422077995,2.91180329905337,4.19598885074748,1.93950101254089,5.59175283654366,8.78342391034641,5.86450779077674,6.38642638021478,3.47463861067169,4.19931911695385,3.81210681219194,9.43681028250383,6.8625090422794,8.54449594367478,9.73416193076748,9.2057564638919,5.81806524766768,7.30085683804909,2.85150218780886,4.10543003013307,11.3725241295154,8.20723237957248,5.07469727554544,8.96618207290544,8.10279584124071,5.72678307775717,5.78310242786287,6.40568601424249,6.37171727006156,11.1242449417777,5.6047678162539,3.78212160335639,4.57472922826267,5.47989331068937,5.00485048606076,3.1342694986995,3.90986059175093,3.38358253591438,4.21327912387941,4.63226232806487,3.9782889915383,4.55676699578104,3.51789089971644,2.88099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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225913 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UTZ4 | |||
|association_with_transcript=0bp_to_ENSMUST00000164576,uc008gqk.1_5end | |||
|cluster_id=chr19:10679900..10679956,- | |||
|description=CAGE_peak_2_at_Dak_5end | |||
|id=chr19:10679900..10679956,- | |||
|ontology_enrichment_celltype=CL:0000117!2.86e-07!23;CL:0000337!2.86e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.86e-07,23;CL:0000337,2.86e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!9.44e-21!86;UBERON:0000153!2.94e-18!94;UBERON:0000955!4.95e-18!50;UBERON:0006238!4.95e-18!50;UBERON:0002616!8.54e-18!49;UBERON:0001049!1.62e-17!52;UBERON:0005068!1.62e-17!52;UBERON:0006241!1.62e-17!52;UBERON:0007135!1.62e-17!52;UBERON:0003056!3.00e-17!49;UBERON:0001017!3.39e-17!73;UBERON:0005743!3.39e-17!73;UBERON:0003080!1.36e-16!40;UBERON:0000033!2.08e-16!63;UBERON:0002346!3.39e-16!71;UBERON:0003075!3.39e-16!71;UBERON:0007284!3.39e-16!71;UBERON:0000073!3.44e-16!75;UBERON:0001016!3.44e-16!75;UBERON:0002780!3.81e-16!39;UBERON:0001890!3.81e-16!39;UBERON:0006240!3.81e-16!39;UBERON:0002791!6.18e-13!29;UBERON:0003528!6.18e-13!29;UBERON:0001893!6.18e-13!29;UBERON:0002020!1.41e-12!34;UBERON:0004121!3.88e-12!102;UBERON:0000924!3.88e-12!102;UBERON:0006601!3.88e-12!102;UBERON:0000956!3.00e-10!21;UBERON:0001869!3.00e-10!21;UBERON:0000203!3.00e-10!21;UBERON:0002619!8.33e-09!17;UBERON:0000475!3.07e-08!200;UBERON:0000477!3.84e-08!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,8.32e-18,47;UBERON:0006238,8.32e-18,47;UBERON:0000073,1.12e-17,54;UBERON:0002616,1.41e-17,46;UBERON:0001049,1.62e-17,52;UBERON:0005068,1.62e-17,52;UBERON:0006241,1.62e-17,52;UBERON:0007135,1.62e-17,52;UBERON:0002346,2.18e-17,64;UBERON:0003075,2.18e-17,64;UBERON:0007284,2.18e-17,64;UBERON:0003056,3.00e-17,49;UBERON:0001017,3.39e-17,73;UBERON:0003080,1.36e-16,40;UBERON:0001016,3.44e-16,75;UBERON:0002780,3.81e-16,39;UBERON:0001890,3.81e-16,39;UBERON:0006240,3.81e-16,39;UBERON:0003528,6.18e-13,29;UBERON:0002791,6.18e-13,29;UBERON:0001893,6.18e-13,29;UBERON:0004121,1.31e-12,95;UBERON:0000924,1.31e-12,95;UBERON:0006601,1.31e-12,95;UBERON:0002020,1.41e-12,34;UBERON:0010371,2.72e-11,73;UBERON:0000956,3.00e-10,21;UBERON:0001869,3.00e-10,21;UBERON:0000203,3.00e-10,21;UBERON:0002619,8.33e-09,17;UBERON:0010314,7.78e-08,92 | |||
|phase1_expression=2.08193501236232,4.53668029931169,4.54999239389536,9.67885476181856,8.5152274090879,1.6787927191189,1.63528848416868,9.42600261123507,4.22366166455,3.97909694747389,4.62288514208863,6.1424562426409,5.9920255475922,6.99363219351979,3.66420737997229,2.02475267389826,2.79824751251259,4.41647031501533,5.62169177783529,5.51706547337439,54.0024892459293,3.17731043842833,3.6567970479451,3.99981056983517,4.35877634027623,1.14846392823004,1.29228598847722,1.50829862880122,2.28028103347649,3.78045194639896,2.21730510655305,8.89042942843484,6.76571266343027,15.8481681015439,2.59966457776147,1.99481574430191,1.63335485009895,4.18531630736908,2.3440060335714,5.75876118371178,4.70585190424811,5.46436387966757,3.88408282424923,7.1761186246079,9.12392380975631,8.62669735159903,7.04152209913235,13.9536100083486,9.22681967484782,13.4156630361256,6.99932108126813,12.9377307928474,4.36234775750115,3.62681071005672,5.71359458542189,3.8588915405392,4.01146815914259,5.15672092277442,10.7227724255587,10.5798195854407,7.60597684207415,8.80995783379743,6.22506357277798,7.19919773825119,8.89979726310277,6.3943210345149,8.38880309451533,14.6002956022191,9.22837549545451,9.04539786822327,8.62332341540666,5.71301968807607,7.50953039235486,9.55428233876641,10.6388472830242,14.7075005857603,6.60695285996332,7.15049093277051,7.0659005297872,11.8697658957174,10.1551284398675,9.37644067002168,11.1673199600552,7.31591393041184,8.09830713217094,5.30331453852602,6.97621235915604,6.89677949553612,3.10477392666055,5.13886608726142,4.92769630792852,6.0229671388697,6.11974200336975,8.09554787456726,7.79731700937203,4.03224198387602,10.2524426696179,10.0553890321054,7.01422212427746,6.71345191569646,3.23939865486365,8.98285341900225,7.64415719119937,0,7.36069539438128,5.82727690592727,5.05524445014783,10.7332846935916,9.06282592765101,5.49235914539852,5.20455980298408,5.1759131313064,6.45723392316964,5.42601505989441,2.82212897125692,9.17366116706631,6.42706916109372,9.25435884287435,3.5384422077995,2.91180329905337,4.19598885074748,1.93950101254089,5.59175283654366,8.78342391034641,5.86450779077674,6.38642638021478,3.47463861067169,4.19931911695385,3.81210681219194,9.43681028250383,6.8625090422794,8.54449594367478,9.73416193076748,9.2057564638919,5.81806524766768,7.30085683804909,2.85150218780886,4.10543003013307,11.3725241295154,8.20723237957248,5.07469727554544,8.96618207290544,8.10279584124071,5.72678307775717,5.78310242786287,6.40568601424249,6.37171727006156,11.1242449417777,5.6047678162539,3.78212160335639,4.57472922826267,5.47989331068937,5.00485048606076,3.1342694986995,3.90986059175093,3.38358253591438,4.21327912387941,4.63226232806487,3.9782889915383,4.55676699578104,3.51789089971644,2.88099298337624,4.02466050494857,4.52557733019029,4.9365476123961,5.34828072925938,6.70683503499048,2.80236821681207,4.27855609775049,3.94001913789829,2.83740833410495,4.38599962275997,4.39100230582101,4.56301823785264,10.0939175310781,8.64398743985989,4.95628174475697,8.46241813323342,5.33220626338085,3.25131340604614,4.51036114627327,2.21851877085677,4.66993892074228,5.89699440948933,4.2707615539006,3.78807595865225,2.26201687920243,2.78539060857611,5.26403035221624,8.98819408654222,4.97117514711797,4.97853183135918,5.69003702859245,4.45569199177942,2.25415471346161,4.88763186828754,4.84881217919064,2.59502533594179,4.93244989569207,5.01874503130647,5.02395929092399,6.29325536001183,6.52195779591728,4.50481785433454,5.30709286805648,4.49724224769707,5.07150303471257,5.30589751455317,4.07401362850272,4.31544206176216,2.59416362840057,6.31491250332587,1.43768206527355,5.20997326735905,7.80094182786401,6.06189307073068,6.09951205974501,4.3419916922703,7.20537441649758,4.9267767060326,4.23708938749267,7.1292936025579,3.98973422090454,7.37027532743989,6.18913466303636,2.73187107000918,4.72905432318573,3.32197034473162,4.9430978283821,3.4411296090305,4.66249451037918,4.62876987460837,1.50791283939272,3.26343410291226,2.95058563811422,2.20749397043786,7.86697890940181,5.86058432961016,3.27869890753351,3.28212205365685,4.41711507182759,3.51394869866975,7.97066571611356,6.69112634267146,7.35235624471901,5.94460714656548,4.45291771842384,3.79932615284705,3.55759000151871,7.71171159412337,5.10984306749767,7.65682095769198,3.09485222771795,7.09371528781903,7.96470830039777,8.49732226542435,6.34879469625977,7.35559811048003,7.38254732201932,10.1453598821496,4.13485269069154,4.72593848320757,4.27796854061666,6.63677191665214,4.21674434299995,7.21948802737308,16.3411010761818,7.38250485528372,7.37344497561701,7.28745919107414,11.1724347194632,10.5237602385222,9.87294123612726,14.0053876592716,6.8054795338476,11.0152676849186,10.8058915046931,4.122156323537,3.22928853391811,4.58378229453985,2.86493625607528,4.10352249362653,4.66369338607761,7.04616147639937,6.66396435111626,3.09580301944834,3.33350149265481,4.1441060541032,3.96413260390973,6.86334519619568,4.41943917984024,1.81936888020755,3.86959926652387,6.68269432610579,5.852215881251,5.8962645466786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| |||
|short_description=p2@Dak | |||
}} |
Latest revision as of 20:44, 1 October 2015
Short description: | p2@Dak |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dak_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000164576, uc008gqk.1_5end |
EntrezGene: | Dak |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.86e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.86e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
brain | 8.32e-18 | 47 |
future brain | 8.32e-18 | 47 |
regional part of nervous system | 1.12e-17 | 54 |
regional part of brain | 1.41e-17 | 46 |
neural tube | 1.62e-17 | 52 |
neural rod | 1.62e-17 | 52 |
future spinal cord | 1.62e-17 | 52 |
neural keel | 1.62e-17 | 52 |
neurectoderm | 2.18e-17 | 64 |
neural plate | 2.18e-17 | 64 |
presumptive neural plate | 2.18e-17 | 64 |
pre-chordal neural plate | 3.00e-17 | 49 |
central nervous system | 3.39e-17 | 73 |
anterior neural tube | 1.36e-16 | 40 |
nervous system | 3.44e-16 | 75 |
regional part of forebrain | 3.81e-16 | 39 |
forebrain | 3.81e-16 | 39 |
future forebrain | 3.81e-16 | 39 |
brain grey matter | 6.18e-13 | 29 |
regional part of telencephalon | 6.18e-13 | 29 |
telencephalon | 6.18e-13 | 29 |
ectoderm-derived structure | 1.31e-12 | 95 |
ectoderm | 1.31e-12 | 95 |
presumptive ectoderm | 1.31e-12 | 95 |
gray matter | 1.41e-12 | 34 |
ecto-epithelium | 2.72e-11 | 73 |
cerebral cortex | 3.00e-10 | 21 |
cerebral hemisphere | 3.00e-10 | 21 |
pallium | 3.00e-10 | 21 |
regional part of cerebral cortex | 8.33e-09 | 17 |
structure with developmental contribution from neural crest | 7.78e-08 | 92 |