FFCP PHASE1:Mm9::chr8:3624989..3625014,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18545 | |EntrezGene=18545 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=30 | |MCL_coexpression_id=30 | ||
|TSSclassifier=NA | |||
|UniProt=P12660 | |UniProt=P12660 | ||
|association_with_transcript=0bp_to_ENSMUST00000142431_5end | |association_with_transcript=0bp_to_ENSMUST00000142431_5end | ||
|cluster_id=chr8:3624989..3625014,- | |||
|description=CAGE_peak_3_at_Pcp2_5end | |description=CAGE_peak_3_at_Pcp2_5end | ||
|id=chr8:3624989..3625014,- | |id=chr8:3624989..3625014,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!1.97e-08!6;UBERON:0004732!1.97e-08!6;UBERON:0002028!1.97e-08!6;UBERON:0007277!1.97e-08!6;UBERON:0002298!6.67e-08!6;UBERON:0001896!6.26e-07!2;UBERON:0005290!6.26e-07!2;UBERON:0010096!6.26e-07!2 | |ontology_enrichment_uberon=UBERON:0004733!1.97e-08!6;UBERON:0004732!1.97e-08!6;UBERON:0002028!1.97e-08!6;UBERON:0007277!1.97e-08!6;UBERON:0002298!6.67e-08!6;UBERON:0001896!6.26e-07!2;UBERON:0005290!6.26e-07!2;UBERON:0010096!6.26e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,3.20e-17,6;UBERON:0004732,3.20e-17,6;UBERON:0002028,3.20e-17,6;UBERON:0007277,3.20e-17,6;UBERON:0002037,2.95e-12,4;UBERON:0002680,2.95e-12,4;UBERON:0001895,2.95e-12,4;UBERON:0010092,2.95e-12,4;UBERON:0006215,2.95e-12,4;UBERON:0003076,5.92e-09,12;UBERON:0003057,5.92e-09,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.4632900514813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,8.93385596804419,0,0,0.589257170947335,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,211.387735442337,182.637528341333,0,0,0,0,0.149790639404823,1.37250180845588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0.229741875822453,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0.365855945745545,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.4632900514813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,8.93385596804419,0,0,0.589257170947335,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,211.387735442337,182.637528341333,0,0,0,0,0.149790639404823,1.37250180845588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0.229741875822453,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0.365855945745545,0,0.135804113845862,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p3@Pcp2 | |short_description=p3@Pcp2 | ||
}} | }} |
Latest revision as of 22:52, 1 October 2015
Short description: | p3@Pcp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pcp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000142431_5end |
EntrezGene: | Pcp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 3.20e-17 | 6 |
segmental subdivision of nervous system | 3.20e-17 | 6 |
hindbrain | 3.20e-17 | 6 |
presumptive hindbrain | 3.20e-17 | 6 |
cerebellum | 2.95e-12 | 4 |
regional part of metencephalon | 2.95e-12 | 4 |
metencephalon | 2.95e-12 | 4 |
future metencephalon | 2.95e-12 | 4 |
rhombic lip | 2.95e-12 | 4 |
posterior neural tube | 5.92e-09 | 12 |
chordal neural plate | 5.92e-09 | 12 |