Personal tools

FFCP PHASE1:Mm9::chr13:78339382..78339420,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr13:78339382..78339420,- |short_description=p3@Nr2f1 |description=CAGE_peak_3_at_Nr2f1_5end |association_with_transcript=-364bp_to_ENSMUST00000091458_5end |E...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:78339382..78339420,-
|DHSsupport=NA
|short_description=p3@Nr2f1
|DPIdataset=NA
|description=CAGE_peak_3_at_Nr2f1_5end
|association_with_transcript=-364bp_to_ENSMUST00000091458_5end
|EntrezGene=13865
|EntrezGene=13865
|HGNC=
|HGNC=
|MCL_coexpression_id=670
|TSSclassifier=NA
|UniProt=Q32NY6
|UniProt=Q32NY6
|association_with_transcript=-364bp_to_ENSMUST00000091458_5end
|cluster_id=chr13:78339382..78339420,-
|description=CAGE_peak_3_at_Nr2f1_5end
|id=chr13:78339382..78339420,-
|ontology_enrichment_celltype=CL:0000221!9.71e-19!44;CL:0000133!9.71e-19!44;CL:0002319!5.61e-18!43;CL:0000055!4.13e-14!50;CL:0000540!1.57e-12!33;CL:0000047!1.57e-12!33;CL:0000031!1.57e-12!33;CL:0000404!1.57e-12!33;CL:0000117!1.78e-11!23;CL:0000337!1.78e-11!23;CL:0000393!8.84e-10!39;CL:0000211!8.84e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000221,2.59e-20,44;CL:0000133,2.59e-20,44;CL:0002319,2.36e-19,43;CL:0000117,8.34e-13,23;CL:0000337,8.34e-13,23;CL:0000540,1.78e-12,33;CL:0000047,1.78e-12,33;CL:0000031,1.78e-12,33;CL:0000404,1.78e-12,33;CL:0000393,3.67e-09,39;CL:0000211,3.67e-09,39;CL:0000333,2.88e-08,10;CL:0000095,2.88e-08,10;CL:0000243,2.88e-08,10;CL:0000123,2.88e-08,10;CL:0000125,2.88e-08,10;CL:0000030,2.88e-08,10;CL:0000339,2.88e-08,10;CL:0002321,6.14e-08,70;CL:0002453,1.63e-07,8;CL:0002609,2.90e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.43e-27!75;UBERON:0001016!2.43e-27!75;UBERON:0001017!1.76e-26!73;UBERON:0005743!1.76e-26!73;UBERON:0004121!1.35e-24!102;UBERON:0000924!1.35e-24!102;UBERON:0006601!1.35e-24!102;UBERON:0002346!8.80e-21!71;UBERON:0003075!8.80e-21!71;UBERON:0007284!8.80e-21!71;UBERON:0000033!1.45e-19!63;UBERON:0001049!4.57e-19!52;UBERON:0005068!4.57e-19!52;UBERON:0006241!4.57e-19!52;UBERON:0007135!4.57e-19!52;UBERON:0003056!6.50e-18!49;UBERON:0000955!3.62e-17!50;UBERON:0006238!3.62e-17!50;UBERON:0002020!4.29e-17!34;UBERON:0002616!1.12e-16!49;UBERON:0002780!1.09e-15!39;UBERON:0001890!1.09e-15!39;UBERON:0006240!1.09e-15!39;UBERON:0003080!1.55e-15!40;UBERON:0002791!4.75e-14!29;UBERON:0003528!4.75e-14!29;UBERON:0001893!4.75e-14!29;UBERON:0000956!6.94e-14!21;UBERON:0001869!6.94e-14!21;UBERON:0000203!6.94e-14!21;UBERON:0002619!3.47e-11!17;UBERON:0007811!9.24e-11!86;UBERON:0000153!3.75e-10!94;UBERON:0002021!6.45e-07!10;UBERON:0000411!6.45e-07!10;UBERON:0001950!6.45e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.49e-27,75;UBERON:0001017,5.32e-26,73;UBERON:0004121,8.40e-25,95;UBERON:0000924,8.40e-25,95;UBERON:0006601,8.40e-25,95;UBERON:0002020,2.55e-21,34;UBERON:0002346,3.04e-20,64;UBERON:0003075,3.04e-20,64;UBERON:0007284,3.04e-20,64;UBERON:0000073,5.31e-20,54;UBERON:0003056,3.79e-19,49;UBERON:0001049,4.15e-19,52;UBERON:0005068,4.15e-19,52;UBERON:0006241,4.15e-19,52;UBERON:0007135,4.15e-19,52;UBERON:0010371,3.97e-18,73;UBERON:0002780,4.07e-18,39;UBERON:0001890,4.07e-18,39;UBERON:0006240,4.07e-18,39;UBERON:0000956,5.33e-18,21;UBERON:0001869,5.33e-18,21;UBERON:0000203,5.33e-18,21;UBERON:0003080,2.40e-17,40;UBERON:0003528,2.73e-17,29;UBERON:0002791,2.73e-17,29;UBERON:0001893,2.73e-17,29;UBERON:0000955,1.28e-16,47;UBERON:0006238,1.28e-16,47;UBERON:0002616,5.19e-16,46;UBERON:0002619,2.13e-14,17;UBERON:0010314,1.21e-13,92;UBERON:0002021,1.03e-08,10;UBERON:0000411,1.03e-08,10;UBERON:0001950,1.03e-08,10;UBERON:0001954,3.94e-07,7;UBERON:0003022,3.94e-07,7;UBERON:0002421,3.94e-07,7;UBERON:0000349,3.94e-07,7;UBERON:0002600,3.94e-07,7
|phase1_expression=7.20669811971573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,3.12956537739216,6.75877984779384,9.00713349211335,9.72149495371417,3.77963338388479,7.18762821824858,0,0,0,0,0,0,5.66486090406874,10.5798195854407,5.07065122804943,3.04960078862219,3.55717918444456,0,0,0,2.69640099466564,5.76327457982332,13.1685807631767,13.9056116481641,11.567872874326,4.85606673486466,4.63823935998388,10.779190330916,13.0349840584801,13.7882817991503,2.20231761998777,0.510749352340751,1.38245879930619,17.5408762681158,19.212405156506,14.5855743755893,0.558365998002762,0,0.61119299110724,6.18720029494702,4.8406371471695,6.71038004971082,1.8931548333296,2.04043212288321,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,13.9434985578914,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.593768556259299,1.21439728736295,0.913396434936424,0.461230994512117,0.150722640552623,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0,0.441683036920787,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.449371918214468,0,3.39266750704734,3.65031072403781,4.09144731728529,1.66230435647648,1.29793010454206,2.03678727700633,0.124406970610093,0,0.631325567659422,5.85541993332167,1.37941262660084,3.42118046630164,2.41127708537144,1.08858398642125,1.40925092313335,1.40552586839593,0.517406741478031,0.215567992932842,1.13463648100692,0,0.657587197282725,0.556094498451196,0,0.205782136407943,2.18937693500343,0,0,0,3.72826390563903,3.04883877975425,1.2604344302271,0.946978942340841,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0.268412837520744,1.26173969138476,11.4224119741006,0,0,1.2797295032114,0.464473343720877,0,0.605050573870028,0,0,0,0,0,0,0,0,0,0,3.41402221715547,2.28497025219458,0,2.64746726198909,1.35766741017338,0.771494018793504,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,0,0,1.32643988239339,0.488894929326078,0.848725428875941,0.704070744865506,0,0,0,0.630540576424764,1.10732344824387,0.637819074629948,0,0.345369963731791,0,0,0,0,0,0.160550589987792,0.586058432961016,1.47541450839008,0,1.26203287766503,0.780877488593277,0,1.91175038362042,1.78238939265915,0.566153061577665,0.809621403349789,1.16902343164525,3.95287777946523,3.21321316421807,0,2.31485284767432,0.651547837414304,0,0,0.242780636154981,0.604647113929502,0,0,0.614870295887855,0,0,0,0,0,0,0.340439605753788,1.08036656418786,1.16422815404479,2.57204442037911,0.709360934569094,1.24858172321449,1.97458824722545,1.522324745573,0,0,0.220528398054962,0,0,0.120625849856312,0.119372344003136,0,0,0.556275906031529,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,5.53587988766987,1.01659733563424,2.16010681643603,1.04544148007234,0.655087691238533,0.674321731924103,0.743881101528023,0.26175594198403,0,0,0,0.598066184175915,0.330916980914195,0.194451188344048,0.258319646955462,0,0,0,0,0,0,0,1.62180172232131,1.33524244314275,0.77952493786677,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0.501572104035363,5.0827665835536,4.14292712856459,4.58316410751517,6.35856774671644,7.53590771747707,6.0431511791176,2.02506750069542,6.30449684513909,4.53142408984205,4.14208249401456,8.40677515431831,5.1873233542134,2.39027048055788,1.21553358534147,2.51535795153579,1.65459157605013,2.00022055021454,1.23621034343337,0.962757628775446,2.27427490587418,1.2673964994512,1.50901073108861,1.40462261204824,1.40855335290712,1.7230640686684,0,1.73826488917283,1.73618298417335,1.23625770240992,1.32479028120958,2.05721551431249,1.24233064311536,2.14592570952589,2.32554266611726,1.59985946706062,1.94613598150856,0.914639864363863,1.57841826862706,2.03706170768793,3.36685362994643,1.06771516311757,1.57607171800902,0,1.08455788830176,0.771626443924566,3.99696924700713,0.935726433781634,0.859484216193193,0,0,0.231867835620421
|phase1_expression=7.20669811971573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,3.12956537739216,6.75877984779384,9.00713349211335,9.72149495371417,3.77963338388479,7.18762821824858,0,0,0,0,0,0,5.66486090406874,10.5798195854407,5.07065122804943,3.04960078862219,3.55717918444456,0,0,0,2.69640099466564,5.76327457982332,13.1685807631767,13.9056116481641,11.567872874326,4.85606673486466,4.63823935998388,10.779190330916,13.0349840584801,13.7882817991503,2.20231761998777,0.510749352340751,1.38245879930619,17.5408762681158,19.212405156506,14.5855743755893,0.558365998002762,0,0.61119299110724,6.18720029494702,4.8406371471695,6.71038004971082,1.8931548333296,2.04043212288321,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0.259786004602869,0,13.9434985578914,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.593768556259299,1.21439728736295,0.913396434936424,0.461230994512117,0.150722640552623,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0,0.441683036920787,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.449371918214468,0,3.39266750704734,3.65031072403781,4.09144731728529,1.66230435647648,1.29793010454206,2.03678727700633,0.124406970610093,0,0.631325567659422,5.85541993332167,1.37941262660084,3.42118046630164,2.41127708537144,1.08858398642125,1.40925092313335,1.40552586839593,0.517406741478031,0.215567992932842,1.13463648100692,0,0.657587197282725,0.556094498451196,0,0.205782136407943,2.18937693500343,0,0,0,3.72826390563903,3.04883877975425,1.2604344302271,0.946978942340841,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0,0.268412837520744,1.26173969138476,11.4224119741006,0,0,1.2797295032114,0.464473343720877,0,0.605050573870028,0,0,0,0,0,0,0,0,0,0,3.41402221715547,2.28497025219458,0,2.64746726198909,1.35766741017338,0.771494018793504,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505157755894224,0,0,0,1.32643988239339,0.488894929326078,0.848725428875941,0.704070744865506,0,0,0,0.630540576424764,1.10732344824387,0.637819074629948,0,0.345369963731791,0,0,0,0,0,0.160550589987792,0.586058432961016,1.47541450839008,0,1.26203287766503,0.780877488593277,0,1.91175038362042,1.78238939265915,0.566153061577665,0.809621403349789,1.16902343164525,3.95287777946523,3.21321316421807,0,2.31485284767432,0.651547837414304,0,0,0.242780636154981,0.604647113929502,0,0,0.614870295887855,0,0,0,0,0,0,0.340439605753788,1.08036656418786,1.16422815404479,2.57204442037911,0.709360934569094,1.24858172321449,1.97458824722545,1.522324745573,0,0,0.220528398054962,0,0,0.120625849856312,0.119372344003136,0,0,0.556275906031529,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,5.53587988766987,1.01659733563424,2.16010681643603,1.04544148007234,0.655087691238533,0.674321731924103,0.743881101528023,0.26175594198403,0,0,0,0.598066184175915,0.330916980914195,0.194451188344048,0.258319646955462,0,0,0,0,0,0,0,1.62180172232131,1.33524244314275,0.77952493786677,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0.501572104035363,5.0827665835536,4.14292712856459,4.58316410751517,6.35856774671644,7.53590771747707,6.0431511791176,2.02506750069542,6.30449684513909,4.53142408984205,4.14208249401456,8.40677515431831,5.1873233542134,2.39027048055788,1.21553358534147,2.51535795153579,1.65459157605013,2.00022055021454,1.23621034343337,0.962757628775446,2.27427490587418,1.2673964994512,1.50901073108861,1.40462261204824,1.40855335290712,1.7230640686684,0,1.73826488917283,1.73618298417335,1.23625770240992,1.32479028120958,2.05721551431249,1.24233064311536,2.14592570952589,2.32554266611726,1.59985946706062,1.94613598150856,0.914639864363863,1.57841826862706,2.03706170768793,3.36685362994643,1.06771516311757,1.57607171800902,0,1.08455788830176,0.771626443924566,3.99696924700713,0.935726433781634,0.859484216193193,0,0,0.231867835620421
|short_description=p3@Nr2f1
}}
}}

Latest revision as of 23:06, 1 October 2015

Short description:p3@Nr2f1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nr2f1_5end
Coexpression cluster:MCL_coexpression_mm9:670
Association with transcript: -364bp_to_ENSMUST00000091458_5end
EntrezGene:Nr2f1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nr2f1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.01
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.17
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F92.04
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G111.42
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E35.54
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I88.41
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system4.49e-2775
central nervous system5.32e-2673
ectoderm-derived structure8.40e-2595
ectoderm8.40e-2595
presumptive ectoderm8.40e-2595
gray matter2.55e-2134
neurectoderm3.04e-2064
neural plate3.04e-2064
presumptive neural plate3.04e-2064
regional part of nervous system5.31e-2054
pre-chordal neural plate3.79e-1949
neural tube4.15e-1952
neural rod4.15e-1952
future spinal cord4.15e-1952
neural keel4.15e-1952
ecto-epithelium3.97e-1873
regional part of forebrain4.07e-1839
forebrain4.07e-1839
future forebrain4.07e-1839
cerebral cortex5.33e-1821
cerebral hemisphere5.33e-1821
pallium5.33e-1821
anterior neural tube2.40e-1740
brain grey matter2.73e-1729
regional part of telencephalon2.73e-1729
telencephalon2.73e-1729
brain1.28e-1647
future brain1.28e-1647
regional part of brain5.19e-1646
regional part of cerebral cortex2.13e-1417
structure with developmental contribution from neural crest1.21e-1392
occipital lobe1.03e-0810
visual cortex1.03e-0810
neocortex1.03e-0810
Ammon's horn3.94e-077
lobe parts of cerebral cortex3.94e-077
hippocampal formation3.94e-077
limbic system3.94e-077
limbic lobe3.94e-077
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:78339382..78339420,-&oldid=4327115"