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{{f5samples
{{f5samples
|id=FF:10034-101E7
|DRA_sample_Accession=CAGE@SAMD00005014
|name=parietal lobe, adult, pool1
|accession_numbers=CAGE;DRX008702;DRR009574;DRZ000999;DRZ002384;DRZ012349;DRZ013734
|sample_id=10034
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001872,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950
|rna_tube_id=101E7
|rna_box=101
|rna_position=E7
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=Clontech
|rna_lot_number=636571
|rna_catalog_number=Cat:636571
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=35-89 years old adult
|sample_tissue=parietal lobe
|sample_donor(cell lot)=4 pool
|sample_sex=mixed
|sample_age=
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=normal
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_weight_ug=50
|rna_concentration=1
|sample_note=
|profile_hcage=CNhs10641,LSID658,release008,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0000956,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001869,UBERON:0001872,UBERON:0001890,UBERON:0001893,UBERON:0001950,UBERON:0002050,UBERON:0002346,UBERON:0002532,UBERON:0002616,UBERON:0002619,UBERON:0002780,UBERON:0002791,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010034
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.56!363.06!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.39!244.28!OLIG1;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.32!209.34!PEG3;;chr22:38380543..38380569,-!p1@SOX10!2.19!154.54!SOX10;;chr17:53342311..53342400,+!p1@HLF!2.08!136.28!HLF;;chr11:61520075..61520136,+!p1@C11orf9!1.99!199.63!C11orf9;;chr9:77112244..77112262,+!p1@RORB!1.94!96.14!RORB;;chr9:114287433..114287513,+!p1@ZNF483!1.91!199.57!ZNF483;;chr21:34398234..34398250,+!p1@OLIG2!1.91!80.79!OLIG2;;chr10:64134120..64134183,+!p1@ZNF365!1.86!85.29!ZNF365;;chr4:57547454..57547469,-!p1@HOPX!1.83!66.84!HOPX;;chr17:37764128..37764258,-!p1@NEUROD2!1.82!65.45!NEUROD2;;chr2:162272785..162272836,+!p1@TBR1!1.77!58.34!TBR1;;chr14:29235961..29236008,+!p1@FOXG1!1.77!57.96!FOXG1;;chr15:80733570..80733659,+!p2@ARNT2!1.76!56.88!ARNT2;;chr3:181429704..181429722,+!p1@SOX2!1.73!52.57!SOX2;;chr2:2334997..2335053,-!p1@MYT1L!1.73!52.32!MYT1L;;chr2:145277882..145277967,-!p3@ZEB2!1.72!86.88!ZEB2;;chr2:95963052..95963106,+!p1@KCNIP3!1.69!47.82!KCNIP3;;chr2:166326200..166326216,+!p1@CSRNP3!1.68!68.11!CSRNP3;;chr5:88178983..88179012,-!p1@MEF2C!1.67!337.12!MEF2C;;chr8:40755333..40755352,-!p1@ZMAT4!1.67!45.85!ZMAT4;;chr8:53322304..53322340,-!p1@ST18!1.67!45.72!ST18;;chr4:81118647..81118666,+!p1@PRDM8!1.65!56.76!PRDM8;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.65!43.69!POU3F3;;chr15:80735246..80735321,+!p3@ARNT2!1.64!43.12!ARNT2;;chr19:13135386..13135435,+!p4@NFIX!1.61!40.21!NFIX;;chr21:34442540..34442560,+!p2@OLIG1!1.58!37.23!OLIG1;;chr19:13135582..13135600,+!p3@NFIX!1.54!33.61!NFIX;;chr16:1031762..1031781,+!p1@SOX8!1.53!33.10!SOX8;;chr12:26277817..26277863,-!p2@BHLHE41!1.52!42.62!BHLHE41;;chr22:41763452..41763466,+!p2@TEF!1.52!32.34!TEF;;chr18:53070846..53070902,-!p6@TCF4!1.51!31.33!TCF4;;chr10:134599649..134599653,-!p1@NKX6-2!1.51!31.33!NKX6-2;;chr7:31380292..31380351,-!p1@NEUROD6!1.50!30.63!NEUROD6;;chr2:60781201..60781258,-!p3@BCL11A!1.49!29.68!BCL11A;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.48!28.85!SMARCE1;;chr15:80696703..80696754,+!p1@ARNT2!1.47!37.92!ARNT2;;chr2:95963120..95963136,+!p2@KCNIP3!1.46!28.09!KCNIP3;;chr3:181429741..181429767,+!p2@SOX2!1.46!27.59!SOX2;;chr11:113930425..113930471,+!p1@ZBTB16!1.42!36.34!ZBTB16;;chr11:125034640..125034655,+!p1@PKNOX2!1.41!24.99!PKNOX2;;chr19:57352109..57352153,-!p2@ZIM2!1.41!24.86!ZIM2;;chr14:29236269..29236285,+!p3@FOXG1!1.41!24.54!FOXG1;;chr14:29234581..29234601,+!p2@FOXG1!1.40!23.91!FOXG1;;chr5:88179017..88179046,-!p2@MEF2C!1.39!91.26!MEF2C;;chr12:54779511..54779577,-!p5@ZNF385A!1.37!22.26!ZNF385A;;chr2:162272889..162272915,+!p2@TBR1!1.37!22.26!TBR1;;chrX:25034067..25034088,-!p1@ARX!1.36!21.69!ARX;;chr1:151032860..151032918,+!p1@MLLT11!1.35!248.40!MLLT11;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.32!19.91!POU3F3;;chr19:46801639..46801699,+!p1@HIF3A!1.31!19.47!HIF3A;;chr12:106976774..106976788,+!p1@RFX4!1.31!19.28!RFX4;;chr11:8102846..8102892,+!p1@TUB!1.30!26.38!TUB;;chr8:145560371..145560449,-!p1@SCRT1!1.30!19.02!SCRT1;;chr19:38720294..38720348,-!p1@DPF1!1.28!22.26!DPF1;;chr4:57522166..57522260,-!p2@HOPX!1.28!20.55!HOPX;;chr1:214161272..214161322,+!p1@PROX1!1.27!24.73!PROX1;;chr14:33403881..33403924,+!p1@NPAS3!1.26!17.19!NPAS3;;chr1:244214577..244214593,+!p1@ZNF238!1.26!17.00!ZNF238;;chr10:48355030..48355090,+!p1@ZNF488!1.25!21.43!ZNF488;;chr12:106976678..106976708,+!p2@RFX4!1.25!16.74!RFX4;;chr17:7492684..7492778,-!p2@SOX15!1.24!34.69!SOX15;;chr12:54785074..54785122,-!p2@ZNF385A!1.24!25.30!ZNF385A;;chr10:64133862..64133884,+!p4@ZNF365!1.24!16.55!ZNF365;;chr19:38085768..38085821,+!p1@ZNF540!1.23!23.65!ZNF540;;chr6:15401104..15401166,+!p5@JARID2!1.23!16.11!JARID2;;chr7:63505799..63505904,+!p1@ZNF727!1.22!15.66!ZNF727;;chr19:30863271..30863338,+!p1@ZNF536!1.22!15.66!ZNF536;;chr8:53322347..53322378,-!p2@ST18!1.18!14.21!ST18;;chr2:166428839..166428859,+!p2@CSRNP3!1.18!14.14!CSRNP3;;chrX:85969626..85969664,+!p1@DACH2!1.18!14.14!DACH2;;chr9:126774018..126774055,+!p1@LHX2!1.18!14.01!LHX2;;chr6:19837592..19837621,+!p1@ID4!1.17!84.41!ID4;;chr1:151032922..151032951,+!p2@MLLT11!1.17!23.08!MLLT11;;chrX:118739835..118739862,-!p1@NKRF!1.17!15.09!NKRF;;chr8:145560111..145560165,-!p2@SCRT1!1.17!13.63!SCRT1;;chr12:26277956..26277980,-!p1@BHLHE41!1.16!48.70!BHLHE41;;chr8:22550982..22550999,-!p1@EGR3!1.16!37.54!EGR3;;chr19:46800289..46800327,+!p2@HIF3A!1.15!13.13!HIF3A;;chr3:24536253..24536328,-!p1@THRB!1.14!24.42!THRB;;chr15:31658288..31658338,+!p4@KLF13!1.13!12.62!KLF13;;chr11:125034605..125034636,+!p2@PKNOX2!1.13!12.56!PKNOX2;;chr3:141105705..141105770,+!p4@ZBTB38!1.12!14.78!ZBTB38;;chr4:57522598..57522664,-!p3@HOPX!1.12!12.05!HOPX;;chr20:62680984..62680999,-!p1@SOX18!1.11!15.92!SOX18;;chrX:118739782..118739829,-!p2@NKRF!1.11!11.80!NKRF;;chr1:2461692..2461710,-!p1@HES5!1.10!11.73!HES5;;chr2:42721205..42721307,+!p4@MTA3!1.10!11.61!MTA3;;chr19:13134772..13134822,+!p2@NFIX!1.08!16.23!NFIX;;chr6:126112039..126112062,+!p8@NCOA7!1.08!13.44!NCOA7;;chr10:119302232..119302265,+!p1@EMX2!1.08!11.10!EMX2;;chr2:145275982..145276003,-!p7@ZEB2!1.08!11.10!ZEB2;;chr9:77112225..77112238,+!p2@RORB!1.08!11.03!RORB;;chr19:58545454..58545498,+!p1@ZSCAN1!1.08!10.91!ZSCAN1;;chr19:4065848..4065909,-!p4@ZBTB7A!1.07!21.05!ZBTB7A;;chr2:60780607..60780624,-!p2@BCL11A!1.06!32.66!BCL11A;;chr6:143266185..143266238,-!p2@HIVEP2!1.06!14.71!HIVEP2;;chr3:24536332..24536358,-!p2@THRB!1.06!10.53!THRB;;chr3:21792682..21792720,-!p1@ZNF385D!1.06!10.40!ZNF385D;;chr7:73038839..73038862,-!p1@MLXIPL!1.05!10.15!MLXIPL;;chr1:8585945..8586056,-!p3@RERE!1.04!34.05!RERE;;chr11:113930291..113930339,+!p2@ZBTB16!1.04!16.23!ZBTB16;;chr3:126076242..126076257,-!p1@KLF15!1.04!12.62!KLF15;;chr2:166428861..166428883,+!p3@CSRNP3!1.04!10.08!CSRNP3;;chr19:13135566..13135577,+!p9@NFIX!1.04!10.08!NFIX;;chr9:126773880..126773895,+!p2@LHX2!1.04!10.08!LHX2;;chr2:2335109..2335134,-!p2@MYT1L!1.04!10.02!MYT1L;;chr5:71803177..71803255,-!p1@ZNF366!1.04!9.96!ZNF366;;chr2:162272716..162272753,+!p3@TBR1!1.04!9.89!TBR1;;chr11:31832658..31832681,-!p1@PAX6!1.04!9.89!PAX6;;chr10:64134045..64134083,+!p3@ZNF365!1.03!9.83!ZNF365;;chr2:73520667..73520683,-!p1@EGR4!1.03!9.64!EGR4;;chr11:8102819..8102845,+!p3@TUB!1.02!11.86!TUB;;chr1:40105299..40105326,-!p1@HEYL!1.02!9.58!HEYL;;chr12:24102576..24102623,-!p2@SOX5!1.02!9.45!SOX5;;chr19:13135731..13135787,+!p10@NFIX!1.01!9.26!NFIX;;chr17:70117153..70117174,+!p1@SOX9!1.00!93.98!SOX9;;chr7:150974206..150974255,-!p1@SMARCD3!1.00!57.71!SMARCD3;;chr1:61548069..61548102,+!p3@NFIA!0.99!21.94!NFIA;;chr5:92920256..92920282,+!p7@NR2F1!0.99!10.78!NR2F1;;chr19:57183114..57183145,-!p1@ZNF835!0.99!9.89!ZNF835;;chr20:42544782..42544828,+!p4@TOX2!0.99!8.88!TOX2;;chr18:53070913..53070933,-!p16@TCF4!0.99!8.75!TCF4;;chr12:103351444..103351461,+!p1@ASCL1!0.99!8.69!ASCL1;;chr14:33408072..33408114,+!p2@NPAS3!0.98!10.27!NPAS3;;chr18:53068911..53068935,-!p4@TCF4!0.98!9.77!TCF4;;chr10:64133910..64133925,+!p5@ZNF365!0.98!8.56!ZNF365;;chr12:26277929..26277955,-!p3@BHLHE41!0.97!12.05!BHLHE41;;chr16:51185318..51185348,-!p2@SALL1!0.97!8.43!SALL1;;chrY:21906594..21906622,-!p1@KDM5D!0.97!8.37!KDM5D;;chr2:180726291..180726311,-!p1@ZNF385B!0.97!8.24!ZNF385B;;chr17:4890919..4890985,-!p1@CAMTA2!0.96!77.81!CAMTA2;;chr1:151032739..151032748,+!p6@MLLT11!0.96!10.21!MLLT11;;chr2:200323414..200323455,-!p1@SATB2!0.95!17.31!SATB2;;chr13:100634031..100634045,+!p1@ZIC2!0.95!7.86!ZIC2;;chr2:192015750..192015793,-!p2@STAT4!0.94!10.46!STAT4;;chr16:85932760..85932775,+!p1@IRF8!0.94!7.80!IRF8;;chr2:74229812..74229867,+!p1@TET3!0.93!19.66!TET3;;chr5:138609489..138609542,+!p8@MATR3!0.93!7.61!MATR3;;chr8:30890810..30890880,-!p1@PURG!0.93!7.55!PURG;;chr9:126774058..126774081,+!p3@LHX2!0.93!7.48!LHX2;;chr2:2328725..2328739,-!p5@MYT1L!0.93!7.42!MYT1L;;chr2:2335070..2335098,-!p4@MYT1L!0.93!7.42!MYT1L;;chr11:47400078..47400106,-!p1@SPI1!0.93!7.42!SPI1;;chr19:3359257..3359362,+!p3@NFIC!0.92!22.89!NFIC;;chr15:31618903..31618962,+!p3@KLF13!0.92!20.67!KLF13;;chr6:1312325..1312340,+!p1@FOXQ1!0.92!12.11!FOXQ1;;chr21:34442584..34442587,+!p3@OLIG1!0.92!7.36!OLIG1;;chr11:31832862..31832884,-!p2@PAX6!0.92!7.29!PAX6;;chr2:180726331..180726344,-!p5@ZNF385B!0.92!7.23!ZNF385B;;chr17:38219209..38219230,+!p1@THRA!0.91!98.10!THRA;;chr22:41777927..41777971,+!p1@TEF!0.91!62.65!TEF;;chr3:33482052..33482116,-!p2@UBP1!0.91!11.10!UBP1;;chr19:7580549..7580596,+!p3@ZNF358!0.91!7.17!ZNF358;;chr11:113930401..113930422,+!p3@ZBTB16!0.91!7.17!ZBTB16;;chr19:3359158..3359209,+!p5@NFIC!0.91!7.04!NFIC;;chr3:18466787..18466839,-!p1@SATB1!0.90!32.72!SATB1;;chr3:52001396..52001425,-!p4@PCBP4!0.90!12.87!PCBP4;;chr12:125003087..125003141,-!p4@NCOR2!0.90!9.07!NCOR2;;chr2:105470614..105470625,+!p@chr2:105470614..105470625,+!0.90!6.98!POU3F3;;chr16:51185172..51185197,-!p1@SALL1!0.90!6.91!SALL1;;chrX:102000987..102001029,+!p3@BHLHB9!0.90!6.91!BHLHB9;;chr2:162273241..162273253,+!p4@TBR1!0.89!6.79!TBR1;;chr2:162273196..162273210,+!p5@TBR1!0.89!6.72!TBR1;;chr21:39870339..39870443,-!p1@ERG!0.89!6.72!ERG;;chrX:106959661..106959763,-!p4@TSC22D3!0.88!20.29!TSC22D3;;chr1:164528340..164528379,+!p4@PBX1!0.88!16.93!PBX1;;chr20:21494654..21494678,-!p2@NKX2-2!0.88!6.66!NKX2-2;;chr8:22550530..22550609,-!p2@EGR3!0.88!6.66!EGR3;;chr6:126112074..126112144,+!p1@NCOA7!0.87!90.37!NCOA7;;chr10:38265517..38265591,-!p1@ZNF25!0.87!25.81!ZNF25;;chr19:53636125..53636178,-!p1@ZNF415!0.87!19.28!ZNF415;;chr1:151032782..151032801,+!p4@MLLT11!0.87!13.32!MLLT11;;chr5:178368186..178368238,+!p1@ZNF454!0.87!11.92!ZNF454;;chr6:126070769..126070801,+!p1@HEY2!0.87!7.48!HEY2;;chr11:8040739..8040815,+!p4@TUB!0.87!6.47!TUB;;chr14:33403648..33403710,+!p3@NPAS3!0.87!6.47!NPAS3;;chr4:57522513..57522548,-!p4@HOPX!0.87!6.40!HOPX;;chr2:2330039..2330072,-!p6@MYT1L!0.87!6.34!MYT1L;;chr8:93107451..93107468,-!p2@RUNX1T1!0.87!6.34!RUNX1T1;;chr13:45010939..45011033,-!p1@TSC22D1!0.86!438.01!TSC22D1;;chr19:49140609..49140643,-!p1@DBP!0.86!37.54!DBP;;chr16:79634624..79634642,-!p1@MAF!0.86!25.68!MAF;;chr2:239148671..2391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APER!0.38!19.28!SCAPER;;chr2:148778590..148778647,+!p2@MBD5!0.38!15.92!MBD5;;chr6:27440837..27440912,-!p1@ZNF184!0.38!9.51!ZNF184;;chr7:148787768..148787825,-!p1@ZNF786!0.38!6.21!ZNF786;;chr19:44860820..44860843,-!p1@ZFP112,p1@ZNF285!0.38!5.26!ZFP112;;chr3:126194815..126194848,-!p2@ZXDC!0.38!4.06!ZXDC;;chr16:89787973..89788001,+!p3@ZNF276!0.38!3.42!ZNF276;;chr15:37391271..37391376,-!p5@MEIS2!0.38!3.30!MEIS2;;chr20:39946400..39946423,-!p3@ZHX3!0.38!3.23!ZHX3;;chr3:114866124..114866149,-!p5@ZBTB20!0.38!2.98!ZBTB20;;chr6:43337124..43337144,-!p4@ZNF318!0.38!2.35!ZNF318;;chr1:120190761..120190782,-!p2@ZNF697!0.38!2.28!ZNF697;;chr1:61924375..61924380,+!p6@NFIA!0.38!2.28!NFIA;;chr7:74072288..74072299,+!p7@GTF2I!0.38!2.09!GTF2I;;chr1:114301755..114301796,-!p3@PHTF1!0.38!1.71!PHTF1;;chr15:31619200..31619211,+!p12@KLF13!0.38!1.59!KLF13;;chr15:61521495..61521506,-!p5@RORA!0.38!1.40!RORA;;chr15:80733538..80733547,+!p23@ARNT2!0.38!1.40!ARNT2;;chr16:30418387..30418422,+!p4@ZNF771!0.38!1.40!ZNF771;;chr16:51185363..51185381,-!p4@SALL1!0.38!1.40!SALL1;;chr2:162273032..162273042,+!p13@TBR1!0.38!1.40!TBR1;;chr2:162273893..162273908,+!p12@TBR1!0.38!1.40!TBR1;;chr2:2330158..2330172,-!p14@MYT1L!0.38!1.40!MYT1L;;chr10:114886551..114886601,+!p11@TCF7L2!0.38!1.40!TCF7L2;;chr10:118897911..118897974,-!p1@VAX1!0.38!1.40!VAX1;;chr12:103351813..103351844,+!p4@ASCL1!0.38!1.40!ASCL1;;chr14:74256981..74256994,-!p16@C14orf43!0.38!1.40!C14orf43;;chr1:214161358..214161377,+!p3@PROX1!0.38!1.40!PROX1;;chr1:216896752..216896778,-!p1@ESRRG!0.38!1.40!ESRRG;;chr7:39125477..39125489,+!p2@POU6F2!0.38!1.40!POU6F2;;chr7:96635178..96635181,+!p1@DLX6!0.38!1.40!DLX6;;chr12:48744642..48744733,-!p1@ZNF641!0.37!13.70!ZNF641;;chr3:141868357..141868393,-!p3@TFDP2!0.37!13.51!TFDP2;;chr2:95831529..95831569,+!p1@ZNF2!0.37!9.20!ZNF2;;chr12:104531823..104531849,-!p5@NFYB!0.37!3.74!NFYB;;chr5:132299572..132299623,-!p6@AFF4!0.37!3.11!AFF4;;chr7:28448995..28449011,+!p4@CREB5!0.37!2.22!CREB5;;chr6:27356527..27356557,+!p2@ZNF391!0.37!2.16!ZNF391;;chr7:4721998..4722013,+!p3@FOXK1!0.37!1.71!FOXK1;;chr3:169381420..169381535,-!p1@MECOM!0.37!1.71!MECOM;;chr11:47237922..47237964,+!p4@DDB2!0.37!1.71!DDB2;;chr10:111985837..111985844,+!p9@MXI1!0.37!1.33!MXI1;;chr14:24020596..24020624,-!p3@ZFHX2!0.37!1.33!ZFHX2;;chr7:64342942..64342975,+!p5@ZNF273!0.37!1.33!ZNF273;;chr15:80696558..80696575,+!p11@ARNT2!0.37!1.33!ARNT2;;chr16:79634581..79634592,-!p4@MAF!0.37!1.33!MAF;;chr18:42260236..42260250,+!p7@SETBP1!0.37!1.33!SETBP1;;chr19:31840278..31840300,-!p5@TSHZ3!0.37!1.33!TSHZ3;;chr19:31840699..31840720,-!p7@TSHZ3!0.37!1.33!TSHZ3;;chr9:2159800..2159825,+!p15@SMARCA2!0.37!1.33!SMARCA2;;chr9:14180778..14180808,-!p15@NFIB!0.37!1.33!NFIB;;chr2:180725954..180725965,-!p11@ZNF385B!0.37!1.33!ZNF385B;;chr12:12764773..12764852,+!p1@CREBL2!0.36!52.00!CREBL2;;chr2:101436564..101436647,+!p1@NPAS2!0.36!42.17!NPAS2;;chr11:118992269..118992334,+!p1@HINFP!0.36!17.25!HINFP;;chr18:53255415..53255491,-!p1@TCF4!0.36!17.06!TCF4;;chr9:20622478..20622525,-!p1@MLLT3!0.36!15.92!MLLT3;;chr19:21264991..21265026,+!p1@ZNF714!0.36!13.19!ZNF714;;chr1:204042233..204042249,+!p1@SOX13!0.36!12.43!SOX13;;chr15:85291544..85291598,+!p2@ZNF592!0.36!12.05!ZNF592;;chr3:44519131..44519186,-!p1@ZNF445!0.36!10.97!ZNF445;;chr6:41703296..41703367,-!p1@TFEB!0.36!9.77!TFEB;;chr19:21512144..21512191,-!p2@ZNF708!0.36!9.01!ZNF708;;chr19:37709076..37709154,+!p1@ZNF383!0.36!6.28!ZNF383;;chr17:41322281..41322328,-!p2@BRCA1!0.36!5.26!BRCA1;;chr19:36980429..36980448,-!p1@ZNF566!0.36!5.20!ZNF566;;chr12:108154925..108154945,-!p2@PRDM4!0.36!4.25!PRDM4;;chr19:52408285..52408310,-!p3@ZNF649!0.36!4.19!ZNF649;;chr9:102584262..102584276,+!p1@NR4A3!0.36!3.87!NR4A3;;chr13:27998854..27998866,+!p3@GTF3A!0.36!3.42!GTF3A;;chr16:30583169..30583200,-!p2@ZNF688!0.36!2.35!ZNF688;;
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000956;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001872;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/parietal%2520lobe%252c%2520adult%252c%2520pool1.CNhs10641.10034-101E7.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/parietal%2520lobe%252c%2520adult%252c%2520pool1.CNhs10641.10034-101E7.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/parietal%2520lobe%252c%2520adult%252c%2520pool1.CNhs10641.10034-101E7.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/parietal%2520lobe%252c%2520adult%252c%2520pool1.CNhs10641.10034-101E7.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/parietal%2520lobe%252c%2520adult%252c%2520pool1.CNhs10641.10034-101E7.hg38.nobarcode.ctss.bed.gz
|id=FF:10034-101E7
|is_a=EFO:0002091;;FF:0010034
|is_obsolete=
|library_id=CNhs10641
|library_id_phase_based=2:CNhs10641
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10034
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10034
|name=parietal lobe, adult, pool1
|namespace=FANTOM5
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|profile_hcage=CNhs10641,LSID658,release008,COMPLETED
|profile_rnaseq=
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|rna_box=101
|rna_catalog_number=Cat:636571
|rna_concentration=1
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
|rna_lot_number=636571
|rna_od260/230=
|rna_od260/280=
|rna_position=E7
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=1.01E+09
|rna_weight_ug=50
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Clontech
|sample_description=
|sample_dev_stage=35-89 years old adult
|sample_disease=normal
|sample_donor(cell lot)=4 pool
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.83950289782376e-295!GO:0005737;cytoplasm;5.46378208702886e-160!GO:0044444;cytoplasmic part;1.97208198089716e-105!GO:0043226;organelle;2.24112494678594e-88!GO:0043229;intracellular organelle;7.34130287112965e-88!GO:0043227;membrane-bound organelle;4.14945110183715e-82!GO:0043231;intracellular membrane-bound organelle;5.79501426219345e-82!GO:0005515;protein binding;1.95750188247447e-63!GO:0044422;organelle part;8.94119129659509e-61!GO:0044446;intracellular organelle part;7.84692857290365e-60!GO:0032991;macromolecular complex;1.19806827550971e-54!GO:0016043;cellular component organization and biogenesis;4.31604018191292e-44!GO:0005739;mitochondrion;9.33068511075291e-42!GO:0031090;organelle membrane;2.84528312234905e-40!GO:0033036;macromolecule localization;9.09523439438236e-40!GO:0015031;protein transport;1.20838430045795e-39!GO:0008104;protein localization;1.18588825344009e-36!GO:0045184;establishment of protein localization;6.94192123699643e-36!GO:0030529;ribonucleoprotein complex;1.09112282964647e-33!GO:0003723;RNA binding;4.27615245176269e-33!GO:0043234;protein complex;1.0879519433853e-31!GO:0044429;mitochondrial part;1.29583336593669e-31!GO:0046907;intracellular transport;3.89656015158512e-31!GO:0051649;establishment of cellular localization;4.87522272061027e-29!GO:0051641;cellular localization;6.9715555418293e-29!GO:0016192;vesicle-mediated transport;4.98403873473386e-28!GO:0043233;organelle lumen;7.73246658212734e-28!GO:0031974;membrane-enclosed lumen;7.73246658212734e-28!GO:0031975;envelope;1.87259367485455e-26!GO:0031967;organelle envelope;2.73500432728142e-26!GO:0019538;protein metabolic process;6.25678884499321e-25!GO:0044428;nuclear part;2.59744781669123e-24!GO:0006886;intracellular protein transport;6.89212029195987e-23!GO:0005740;mitochondrial envelope;6.51976292911396e-22!GO:0005829;cytosol;1.6357792837424e-21!GO:0044260;cellular macromolecule metabolic process;1.74823723541522e-21!GO:0005794;Golgi apparatus;1.74823723541522e-21!GO:0044238;primary metabolic process;1.81433657293383e-21!GO:0031966;mitochondrial membrane;1.87463410285134e-21!GO:0006119;oxidative phosphorylation;4.44807995164183e-21!GO:0016071;mRNA metabolic process;4.68427498113035e-21!GO:0031982;vesicle;5.34109254159376e-21!GO:0044267;cellular protein metabolic process;6.51890231374419e-21!GO:0031410;cytoplasmic vesicle;3.3495717866893e-20!GO:0031988;membrane-bound vesicle;5.90837052130377e-20!GO:0006396;RNA processing;1.33146115868882e-19!GO:0044237;cellular metabolic process;1.50898611647245e-19!GO:0016023;cytoplasmic membrane-bound vesicle;2.79271967453704e-19!GO:0005840;ribosome;5.74330720276926e-19!GO:0008380;RNA splicing;9.41359111533572e-19!GO:0043170;macromolecule metabolic process;1.23357460818043e-18!GO:0019866;organelle inner membrane;1.41844255711547e-18!GO:0005743;mitochondrial inner membrane;3.31688910015994e-18!GO:0006996;organelle organization and biogenesis;1.31206202664156e-17!GO:0006397;mRNA processing;1.78269325228502e-17!GO:0000166;nucleotide binding;3.83383934150536e-16!GO:0006512;ubiquitin cycle;5.24707993335453e-16!GO:0065003;macromolecular complex assembly;6.73438574788207e-16!GO:0009058;biosynthetic process;1.67462782918748e-15!GO:0012505;endomembrane system;1.7794839366006e-15!GO:0006412;translation;2.35281758316194e-15!GO:0043412;biopolymer modification;4.84519623008797e-15!GO:0044455;mitochondrial membrane part;6.02604549974511e-15!GO:0003735;structural constituent of ribosome;6.42002795126529e-15!GO:0031981;nuclear lumen;1.04240388629903e-14!GO:0005746;mitochondrial respiratory chain;1.32787030284355e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.75125996428225e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;2.09178564739435e-14!GO:0006464;protein modification process;2.09178564739435e-14!GO:0016462;pyrophosphatase activity;2.32737643743324e-14!GO:0005634;nucleus;2.71623237346184e-14!GO:0022607;cellular component assembly;3.00078022585275e-14!GO:0006810;transport;4.39870815635065e-14!GO:0043687;post-translational protein modification;5.14849094880815e-14!GO:0016874;ligase activity;8.57524745439663e-14!GO:0045045;secretory pathway;1.46584120677251e-13!GO:0017111;nucleoside-triphosphatase activity;1.51456058740065e-13!GO:0048770;pigment granule;2.16298210470542e-13!GO:0042470;melanosome;2.16298210470542e-13!GO:0007264;small GTPase mediated signal transduction;2.38915505946161e-13!GO:0050136;NADH dehydrogenase (quinone) activity;2.86113940664353e-13!GO:0003954;NADH dehydrogenase activity;2.86113940664353e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.86113940664353e-13!GO:0030135;coated vesicle;4.41643648898339e-13!GO:0032553;ribonucleotide binding;6.40897851372412e-13!GO:0032555;purine ribonucleotide binding;6.40897851372412e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.68215901470583e-13!GO:0005681;spliceosome;1.35407668957818e-12!GO:0009059;macromolecule biosynthetic process;5.03544885116018e-12!GO:0006457;protein folding;5.03544885116018e-12!GO:0033279;ribosomal subunit;5.26640059207436e-12!GO:0044249;cellular biosynthetic process;5.71205160097957e-12!GO:0017076;purine nucleotide binding;5.73375187688229e-12!GO:0048193;Golgi vesicle transport;5.82181420126115e-12!GO:0031980;mitochondrial lumen;5.89880616553827e-12!GO:0005759;mitochondrial matrix;5.89880616553827e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.62596227553476e-11!GO:0042773;ATP synthesis coupled electron transport;1.62596227553476e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.63055479052968e-11!GO:0045271;respiratory chain complex I;1.63055479052968e-11!GO:0005747;mitochondrial respiratory chain complex I;1.63055479052968e-11!GO:0008092;cytoskeletal protein binding;1.83978936640197e-11!GO:0051234;establishment of localization;2.66672490012344e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.86754299571304e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.92654208704463e-11!GO:0030695;GTPase regulator activity;5.5174134015012e-11!GO:0007399;nervous system development;5.67169873780592e-11!GO:0051179;localization;5.82684080860269e-11!GO:0019829;cation-transporting ATPase activity;8.91918767704088e-11!GO:0044431;Golgi apparatus part;1.1196998020308e-10!GO:0005768;endosome;1.12375870325348e-10!GO:0005083;small GTPase regulator activity;1.51869919558118e-10!GO:0043005;neuron projection;1.52543591095543e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.77031913771849e-10!GO:0006793;phosphorus metabolic process;1.95904915705751e-10!GO:0006796;phosphate metabolic process;1.95904915705751e-10!GO:0043283;biopolymer metabolic process;2.59482515104568e-10!GO:0005783;endoplasmic reticulum;2.78033802034729e-10!GO:0022618;protein-RNA complex assembly;4.87122158259117e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;7.62109524560744e-10!GO:0003924;GTPase activity;8.01470368155032e-10!GO:0006511;ubiquitin-dependent protein catabolic process;9.09434504822142e-10!GO:0005654;nucleoplasm;1.2241511815387e-09!GO:0051082;unfolded protein binding;1.29601174110377e-09!GO:0019941;modification-dependent protein catabolic process;1.30332354678782e-09!GO:0043632;modification-dependent macromolecule catabolic process;1.30332354678782e-09!GO:0006605;protein targeting;1.45916400127783e-09!GO:0044257;cellular protein catabolic process;1.70409638309905e-09!GO:0008135;translation factor activity, nucleic acid binding;2.07289644139605e-09!GO:0030136;clathrin-coated vesicle;2.15625611075701e-09!GO:0008565;protein transporter activity;2.51088049831518e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.9711628459704e-09!GO:0008639;small protein conjugating enzyme activity;3.41569431383127e-09!GO:0032940;secretion by cell;3.90346144545101e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.44513967528517e-09!GO:0044445;cytosolic part;4.78365201902311e-09!GO:0044265;cellular macromolecule catabolic process;6.03723678976287e-09!GO:0004842;ubiquitin-protein ligase activity;6.16845547644491e-09!GO:0019787;small conjugating protein ligase activity;6.86456919997242e-09!GO:0005525;GTP binding;6.86456919997242e-09!GO:0044451;nucleoplasm part;7.14222310678398e-09!GO:0007010;cytoskeleton organization and biogenesis;8.4231343956156e-09!GO:0016044;membrane organization and biogenesis;8.43189759649693e-09!GO:0051186;cofactor metabolic process;8.48239614707457e-09!GO:0015986;ATP synthesis coupled proton transport;8.5172624893259e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.5172624893259e-09!GO:0000502;proteasome complex (sensu Eukaryota);1.38392657785497e-08!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.24890101805027e-08!GO:0000139;Golgi membrane;3.31565658346008e-08!GO:0006461;protein complex assembly;3.66293048421213e-08!GO:0008134;transcription factor binding;3.91731718034422e-08!GO:0044248;cellular catabolic process;4.76078726139136e-08!GO:0030163;protein catabolic process;7.35277528224602e-08!GO:0043228;non-membrane-bound organelle;8.65576464265853e-08!GO:0043232;intracellular non-membrane-bound organelle;8.65576464265853e-08!GO:0016881;acid-amino acid ligase activity;9.40820019014757e-08!GO:0043285;biopolymer catabolic process;9.64415722278359e-08!GO:0009060;aerobic respiration;9.64415722278359e-08!GO:0032559;adenyl ribonucleotide binding;1.3537452457909e-07!GO:0046034;ATP metabolic process;1.39109805227166e-07!GO:0045333;cellular respiration;1.45902003509076e-07!GO:0015631;tubulin binding;1.6505280763871e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.38306229979017e-07!GO:0048475;coated membrane;2.38306229979017e-07!GO:0030117;membrane coat;2.38306229979017e-07!GO:0032561;guanyl ribonucleotide binding;2.38345170788085e-07!GO:0019001;guanyl nucleotide binding;2.38345170788085e-07!GO:0030036;actin cytoskeleton organization and biogenesis;2.88395688365065e-07!GO:0015935;small ribosomal subunit;2.95987821642744e-07!GO:0016310;phosphorylation;3.14494866324394e-07!GO:0007242;intracellular signaling cascade;3.82210113056629e-07!GO:0044440;endosomal part;3.82210113056629e-07!GO:0010008;endosome membrane;3.82210113056629e-07!GO:0006163;purine nucleotide metabolic process;4.27710456090991e-07!GO:0009141;nucleoside triphosphate metabolic process;4.36105004210529e-07!GO:0005524;ATP binding;5.02611768455304e-07!GO:0019717;synaptosome;5.32158037599325e-07!GO:0006754;ATP biosynthetic process;5.32158037599325e-07!GO:0006753;nucleoside phosphate metabolic process;5.32158037599325e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.35055324417625e-07!GO:0009144;purine nucleoside triphosphate metabolic process;5.35055324417625e-07!GO:0009057;macromolecule catabolic process;5.56805225288396e-07!GO:0048471;perinuclear region of cytoplasm;5.57076536158493e-07!GO:0009150;purine ribonucleotide metabolic process;5.74947533928284e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.80062708172508e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.53177570052988e-07!GO:0009199;ribonucleoside triphosphate metabolic process;6.62120553363123e-07!GO:0006446;regulation of translational initiation;6.81950813575159e-07!GO:0006413;translational initiation;6.81950813575159e-07!GO:0030554;adenyl nucleotide binding;8.76770817141638e-07!GO:0016469;proton-transporting two-sector ATPase complex;9.18021588001309e-07!GO:0030029;actin filament-based process;9.88462690200276e-07!GO:0006164;purine nucleotide biosynthetic process;9.9232615413435e-07!GO:0003743;translation initiation factor activity;1.0344332926039e-06!GO:0005905;coated pit;1.03835326017137e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.10225181205613e-06!GO:0008287;protein serine/threonine phosphatase complex;1.1088487926624e-06!GO:0006732;coenzyme metabolic process;1.222866108533e-06!GO:0007265;Ras protein signal transduction;1.26937218821178e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.30064563718663e-06!GO:0009259;ribonucleotide metabolic process;1.35092699645799e-06!GO:0030425;dendrite;1.89974213689112e-06!GO:0006099;tricarboxylic acid cycle;1.9611684677083e-06!GO:0046356;acetyl-CoA catabolic process;1.9611684677083e-06!GO:0044432;endoplasmic reticulum part;2.18855315495127e-06!GO:0000398;nuclear mRNA splicing, via spliceosome;2.27436910530059e-06!GO:0000375;RNA splicing, via transesterification reactions;2.27436910530059e-06!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.27436910530059e-06!GO:0006913;nucleocytoplasmic transport;2.62636935750165e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.65479274470205e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.65479274470205e-06!GO:0031965;nuclear membrane;2.7967130724107e-06!GO:0016604;nuclear body;3.17559280664866e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.37289646417274e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.37289646417274e-06!GO:0051056;regulation of small GTPase mediated signal transduction;3.63265021390972e-06!GO:0005761;mitochondrial ribosome;3.63265021390972e-06!GO:0000313;organellar ribosome;3.63265021390972e-06!GO:0019226;transmission of nerve impulse;3.64347181081828e-06!GO:0019899;enzyme binding;3.68515708538167e-06!GO:0051169;nuclear transport;3.80256962061503e-06!GO:0003779;actin binding;4.24983035256056e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.56470852021252e-06!GO:0008021;synaptic vesicle;4.66057909621743e-06!GO:0005798;Golgi-associated vesicle;4.66767996324123e-06!GO:0015630;microtubule cytoskeleton;4.97846844112391e-06!GO:0005770;late endosome;5.29320053252782e-06!GO:0016607;nuclear speck;5.68154266356088e-06!GO:0009109;coenzyme catabolic process;5.99308033315497e-06!GO:0009260;ribonucleotide biosynthetic process;6.34208102936767e-06!GO:0006897;endocytosis;6.5926467115005e-06!GO:0010324;membrane invagination;6.5926467115005e-06!GO:0006084;acetyl-CoA metabolic process;7.16668918057327e-06!GO:0009055;electron carrier activity;7.38595411923551e-06!GO:0010467;gene expression;8.40557622963142e-06!GO:0031252;leading edge;1.00623139480286e-05!GO:0005635;nuclear envelope;1.10304617296221e-05!GO:0030120;vesicle coat;1.15050868095791e-05!GO:0030662;coated vesicle membrane;1.15050868095791e-05!GO:0045259;proton-transporting ATP synthase complex;1.2445477567375e-05!GO:0015934;large ribosomal subunit;1.45839537664232e-05!GO:0005769;early endosome;1.63076005597705e-05!GO:0042623;ATPase activity, coupled;1.69768203627669e-05!GO:0022890;inorganic cation transmembrane transporter activity;1.7207697595851e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.45677089623979e-05!GO:0005874;microtubule;2.46946914203665e-05!GO:0016887;ATPase activity;2.49335715191619e-05!GO:0005789;endoplasmic reticulum membrane;2.59321111893851e-05!GO:0051187;cofactor catabolic process;3.00735933046099e-05!GO:0008047;enzyme activator activity;3.70128854259267e-05!GO:0032446;protein modification by small protein conjugation;4.18739230410336e-05!GO:0005096;GTPase activator activity;5.39385933419579e-05!GO:0030133;transport vesicle;5.49023214943467e-05!GO:0008654;phospholipid biosynthetic process;5.50290692784174e-05!GO:0016567;protein ubiquitination;5.50290692784174e-05!GO:0005773;vacuole;6.51983715172823e-05!GO:0008017;microtubule binding;6.65421139086619e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;6.96492703223376e-05!GO:0015399;primary active transmembrane transporter activity;6.96492703223376e-05!GO:0005730;nucleolus;9.01867078054124e-05!GO:0017038;protein import;9.09955220973617e-05!GO:0046467;membrane lipid biosynthetic process;0.000104529331746678!GO:0051128;regulation of cellular component organization and biogenesis;0.000106798855321329!GO:0016311;dephosphorylation;0.000119443408427991!GO:0048489;synaptic vesicle transport;0.000126771125645825!GO:0005085;guanyl-nucleotide exchange factor activity;0.000131198930933834!GO:0043492;ATPase activity, coupled to movement of substances;0.000132737715059423!GO:0006650;glycerophospholipid metabolic process;0.000136776223359482!GO:0009056;catabolic process;0.000141763300758621!GO:0016301;kinase activity;0.000145814586321904!GO:0006888;ER to Golgi vesicle-mediated transport;0.000148545588200537!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);0.00015329469929878!GO:0046578;regulation of Ras protein signal transduction;0.000159290506744352!GO:0004721;phosphoprotein phosphatase activity;0.000167665136952949!GO:0003712;transcription cofactor activity;0.000172850531422466!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000178664583800192!GO:0030118;clathrin coat;0.00018358284990378!GO:0007268;synaptic transmission;0.000206987521101772!GO:0000902;cell morphogenesis;0.00022337604621023!GO:0032989;cellular structure morphogenesis;0.00022337604621023!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000230147511755376!GO:0006643;membrane lipid metabolic process;0.000239034362280216!GO:0006613;cotranslational protein targeting to membrane;0.000253240651880375!GO:0016791;phosphoric monoester hydrolase activity;0.000254776023185321!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000306916595878251!GO:0048523;negative regulation of cellular process;0.000320366259351307!GO:0051188;cofactor biosynthetic process;0.000327405194297311!GO:0051246;regulation of protein metabolic process;0.000354840659828844!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);0.000358706790068293!GO:0000151;ubiquitin ligase complex;0.000374241036847051!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000378190089367193!GO:0006470;protein amino acid dephosphorylation;0.000379363271268801!GO:0015980;energy derivation by oxidation of organic compounds;0.000382125592369398!GO:0007269;neurotransmitter secretion;0.000394996769735583!GO:0005643;nuclear pore;0.000414674667696383!GO:0005793;ER-Golgi intermediate compartment;0.00043178855453746!GO:0030027;lamellipodium;0.000443680578224246!GO:0005741;mitochondrial outer membrane;0.000476597236446735!GO:0006752;group transfer coenzyme metabolic process;0.000487985277116444!GO:0044453;nuclear membrane part;0.000493834039909679!GO:0006403;RNA localization;0.000506546260231873!GO:0016568;chromatin modification;0.000515878178226668!GO:0019902;phosphatase binding;0.000564560988763276!GO:0007019;microtubule depolymerization;0.000566457817835597!GO:0030384;phosphoinositide metabolic process;0.000617123460941309!GO:0050657;nucleic acid transport;0.000620978558711274!GO:0051236;establishment of RNA localization;0.000620978558711274!GO:0050658;RNA transport;0.000620978558711274!GO:0019208;phosphatase regulator activity;0.000698228980238327!GO:0000159;protein phosphatase type 2A complex;0.000702798521043723!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000719726024680729!GO:0031072;heat shock protein binding;0.000732253641062786!GO:0016740;transferase activity;0.000735462669334406!GO:0000245;spliceosome assembly;0.000738127341191533!GO:0000323;lytic vacuole;0.000781044911547466!GO:0005764;lysosome;0.000781044911547466!GO:0016197;endosome transport;0.000806835223230992!GO:0004674;protein serine/threonine kinase activity;0.000829300917575127!GO:0008601;protein phosphatase type 2A regulator activity;0.00103703459998676!GO:0019867;outer membrane;0.00104113635227876!GO:0007266;Rho protein signal transduction;0.00105630593850814!GO:0031968;organelle outer membrane;0.00107302266841034!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00107773263588162!GO:0045055;regulated secretory pathway;0.00108989620000828!GO:0030054;cell junction;0.0011246465181181!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00114367175246756!GO:0004722;protein serine/threonine phosphatase activity;0.00118676629479297!GO:0045786;negative regulation of progression through cell cycle;0.00122546868402901!GO:0043623;cellular protein complex assembly;0.00127720961385482!GO:0005516;calmodulin binding;0.00133132007103422!GO:0003729;mRNA binding;0.00136266500987267!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00145514624310091!GO:0030427;site of polarized growth;0.00154862254883907!GO:0006325;establishment and/or maintenance of chromatin architecture;0.0015487882377043!GO:0030424;axon;0.00155647911761264!GO:0001505;regulation of neurotransmitter levels;0.00157100784472337!GO:0050767;regulation of neurogenesis;0.00162424096874362!GO:0030426;growth cone;0.00163118717527026!GO:0046488;phosphatidylinositol metabolic process;0.00184613742617064!GO:0009108;coenzyme biosynthetic process;0.00188910288685753!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00195981336614009!GO:0031114;regulation of microtubule depolymerization;0.00195981336614009!GO:0007026;negative regulation of microtubule depolymerization;0.00195981336614009!GO:0048487;beta-tubulin binding;0.00196235827431932!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00196535292096859!GO:0006891;intra-Golgi vesicle-mediated transport;0.00198346807529256!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00199630195442884!GO:0005938;cell cortex;0.00203542066369408!GO:0031902;late endosome membrane;0.00203838643681219!GO:0009966;regulation of signal transduction;0.0020788440810194!GO:0048167;regulation of synaptic plasticity;0.0020788440810194!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00211907809009137!GO:0043209;myelin sheath;0.00218346111345845!GO:0019888;protein phosphatase regulator activity;0.00219517370360418!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00222488991846512!GO:0004812;aminoacyl-tRNA ligase activity;0.00222488991846512!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00222488991846512!GO:0012506;vesicle membrane;0.00227285769346532!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00256550208193799!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00256550208193799!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00256550208193799!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00260262042042213!GO:0048519;negative regulation of biological process;0.00260526929160856!GO:0016050;vesicle organization and biogenesis;0.00264590243595053!GO:0005875;microtubule associated complex;0.00271251569874056!GO:0016126;sterol biosynthetic process;0.00288612299875346!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00303142135976769!GO:0003724;RNA helicase activity;0.00303956144437036!GO:0030660;Golgi-associated vesicle membrane;0.00308087598429542!GO:0051087;chaperone binding;0.00308087598429542!GO:0006904;vesicle docking during exocytosis;0.0031174038492907!GO:0005869;dynactin complex;0.00312954953914281!GO:0006606;protein import into nucleus;0.00317497245094504!GO:0005774;vacuolar membrane;0.00325109878331433!GO:0043038;amino acid activation;0.00332843039603459!GO:0006418;tRNA aminoacylation for protein translation;0.00332843039603459!GO:0043039;tRNA aminoacylation;0.00332843039603459!GO:0022406;membrane docking;0.00336554376900677!GO:0048278;vesicle docking;0.00336554376900677!GO:0006612;protein targeting to membrane;0.003379079640832!GO:0051170;nuclear import;0.00339807680165324!GO:0008026;ATP-dependent helicase activity;0.00350033435750088!GO:0032011;ARF protein signal transduction;0.0036393989812166!GO:0032012;regulation of ARF protein signal transduction;0.0036393989812166!GO:0009117;nucleotide metabolic process;0.0036393989812166!GO:0042578;phosphoric ester hydrolase activity;0.00377482169579188!GO:0006665;sphingolipid metabolic process;0.00379856529697519!GO:0008154;actin polymerization and/or depolymerization;0.00383749054447185!GO:0007272;ensheathment of neurons;0.00383749054447185!GO:0008366;axon ensheathment;0.00383749054447185!GO:0006892;post-Golgi vesicle-mediated transport;0.00384497282329417!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00386410626072616!GO:0004667;prostaglandin-D synthase activity;0.00386410626072616!GO:0050802;circadian sleep/wake cycle, sleep;0.00386410626072616!GO:0022410;circadian sleep/wake cycle process;0.00386410626072616!GO:0042749;regulation of circadian sleep/wake cycle;0.00386410626072616!GO:0008610;lipid biosynthetic process;0.0038801713295809!GO:0016564;transcription repressor activity;0.0038801713295809!GO:0006644;phospholipid metabolic process;0.00389347107761587!GO:0003697;single-stranded DNA binding;0.00392515449566596!GO:0048699;generation of neurons;0.00419463722727657!GO:0043566;structure-specific DNA binding;0.00443673732035368!GO:0030658;transport vesicle membrane;0.00452665974497755!GO:0044433;cytoplasmic vesicle part;0.00464566307608099!GO:0005048;signal sequence binding;0.00470390320614664!GO:0050803;regulation of synapse structure and activity;0.0047869712744107!GO:0006323;DNA packaging;0.00487417731472434!GO:0065002;intracellular protein transport across a membrane;0.00506282677723376!GO:0022008;neurogenesis;0.00532140002694483!GO:0015629;actin cytoskeleton;0.0053498481826084!GO:0046474;glycerophospholipid biosynthetic process;0.00545890921064881!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00550114529034517!GO:0055083;monovalent inorganic anion homeostasis;0.00550114529034517!GO:0055064;chloride ion homeostasis;0.00550114529034517!GO:0030644;cellular chloride ion homeostasis;0.00550114529034517!GO:0019903;protein phosphatase binding;0.0056422682076862!GO:0043087;regulation of GTPase activity;0.00584411039673234!GO:0051168;nuclear export;0.00584411039673234!GO:0051028;mRNA transport;0.00599381905832649!GO:0030258;lipid modification;0.00610668202166365!GO:0001508;regulation of action potential;0.00611909047096645!GO:0031901;early endosome membrane;0.00611909047096645!GO:0051427;hormone receptor binding;0.00699026788833641!GO:0030182;neuron differentiation;0.00701486365909808!GO:0050839;cell adhesion molecule binding;0.00709807992959632!GO:0051261;protein depolymerization;0.00715356611745128!GO:0003714;transcription corepressor activity;0.00715356611745128!GO:0050811;GABA receptor binding;0.00718589946473296!GO:0005099;Ras GTPase activator activity;0.00726281794045117!GO:0044448;cell cortex part;0.00733425666947771!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.00821011909041397!GO:0019198;transmembrane receptor protein phosphatase activity;0.00821011909041397!GO:0030867;rough endoplasmic reticulum membrane;0.00861552520801795!GO:0006414;translational elongation;0.00861552520801795!GO:0006607;NLS-bearing substrate import into nucleus;0.00866779062492612!GO:0030132;clathrin coat of coated pit;0.00869498265456205!GO:0051920;peroxiredoxin activity;0.00872020487206072!GO:0000287;magnesium ion binding;0.00890439290969872!GO:0007017;microtubule-based process;0.00914668573065216!GO:0001578;microtubule bundle formation;0.0100015478654693!GO:0005765;lysosomal membrane;0.0100497059149149!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0100749251897777!GO:0019887;protein kinase regulator activity;0.0106400494460771!GO:0031109;microtubule polymerization or depolymerization;0.010658188522193!GO:0051540;metal cluster binding;0.0110364060943957!GO:0051536;iron-sulfur cluster binding;0.0110364060943957!GO:0005791;rough endoplasmic reticulum;0.0110364060943957!GO:0048500;signal recognition particle;0.0112996640574345!GO:0030137;COPI-coated vesicle;0.0113995702935096!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0117682329499571!GO:0035257;nuclear hormone receptor binding;0.0118100789427894!GO:0043021;ribonucleoprotein binding;0.0119246066862325!GO:0005839;proteasome core complex (sensu Eukaryota);0.0120204799228754!GO:0044437;vacuolar part;0.0121353792248431!GO:0004386;helicase activity;0.0122203422603717!GO:0003746;translation elongation factor activity;0.0123696914266613!GO:0006695;cholesterol biosynthetic process;0.0128854157806531!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0128879854338541!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0128879854338541!GO:0030659;cytoplasmic vesicle membrane;0.0130621497388512!GO:0030125;clathrin vesicle coat;0.0140416776549282!GO:0030665;clathrin coated vesicle membrane;0.0140416776549282!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.0140945790641418!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.014571220970047!GO:0030532;small nuclear ribonucleoprotein complex;0.0146259219122953!GO:0044456;synapse part;0.0151421962484695!GO:0030041;actin filament polymerization;0.0152197562320428!GO:0035035;histone acetyltransferase binding;0.0160442841114985!GO:0007034;vacuolar transport;0.016141432781253!GO:0019904;protein domain specific binding;0.0161456013384263!GO:0008250;oligosaccharyl transferase complex;0.016263270491327!GO:0006402;mRNA catabolic process;0.0163347147801378!GO:0001726;ruffle;0.0164450625868118!GO:0006916;anti-apoptosis;0.016596867054542!GO:0033673;negative regulation of kinase activity;0.0166089382961946!GO:0006469;negative regulation of protein kinase activity;0.0166089382961946!GO:0003713;transcription coactivator activity;0.016703296387639!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0167655251110875!GO:0009165;nucleotide biosynthetic process;0.0170127616787264!GO:0006818;hydrogen transport;0.0170369951330946!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0171033816307232!GO:0005092;GDP-dissociation inhibitor activity;0.0171327383407301!GO:0000314;organellar small ribosomal subunit;0.017192017854468!GO:0005763;mitochondrial small ribosomal subunit;0.017192017854468!GO:0008186;RNA-dependent ATPase activity;0.0174832669119558!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0176889105076312!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0177008695376778!GO:0051287;NAD binding;0.0177235755950845!GO:0030742;GTP-dependent protein binding;0.0178777490450101!GO:0042995;cell projection;0.0179660134932674!GO:0046930;pore complex;0.0182516784373278!GO:0046489;phosphoinositide biosynthetic process;0.0189796013156605!GO:0046839;phospholipid dephosphorylation;0.0196167472172152!GO:0030119;AP-type membrane coat adaptor complex;0.0199919824419825!GO:0008139;nuclear localization sequence binding;0.0202321998728906!GO:0048666;neuron development;0.0202485159479771!GO:0030030;cell projection organization and biogenesis;0.0202485159479771!GO:0048858;cell projection morphogenesis;0.0202485159479771!GO:0032990;cell part morphogenesis;0.0202485159479771!GO:0008180;signalosome;0.0203771552304732!GO:0006672;ceramide metabolic process;0.0206116623050519!GO:0042254;ribosome biogenesis and assembly;0.0206119844665824!GO:0008286;insulin receptor signaling pathway;0.0207550135274829!GO:0045296;cadherin binding;0.0209123258249108!GO:0043407;negative regulation of MAP kinase activity;0.0209493398532692!GO:0009892;negative regulation of metabolic process;0.0209493398532692!GO:0005813;centrosome;0.0215425279614615!GO:0005100;Rho GTPase activator activity;0.0217165202796952!GO:0007611;learning and/or memory;0.0221959840032946!GO:0006661;phosphatidylinositol biosynthetic process;0.0227080071688949!GO:0000904;cellular morphogenesis during differentiation;0.0227877389940846!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0230532053649161!GO:0000059;protein import into nucleus, docking;0.0232159322475011!GO:0005868;cytoplasmic dynein complex;0.023356857089231!GO:0015992;proton transport;0.0233653126680125!GO:0006887;exocytosis;0.0234506891888793!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0234506891888793!GO:0035258;steroid hormone receptor binding;0.023646394884075!GO:0030131;clathrin adaptor complex;0.0236889240846738!GO:0004672;protein kinase activity;0.0239489540203203!GO:0019207;kinase regulator activity;0.0242030218323183!GO:0035023;regulation of Rho protein signal transduction;0.024236110995931!GO:0019894;kinesin binding;0.0247165747718579!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0247165747718579!GO:0045047;protein targeting to ER;0.0247165747718579!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.024728727168725!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0249182070388444!GO:0008219;cell death;0.0250122992607044!GO:0016265;death;0.0250122992607044!GO:0046519;sphingoid metabolic process;0.0250367993460633!GO:0005885;Arp2/3 protein complex;0.0252184270904915!GO:0000062;acyl-CoA binding;0.0254464615352401!GO:0051348;negative regulation of transferase activity;0.0256223958992019!GO:0006595;polyamine metabolic process;0.0257539433696802!GO:0048667;neuron morphogenesis during differentiation;0.0257539433696802!GO:0048812;neurite morphogenesis;0.0257539433696802!GO:0031124;mRNA 3'-end processing;0.0259669730516294!GO:0006366;transcription from RNA polymerase II promoter;0.0260362410222939!GO:0043681;protein import into mitochondrion;0.0264411864366213!GO:0031371;ubiquitin conjugating enzyme complex;0.0266896751932716!GO:0048168;regulation of neuronal synaptic plasticity;0.0267591036903343!GO:0008088;axon cargo transport;0.0268944420718215!GO:0016579;protein deubiquitination;0.0270028581048211!GO:0043025;cell soma;0.0280232985079618!GO:0031301;integral to organelle membrane;0.0283007364728463!GO:0004683;calmodulin-dependent protein kinase activity;0.0283007364728463!GO:0051252;regulation of RNA metabolic process;0.0287735540468847!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0291035736042676!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0295921722249171!GO:0006259;DNA metabolic process;0.0297248238778044!GO:0042552;myelination;0.0298508878830543!GO:0031110;regulation of microtubule polymerization or depolymerization;0.0299304468379616!GO:0000209;protein polyubiquitination;0.0305719131082999!GO:0004298;threonine endopeptidase activity;0.0313478279399193!GO:0008361;regulation of cell size;0.0314480395028551!GO:0016079;synaptic vesicle exocytosis;0.0315163753286397!GO:0031175;neurite development;0.0320665108516068!GO:0005952;cAMP-dependent protein kinase complex;0.0332433578336949!GO:0042670;retinal cone cell differentiation;0.0337015489956666!GO:0051281;positive regulation of release of sequestered calcium ion into cytosol;0.0337015489956666!GO:0046549;retinal cone cell development;0.0337015489956666!GO:0043069;negative regulation of programmed cell death;0.0337406433162224!GO:0048468;cell development;0.0341589365744451!GO:0051726;regulation of cell cycle;0.034631293702152!GO:0008090;retrograde axon cargo transport;0.034631293702152!GO:0033596;TSC1-TSC2 complex;0.034631293702152!GO:0033693;neurofilament bundle assembly;0.034631293702152!GO:0000096;sulfur amino acid metabolic process;0.0347835999170482!GO:0009066;aspartate family amino acid metabolic process;0.0347835999170482!GO:0019911;structural constituent of myelin sheath;0.0352135274462139!GO:0006611;protein export from nucleus;0.0354956057627146!GO:0051539;4 iron, 4 sulfur cluster binding;0.0360914026031899!GO:0008312;7S RNA binding;0.0372159643024803!GO:0043066;negative regulation of apoptosis;0.0376372536935934!GO:0043488;regulation of mRNA stability;0.0378788737138964!GO:0043487;regulation of RNA stability;0.0378788737138964!GO:0004004;ATP-dependent RNA helicase activity;0.0381607275363637!GO:0012501;programmed cell death;0.0381945756888978!GO:0030663;COPI coated vesicle membrane;0.0383902298331739!GO:0030126;COPI vesicle coat;0.0383902298331739!GO:0065009;regulation of a molecular function;0.0386462811954743!GO:0019783;small conjugating protein-specific protease activity;0.0389223329408649!GO:0008022;protein C-terminus binding;0.0396188101634222!GO:0007041;lysosomal transport;0.0396188101634222!GO:0006915;apoptosis;0.0399488275072322!GO:0016859;cis-trans isomerase activity;0.041237621449011!GO:0033130;acetylcholine receptor binding;0.041983202901317!GO:0004576;oligosaccharyl transferase activity;0.0424309984104926!GO:0005815;microtubule organizing center;0.0424309984104926!GO:0003711;transcription elongation regulator activity;0.0431599934344478!GO:0030911;TPR domain binding;0.0434673443530936!GO:0007005;mitochondrion organization and biogenesis;0.0437020860721663!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0449996458218424!GO:0000188;inactivation of MAPK activity;0.0452962958816748!GO:0030140;trans-Golgi network transport vesicle;0.0453082218953459!GO:0032318;regulation of Ras GTPase activity;0.0469779201738996!GO:0016049;cell growth;0.0470527117934819!GO:0016615;malate dehydrogenase activity;0.0470566793253842!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0474777861315712!GO:0033043;regulation of organelle organization and biogenesis;0.0474777861315712!GO:0016363;nuclear matrix;0.0477502844131921!GO:0042802;identical protein binding;0.047819507632036!GO:0004843;ubiquitin-specific protease activity;0.0483948131669707!GO:0000074;regulation of progression through cell cycle;0.0490759368709899
|sample_id=10034
|sample_note=
|sample_sex=mixed
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=parietal lobe
|top_motifs=REST:4.41168678832;NHLH1,2:4.25517519604;EGR1..3:3.92876270155;ZFP161:3.76169358698;MYFfamily:3.60437100948;MTE{core}:3.53849757977;PRRX1,2:3.51326076347;ATF2:3.49812436554;AHR_ARNT_ARNT2:3.48592004178;MED-1{core}:3.47905873424;ZBTB6:3.44382195842;TFAP2B:3.42242803931;MTF1:3.22040687109;PAX5:3.08787345291;RREB1:3.07612647644;HIC1:3.07483378092;CUX2:2.96544596252;GTF2I:2.90191601222;RFX1:2.75365539521;SOX5:2.71677109408;MZF1:2.61137575671;SOX2:2.5856260554;BREu{core}:2.48865825882;SMAD1..7,9:2.46133969591;PRDM1:2.43835579676;JUN:2.42867582031;SOX{8,9,10}:2.35782211116;DBP:2.33593622078;LMO2:2.31156795754;PATZ1:2.30937102617;TGIF1:2.25134217553;POU6F1:2.24647813487;OCT4_SOX2{dimer}:2.20567145221;MAZ:2.1801250694;NFIX:2.15225281337;SOX17:2.09919533285;NKX3-2:2.07554895641;GFI1B:2.07280045774;TFDP1:2.05363050984;NANOG:2.01102442704;ESRRA:2.01102348722;LEF1_TCF7_TCF7L1,2:1.94879304064;FOXM1:1.93608314969;NKX2-3_NKX2-5:1.93416721728;HOXA9_MEIS1:1.92775816778;MAFB:1.87147554271;GCM1,2:1.84692548569;EBF1:1.79474976298;NRF1:1.7612227966;PAX6:1.74460116429;POU5F1:1.69658677678;ARID5B:1.69510728003;FOXQ1:1.576795634;XBP1:1.50892124111;RFX2..5_RFXANK_RFXAP:1.5086768784;FOX{F1,F2,J1}:1.47429454734;GTF2A1,2:1.45593052471;KLF4:1.45079784164;ZNF238:1.44359629908;HOX{A4,D4}:1.44076335316;SP1:1.40339913432;EP300:1.34326471059;MYOD1:1.34013975783;RORA:1.2945057974;GATA4:1.26109076712;SREBF1,2:1.25589178698;NFIL3:1.24875739965;CDC5L:1.21624978907;ZNF423:1.19226479077;TFAP2{A,C}:1.14631102381;HMGA1,2:1.08994644159;RBPJ:0.999214715174;HBP1_HMGB_SSRP1_UBTF:0.982981751647;ZNF143:0.961537747765;HAND1,2:0.946687991901;MEF2{A,B,C,D}:0.936443538248;POU3F1..4:0.931171471198;CREB1:0.876614243761;SPZ1:0.859095129256;TLX1..3_NFIC{dimer}:0.846497773;T:0.80938910108;ZEB1:0.782455168053;ADNP_IRX_SIX_ZHX:0.71095768349;CRX:0.706959381303;TLX2:0.678274693812;HMX1:0.669014438893;ALX1:0.667974012725;XCPE1{core}:0.618233675446;FOXP3:0.575905712296;TBX4,5:0.539730613302;AR:0.527561633712;YY1:0.488876869754;FOXN1:0.483179279054;ZIC1..3:0.48031605914;FOX{D1,D2}:0.472391038941;STAT1,3:0.451749932822;ATF5_CREB3:0.43554900708;ZNF384:0.417825608225;ONECUT1,2:0.400387835166;GZF1:0.362867649254;GFI1:0.357883943515;BPTF:0.330405537372;PBX1:0.324469310075;ATF4:0.31063650743;bHLH_family:0.307466833858;FOXP1:0.298321511593;PAX2:0.221491391972;NR3C1:0.203308427551;MYBL2:0.155134016689;NFY{A,B,C}:0.131319466322;IKZF1:0.101717208193;NFE2L2:0.0948280700365;NFATC1..3:0.0360393387965;NANOG{mouse}:0.0336918713473;PAX3,7:0.00692052204958;VSX1,2:-0.00456736015595;PAX4:-0.0614523113714;HOX{A6,A7,B6,B7}:-0.0714852697945;NKX6-1,2:-0.0769103991092;FOX{I1,J2}:-0.110418710312;IRF7:-0.182074830952;ZNF148:-0.18418197961;NR5A1,2:-0.194304243484;PDX1:-0.196831752723;IKZF2:-0.200908737183;PAX1,9:-0.210362811715;SNAI1..3:-0.213700385153;TEF:-0.233490638146;NFE2:-0.308999609474;FOXA2:-0.309050071654;LHX3,4:-0.367490385212;NFE2L1:-0.382413701621;POU1F1:-0.435063480408;TFCP2:-0.465051659358;TFAP4:-0.467500517678;GATA6:-0.483631815828;SPI1:-0.491241946822;STAT2,4,6:-0.516464599398;TOPORS:-0.517645691286;FOXL1:-0.540882832072;FOXO1,3,4:-0.541752418491;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.572420993544;IRF1,2:-0.580534638613;NR1H4:-0.621493252298;CEBPA,B_DDIT3:-0.623120200912;UFEwm:-0.666005021303;TAL1_TCF{3,4,12}:-0.674828366539;ESR1:-0.678247167338;ATF6:-0.687921936205;HSF1,2:-0.690450849554;FOXD3:-0.692501104397;ETS1,2:-0.712728639786;TP53:-0.715068260801;PPARG:-0.722432124451;DMAP1_NCOR{1,2}_SMARC:-0.732230518292;FOSL2:-0.741448675224;HNF1A:-0.748865398806;SPIB:-0.789600737377;PAX8:-0.813047645567;BACH2:-0.913147583467;FOS_FOS{B,L1}_JUN{B,D}:-0.91599827972;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.948880769797;TEAD1:-0.953658420518;ELK1,4_GABP{A,B1}:-1.03496873854;HNF4A_NR2F1,2:-1.05494734332;GLI1..3:-1.07527631952;SRF:-1.09089196977;TBP:-1.13004160987;RUNX1..3:-1.14030167268;HLF:-1.18543266082;NFKB1_REL_RELA:-1.20781189886;E2F1..5:-1.26572799762;HIF1A:-1.28256387409;RXR{A,B,G}:-1.33211870098;EN1,2:-1.39841043707;MYB:-1.46461272143;RXRA_VDR{dimer}:-1.50092786604;ELF1,2,4:-1.53620438266;ALX4:-1.60056637416;NKX3-1:-1.63560008908;POU2F1..3:-1.64028456539;EVI1:-1.69406080368;NKX2-1,4:-1.70701628905;HES1:-1.72112957772;NKX2-2,8:-1.73477630304;PITX1..3:-1.74280029209;STAT5{A,B}:-1.75256546657;ZBTB16:-1.93293269078;HOX{A5,B5}:-2.30810248722;CDX1,2,4:-2.38339000659;AIRE:-2.52666216475;NR6A1:-3.24300685861
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10034-101E7;search_select_hide=table117:FF:10034-101E7
}}
}}

Latest revision as of 12:16, 3 June 2020

Name:parietal lobe, adult, pool1
Species:Human (Homo sapiens)
Library ID:CNhs10641
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueparietal lobe
dev stage35-89 years old adult
sexmixed
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyClontech
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number636571
catalog numberCat:636571
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005014
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10641 CAGE DRX008702 DRR009574
Accession ID Hg19

Library idBAMCTSS
CNhs10641 DRZ000999 DRZ002384
Accession ID Hg38

Library idBAMCTSS
CNhs10641 DRZ012349 DRZ013734
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.331
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.136
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.368
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0.0519
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.12
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.529
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0267
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.14
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0.11
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0.14
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0.14
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.0267
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.029
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.122
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.243
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.0267
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.137
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0.0756
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.179
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.965
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.0267
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.0741
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0.586
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0267
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0.0267
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.64
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.0148
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.331
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0267
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.125
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.368
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0267
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0.311
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.238
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.559
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.453
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.682
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.0267
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0.129
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.12
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.0267
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.725
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0.0982
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0.14
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0.433
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.0267
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.16
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.0267
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10641

Jaspar motifP-value
MA0002.20.00839
MA0003.10.383
MA0004.10.481
MA0006.10.393
MA0007.10.218
MA0009.10.247
MA0014.10.694
MA0017.10.00361
MA0018.20.0422
MA0019.10.705
MA0024.10.968
MA0025.10.171
MA0027.10.519
MA0028.10.108
MA0029.10.167
MA0030.10.0993
MA0031.10.812
MA0035.20.141
MA0038.10.0379
MA0039.20.277
MA0040.10.361
MA0041.10.161
MA0042.10.597
MA0043.10.314
MA0046.10.0925
MA0047.20.146
MA0048.10.105
MA0050.10.00307
MA0051.10.0724
MA0052.10.0587
MA0055.10.00375
MA0057.10.948
MA0058.10.449
MA0059.10.0794
MA0060.10.179
MA0061.10.00904
MA0062.20.0277
MA0065.25.6965e-4
MA0066.10.0291
MA0067.10.687
MA0068.10.37
MA0069.10.517
MA0070.10.0492
MA0071.10.0399
MA0072.10.52
MA0073.10.368
MA0074.10.18
MA0076.10.27
MA0077.10.177
MA0078.10.874
MA0079.20.375
MA0080.26.0115e-8
MA0081.10.0613
MA0083.10.163
MA0084.10.606
MA0087.10.327
MA0088.10.144
MA0090.10.264
MA0091.10.415
MA0092.10.386
MA0093.10.521
MA0099.22.45716e-10
MA0100.10.69
MA0101.10.00595
MA0102.20.172
MA0103.10.22
MA0104.20.428
MA0105.13.64246e-4
MA0106.10.0305
MA0107.10.00959
MA0108.20.318
MA0111.10.432
MA0112.20.00104
MA0113.10.297
MA0114.10.00409
MA0115.10.342
MA0116.10.00304
MA0117.10.946
MA0119.10.0489
MA0122.10.869
MA0124.10.704
MA0125.10.253
MA0131.10.927
MA0135.10.0158
MA0136.17.19597e-10
MA0137.20.504
MA0138.20.171
MA0139.10.394
MA0140.10.016
MA0141.10.0159
MA0142.10.82
MA0143.10.795
MA0144.10.278
MA0145.10.251
MA0146.10.0132
MA0147.10.295
MA0148.10.127
MA0149.10.0157
MA0150.10.00381
MA0152.10.981
MA0153.10.389
MA0154.10.0392
MA0155.10.696
MA0156.12.19848e-5
MA0157.10.724
MA0159.10.00566
MA0160.10.0509
MA0162.10.119
MA0163.11.42459e-6
MA0164.10.754
MA0258.10.0115
MA0259.10.724



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10641

Novel motifP-value
10.0314
100.0228
1000.256
1010.914
1020.784
1030.182
1040.183
1050.348
1060.0595
1070.126
1080.829
1090.00959
110.0143
1100.0385
1110.063
1120.289
1130.666
1140.0835
1150.918
1160.18
1170.00892
1180.0963
1190.104
120.799
1200.13
1210.682
1220.549
1230.619
1240.0302
1250.153
1260.0324
1270.484
1280.154
1290.544
130.00135
1300.551
1310.0619
1320.716
1330.00304
1340.259
1350.15
1360.0103
1370.794
1380.822
1390.0699
140.898
1400.141
1410.221
1420.896
1430.0151
1440.805
1450.0786
1460.664
1470.976
1480.142
1490.293
150.0757
1500.184
1510.663
1520.155
1530.741
1540.602
1550.366
1560.484
1570.431
1580.788
1590.0722
160.067
1600.194
1610.189
1620.965
1630.929
1640.0161
1650.0265
1660.773
1670.304
1680.694
1690.00772
170.161
180.186
190.208
20.989
200.097
210.0816
220.271
230.463
240.109
250.482
267.12615e-5
270.969
280.7
290.00977
30.0247
300.592
310.907
320.0266
330.0718
340.836
350.473
360.0901
370.0396
380.324
390.264
40.977
400.0589
410.457
420.168
430.106
440.0782
450.828
460.0455
470.0608
480.0534
490.137
50.465
500.371
510.514
520.627
530.916
540.506
550.351
560.477
570.23
580.297
590.134
60.562
600.0792
610.0648
620.163
630.17
640.21
650.29
660.311
670.33
680.377
690.381
70.0611
700.0211
710.00733
720.468
730.0508
740.655
750.0293
760.363
770.231
780.00291
790.172
80.0463
800.989
810.532
820.446
830.163
840.63
850.232
860.211
870.00851
880.867
890.531
90.544
900.0326
910.435
920.464
930.701
940.0573
950.0291
960.965
970.774
980.196
990.784



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10641


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001872 (parietal lobe)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010034 (human parietal lobe - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

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