FF:10044-101F8: Difference between revisions

Latest revision as of 12:17, 3 June 2020

Name:	spleen, fetal, pool1
Species:	Human (Homo sapiens)
Library ID:	CNhs10651
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	spleen
dev stage	12-31 weeks fetus
sex	mixed
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Clontech
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	3040796
catalog number	Cat:636585
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004976

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10651		CAGE		DRX008731		DRR009603

Accession ID Hg19

Library id		BAM		CTSS
CNhs10651		DRZ001028		DRZ002413

Accession ID Hg38

Library id		BAM		CTSS
CNhs10651		DRZ012378		DRZ013763

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.141
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	2.052811e-5
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.006
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0271
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0.0271
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.0227
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0.121
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.634
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.0527
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.0527
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0271
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.142
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.182
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.231
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0.443
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0.0768
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.162
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.284
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.233
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.0271
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0271
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.0768
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0.0271
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.00546
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0.0768
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0.492
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0533
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.0271
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.233
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.0768
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.251
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.0271
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.578
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.123
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.0271
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0.761
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.197
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0271
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0828
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.308
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0197
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0.0271
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0.0271
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.0271
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.0414
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0.0271
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0527
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.347
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0411
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0996
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.504
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.0271
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.0271
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.36
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.0271
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.0233
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0.121
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0.0271
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0.233
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.53
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.0768
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0.0271
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.181
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.00181
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0.0768
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.0996
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10651

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0596
MA0003.1	MA0003.1	0.064
MA0004.1	MA0004.1	0.786
MA0006.1	MA0006.1	0.372
MA0007.1	MA0007.1	0.747
MA0009.1	MA0009.1	0.695
MA0014.1	MA0014.1	0.48
MA0017.1	MA0017.1	0.612
MA0018.2	MA0018.2	0.321
MA0019.1	MA0019.1	0.0288
MA0024.1	MA0024.1	0.86
MA0025.1	MA0025.1	0.151
MA0027.1	MA0027.1	0.615
MA0028.1	MA0028.1	0.0727
MA0029.1	MA0029.1	0.432
MA0030.1	MA0030.1	3.38285e-4
MA0031.1	MA0031.1	0.0256
MA0035.2	MA0035.2	8.99135e-5
MA0038.1	MA0038.1	0.0611
MA0039.2	MA0039.2	0.0788
MA0040.1	MA0040.1	0.131
MA0041.1	MA0041.1	0.15
MA0042.1	MA0042.1	0.154
MA0043.1	MA0043.1	0.673
MA0046.1	MA0046.1	7.0815e-5
MA0047.2	MA0047.2	0.0318
MA0048.1	MA0048.1	0.0304
MA0050.1	MA0050.1	1.09671e-8
MA0051.1	MA0051.1	2.29752e-4
MA0052.1	MA0052.1	2.7598e-5
MA0055.1	MA0055.1	0.00456
MA0057.1	MA0057.1	0.84
MA0058.1	MA0058.1	0.988
MA0059.1	MA0059.1	0.0154
MA0060.1	MA0060.1	0.0564
MA0061.1	MA0061.1	0.694
MA0062.2	MA0062.2	0.534
MA0065.2	MA0065.2	0.0814
MA0066.1	MA0066.1	0.0785
MA0067.1	MA0067.1	0.578
MA0068.1	MA0068.1	3.00183e-4
MA0069.1	MA0069.1	0.349
MA0070.1	MA0070.1	0.252
MA0071.1	MA0071.1	0.246
MA0072.1	MA0072.1	0.264
MA0073.1	MA0073.1	0.841
MA0074.1	MA0074.1	0.383
MA0076.1	MA0076.1	0.42
MA0077.1	MA0077.1	0.408
MA0078.1	MA0078.1	0.49
MA0079.2	MA0079.2	0.0127
MA0080.2	MA0080.2	5.30507e-15
MA0081.1	MA0081.1	6.02527e-4
MA0083.1	MA0083.1	0.13
MA0084.1	MA0084.1	0.855
MA0087.1	MA0087.1	0.182
MA0088.1	MA0088.1	0.17
MA0090.1	MA0090.1	0.702
MA0091.1	MA0091.1	0.671
MA0092.1	MA0092.1	0.939
MA0093.1	MA0093.1	0.853
MA0099.2	MA0099.2	1.32402e-7
MA0100.1	MA0100.1	0.663
MA0101.1	MA0101.1	0.202
MA0102.2	MA0102.2	0.372
MA0103.1	MA0103.1	0.108
MA0104.2	MA0104.2	0.0275
MA0105.1	MA0105.1	0.00428
MA0106.1	MA0106.1	0.00833
MA0107.1	MA0107.1	0.115
MA0108.2	MA0108.2	2.22834e-14
MA0111.1	MA0111.1	0.62
MA0112.2	MA0112.2	0.0941
MA0113.1	MA0113.1	0.907
MA0114.1	MA0114.1	0.166
MA0115.1	MA0115.1	0.233
MA0116.1	MA0116.1	0.0567
MA0117.1	MA0117.1	0.58
MA0119.1	MA0119.1	0.0623
MA0122.1	MA0122.1	0.069
MA0124.1	MA0124.1	0.988
MA0125.1	MA0125.1	0.4
MA0131.1	MA0131.1	0.663
MA0135.1	MA0135.1	0.0587
MA0136.1	MA0136.1	4.00606e-14
MA0137.2	MA0137.2	1.13006e-6
MA0138.2	MA0138.2	0.377
MA0139.1	MA0139.1	0.0996
MA0140.1	MA0140.1	2.29674e-6
MA0141.1	MA0141.1	0.269
MA0142.1	MA0142.1	0.947
MA0143.1	MA0143.1	0.507
MA0144.1	MA0144.1	0.00312
MA0145.1	MA0145.1	0.399
MA0146.1	MA0146.1	0.796
MA0147.1	MA0147.1	0.0206
MA0148.1	MA0148.1	0.602
MA0149.1	MA0149.1	0.179
MA0150.1	MA0150.1	0.016
MA0152.1	MA0152.1	0.982
MA0153.1	MA0153.1	0.228
MA0154.1	MA0154.1	0.694
MA0155.1	MA0155.1	0.133
MA0156.1	MA0156.1	7.46699e-13
MA0157.1	MA0157.1	0.261
MA0159.1	MA0159.1	0.223
MA0160.1	MA0160.1	0.425
MA0162.1	MA0162.1	0.34
MA0163.1	MA0163.1	1.55949e-4
MA0164.1	MA0164.1	0.505
MA0258.1	MA0258.1	0.129
MA0259.1	MA0259.1	0.0892

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10651

Novel motif	Logo	P-value
1	1	0.0127
10	10	0.0166
100	100	0.0303
101	101	0.718
102	102	0.768
103	103	0.336
104	104	0.518
105	105	0.1
106	106	0.854
107	107	0.648
108	108	0.442
109	109	0.12
11	11	0.25
110	110	0.286
111	111	0.0481
112	112	0.846
113	113	0.15
114	114	0.031
115	115	0.789
116	116	0.104
117	117	0.032
118	118	0.0578
119	119	0.169
12	12	0.549
120	120	0.219
121	121	0.103
122	122	0.167
123	123	0.0372
124	124	0.565
125	125	0.256
126	126	0.953
127	127	0.974
128	128	0.95
129	129	0.183
13	13	0.0709
130	130	0.274
131	131	0.264
132	132	0.875
133	133	0.125
134	134	0.344
135	135	0.148
136	136	0.776
137	137	0.363
138	138	0.915
139	139	0.216
14	14	0.743
140	140	0.156
141	141	0.303
142	142	0.508
143	143	0.732
144	144	0.82
145	145	0.726
146	146	0.352
147	147	0.234
148	148	0.0916
149	149	0.654
15	15	0.0987
150	150	0.714
151	151	0.848
152	152	0.234
153	153	0.57
154	154	0.225
155	155	0.732
156	156	0.476
157	157	0.9
158	158	0.634
159	159	0.632
16	16	0.151
160	160	0.95
161	161	0.948
162	162	0.945
163	163	0.792
164	164	0.0104
165	165	0.604
166	166	0.629
167	167	0.00183
168	168	0.0659
169	169	0.617
17	17	0.637
18	18	0.2
19	19	0.719
2	2	0.177
20	20	0.141
21	21	0.463
22	22	0.603
23	23	0.708
24	24	0.702
25	25	0.655
26	26	0.0533
27	27	0.476
28	28	0.804
29	29	0.0307
3	3	0.274
30	30	0.0809
31	31	0.934
32	32	0.566
33	33	0.385
34	34	0.0501
35	35	0.243
36	36	0.199
37	37	0.165
38	38	0.929
39	39	0.94
4	4	0.617
40	40	0.319
41	41	0.905
42	42	0.451
43	43	0.41
44	44	0.364
45	45	0.192
46	46	0.177
47	47	0.121
48	48	0.317
49	49	0.254
5	5	0.317
50	50	0.427
51	51	0.879
52	52	0.435
53	53	0.64
54	54	0.788
55	55	0.347
56	56	0.872
57	57	0.0369
58	58	0.951
59	59	0.369
6	6	0.51
60	60	0.82
61	61	0.573
62	62	0.635
63	63	0.547
64	64	0.27
65	65	0.931
66	66	0.71
67	67	0.59
68	68	0.869
69	69	0.487
7	7	0.784
70	70	0.00305
71	71	0.0289
72	72	0.496
73	73	0.26
74	74	0.169
75	75	0.0429
76	76	0.0326
77	77	0.785
78	78	0.377
79	79	0.238
8	8	0.14
80	80	2.05596e-4
81	81	0.419
82	82	0.419
83	83	0.84
84	84	0.621
85	85	0.738
86	86	0.724
87	87	0.735
88	88	0.617
89	89	0.327
9	9	0.211
90	90	0.0594
91	91	0.876
92	92	0.561
93	93	0.903
94	94	0.251
95	95	0.175
96	96	0.621
97	97	0.896
98	98	0.124
99	99	0.944

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10651

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010044 human spleen - fetal sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002106 (spleen)
0002100 (trunk)
0000479 (tissue)
0001007 (digestive system)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0002075 (viscus)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0002553 (anatomical cavity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009569 (subdivision of trunk)
0002323 (body cavity)
0005177 (trunk region element)
0004177 (hemopoietic organ)
0005057 (immune organ)
0005172 (abdomen element)
0000464 (anatomical space)
0004458 (body cavity or lining)
0010317 (germ layer / neural crest derived structure)
0005173 (abdominal segment element)
0002390 (hematopoietic system)
0002417 (abdominal segment of trunk)
0002193 (hemolymphoid system)
0000916 (abdomen)
0002405 (immune system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010044 (human spleen - fetal sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0006603 (presumptive mesoderm)
UBERON:0004872 (splanchnic layer of lateral plate mesoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|id=FF:10044-101F8
+|DRA_sample_Accession=CAGE@SAMD00004976
-|name=spleen, fetal, pool1
+|accession_numbers=CAGE;DRX008731;DRR009603;DRZ001028;DRZ002413;DRZ012378;DRZ013763
-|sample_id=10044
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002106,UBERON:0002100,UBERON:0000479,UBERON:0001007,UBERON:0004119,UBERON:0000466,UBERON:0002075,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0002553,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009569,UBERON:0002323,UBERON:0005177,UBERON:0004177,UBERON:0005057,UBERON:0005172,UBERON:0000464,UBERON:0004458,UBERON:0010317,UBERON:0005173,UBERON:0002390,UBERON:0002417,UBERON:0002193,UBERON:0000916,UBERON:0002405
-|rna_tube_id=101F8
-|rna_box=101
-|rna_position=F8
-|sample_cell_lot=NA
-|sample_cell_catalog=NA
-|sample_company=Clontech
-|rna_lot_number=3040796
-|rna_catalog_number=Cat:636585
-|sample_species=Human (Homo sapiens)
-|sample_strain=
-|sample_dev_stage=12-31 weeks fetus
-|sample_tissue=spleen
-|sample_donor(cell lot)=34 pool
-|sample_sex=mixed
-|sample_age=
-|sample_ethnicity=C
-|rna_rin=
-|rna_od260/230=
-|rna_od260/280=
-|sample_cell_type=CELL MIXTURE - tissue sample
-|sample_cell_line=
-|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
-|sample_experimental_condition=
-|sample_disease=normal
-|rna_sample_type=total RNA
-|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
-|rna_weight_ug=50
-|rna_concentration=1
-|sample_note=
-|profile_hcage=CNhs10651,LSID658,release008,COMPLETED
-|profile_cagescan=,,,
-|profile_srnaseq=,,,
-|profile_rnaseq=,,,
 |ancestors_in_cell_lineage_facet=
-|ancestors_in_anatomy_facet=UBERON:0000042,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000077,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000916,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0000945,UBERON:0001007,UBERON:0001041,UBERON:0001048,UBERON:0001062,UBERON:0001555,UBERON:0002050,UBERON:0002075,UBERON:0002095,UBERON:0002100,UBERON:0002106,UBERON:0002193,UBERON:0002323,UBERON:0002390,UBERON:0002405,UBERON:0002417,UBERON:0002532,UBERON:0002553,UBERON:0003081,UBERON:0003104,UBERON:0003281,UBERON:0004119,UBERON:0004120,UBERON:0004177,UBERON:0004185,UBERON:0004457,UBERON:0004458,UBERON:0004782,UBERON:0004854,UBERON:0004872,UBERON:0004921,UBERON:0004923,UBERON:0005057,UBERON:0005172,UBERON:0005173,UBERON:0005177,UBERON:0005409,UBERON:0005423,UBERON:0005602,UBERON:0006293,UBERON:0007026,UBERON:0009034,UBERON:0009142
 |ancestors_in_disease_facet=
-|sample_description=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010044
+|comment=
+|created_by=
+|creation_date=
+|data_phase=2
+|datafreeze_phase=2
+|def=
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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002075;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002106;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002323;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002465;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004177
+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0006603,UBERON:0004872,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 66: / Line 41: @@
 |fonse_treatment=
 |fonse_treatment_closure=
-|top_motifs=
+|has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/spleen%252c%2520fetal%252c%2520pool1.CNhs10651.10044-101F8.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/spleen%252c%2520fetal%252c%2520pool1.CNhs10651.10044-101F8.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/spleen%252c%2520fetal%252c%2520pool1.CNhs10651.10044-101F8.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/spleen%252c%2520fetal%252c%2520pool1.CNhs10651.10044-101F8.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/spleen%252c%2520fetal%252c%2520pool1.CNhs10651.10044-101F8.hg38.nobarcode.ctss.bed.gz
+|id=FF:10044-101F8
+|is_a=EFO:0002091;;FF:0010044
+|is_obsolete=
+|library_id=CNhs10651
+|library_id_phase_based=2:CNhs10651
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10044
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10044
+|name=spleen, fetal, pool1
+|namespace=FANTOM5
+|part_of=
+|profile_cagescan=,,,
+|profile_hcage=CNhs10651,LSID658,release008,COMPLETED
+|profile_rnaseq=
+|profile_srnaseq=,,,
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+|rna_box=101
+|rna_catalog_number=Cat:636585
+|rna_concentration=1
+|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
+|rna_lot_number=3040796
+|rna_od260/230=
+|rna_od260/280=
+|rna_position=F8
+|rna_rin=
+|rna_sample_type=total RNA
+|rna_tube_id=101F8
+|rna_weight_ug=50
+|sample_age=
+|sample_category=tissues
+|sample_cell_catalog=NA
+|sample_cell_line=
+|sample_cell_lot=NA
+|sample_cell_type=CELL MIXTURE - tissue sample
+|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
+|sample_company=Clontech
+|sample_description=
+|sample_dev_stage=12-31 weeks fetus
+|sample_disease=normal
+|sample_donor(cell lot)=34 pool
+|sample_ethnicity=C
+|sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.20590466302506e-253!GO:0005737;cytoplasm;3.30335095160323e-141!GO:0005515;protein binding;4.87404959991316e-119!GO:0043227;membrane-bound organelle;2.35114848750783e-117!GO:0043231;intracellular membrane-bound organelle;3.27890305298175e-117!GO:0043226;organelle;2.24535718419317e-116!GO:0043229;intracellular organelle;4.96060870733952e-116!GO:0044444;cytoplasmic part;1.1709625011671e-80!GO:0044422;organelle part;2.03403793586364e-66!GO:0044446;intracellular organelle part;5.01622684747861e-65!GO:0032991;macromolecular complex;3.29966227431873e-63!GO:0043170;macromolecule metabolic process;1.38361838755638e-59!GO:0044238;primary metabolic process;2.18389350373566e-58!GO:0044237;cellular metabolic process;4.17494272261253e-56!GO:0005634;nucleus;1.96037834263173e-54!GO:0016043;cellular component organization and biogenesis;4.57177451245243e-48!GO:0044428;nuclear part;5.4950455287649e-48!GO:0019538;protein metabolic process;1.95773825076245e-45!GO:0003723;RNA binding;3.48978444303309e-43!GO:0043233;organelle lumen;7.19055713407198e-42!GO:0031974;membrane-enclosed lumen;7.19055713407198e-42!GO:0030529;ribonucleoprotein complex;9.92178720729845e-40!GO:0044260;cellular macromolecule metabolic process;2.15414499627304e-39!GO:0044267;cellular protein metabolic process;8.30526013913729e-39!GO:0043234;protein complex;4.29330856625517e-37!GO:0033036;macromolecule localization;1.17445981189966e-36!GO:0015031;protein transport;2.56228581227933e-35!GO:0045184;establishment of protein localization;5.72447122977283e-34!GO:0008104;protein localization;6.56321553360053e-34!GO:0043283;biopolymer metabolic process;2.2809776599041e-33!GO:0005829;cytosol;6.79006649330237e-31!GO:0031981;nuclear lumen;1.05908710226669e-30!GO:0006412;translation;1.7377752429078e-28!GO:0065003;macromolecular complex assembly;5.0920472308675e-28!GO:0046907;intracellular transport;9.6785784258777e-28!GO:0016071;mRNA metabolic process;7.92250752987919e-26!GO:0031090;organelle membrane;1.03650569446129e-25!GO:0006396;RNA processing;1.69040150530606e-25!GO:0022607;cellular component assembly;5.83523503084332e-25!GO:0005739;mitochondrion;6.87339743039707e-25!GO:0006886;intracellular protein transport;1.03304614660012e-24!GO:0010467;gene expression;1.716541319465e-24!GO:0008134;transcription factor binding;4.11548283871025e-24!GO:0006996;organelle organization and biogenesis;8.42467099457432e-24!GO:0031967;organelle envelope;3.33539102037941e-23!GO:0031975;envelope;5.71371703180055e-23!GO:0008380;RNA splicing;6.8562587440029e-23!GO:0006915;apoptosis;1.5911320793231e-22!GO:0012501;programmed cell death;1.73651017841786e-22!GO:0005840;ribosome;1.32579195695482e-21!GO:0008219;cell death;1.95682776705738e-21!GO:0016265;death;1.95682776705738e-21!GO:0005654;nucleoplasm;3.16125221470111e-21!GO:0006397;mRNA processing;5.99427034858295e-21!GO:0009059;macromolecule biosynthetic process;7.31389601802e-21!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.55582036811067e-21!GO:0051649;establishment of cellular localization;1.06564231306625e-20!GO:0051641;cellular localization;1.08588175314013e-20!GO:0050794;regulation of cellular process;1.85855201452851e-20!GO:0048523;negative regulation of cellular process;5.75964852731208e-20!GO:0050789;regulation of biological process;1.47182792229288e-19!GO:0000166;nucleotide binding;2.4575178980486e-19!GO:0016192;vesicle-mediated transport;1.01201648039552e-18!GO:0003735;structural constituent of ribosome;1.22244381500295e-18!GO:0044445;cytosolic part;1.34878513659233e-18!GO:0044249;cellular biosynthetic process;3.37863615838205e-18!GO:0048519;negative regulation of biological process;3.39052381237545e-18!GO:0048770;pigment granule;1.15401967132826e-17!GO:0042470;melanosome;1.15401967132826e-17!GO:0044451;nucleoplasm part;1.57442903906711e-17!GO:0009058;biosynthetic process;1.78423298479123e-17!GO:0033279;ribosomal subunit;2.08878467984383e-17!GO:0006950;response to stress;2.10186053345261e-17!GO:0044429;mitochondrial part;2.58682452479553e-17!GO:0065007;biological regulation;3.16795234960304e-17!GO:0005681;spliceosome;7.09212892573461e-17!GO:0043412;biopolymer modification;1.36905439866509e-16!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.07443735913503e-16!GO:0043687;post-translational protein modification;7.56329700370571e-16!GO:0032553;ribonucleotide binding;1.1082362541249e-15!GO:0032555;purine ribonucleotide binding;1.1082362541249e-15!GO:0006464;protein modification process;1.19588177202634e-15!GO:0003712;transcription cofactor activity;2.91373318766981e-15!GO:0006259;DNA metabolic process;2.91930788236579e-15!GO:0043228;non-membrane-bound organelle;6.40049856593753e-15!GO:0043232;intracellular non-membrane-bound organelle;6.40049856593753e-15!GO:0044265;cellular macromolecule catabolic process;1.09732583356157e-14!GO:0042981;regulation of apoptosis;1.23845261703812e-14!GO:0017076;purine nucleotide binding;2.21158443812351e-14!GO:0043067;regulation of programmed cell death;2.88578446381118e-14!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.21375090253892e-14!GO:0006793;phosphorus metabolic process;9.75309621720185e-14!GO:0006796;phosphate metabolic process;9.75309621720185e-14!GO:0005794;Golgi apparatus;1.75796284734634e-13!GO:0043285;biopolymer catabolic process;2.37218450565473e-13!GO:0006366;transcription from RNA polymerase II promoter;2.44655985793236e-13!GO:0007242;intracellular signaling cascade;2.82729745040686e-13!GO:0007243;protein kinase cascade;2.82729745040686e-13!GO:0005740;mitochondrial envelope;5.57011532868447e-13!GO:0002376;immune system process;1.20702934947549e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;1.34466168451497e-12!GO:0048518;positive regulation of biological process;1.45099349045379e-12!GO:0019941;modification-dependent protein catabolic process;1.62691424630299e-12!GO:0043632;modification-dependent macromolecule catabolic process;1.62691424630299e-12!GO:0009057;macromolecule catabolic process;1.8144455122753e-12!GO:0006512;ubiquitin cycle;1.81710105612979e-12!GO:0006511;ubiquitin-dependent protein catabolic process;2.14533722936707e-12!GO:0031966;mitochondrial membrane;2.45671858210349e-12!GO:0044257;cellular protein catabolic process;2.45671858210349e-12!GO:0048522;positive regulation of cellular process;2.61845211557155e-12!GO:0019866;organelle inner membrane;2.88270426477032e-12!GO:0006913;nucleocytoplasmic transport;3.37965108767048e-12!GO:0006119;oxidative phosphorylation;3.64785611456436e-12!GO:0005524;ATP binding;3.81973689122249e-12!GO:0019899;enzyme binding;4.66041440991001e-12!GO:0016462;pyrophosphatase activity;4.89682787443648e-12!GO:0032559;adenyl ribonucleotide binding;5.14867092732843e-12!GO:0016874;ligase activity;5.17742164523285e-12!GO:0006461;protein complex assembly;5.47319357202976e-12!GO:0007264;small GTPase mediated signal transduction;5.55970239709015e-12!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.74503599681673e-12!GO:0016310;phosphorylation;6.73527621230539e-12!GO:0016817;hydrolase activity, acting on acid anhydrides;7.35104144739589e-12!GO:0051169;nuclear transport;8.78698213384275e-12!GO:0017111;nucleoside-triphosphatase activity;9.39947871226852e-12!GO:0051246;regulation of protein metabolic process;1.00145802756748e-11!GO:0005635;nuclear envelope;1.11458448160732e-11!GO:0006605;protein targeting;1.23008498385802e-11!GO:0016604;nuclear body;1.488226052186e-11!GO:0016070;RNA metabolic process;1.55264581938448e-11!GO:0030695;GTPase regulator activity;1.95555257227514e-11!GO:0030036;actin cytoskeleton organization and biogenesis;2.66633295749095e-11!GO:0003676;nucleic acid binding;2.99332850228152e-11!GO:0043069;negative regulation of programmed cell death;3.49665391515385e-11!GO:0030163;protein catabolic process;4.78075187806858e-11!GO:0043066;negative regulation of apoptosis;4.80969755850565e-11!GO:0007049;cell cycle;6.13030208786674e-11!GO:0012505;endomembrane system;6.33667354836806e-11!GO:0048193;Golgi vesicle transport;8.7161146248944e-11!GO:0030554;adenyl nucleotide binding;1.04202603841831e-10!GO:0044248;cellular catabolic process;1.17412583196579e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;1.2280461393455e-10!GO:0015935;small ribosomal subunit;1.43638845212598e-10!GO:0005743;mitochondrial inner membrane;1.46352485731819e-10!GO:0006457;protein folding;1.53827239479566e-10!GO:0022618;protein-RNA complex assembly;1.98754791620652e-10!GO:0000502;proteasome complex (sensu Eukaryota);2.10188700273921e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.13615126387194e-10!GO:0006916;anti-apoptosis;4.55415732077235e-10!GO:0009966;regulation of signal transduction;5.28007106841935e-10!GO:0005773;vacuole;6.36385073237432e-10!GO:0006323;DNA packaging;7.28666763081489e-10!GO:0031965;nuclear membrane;9.81957512595709e-10!GO:0016564;transcription repressor activity;9.97899672414565e-10!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.23016701313009e-09!GO:0016607;nuclear speck;1.27633503520724e-09!GO:0016044;membrane organization and biogenesis;1.4736941023905e-09!GO:0030029;actin filament-based process;1.52185888303719e-09!GO:0031324;negative regulation of cellular metabolic process;1.69421356557572e-09!GO:0000323;lytic vacuole;1.73044025790167e-09!GO:0005764;lysosome;1.73044025790167e-09!GO:0005783;endoplasmic reticulum;1.74664519556712e-09!GO:0051276;chromosome organization and biogenesis;3.139168002537e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;4.83582536776208e-09!GO:0008639;small protein conjugating enzyme activity;5.59289681682542e-09!GO:0005730;nucleolus;5.88635435061963e-09!GO:0005768;endosome;5.94257579232543e-09!GO:0008565;protein transporter activity;5.94257579232543e-09!GO:0031252;leading edge;7.09631559906988e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;7.12430769897411e-09!GO:0000375;RNA splicing, via transesterification reactions;7.12430769897411e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.12430769897411e-09!GO:0004842;ubiquitin-protein ligase activity;7.17151089051665e-09!GO:0005083;small GTPase regulator activity;8.04886229518106e-09!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;8.87513226644624e-09!GO:0003713;transcription coactivator activity;1.0792156875386e-08!GO:0009892;negative regulation of metabolic process;1.09950169190485e-08!GO:0031982;vesicle;1.31210436536947e-08!GO:0008135;translation factor activity, nucleic acid binding;1.53634515067082e-08!GO:0007265;Ras protein signal transduction;1.93910312863431e-08!GO:0016563;transcription activator activity;2.09206299583504e-08!GO:0051082;unfolded protein binding;2.38290650477029e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.49855195435344e-08!GO:0019787;small conjugating protein ligase activity;2.53608616714573e-08!GO:0044455;mitochondrial membrane part;2.86731687174581e-08!GO:0008047;enzyme activator activity;3.28753814850978e-08!GO:0005793;ER-Golgi intermediate compartment;3.861213331406e-08!GO:0017038;protein import;4.41482842354361e-08!GO:0031410;cytoplasmic vesicle;4.89626467950193e-08!GO:0044453;nuclear membrane part;5.21746252551628e-08!GO:0031988;membrane-bound vesicle;5.69298037788186e-08!GO:0005746;mitochondrial respiratory chain;7.96086442114622e-08!GO:0015934;large ribosomal subunit;7.98507445181585e-08!GO:0051726;regulation of cell cycle;7.9910105047127e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;7.9910105047127e-08!GO:0050136;NADH dehydrogenase (quinone) activity;9.20822645981981e-08!GO:0003954;NADH dehydrogenase activity;9.20822645981981e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.20822645981981e-08!GO:0016481;negative regulation of transcription;9.81449384371065e-08!GO:0000074;regulation of progression through cell cycle;1.04522773370983e-07!GO:0005096;GTPase activator activity;1.10082699584175e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.44311273093081e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.44573964183716e-07!GO:0016568;chromatin modification;1.4734174798761e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.61705219118169e-07!GO:0022402;cell cycle process;1.66667596504923e-07!GO:0065009;regulation of a molecular function;2.04706441509191e-07!GO:0006606;protein import into nucleus;2.13756045388911e-07!GO:0009056;catabolic process;2.14578669429052e-07!GO:0051170;nuclear import;2.29914716806716e-07!GO:0003714;transcription corepressor activity;2.42100843288273e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.49526499567773e-07!GO:0003743;translation initiation factor activity;2.79950294282297e-07!GO:0006446;regulation of translational initiation;3.48977770616191e-07!GO:0048468;cell development;3.65123811112591e-07!GO:0048475;coated membrane;3.77711415184819e-07!GO:0030117;membrane coat;3.77711415184819e-07!GO:0008092;cytoskeletal protein binding;4.74007671435627e-07!GO:0005770;late endosome;6.73663325887989e-07!GO:0006897;endocytosis;8.00299696629463e-07!GO:0010324;membrane invagination;8.00299696629463e-07!GO:0031980;mitochondrial lumen;8.06762313791511e-07!GO:0005759;mitochondrial matrix;8.06762313791511e-07!GO:0051186;cofactor metabolic process;9.25751437764116e-07!GO:0005643;nuclear pore;9.76417423807425e-07!GO:0016881;acid-amino acid ligase activity;1.15930941957634e-06!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.26913930947987e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.38393252345049e-06!GO:0006333;chromatin assembly or disassembly;1.38393252345049e-06!GO:0045786;negative regulation of progression through cell cycle;1.9894311465565e-06!GO:0030120;vesicle coat;2.31612957924434e-06!GO:0030662;coated vesicle membrane;2.31612957924434e-06!GO:0042775;organelle ATP synthesis coupled electron transport;2.48431909415094e-06!GO:0042773;ATP synthesis coupled electron transport;2.48431909415094e-06!GO:0003924;GTPase activity;2.51447322873973e-06!GO:0006403;RNA localization;2.92289473556094e-06!GO:0030964;NADH dehydrogenase complex (quinone);3.01734850237203e-06!GO:0045271;respiratory chain complex I;3.01734850237203e-06!GO:0005747;mitochondrial respiratory chain complex I;3.01734850237203e-06!GO:0065004;protein-DNA complex assembly;3.08157889009558e-06!GO:0006413;translational initiation;3.08157889009558e-06!GO:0050657;nucleic acid transport;3.14407747139694e-06!GO:0051236;establishment of RNA localization;3.14407747139694e-06!GO:0050658;RNA transport;3.14407747139694e-06!GO:0030097;hemopoiesis;3.18021417715955e-06!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.40419794976757e-06!GO:0019222;regulation of metabolic process;3.43676265025984e-06!GO:0000785;chromatin;3.71094430557639e-06!GO:0005525;GTP binding;3.94564512993888e-06!GO:0045892;negative regulation of transcription, DNA-dependent;4.75817225762129e-06!GO:0019829;cation-transporting ATPase activity;4.76279572712593e-06!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.96625192288742e-06!GO:0006955;immune response;6.40770985509055e-06!GO:0016887;ATPase activity;6.61128025336471e-06!GO:0008283;cell proliferation;6.65811310448043e-06!GO:0004386;helicase activity;6.65811310448043e-06!GO:0042623;ATPase activity, coupled;7.61490852932413e-06!GO:0006888;ER to Golgi vesicle-mediated transport;7.88712294679816e-06!GO:0046930;pore complex;8.02355146123411e-06!GO:0007010;cytoskeleton organization and biogenesis;8.63160163774107e-06!GO:0044432;endoplasmic reticulum part;8.63334231266735e-06!GO:0044440;endosomal part;8.76587899952223e-06!GO:0010008;endosome membrane;8.76587899952223e-06!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.84083316281647e-06!GO:0002520;immune system development;9.38237071649149e-06!GO:0048534;hemopoietic or lymphoid organ development;1.20558807987773e-05!GO:0005839;proteasome core complex (sensu Eukaryota);1.36115169214242e-05!GO:0009967;positive regulation of signal transduction;1.38673906595741e-05!GO:0016197;endosome transport;1.79387106484097e-05!GO:0015986;ATP synthesis coupled proton transport;2.20140458072028e-05!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.20140458072028e-05!GO:0009060;aerobic respiration;2.50673114554448e-05!GO:0008286;insulin receptor signaling pathway;2.57729024068135e-05!GO:0001775;cell activation;2.72602342708177e-05!GO:0048471;perinuclear region of cytoplasm;2.87109511678756e-05!GO:0032446;protein modification by small protein conjugation;2.94539300818633e-05!GO:0006974;response to DNA damage stimulus;3.12429829071737e-05!GO:0008026;ATP-dependent helicase activity;3.6287226406491e-05!GO:0060090;molecular adaptor activity;3.83922160612236e-05!GO:0009259;ribonucleotide metabolic process;3.86461407608562e-05!GO:0016567;protein ubiquitination;3.95376979588833e-05!GO:0032561;guanyl ribonucleotide binding;3.99061206171552e-05!GO:0019001;guanyl nucleotide binding;3.99061206171552e-05!GO:0003697;single-stranded DNA binding;4.07375226711359e-05!GO:0043566;structure-specific DNA binding;4.15790003874898e-05!GO:0006468;protein amino acid phosphorylation;4.18724075951642e-05!GO:0065002;intracellular protein transport across a membrane;4.20209590078304e-05!GO:0005667;transcription factor complex;4.33230885527469e-05!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;5.2096722117059e-05!GO:0016301;kinase activity;5.22069858112608e-05!GO:0050790;regulation of catalytic activity;5.25071918298922e-05!GO:0008361;regulation of cell size;5.32541696815506e-05!GO:0043065;positive regulation of apoptosis;5.32541696815506e-05!GO:0009150;purine ribonucleotide metabolic process;5.42381670783951e-05!GO:0006163;purine nucleotide metabolic process;5.5703230514088e-05!GO:0009611;response to wounding;5.5823746243286e-05!GO:0051028;mRNA transport;5.75644604984415e-05!GO:0001726;ruffle;6.0480259456459e-05!GO:0051789;response to protein stimulus;6.34174965653723e-05!GO:0006986;response to unfolded protein;6.34174965653723e-05!GO:0009893;positive regulation of metabolic process;6.5669897994123e-05!GO:0005694;chromosome;6.75740887931914e-05!GO:0004298;threonine endopeptidase activity;7.62878643175936e-05!GO:0045321;leukocyte activation;7.89061812817243e-05!GO:0043068;positive regulation of programmed cell death;7.98622061113025e-05!GO:0051056;regulation of small GTPase mediated signal transduction;8.02385935390074e-05!GO:0009615;response to virus;8.21434591925818e-05!GO:0044427;chromosomal part;8.38671722895465e-05!GO:0016049;cell growth;8.5459629453721e-05!GO:0006334;nucleosome assembly;8.74119990142414e-05!GO:0051427;hormone receptor binding;9.07334004208688e-05!GO:0008154;actin polymerization and/or depolymerization;9.69847600221045e-05!GO:0045333;cellular respiration;0.000100099308762123!GO:0030027;lamellipodium;0.000100222509726128!GO:0009152;purine ribonucleotide biosynthetic process;0.000105815895332335!GO:0006164;purine nucleotide biosynthetic process;0.000111809914759755!GO:0030532;small nuclear ribonucleoprotein complex;0.000116525237643407!GO:0030100;regulation of endocytosis;0.000119291242148848!GO:0007165;signal transduction;0.00012089650114648!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000125567750816376!GO:0009719;response to endogenous stimulus;0.000129239568363151!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.000130512606572656!GO:0006099;tricarboxylic acid cycle;0.000134358837058569!GO:0046356;acetyl-CoA catabolic process;0.000134358837058569!GO:0044431;Golgi apparatus part;0.000136670531176577!GO:0042802;identical protein binding;0.000139957876010068!GO:0003779;actin binding;0.000139957876010068!GO:0009260;ribonucleotide biosynthetic process;0.000142323816226956!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000147908458637804!GO:0031497;chromatin assembly;0.000150219014085489!GO:0030218;erythrocyte differentiation;0.00015042663720202!GO:0000278;mitotic cell cycle;0.000154076940768237!GO:0042254;ribosome biogenesis and assembly;0.000160554294833208!GO:0000151;ubiquitin ligase complex;0.000162323174208855!GO:0035257;nuclear hormone receptor binding;0.000163203428062894!GO:0016469;proton-transporting two-sector ATPase complex;0.000171326820152807!GO:0006417;regulation of translation;0.000186125989051106!GO:0006613;cotranslational protein targeting to membrane;0.000193484806178678!GO:0018193;peptidyl-amino acid modification;0.000195693551664937!GO:0005057;receptor signaling protein activity;0.000199958142206833!GO:0001558;regulation of cell growth;0.000200315235765266!GO:0051187;cofactor catabolic process;0.000204751065554762!GO:0019904;protein domain specific binding;0.00021273260020438!GO:0045893;positive regulation of transcription, DNA-dependent;0.000232577803289619!GO:0045941;positive regulation of transcription;0.00023673881146051!GO:0005798;Golgi-associated vesicle;0.000252752849774587!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000286572059611228!GO:0006732;coenzyme metabolic process;0.000298053481739727!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000301474309947031!GO:0030099;myeloid cell differentiation;0.00030294247230596!GO:0000245;spliceosome assembly;0.000304817928349162!GO:0045259;proton-transporting ATP synthase complex;0.000310003306122711!GO:0009607;response to biotic stimulus;0.000310003306122711!GO:0003724;RNA helicase activity;0.00031127635439985!GO:0005774;vacuolar membrane;0.000316893935689628!GO:0005761;mitochondrial ribosome;0.000321357033778713!GO:0000313;organellar ribosome;0.000321357033778713!GO:0051168;nuclear export;0.000322626357101765!GO:0007266;Rho protein signal transduction;0.000336761357197556!GO:0007229;integrin-mediated signaling pathway;0.000348253779114214!GO:0046649;lymphocyte activation;0.000349136521835307!GO:0009055;electron carrier activity;0.000357652762373844!GO:0030118;clathrin coat;0.000357652762373844!GO:0005099;Ras GTPase activator activity;0.000365723252468468!GO:0005070;SH3/SH2 adaptor activity;0.000382971700544329!GO:0043623;cellular protein complex assembly;0.000385687355104397!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.000392182315348329!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00040536919519788!GO:0030041;actin filament polymerization;0.000416295294990046!GO:0006754;ATP biosynthetic process;0.000416295294990046!GO:0006753;nucleoside phosphate metabolic process;0.000416295294990046!GO:0006979;response to oxidative stress;0.000418201987549605!GO:0009199;ribonucleoside triphosphate metabolic process;0.000418807417289068!GO:0002764;immune response-regulating signal transduction;0.000419054597969656!GO:0046034;ATP metabolic process;0.00042594049763433!GO:0005885;Arp2/3 protein complex;0.00043476073376065!GO:0001666;response to hypoxia;0.000450948432195619!GO:0005765;lysosomal membrane;0.000455689852888778!GO:0030133;transport vesicle;0.000477442366406765!GO:0030674;protein binding, bridging;0.000478424995577475!GO:0009141;nucleoside triphosphate metabolic process;0.000481180928580142!GO:0009205;purine ribonucleoside triphosphate metabolic process;0.000494738006324773!GO:0009144;purine nucleoside triphosphate metabolic process;0.000494738006324773!GO:0009142;nucleoside triphosphate biosynthetic process;0.000511320893950171!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000511320893950171!GO:0051336;regulation of hydrolase activity;0.000554406703177354!GO:0005905;coated pit;0.000558193628859686!GO:0005085;guanyl-nucleotide exchange factor activity;0.000591355215055706!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000604508517585169!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000604508517585169!GO:0006954;inflammatory response;0.000604508517585169!GO:0006401;RNA catabolic process;0.000609667845541326!GO:0006084;acetyl-CoA metabolic process;0.000609667845541326!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000655985817406396!GO:0004812;aminoacyl-tRNA ligase activity;0.000655985817406396!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000655985817406396!GO:0031902;late endosome membrane;0.000662598255733314!GO:0046983;protein dimerization activity;0.000662598255733314!GO:0031326;regulation of cellular biosynthetic process;0.000670293752657466!GO:0006260;DNA replication;0.000681019507674026!GO:0031323;regulation of cellular metabolic process;0.000695035131675754!GO:0035258;steroid hormone receptor binding;0.0007027719561375!GO:0031325;positive regulation of cellular metabolic process;0.000707397506069619!GO:0015078;hydrogen ion transmembrane transporter activity;0.000723007913892309!GO:0006917;induction of apoptosis;0.000743373929683671!GO:0051188;cofactor biosynthetic process;0.000752659087564037!GO:0006402;mRNA catabolic process;0.00083588885695054!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000843177834735167!GO:0005938;cell cortex;0.000886247202612515!GO:0016740;transferase activity;0.000897836978880638!GO:0005769;early endosome;0.000909249780046781!GO:0004674;protein serine/threonine kinase activity;0.000921844162100539!GO:0002253;activation of immune response;0.000925491079923669!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00092712801929892!GO:0005789;endoplasmic reticulum membrane;0.000972602881315725!GO:0002757;immune response-activating signal transduction;0.000976879440516393!GO:0051235;maintenance of localization;0.00102560124679158!GO:0012502;induction of programmed cell death;0.00102560124679158!GO:0030867;rough endoplasmic reticulum membrane;0.00106144878962035!GO:0043038;amino acid activation;0.00106144878962035!GO:0006418;tRNA aminoacylation for protein translation;0.00106144878962035!GO:0043039;tRNA aminoacylation;0.00106144878962035!GO:0006281;DNA repair;0.00107402044557009!GO:0005788;endoplasmic reticulum lumen;0.0011310391404126!GO:0009109;coenzyme catabolic process;0.00128089339338484!GO:0016787;hydrolase activity;0.00128702016365887!GO:0046578;regulation of Ras protein signal transduction;0.00130633095469474!GO:0043087;regulation of GTPase activity;0.00131580307977476!GO:0042168;heme metabolic process;0.00136171506097238!GO:0009889;regulation of biosynthetic process;0.00139881074096968!GO:0050900;leukocyte migration;0.00140891321451399!GO:0042110;T cell activation;0.00148478829803315!GO:0033116;ER-Golgi intermediate compartment membrane;0.00149816131569552!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00150158659700442!GO:0045792;negative regulation of cell size;0.00154048450963913!GO:0005813;centrosome;0.00157151182627779!GO:0004672;protein kinase activity;0.00158329526783946!GO:0044437;vacuolar part;0.00161450079298333!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00167797273157814!GO:0050851;antigen receptor-mediated signaling pathway;0.00187438905204319!GO:0005791;rough endoplasmic reticulum;0.00200060436016666!GO:0008186;RNA-dependent ATPase activity;0.00200837136455362!GO:0009897;external side of plasma membrane;0.0020685501601!GO:0051338;regulation of transferase activity;0.00219767564925827!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00224417679573097!GO:0019843;rRNA binding;0.00226165723169648!GO:0051049;regulation of transport;0.00226469792644797!GO:0045045;secretory pathway;0.00229992178221985!GO:0030308;negative regulation of cell growth;0.00234340649015944!GO:0008250;oligosaccharyl transferase complex;0.00246071725395789!GO:0030521;androgen receptor signaling pathway;0.00256192346007147!GO:0045121;lipid raft;0.00258334020079897!GO:0033673;negative regulation of kinase activity;0.00263842486548962!GO:0006469;negative regulation of protein kinase activity;0.00263842486548962!GO:0043549;regulation of kinase activity;0.00272903202576211!GO:0009117;nucleotide metabolic process;0.00282215723834107!GO:0000139;Golgi membrane;0.00289418783984723!GO:0008632;apoptotic program;0.00294324153484692!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00294324153484692!GO:0003702;RNA polymerase II transcription factor activity;0.00296334865855717!GO:0006612;protein targeting to membrane;0.00308838140439042!GO:0030658;transport vesicle membrane;0.00308938455937912!GO:0030518;steroid hormone receptor signaling pathway;0.00319758362399052!GO:0051251;positive regulation of lymphocyte activation;0.00323431506375176!GO:0030119;AP-type membrane coat adaptor complex;0.00327820680209406!GO:0005100;Rho GTPase activator activity;0.00330467257957071!GO:0006364;rRNA processing;0.00333071253339935!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00336943005596892!GO:0006611;protein export from nucleus;0.00337867910406065!GO:0019838;growth factor binding;0.00353459866639032!GO:0030131;clathrin adaptor complex;0.00357600354066686!GO:0006607;NLS-bearing substrate import into nucleus;0.00357600354066686!GO:0046822;regulation of nucleocytoplasmic transport;0.00390129534836956!GO:0002443;leukocyte mediated immunity;0.00391777422856316!GO:0051348;negative regulation of transferase activity;0.00399182660689047!GO:0016363;nuclear matrix;0.00402527978675328!GO:0003690;double-stranded DNA binding;0.00421614218297317!GO:0006778;porphyrin metabolic process;0.00427399568844194!GO:0033013;tetrapyrrole metabolic process;0.00427399568844194!GO:0032940;secretion by cell;0.00427544954574076!GO:0051920;peroxiredoxin activity;0.00447231306170289!GO:0030134;ER to Golgi transport vesicle;0.00447565285882321!GO:0007169;transmembrane receptor protein tyrosine kinase signaling pathway;0.00464647269326247!GO:0015036;disulfide oxidoreductase activity;0.00467055468488499!GO:0016791;phosphoric monoester hydrolase activity;0.00488569828696314!GO:0016072;rRNA metabolic process;0.00496031556738818!GO:0002250;adaptive immune response;0.0050444339683509!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0050444339683509!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00512704327097703!GO:0030132;clathrin coat of coated pit;0.00515472053694224!GO:0040008;regulation of growth;0.00515770796076154!GO:0030127;COPII vesicle coat;0.00516774760069251!GO:0012507;ER to Golgi transport vesicle membrane;0.00516774760069251!GO:0045859;regulation of protein kinase activity;0.00548755966595924!GO:0004004;ATP-dependent RNA helicase activity;0.00550444149255972!GO:0051128;regulation of cellular component organization and biogenesis;0.00554874255289034!GO:0045454;cell redox homeostasis;0.00559614970052517!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00569778115026476!GO:0006891;intra-Golgi vesicle-mediated transport;0.00570185340139664!GO:0015629;actin cytoskeleton;0.00578629372470605!GO:0008654;phospholipid biosynthetic process;0.00593290685110975!GO:0005637;nuclear inner membrane;0.00603907741668703!GO:0051301;cell division;0.00605136944737241!GO:0019724;B cell mediated immunity;0.00620733434537849!GO:0005815;microtubule organizing center;0.00621463214930474!GO:0017166;vinculin binding;0.00630423055471953!GO:0008139;nuclear localization sequence binding;0.00653541389976719!GO:0004576;oligosaccharyl transferase activity;0.00661143904483005!GO:0000786;nucleosome;0.00662966185084573!GO:0051252;regulation of RNA metabolic process;0.00675873298314702!GO:0043488;regulation of mRNA stability;0.00682014753526244!GO:0043487;regulation of RNA stability;0.00682014753526244!GO:0003729;mRNA binding;0.00695413252014354!GO:0016064;immunoglobulin mediated immune response;0.00704674923213023!GO:0005048;signal sequence binding;0.0079579002750077!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0079695462981166!GO:0016311;dephosphorylation;0.00820832071974088!GO:0022415;viral reproductive process;0.00832552752074371!GO:0007005;mitochondrion organization and biogenesis;0.00857751274062264!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0086623720363405!GO:0044448;cell cortex part;0.00887024921415165!GO:0006752;group transfer coenzyme metabolic process;0.00922545072822954!GO:0050853;B cell receptor signaling pathway;0.00922545072822954!GO:0030155;regulation of cell adhesion;0.00934779721662234!GO:0006783;heme biosynthetic process;0.00953684253325994!GO:0042127;regulation of cell proliferation;0.00991350109375203!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00993712963964084!GO:0051329;interphase of mitotic cell cycle;0.00999212884551668!GO:0030660;Golgi-associated vesicle membrane;0.0102819686022826!GO:0045926;negative regulation of growth;0.0104847308711713!GO:0030384;phosphoinositide metabolic process;0.010643481110529!GO:0000165;MAPKKK cascade;0.0106970951089225!GO:0001944;vasculature development;0.0107232805849878!GO:0051087;chaperone binding;0.0115579623342149!GO:0001568;blood vessel development;0.0115579623342149!GO:0010468;regulation of gene expression;0.0115694762230788!GO:0043021;ribonucleoprotein binding;0.0120488068833821!GO:0007167;enzyme linked receptor protein signaling pathway;0.0120488068833821!GO:0006650;glycerophospholipid metabolic process;0.0123290255127735!GO:0050811;GABA receptor binding;0.0126869344906149!GO:0007050;cell cycle arrest;0.0129390913962967!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0131059153914266!GO:0002449;lymphocyte mediated immunity;0.0131059153914266!GO:0031901;early endosome membrane;0.0131317903300237!GO:0016584;nucleosome positioning;0.013199800879389!GO:0005521;lamin binding;0.0132682282261352!GO:0018196;peptidyl-asparagine modification;0.0134407969726843!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0134407969726843!GO:0065008;regulation of biological quality;0.0135411927209097!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.0141302041612501!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0143171511589105!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0143171511589105!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0143171511589105!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.0144755641872833!GO:0035035;histone acetyltransferase binding;0.0144755641872833!GO:0047485;protein N-terminus binding;0.0145197554272943!GO:0002252;immune effector process;0.014584349808846!GO:0005741;mitochondrial outer membrane;0.0146779187860973!GO:0032318;regulation of Ras GTPase activity;0.0149933674858589!GO:0031072;heat shock protein binding;0.0154174089262397!GO:0031663;lipopolysaccharide-mediated signaling pathway;0.015484971071797!GO:0030522;intracellular receptor-mediated signaling pathway;0.0155178131953176!GO:0006399;tRNA metabolic process;0.0155483205621196!GO:0050870;positive regulation of T cell activation;0.0158464126007464!GO:0000059;protein import into nucleus, docking;0.0160945257288857!GO:0051325;interphase;0.0161675874447634!GO:0000118;histone deacetylase complex;0.0163633898381227!GO:0042613;MHC class II protein complex;0.0163906609838588!GO:0043086;negative regulation of catalytic activity;0.0163906609838588!GO:0043407;negative regulation of MAP kinase activity;0.0169949534548238!GO:0045637;regulation of myeloid cell differentiation;0.017118457790875!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.017118457790875!GO:0048487;beta-tubulin binding;0.0171775107803868!GO:0051674;localization of cell;0.0172770309613184!GO:0006928;cell motility;0.0172770309613184!GO:0007040;lysosome organization and biogenesis;0.0175321752530742!GO:0006643;membrane lipid metabolic process;0.0177373569227886!GO:0004721;phosphoprotein phosphatase activity;0.0179602473365682!GO:0001817;regulation of cytokine production;0.0180498346307481!GO:0022403;cell cycle phase;0.0182986709093916!GO:0003682;chromatin binding;0.0184640899203807!GO:0030833;regulation of actin filament polymerization;0.019042630775677!GO:0006338;chromatin remodeling;0.0191580804403641!GO:0051020;GTPase binding;0.0193562572346523!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0194090504516035!GO:0051223;regulation of protein transport;0.0194818535203844!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0197902083445657!GO:0009108;coenzyme biosynthetic process;0.0199796143090375!GO:0015980;energy derivation by oxidation of organic compounds;0.0210001047855053!GO:0042113;B cell activation;0.0215612829888871!GO:0035023;regulation of Rho protein signal transduction;0.0216516670787507!GO:0006984;ER-nuclear signaling pathway;0.0221368628839684!GO:0051258;protein polymerization;0.0221551502862851!GO:0019900;kinase binding;0.0223334093594318!GO:0016779;nucleotidyltransferase activity;0.0225270714077857!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0225270714077857!GO:0033043;regulation of organelle organization and biogenesis;0.0225270714077857!GO:0002682;regulation of immune system process;0.0225270714077857!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0226345097120292!GO:0015399;primary active transmembrane transporter activity;0.0226345097120292!GO:0006892;post-Golgi vesicle-mediated transport;0.0230100938986214!GO:0048500;signal recognition particle;0.0232672114045697!GO:0050681;androgen receptor binding;0.0236411643558153!GO:0006509;membrane protein ectodomain proteolysis;0.0236902363504016!GO:0033619;membrane protein proteolysis;0.0236902363504016!GO:0015630;microtubule cytoskeleton;0.0241579702796285!GO:0031968;organelle outer membrane;0.0244894060366991!GO:0006350;transcription;0.0248981889419905!GO:0008624;induction of apoptosis by extracellular signals;0.0250084483036706!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.025406276379351!GO:0006779;porphyrin biosynthetic process;0.0260428242606801!GO:0033014;tetrapyrrole biosynthetic process;0.0260428242606801!GO:0030663;COPI coated vesicle membrane;0.0260428242606801!GO:0030126;COPI vesicle coat;0.0260428242606801!GO:0051101;regulation of DNA binding;0.0262148142195733!GO:0051219;phosphoprotein binding;0.0262148142195733!GO:0051651;maintenance of cellular localization;0.0262167038016951!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.0264746533206705!GO:0030125;clathrin vesicle coat;0.0266243367882265!GO:0030665;clathrin coated vesicle membrane;0.0266243367882265!GO:0002521;leukocyte differentiation;0.0269277076185707!GO:0019902;phosphatase binding;0.0269520614591919!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0280195792722218!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0280195792722218!GO:0032763;regulation of mast cell cytokine production;0.0280827567657696!GO:0032762;mast cell cytokine production;0.0280827567657696!GO:0006487;protein amino acid N-linked glycosylation;0.0280910653851604!GO:0019867;outer membrane;0.0283149591003271!GO:0022890;inorganic cation transmembrane transporter activity;0.0291865124452745!GO:0006026;aminoglycan catabolic process;0.0297364292358794!GO:0006027;glycosaminoglycan catabolic process;0.0297364292358794!GO:0004177;aminopeptidase activity;0.0318214036163723!GO:0000087;M phase of mitotic cell cycle;0.0319744526384812!GO:0051098;regulation of binding;0.0320351732657517!GO:0007067;mitosis;0.0320370451070873!GO:0006644;phospholipid metabolic process;0.0322666113183145!GO:0019210;kinase inhibitor activity;0.0331187784618178!GO:0005684;U2-dependent spliceosome;0.0331319858173492!GO:0043405;regulation of MAP kinase activity;0.0331529363118096!GO:0051051;negative regulation of transport;0.0334751848706946!GO:0006470;protein amino acid dephosphorylation;0.0337496137954862!GO:0008305;integrin complex;0.0338652920262928!GO:0007034;vacuolar transport;0.0339355176069054!GO:0006516;glycoprotein catabolic process;0.0346832178633271!GO:0008234;cysteine-type peptidase activity;0.0346832178633271!GO:0046483;heterocycle metabolic process;0.0348209934245781!GO:0007162;negative regulation of cell adhesion;0.03567016194627!GO:0006959;humoral immune response;0.0358449593564653!GO:0019079;viral genome replication;0.0362115680093646!GO:0005862;muscle thin filament tropomyosin;0.0365016658222512!GO:0005832;chaperonin-containing T-complex;0.0366033915749691!GO:0015035;protein disulfide oxidoreductase activity;0.0366445207336739!GO:0006376;mRNA splice site selection;0.0366445207336739!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0366445207336739!GO:0017091;AU-rich element binding;0.0366445207336739!GO:0050779;RNA destabilization;0.0366445207336739!GO:0000289;poly(A) tail shortening;0.0366445207336739!GO:0030832;regulation of actin filament length;0.0366445207336739!GO:0045309;protein phosphorylated amino acid binding;0.0366445207336739!GO:0032535;regulation of cellular component size;0.0367446217803565!GO:0016859;cis-trans isomerase activity;0.0368276967015102!GO:0030595;leukocyte chemotaxis;0.0368439688209181!GO:0012506;vesicle membrane;0.0378818345161511!GO:0031267;small GTPase binding;0.0378922565325504!GO:0051090;regulation of transcription factor activity;0.0385164248031892!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0387806686032879!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0388775287340998!GO:0051249;regulation of lymphocyte activation;0.0388775908350852!GO:0043492;ATPase activity, coupled to movement of substances;0.0390048674264042!GO:0031625;ubiquitin protein ligase binding;0.0390906550267285!GO:0044262;cellular carbohydrate metabolic process;0.0394588137479117!GO:0008629;induction of apoptosis by intracellular signals;0.0397457725067376!GO:0033239;negative regulation of amine metabolic process;0.0400961601604667!GO:0045763;negative regulation of amino acid metabolic process;0.0400961601604667!GO:0001933;negative regulation of protein amino acid phosphorylation;0.0400961601604667!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0403029536457422!GO:0050865;regulation of cell activation;0.0403029536457422!GO:0005577;fibrinogen complex;0.0403081885684854!GO:0050852;T cell receptor signaling pathway;0.0403081885684854!GO:0030137;COPI-coated vesicle;0.0403771373189063!GO:0006595;polyamine metabolic process;0.0404740435380866!GO:0000303;response to superoxide;0.0404740435380866!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0404740435380866!GO:0033157;regulation of intracellular protein transport;0.0404740435380866!GO:0042306;regulation of protein import into nucleus;0.0404740435380866!GO:0006672;ceramide metabolic process;0.0404820427102873!GO:0016605;PML body;0.0410374668622404!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0411355994986006!GO:0007033;vacuole organization and biogenesis;0.0416695261537304!GO:0043433;negative regulation of transcription factor activity;0.0420153652793959!GO:0050776;regulation of immune response;0.0420207348307931!GO:0001816;cytokine production;0.0423861378410937!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0426681061006614!GO:0045730;respiratory burst;0.0430686973268794!GO:0030659;cytoplasmic vesicle membrane;0.0435853773609915!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0435853773609915!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0435853773609915!GO:0006414;translational elongation;0.0435853773609915!GO:0006352;transcription initiation;0.0439690721739343!GO:0051059;NF-kappaB binding;0.0439690721739343!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0447630628723875!GO:0045047;protein targeting to ER;0.0447630628723875!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.046735903488667!GO:0008147;structural constituent of bone;0.046735903488667!GO:0045920;negative regulation of exocytosis;0.0468421294321297!GO:0043301;negative regulation of leukocyte degranulation;0.0468421294321297!GO:0043305;negative regulation of mast cell degranulation;0.0468421294321297!GO:0022603;regulation of anatomical structure morphogenesis;0.0473744010209335!GO:0008360;regulation of cell shape;0.0473744010209335!GO:0022604;regulation of cell morphogenesis;0.0473744010209335!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0483349403491375!GO:0045646;regulation of erythrocyte differentiation;0.0483492959124501!GO:0048514;blood vessel morphogenesis;0.0483828843289498!GO:0005869;dynactin complex;0.0485245853475279!GO:0001516;prostaglandin biosynthetic process;0.0488162337975337!GO:0046457;prostanoid biosynthetic process;0.0488162337975337!GO:0006869;lipid transport;0.0488162337975337!GO:0030139;endocytic vesicle;0.0489067151871507!GO:0004185;serine carboxypeptidase activity;0.0490468811148234!GO:0015631;tubulin binding;0.0490662940699449!GO:0043621;protein self-association;0.049191415511953!GO:0007041;lysosomal transport;0.0493268065866679!GO:0045185;maintenance of protein localization;0.049502605089874!GO:0050863;regulation of T cell activation;0.0499543884805671!GO:0045334;clathrin-coated endocytic vesicle;0.0499826769886489
+|sample_id=10044
+|sample_note=
+|sample_sex=mixed
+|sample_species=Human (Homo sapiens)
+|sample_strain=
+|sample_tissue=spleen
+|top_motifs=GATA6:3.15709699536;RBPJ:2.5130499179;TLX2:1.99413437494;ETS1,2:1.98691558232;SP1:1.87257441649;TFAP4:1.86958798187;MAZ:1.79696130892;NFATC1..3:1.77290197033;XCPE1{core}:1.74125860121;SPIB:1.62453831741;STAT1,3:1.61779143823;PATZ1:1.58739850672;TFCP2:1.56753061454;ELF1,2,4:1.53422418251;SMAD1..7,9:1.48677958321;TBP:1.46874527828;T:1.44863723126;SPZ1:1.4156143703;FOX{D1,D2}:1.4141480731;ZNF148:1.38702650452;MZF1:1.36497764945;FOX{F1,F2,J1}:1.33761231929;SPI1:1.29550493771;RREB1:1.22114094344;PRDM1:1.13609428674;STAT2,4,6:1.13200893007;EGR1..3:1.12856549297;IRF7:1.10154563013;GTF2A1,2:1.09468862366;MTE{core}:1.07651226692;SOX{8,9,10}:1.03746869263;POU5F1:1.01370685048;NANOG{mouse}:1.00837969251;SOX5:1.00614945809;POU2F1..3:0.984375373238;RXRA_VDR{dimer}:0.976897579959;MYFfamily:0.966153008531;IRF1,2:0.965184527168;MED-1{core}:0.947967222972;PAX6:0.916224276226;HMX1:0.90907257011;EP300:0.874343405479;FOX{I1,J2}:0.850652282401;GTF2I:0.850188233196;SRF:0.820004149373;HIC1:0.814470084921;TFAP2{A,C}:0.80902867725;BREu{core}:0.80255557462;TGIF1:0.774802581704;SREBF1,2:0.753301362001;HSF1,2:0.739882229268;HIF1A:0.738400086619;PAX5:0.732293862873;TLX1..3_NFIC{dimer}:0.715993457918;HAND1,2:0.686750693808;IKZF1:0.68421763278;ZNF238:0.681327145403;MAFB:0.669585828606;ZFP161:0.655233597687;NR5A1,2:0.648344159676;TFAP2B:0.646630399843;ZNF423:0.645337955534;RUNX1..3:0.62653454701;FOXO1,3,4:0.604383936668;GCM1,2:0.599458393323;ATF2:0.556745919999;HNF4A_NR2F1,2:0.545288813212;RXR{A,B,G}:0.526376126927;HNF1A:0.52326549844;NKX2-1,4:0.498559360111;MTF1:0.473951211822;HES1:0.472757668152;ESR1:0.439565042438;GZF1:0.407926551586;NFY{A,B,C}:0.403129465092;PBX1:0.390296169057;SOX2:0.369297810769;NFKB1_REL_RELA:0.345638367611;EBF1:0.336509153522;MEF2{A,B,C,D}:0.331074424608;MYBL2:0.318222909099;CUX2:0.271803968382;CEBPA,B_DDIT3:0.269729322012;HBP1_HMGB_SSRP1_UBTF:0.265103371225;GFI1:0.221695277627;FOXA2:0.203959447668;NHLH1,2:0.187912644615;GATA4:0.162174047562;TOPORS:0.148763269579;AR:0.129269388398;GLI1..3:0.124715032076;FOXP3:0.112853836175;MYOD1:0.0930680001625;bHLH_family:0.0711855104963;JUN:0.0573008595514;GFI1B:0.0530089158194;EN1,2:0.0488642033411;LEF1_TCF7_TCF7L1,2:0.0392757906158;TBX4,5:0.0221187365668;RORA:0.00898011145339;IKZF2:0.00222045661355;LMO2:-0.00112705530957;REST:-0.00387786404238;NANOG:-0.00456937569874;ZNF143:-0.0139447715296;DMAP1_NCOR{1,2}_SMARC:-0.0290487668505;PAX2:-0.0378606477269;BPTF:-0.0478416829652;FOXN1:-0.0480232702204;PAX1,9:-0.0762036829032;PAX3,7:-0.0799916496728;E2F1..5:-0.0846821830264;TEAD1:-0.12328039942;CREB1:-0.12826429633;ATF4:-0.139977640938;NFIL3:-0.151475103639;TAL1_TCF{3,4,12}:-0.163775580657;NKX3-2:-0.182598876043;NR3C1:-0.255489210476;NR6A1:-0.257714343611;ZEB1:-0.263079240887;NR1H4:-0.297383670974;NFE2L2:-0.304768300787;MYB:-0.319661299008;SOX17:-0.319826418555;SNAI1..3:-0.321857238699;OCT4_SOX2{dimer}:-0.354356783851;ZIC1..3:-0.355116844279;ATF5_CREB3:-0.358006493515;VSX1,2:-0.372903284259;KLF4:-0.376040374455;PPARG:-0.413058009803;AHR_ARNT_ARNT2:-0.440254516345;NRF1:-0.442212836848;HLF:-0.459574747326;HOX{A6,A7,B6,B7}:-0.469487698887;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.476222860534;NFE2:-0.496941697615;ADNP_IRX_SIX_ZHX:-0.507761906387;PRRX1,2:-0.508887899807;XBP1:-0.50940339432;ZNF384:-0.515833649581;DBP:-0.51952018638;NKX3-1:-0.547163362464;FOXD3:-0.547810785051;ATF6:-0.553813596134;FOXP1:-0.564381693353;NKX2-3_NKX2-5:-0.596329163545;RFX2..5_RFXANK_RFXAP:-0.642462985378;STAT5{A,B}:-0.657769866501;TFDP1:-0.698467305417;HMGA1,2:-0.70204615577;FOSL2:-0.705234274174;POU1F1:-0.719327683336;FOS_FOS{B,L1}_JUN{B,D}:-0.722162261526;CRX:-0.774753615145;NFIX:-0.783708090326;POU6F1:-0.811975406538;FOXL1:-0.814556870953;BACH2:-0.822863114962;ZBTB6:-0.888138753887;FOXQ1:-0.893952661941;ELK1,4_GABP{A,B1}:-0.89412333105;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.944580335096;ALX4:-0.982465477337;PDX1:-0.992693269043;POU3F1..4:-1.01565582055;YY1:-1.02187057782;CDC5L:-1.04666998941;TP53:-1.05289370954;FOXM1:-1.07166870012;RFX1:-1.07183921643;ESRRA:-1.11699713124;HOXA9_MEIS1:-1.12147919211;NFE2L1:-1.14781906189;LHX3,4:-1.28046906439;PITX1..3:-1.2885529525;ALX1:-1.29095874784;ARID5B:-1.30200599075;CDX1,2,4:-1.33026352619;HOX{A5,B5}:-1.35212367657;NKX6-1,2:-1.36925494063;AIRE:-1.38523199193;UFEwm:-1.41322743266;HOX{A4,D4}:-1.50311702418;EVI1:-1.56376904173;PAX8:-1.72921814983;PAX4:-1.94116937682;TEF:-1.99287977518;NKX2-2,8:-2.1807833262;ONECUT1,2:-2.36414750686;ZBTB16:-2.74449639513
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10044-101F8;search_select_hide=table117:FF:10044-101F8
 }}

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FF:10044-101F8: Difference between revisions

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Latest revision as of 12:17, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0