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FFCP PHASE1:Mm9::chr2:113668901..113668931,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20394
|EntrezGene=20394
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000139975_5end
|association_with_transcript=0bp_to_ENSMUST00000139975_5end
|cluster_id=chr2:113668901..113668931,-
|description=CAGE_peak_3_at_Scg5_5end
|description=CAGE_peak_3_at_Scg5_5end
|id=chr2:113668901..113668931,-
|id=chr2:113668901..113668931,-
|ontology_enrichment_celltype=CL:0000221!5.66e-16!44;CL:0000133!5.66e-16!44;CL:0002319!9.88e-16!43;CL:0000117!2.22e-14!23;CL:0000337!2.22e-14!23;CL:0000540!3.10e-14!33;CL:0000047!3.10e-14!33;CL:0000031!3.10e-14!33;CL:0000404!3.10e-14!33;CL:0000055!3.12e-11!50;CL:0000393!5.38e-10!39;CL:0000211!5.38e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.01e-24,23;CL:0000337,3.01e-24,23;CL:0000540,1.98e-17,33;CL:0000047,1.98e-17,33;CL:0000031,1.98e-17,33;CL:0000404,1.98e-17,33;CL:0002319,1.81e-15,43;CL:0000221,6.27e-15,44;CL:0000133,6.27e-15,44;CL:0000393,1.32e-13,39;CL:0000211,1.32e-13,39;CL:0002609,2.70e-08,6;CL:0002321,3.41e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.74e-41!71;UBERON:0003075!6.74e-41!71;UBERON:0007284!6.74e-41!71;UBERON:0004121!1.16e-37!102;UBERON:0000924!1.16e-37!102;UBERON:0006601!1.16e-37!102;UBERON:0001017!2.51e-37!73;UBERON:0005743!2.51e-37!73;UBERON:0000073!3.48e-37!75;UBERON:0001016!3.48e-37!75;UBERON:0000033!1.77e-32!63;UBERON:0001049!2.58e-32!52;UBERON:0005068!2.58e-32!52;UBERON:0006241!2.58e-32!52;UBERON:0007135!2.58e-32!52;UBERON:0003056!1.02e-30!49;UBERON:0000955!5.06e-29!50;UBERON:0006238!5.06e-29!50;UBERON:0002616!3.04e-28!49;UBERON:0003080!6.36e-26!40;UBERON:0002780!2.53e-25!39;UBERON:0001890!2.53e-25!39;UBERON:0006240!2.53e-25!39;UBERON:0002020!2.41e-23!34;UBERON:0007811!4.31e-21!86;UBERON:0002791!9.79e-20!29;UBERON:0003528!9.79e-20!29;UBERON:0001893!9.79e-20!29;UBERON:0000153!1.78e-17!94;UBERON:0000956!8.43e-15!21;UBERON:0001869!8.43e-15!21;UBERON:0000203!8.43e-15!21;UBERON:0002619!7.07e-12!17;UBERON:0002021!4.61e-08!10;UBERON:0000411!4.61e-08!10;UBERON:0001950!4.61e-08!10;UBERON:0003076!8.09e-07!12;UBERON:0003057!8.09e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.97e-52,64;UBERON:0003075,5.97e-52,64;UBERON:0007284,5.97e-52,64;UBERON:0000073,2.74e-50,54;UBERON:0001049,6.57e-50,52;UBERON:0005068,6.57e-50,52;UBERON:0006241,6.57e-50,52;UBERON:0007135,6.57e-50,52;UBERON:0001017,3.95e-49,73;UBERON:0001016,2.25e-47,75;UBERON:0004121,2.19e-45,95;UBERON:0000924,2.19e-45,95;UBERON:0006601,2.19e-45,95;UBERON:0000955,9.44e-44,47;UBERON:0006238,9.44e-44,47;UBERON:0010371,1.53e-43,73;UBERON:0003056,3.66e-43,49;UBERON:0002616,1.96e-42,46;UBERON:0003080,2.86e-38,40;UBERON:0002780,3.06e-37,39;UBERON:0001890,3.06e-37,39;UBERON:0006240,3.06e-37,39;UBERON:0010314,3.35e-35,92;UBERON:0002020,9.76e-34,34;UBERON:0003528,1.27e-27,29;UBERON:0002791,1.27e-27,29;UBERON:0001893,1.27e-27,29;UBERON:0000956,5.72e-21,21;UBERON:0001869,5.72e-21,21;UBERON:0000203,5.72e-21,21;UBERON:0002619,4.90e-16,17;UBERON:0000025,6.89e-15,114;UBERON:0004111,5.18e-13,122;UBERON:0002021,9.23e-13,10;UBERON:0000411,9.23e-13,10;UBERON:0001950,9.23e-13,10;UBERON:0003076,3.69e-11,12;UBERON:0003057,3.69e-11,12;UBERON:0000483,2.30e-10,174;UBERON:0000119,4.49e-10,176;UBERON:0001894,4.58e-10,10;UBERON:0006222,4.58e-10,10;UBERON:0011216,1.71e-09,194;UBERON:0000007,2.57e-08,8;UBERON:0003296,2.57e-08,8;UBERON:0010133,2.57e-08,8;UBERON:0002240,7.73e-08,6;UBERON:0005174,7.73e-08,6;UBERON:0001137,7.73e-08,6;UBERON:0002420,1.03e-07,8;UBERON:0007245,1.03e-07,8;UBERON:0010009,1.03e-07,8;UBERON:0010011,1.03e-07,8;UBERON:0000454,1.03e-07,8;UBERON:0001948,3.53e-07,5;UBERON:0002315,3.53e-07,5
|phase1_expression=0.480446541314382,0.348975407639361,1.36499771816861,0,0,0.503637815735669,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0,0.171200729931206,1.13646523144697,0,0,0,0,0,0,2.04103896362567,0,0,0.47997726838022,0.91763712426868,0.57423196411502,0,0.861884930743556,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,0.659058548203415,0.58328969722285,0.55994568650145,2.87505128729943,0,0,0.336093799142464,0,0,0,3.84401275633236,1.5869729378161,3.1691570175309,0,0,0,0,0,0.299600110518405,1.92109152660777,3.7328260431052,4.05017814995072,5.8890989178387,4.57041575046086,5.30084498283872,4.28717797252339,3.25874601462004,4.5960939330501,0,4.97980618532232,3.07213066512487,3.29715719325485,3.65950574409639,3.12548022334056,5.02529398202486,7.31591393041184,5.04234217663473,3.53554302568401,3.27454865837937,4.84638559145781,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0.258937883647172,1.33597925158342,0.867426633830679,0.304465478312141,0.922461989024234,1.20578112442098,1.29347577849275,0.376999773989026,0,0,0,0,0,0,0,2.34224637609238,3.35114730901528,0,0,0,0,3.14560342750128,0.915001205637253,2.76439574648302,7.47444576826789,6.13717097592793,3.32460871295296,2.59586020908412,0.101839363850316,0,0,1.68353484709179,0.650602214813519,0.689706313300419,1.98068342785884,2.41127708537144,4.01415344992834,3.84341160854549,3.18585863503078,3.3631438196072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.67333763394985,5.14523061896422,0,0,0.213288250535234,0.232236671860439,0.515469845288373,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0,0,0.342745537829186,0,0,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,3.21101179975584,2.93029216480508,0,0,0.94652465824877,0.390438744296638,0.646270193198397,0,1.11399337041197,1.13230612315533,0,0.292255857911312,0.790575555893047,4.17717711348349,0,0,0,0,0,0,0,0,0.295301892880773,0,0.516856586336442,0.727067458955011,0,0.316036757935816,0,0,9.19186935535228,1.44048875225048,1.03486947026204,1.07168517515796,2.6601035046341,2.14042581122485,3.1264313914403,5.48036908406279,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.432021363287205,0,0,0.269728692769641,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,4.14292712856459,2.86447756719698,5.499301834998,4.11049511862385,4.5323633843382,5.40018000185445,2.70192721934532,4.98456649882625,5.1776031175182,0.93408612825759,0.399024873401031,1.02440163452481,0,0.628839487883947,0.367687016900028,0.222246727801615,0,0,1.01078884705519,0.50695859978048,0.188626341386076,0.468207537349412,0.832326981263301,0.574354689556133,0.476293691283074,0.695305955669133,0.38581844092741,0,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0.436039249896986,0.846984423737976,0.25384382367503,0.365855945745545,0.263069711437843,1.08643291076689,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.309873682371932,0.192906610981141,1.49886346762768,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0
|phase1_expression=0.480446541314382,0.348975407639361,1.36499771816861,0,0,0.503637815735669,0.233612640595526,0.129123323441576,0,0.234064526321993,0,0,0.171200729931206,1.13646523144697,0,0,0,0,0,0,2.04103896362567,0,0,0.47997726838022,0.91763712426868,0.57423196411502,0,0.861884930743556,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,0.659058548203415,0.58328969722285,0.55994568650145,2.87505128729943,0,0,0.336093799142464,0,0,0,3.84401275633236,1.5869729378161,3.1691570175309,0,0,0,0,0,0.299600110518405,1.92109152660777,3.7328260431052,4.05017814995072,5.8890989178387,4.57041575046086,5.30084498283872,4.28717797252339,3.25874601462004,4.5960939330501,0,4.97980618532232,3.07213066512487,3.29715719325485,3.65950574409639,3.12548022334056,5.02529398202486,7.31591393041184,5.04234217663473,3.53554302568401,3.27454865837937,4.84638559145781,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0.258937883647172,1.33597925158342,0.867426633830679,0.304465478312141,0.922461989024234,1.20578112442098,1.29347577849275,0.376999773989026,0,0,0,0,0,0,0,2.34224637609238,3.35114730901528,0,0,0,0,3.14560342750128,0.915001205637253,2.76439574648302,7.47444576826789,6.13717097592793,3.32460871295296,2.59586020908412,0.101839363850316,0,0,1.68353484709179,0.650602214813519,0.689706313300419,1.98068342785884,2.41127708537144,4.01415344992834,3.84341160854549,3.18585863503078,3.3631438196072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.67333763394985,5.14523061896422,0,0,0.213288250535234,0.232236671860439,0.515469845288373,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0,0,0.342745537829186,0,0,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,3.21101179975584,2.93029216480508,0,0,0.94652465824877,0.390438744296638,0.646270193198397,0,1.11399337041197,1.13230612315533,0,0.292255857911312,0.790575555893047,4.17717711348349,0,0,0,0,0,0,0,0,0.295301892880773,0,0.516856586336442,0.727067458955011,0,0.316036757935816,0,0,9.19186935535228,1.44048875225048,1.03486947026204,1.07168517515796,2.6601035046341,2.14042581122485,3.1264313914403,5.48036908406279,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.432021363287205,0,0,0.269728692769641,0,0,0,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,4.14292712856459,2.86447756719698,5.499301834998,4.11049511862385,4.5323633843382,5.40018000185445,2.70192721934532,4.98456649882625,5.1776031175182,0.93408612825759,0.399024873401031,1.02440163452481,0,0.628839487883947,0.367687016900028,0.222246727801615,0,0,1.01078884705519,0.50695859978048,0.188626341386076,0.468207537349412,0.832326981263301,0.574354689556133,0.476293691283074,0.695305955669133,0.38581844092741,0,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0.436039249896986,0.846984423737976,0.25384382367503,0.365855945745545,0.263069711437843,1.08643291076689,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.309873682371932,0.192906610981141,1.49886346762768,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0
|short_description=p3@Scg5
|short_description=p3@Scg5
}}
}}

Latest revision as of 23:34, 1 October 2015

Short description:p3@Scg5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Scg5_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000139975_5end
EntrezGene:Scg5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Scg5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D57.47
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C64.01
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G15.15
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm5.97e-5264
neural plate5.97e-5264
presumptive neural plate5.97e-5264
regional part of nervous system2.74e-5054
neural tube6.57e-5052
neural rod6.57e-5052
future spinal cord6.57e-5052
neural keel6.57e-5052
central nervous system3.95e-4973
nervous system2.25e-4775
ectoderm-derived structure2.19e-4595
ectoderm2.19e-4595
presumptive ectoderm2.19e-4595
brain9.44e-4447
future brain9.44e-4447
ecto-epithelium1.53e-4373
pre-chordal neural plate3.66e-4349
regional part of brain1.96e-4246
anterior neural tube2.86e-3840
regional part of forebrain3.06e-3739
forebrain3.06e-3739
future forebrain3.06e-3739
structure with developmental contribution from neural crest3.35e-3592
gray matter9.76e-3434
brain grey matter1.27e-2729
regional part of telencephalon1.27e-2729
telencephalon1.27e-2729
cerebral cortex5.72e-2121
cerebral hemisphere5.72e-2121
pallium5.72e-2121
regional part of cerebral cortex4.90e-1617
tube6.89e-15114
anatomical conduit5.18e-13122
occipital lobe9.23e-1310
visual cortex9.23e-1310
neocortex9.23e-1310
posterior neural tube3.69e-1112
chordal neural plate3.69e-1112
epithelium2.30e-10174
cell layer4.49e-10176
diencephalon4.58e-1010
future diencephalon4.58e-1010
organ system subdivision1.71e-09194
pituitary gland2.57e-088
gland of diencephalon2.57e-088
neuroendocrine gland2.57e-088
spinal cord7.73e-086
dorsal region element7.73e-086
dorsum7.73e-086
basal ganglion1.03e-078
nuclear complex of neuraxis1.03e-078
aggregate regional part of brain1.03e-078
collection of basal ganglia1.03e-078
cerebral subcortex1.03e-078
regional part of spinal cord3.53e-075
gray matter of spinal cord3.53e-075
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