FF:10509-107D5: Difference between revisions

Latest revision as of 14:27, 3 June 2020

Name:	large cell lung carcinoma cell line:IA-LM
Species:	Human (Homo sapiens)
Library ID:	CNhs11277
Sample type:	cell lines
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	lung
dev stage	NA
sex	male
age	68
cell type	unclassifiable
cell line	IA-LM
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005401

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11277		CAGE		DRX007911		DRR008783

Accession ID Hg19

Library id		BAM		CTSS
CNhs11277		DRZ000208		DRZ001593

Accession ID Hg38

Library id		BAM		CTSS
CNhs11277		DRZ011558		DRZ012943

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0693
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.185
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0436
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0941
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.126
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.0436
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.124
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.203
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.909
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0279
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0.0436
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.0436
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.042
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.354
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	2.075309e-4
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0436
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.0436
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11277

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.456
MA0003.1	MA0003.1	0.286
MA0004.1	MA0004.1	0.758
MA0006.1	MA0006.1	0.212
MA0007.1	MA0007.1	0.64
MA0009.1	MA0009.1	0.582
MA0014.1	MA0014.1	0.797
MA0017.1	MA0017.1	0.25
MA0018.2	MA0018.2	0.149
MA0019.1	MA0019.1	0.396
MA0024.1	MA0024.1	0.0417
MA0025.1	MA0025.1	0.134
MA0027.1	MA0027.1	0.404
MA0028.1	MA0028.1	1.07156e-4
MA0029.1	MA0029.1	0.177
MA0030.1	MA0030.1	0.118
MA0031.1	MA0031.1	9.42722e-4
MA0035.2	MA0035.2	0.296
MA0038.1	MA0038.1	0.415
MA0039.2	MA0039.2	0.693
MA0040.1	MA0040.1	0.678
MA0041.1	MA0041.1	0.76
MA0042.1	MA0042.1	0.587
MA0043.1	MA0043.1	0.853
MA0046.1	MA0046.1	0.46
MA0047.2	MA0047.2	0.046
MA0048.1	MA0048.1	0.0519
MA0050.1	MA0050.1	0.213
MA0051.1	MA0051.1	5.6859e-4
MA0052.1	MA0052.1	0.0663
MA0055.1	MA0055.1	0.00185
MA0057.1	MA0057.1	0.554
MA0058.1	MA0058.1	0.67
MA0059.1	MA0059.1	0.222
MA0060.1	MA0060.1	0.82
MA0061.1	MA0061.1	0.683
MA0062.2	MA0062.2	5.65764e-4
MA0065.2	MA0065.2	0.206
MA0066.1	MA0066.1	0.756
MA0067.1	MA0067.1	0.24
MA0068.1	MA0068.1	0.00197
MA0069.1	MA0069.1	0.631
MA0070.1	MA0070.1	0.704
MA0071.1	MA0071.1	0.609
MA0072.1	MA0072.1	0.249
MA0073.1	MA0073.1	0.498
MA0074.1	MA0074.1	0.158
MA0076.1	MA0076.1	3.84067e-4
MA0077.1	MA0077.1	0.488
MA0078.1	MA0078.1	0.706
MA0079.2	MA0079.2	0.49
MA0080.2	MA0080.2	7.56559e-6
MA0081.1	MA0081.1	0.694
MA0083.1	MA0083.1	0.918
MA0084.1	MA0084.1	0.427
MA0087.1	MA0087.1	0.747
MA0088.1	MA0088.1	0.00163
MA0090.1	MA0090.1	0.375
MA0091.1	MA0091.1	0.0207
MA0092.1	MA0092.1	0.332
MA0093.1	MA0093.1	0.917
MA0099.2	MA0099.2	1.61703e-16
MA0100.1	MA0100.1	0.68
MA0101.1	MA0101.1	0.222
MA0102.2	MA0102.2	0.223
MA0103.1	MA0103.1	0.0494
MA0104.2	MA0104.2	0.0352
MA0105.1	MA0105.1	0.143
MA0106.1	MA0106.1	0.552
MA0107.1	MA0107.1	0.603
MA0108.2	MA0108.2	5.23616e-4
MA0111.1	MA0111.1	0.555
MA0112.2	MA0112.2	0.079
MA0113.1	MA0113.1	0.241
MA0114.1	MA0114.1	0.551
MA0115.1	MA0115.1	0.961
MA0116.1	MA0116.1	0.794
MA0117.1	MA0117.1	0.893
MA0119.1	MA0119.1	0.779
MA0122.1	MA0122.1	0.877
MA0124.1	MA0124.1	0.466
MA0125.1	MA0125.1	0.34
MA0131.1	MA0131.1	0.584
MA0135.1	MA0135.1	0.0298
MA0136.1	MA0136.1	0.0627
MA0137.2	MA0137.2	0.0109
MA0138.2	MA0138.2	0.363
MA0139.1	MA0139.1	0.071
MA0140.1	MA0140.1	0.0355
MA0141.1	MA0141.1	0.0772
MA0142.1	MA0142.1	0.0638
MA0143.1	MA0143.1	0.813
MA0144.1	MA0144.1	0.398
MA0145.1	MA0145.1	0.1
MA0146.1	MA0146.1	0.621
MA0147.1	MA0147.1	0.0074
MA0148.1	MA0148.1	0.00769
MA0149.1	MA0149.1	0.404
MA0150.1	MA0150.1	0.00642
MA0152.1	MA0152.1	0.957
MA0153.1	MA0153.1	0.202
MA0154.1	MA0154.1	0.59
MA0155.1	MA0155.1	0.44
MA0156.1	MA0156.1	0.583
MA0157.1	MA0157.1	9.75701e-4
MA0159.1	MA0159.1	0.639
MA0160.1	MA0160.1	0.477
MA0162.1	MA0162.1	0.691
MA0163.1	MA0163.1	0.097
MA0164.1	MA0164.1	0.196
MA0258.1	MA0258.1	0.343
MA0259.1	MA0259.1	0.0479

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11277

Novel motif	Logo	P-value
1	1	0.784
10	10	0.385
100	100	0.789
101	101	0.372
102	102	0.657
103	103	0.305
104	104	0.685
105	105	0.709
106	106	0.388
107	107	0.795
108	108	0.394
109	109	0.894
11	11	0.504
110	110	0.578
111	111	0.0633
112	112	0.0793
113	113	0.704
114	114	0.862
115	115	0.0523
116	116	0.17
117	117	0.00673
118	118	0.767
119	119	0.533
12	12	0.474
120	120	0.0892
121	121	0.927
122	122	0.656
123	123	0.373
124	124	0.854
125	125	0.582
126	126	0.925
127	127	0.976
128	128	0.143
129	129	0.972
13	13	0.267
130	130	0.371
131	131	0.842
132	132	0.879
133	133	0.1
134	134	0.586
135	135	0.0331
136	136	0.211
137	137	0.931
138	138	0.486
139	139	0.949
14	14	0.379
140	140	0.264
141	141	0.66
142	142	0.18
143	143	0.764
144	144	0.696
145	145	0.15
146	146	0.159
147	147	0.932
148	148	0.0469
149	149	0.126
15	15	0.851
150	150	0.825
151	151	0.352
152	152	0.971
153	153	0.28
154	154	0.857
155	155	0.531
156	156	0.727
157	157	0.676
158	158	0.335
159	159	0.0564
16	16	0.258
160	160	0.481
161	161	0.925
162	162	0.988
163	163	0.0339
164	164	0.933
165	165	0.728
166	166	0.306
167	167	0.641
168	168	0.625
169	169	0.41
17	17	0.625
18	18	0.908
19	19	0.022
2	2	0.0148
20	20	1.79696e-4
21	21	0.688
22	22	0.298
23	23	0.00545
24	24	0.358
25	25	0.229
26	26	0.795
27	27	0.0507
28	28	0.128
29	29	0.117
3	3	0.563
30	30	0.407
31	31	0.474
32	32	8.76076e-4
33	33	0.744
34	34	0.196
35	35	0.167
36	36	0.15
37	37	0.643
38	38	0.568
39	39	0.343
4	4	0.0536
40	40	0.675
41	41	0.202
42	42	0.111
43	43	0.827
44	44	0.0852
45	45	0.254
46	46	0.915
47	47	0.726
48	48	0.938
49	49	0.438
5	5	0.737
50	50	0.481
51	51	0.104
52	52	0.183
53	53	0.867
54	54	0.295
55	55	0.58
56	56	0.914
57	57	0.381
58	58	0.913
59	59	0.477
6	6	0.931
60	60	0.159
61	61	0.0528
62	62	0.489
63	63	0.817
64	64	0.306
65	65	0.00621
66	66	2.77038e-6
67	67	0.263
68	68	0.996
69	69	0.862
7	7	0.913
70	70	0.337
71	71	0.785
72	72	0.526
73	73	0.748
74	74	0.644
75	75	0.0161
76	76	0.00274
77	77	0.161
78	78	0.609
79	79	0.249
8	8	0.194
80	80	0.408
81	81	0.619
82	82	0.202
83	83	0.115
84	84	0.386
85	85	0.361
86	86	0.44
87	87	0.241
88	88	0.822
89	89	0.0339
9	9	0.275
90	90	0.799
91	91	0.0588
92	92	0.777
93	93	0.793
94	94	0.628
95	95	0.441
96	96	0.38
97	97	0.546
98	98	0.708
99	99	0.859

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11277

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102205 large cell lung cancer cell line sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0000082 (epithelial cell of lung)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
0050615 (respiratory system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
1324 (lung cancer)
305 (carcinoma)
3905 (lung carcinoma)
3908 (non-small cell lung carcinoma)
4556 (lung large cell carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002048 (lung)
0002100 (trunk)
0000483 (epithelium)
0000479 (tissue)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0004802 (respiratory tract epithelium)
0000025 (tube)
0005911 (endo-epithelium)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0009569 (subdivision of trunk)
0005178 (thoracic cavity element)
0000072 (segment of respiratory tract)
0005177 (trunk region element)
0004807 (respiratory system epithelium)
0000117 (respiratory tube)
0000171 (respiration organ)
0000115 (lung epithelium)
0000464 (anatomical space)
0005181 (thoracic segment organ)
0010317 (germ layer / neural crest derived structure)
0000065 (respiratory tract)
0000170 (pair of lungs)
0001004 (respiratory system)
0002224 (thoracic cavity)
0000915 (thoracic segment of trunk)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0100353 (lung cell line sample)
0101120 (epithelial cell line sample)
0100762 (lung cancer cell line sample)
0102205 (large cell lung cancer cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0001041 (foregut)
UBERON:0008947 (respiratory primordium)
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000077,UBERON:0000118,UBERON:0000119,UBERON:0000170,UBERON:0000171,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000483,UBERON:0000915,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000926,UBERON:0001004,UBERON:0001007,UBERON:0001041,UBERON:0001048,UBERON:0001062,UBERON:0001555,UBERON:0002048,UBERON:0002050,UBERON:0002224,UBERON:0002532,UBERON:0003104,UBERON:0003258,UBERON:0004119,UBERON:0004120,UBERON:0004185,UBERON:0004921,UBERON:0005153,UBERON:0005178,UBERON:0005181,UBERON:0005423,UBERON:0005597,UBERON:0005911,UBERON:0007026,UBERON:0008947,UBERON:0009142
+|DRA_sample_Accession=CAGE@SAMD00005401
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000255,CL:0000548
+|accession_numbers=CAGE;DRX007911;DRR008783;DRZ000208;DRZ001593;DRZ011558;DRZ012943
-|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:305,DOID:4,DOID:7
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002048,UBERON:0002100,UBERON:0000483,UBERON:0000479,UBERON:0000064,UBERON:0004119,UBERON:0000466,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0004802,UBERON:0000025,UBERON:0005911,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0009569,UBERON:0005178,UBERON:0000072,UBERON:0005177,UBERON:0004807,UBERON:0000117,UBERON:0000171,UBERON:0000115,UBERON:0000464,UBERON:0005181,UBERON:0010317,UBERON:0000065,UBERON:0000170,UBERON:0001004,UBERON:0002224,UBERON:0000915
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0000082,CL:0000255
+|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:0050615,DOID:162,DOID:14566,DOID:0050687,DOID:1324,DOID:305,DOID:3905,DOID:3908,DOID:4556
+|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0100353,FF:0101120,FF:0100762,FF:0102205
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
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+|ffid_belonging_in_development=UBERON:0001041,UBERON:0008947,UBERON:0002532,UBERON:0006595,UBERON:0010316
 |fonse_cell_line=FF:0100353,FF:0101120
 |fonse_cell_line_closure=FF:0100353,FF:0101120
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/large%2520cell%2520lung%2520carcinoma%2520cell%2520line%253aIA-LM.CNhs11277.10509-107D5.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/large%2520cell%2520lung%2520carcinoma%2520cell%2520line%253aIA-LM.CNhs11277.10509-107D5.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/large%2520cell%2520lung%2520carcinoma%2520cell%2520line%253aIA-LM.CNhs11277.10509-107D5.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/large%2520cell%2520lung%2520carcinoma%2520cell%2520line%253aIA-LM.CNhs11277.10509-107D5.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/large%2520cell%2520lung%2520carcinoma%2520cell%2520line%253aIA-LM.CNhs11277.10509-107D5.hg38.nobarcode.ctss.bed.gz
 |id=FF:10509-107D5
-|is_a=EFO:0002091;;FF:0000003;;FF:0000210;;FF:0102205
+|is_a=EFO:0002091;;FF:0000210;;FF:0102205
+|is_obsolete=
+|library_id=CNhs11277
+|library_id_phase_based=2:CNhs11277
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10509
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10509
 |name=large cell lung carcinoma cell line:IA-LM
 |namespace=FANTOM5
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11277,LSID759,release008,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=107
 |rna_catalog_number=
@@ Line 57: / Line 78: @@
 |rna_weight_ug=47.79725
 |sample_age=68
+|sample_category=cell lines
 |sample_cell_catalog=RCB0554
 |sample_cell_line=IA-LM
@@ Line 69: / Line 91: @@
 |sample_ethnicity=J
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.98155559529362e-261!GO:0043226;organelle;2.04605240708489e-222!GO:0043229;intracellular organelle;7.0052048491696e-222!GO:0043231;intracellular membrane-bound organelle;1.0020823247643e-221!GO:0043227;membrane-bound organelle;1.47434050802968e-221!GO:0005737;cytoplasm;2.48311849872211e-162!GO:0044422;organelle part;3.6098039324482e-131!GO:0044446;intracellular organelle part;1.06357186992081e-129!GO:0005634;nucleus;5.72184929783584e-112!GO:0044444;cytoplasmic part;3.69942554711326e-111!GO:0044238;primary metabolic process;2.54066485636605e-110!GO:0043170;macromolecule metabolic process;2.54799252963166e-110!GO:0044237;cellular metabolic process;3.44005383479924e-107!GO:0032991;macromolecular complex;1.44189685289535e-92!GO:0030529;ribonucleoprotein complex;1.94315283479488e-87!GO:0044428;nuclear part;8.49338710583909e-85!GO:0003723;RNA binding;9.0656189767527e-85!GO:0043233;organelle lumen;1.66291203886166e-83!GO:0031974;membrane-enclosed lumen;1.66291203886166e-83!GO:0005515;protein binding;6.62065466728174e-78!GO:0010467;gene expression;8.13174263054927e-78!GO:0043283;biopolymer metabolic process;1.27346137950454e-76!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.03420435036109e-66!GO:0006396;RNA processing;8.00648264191128e-58!GO:0031981;nuclear lumen;4.59555199306863e-57!GO:0006412;translation;1.2675985039395e-53!GO:0005739;mitochondrion;8.04307932248004e-53!GO:0019538;protein metabolic process;1.65565109594938e-52!GO:0005840;ribosome;1.38366043023978e-51!GO:0003676;nucleic acid binding;1.72996304714457e-50!GO:0015031;protein transport;2.18608463906886e-47!GO:0044267;cellular protein metabolic process;4.01011428397285e-47!GO:0044260;cellular macromolecule metabolic process;5.21887493563995e-47!GO:0033036;macromolecule localization;1.00987510032479e-46!GO:0016043;cellular component organization and biogenesis;4.21839572017216e-46!GO:0016070;RNA metabolic process;4.21839572017216e-46!GO:0031090;organelle membrane;4.79393244916109e-45!GO:0003735;structural constituent of ribosome;1.28176693237539e-44!GO:0043234;protein complex;5.45115096326473e-44!GO:0045184;establishment of protein localization;5.56007823062802e-43!GO:0016071;mRNA metabolic process;4.93781710600788e-42!GO:0008104;protein localization;6.31612908697979e-42!GO:0033279;ribosomal subunit;3.51336123710551e-39!GO:0009059;macromolecule biosynthetic process;4.8655866829239e-39!GO:0008380;RNA splicing;2.71441464950336e-38!GO:0006397;mRNA processing;1.82053555486798e-36!GO:0044429;mitochondrial part;8.44389880229645e-36!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.30039983855123e-35!GO:0005654;nucleoplasm;6.54465857181362e-35!GO:0044249;cellular biosynthetic process;1.17442632438354e-34!GO:0009058;biosynthetic process;3.52841073459408e-34!GO:0005829;cytosol;7.74278798373647e-34!GO:0031967;organelle envelope;1.98855436710074e-33!GO:0046907;intracellular transport;2.22365320630044e-33!GO:0031975;envelope;3.2317611774852e-33!GO:0006886;intracellular protein transport;1.21819628491006e-30!GO:0044451;nucleoplasm part;8.16835680301107e-30!GO:0065003;macromolecular complex assembly;1.94617322607955e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.33534185735661e-29!GO:0006996;organelle organization and biogenesis;7.23214512152255e-28!GO:0022607;cellular component assembly;8.06932033629917e-27!GO:0000166;nucleotide binding;2.24216892235993e-26!GO:0005681;spliceosome;5.83132368426005e-26!GO:0043228;non-membrane-bound organelle;1.19569177776911e-25!GO:0043232;intracellular non-membrane-bound organelle;1.19569177776911e-25!GO:0005730;nucleolus;1.55764821824804e-24!GO:0006512;ubiquitin cycle;3.94909291883027e-24!GO:0044445;cytosolic part;5.88310937867062e-23!GO:0016874;ligase activity;3.54994812132794e-22!GO:0006259;DNA metabolic process;5.60998619713543e-22!GO:0005740;mitochondrial envelope;1.58065820037084e-21!GO:0051649;establishment of cellular localization;2.0555216072134e-21!GO:0008134;transcription factor binding;3.36837584905935e-21!GO:0051641;cellular localization;5.88303289179504e-21!GO:0006457;protein folding;6.749135890198e-21!GO:0016462;pyrophosphatase activity;1.56459198338728e-20!GO:0051603;proteolysis involved in cellular protein catabolic process;1.66634246779814e-20!GO:0015934;large ribosomal subunit;1.7347124093766e-20!GO:0050794;regulation of cellular process;1.74403257671026e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.6080048678279e-20!GO:0019941;modification-dependent protein catabolic process;3.0199634700391e-20!GO:0043632;modification-dependent macromolecule catabolic process;3.0199634700391e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;3.47140891108539e-20!GO:0031966;mitochondrial membrane;3.47140891108539e-20!GO:0012505;endomembrane system;4.18355723067677e-20!GO:0044257;cellular protein catabolic process;5.80926903965043e-20!GO:0017111;nucleoside-triphosphatase activity;5.90399963355173e-20!GO:0006511;ubiquitin-dependent protein catabolic process;7.72577791967685e-20!GO:0044265;cellular macromolecule catabolic process;1.17007352609173e-19!GO:0015935;small ribosomal subunit;1.3524732797322e-19!GO:0022618;protein-RNA complex assembly;1.4156966368231e-19!GO:0019866;organelle inner membrane;1.76660426835195e-19!GO:0043285;biopolymer catabolic process;6.25566260705355e-19!GO:0019222;regulation of metabolic process;2.15577755045456e-18!GO:0005743;mitochondrial inner membrane;5.35573986091638e-18!GO:0043412;biopolymer modification;9.49444612716371e-18!GO:0008135;translation factor activity, nucleic acid binding;1.31762354012368e-17!GO:0032553;ribonucleotide binding;2.10022783464161e-17!GO:0032555;purine ribonucleotide binding;2.10022783464161e-17!GO:0006119;oxidative phosphorylation;2.27587286484353e-17!GO:0017076;purine nucleotide binding;4.16205600376375e-17!GO:0031980;mitochondrial lumen;1.05487320441524e-16!GO:0005759;mitochondrial matrix;1.05487320441524e-16!GO:0048770;pigment granule;1.24088999502663e-16!GO:0042470;melanosome;1.24088999502663e-16!GO:0042254;ribosome biogenesis and assembly;1.77207085344955e-16!GO:0009057;macromolecule catabolic process;2.13096272025572e-16!GO:0006605;protein targeting;2.53761435926583e-16!GO:0030163;protein catabolic process;6.71553375603197e-16!GO:0006464;protein modification process;1.44992039609586e-15!GO:0000502;proteasome complex (sensu Eukaryota);2.01766918143428e-15!GO:0044455;mitochondrial membrane part;2.57879945634786e-15!GO:0004386;helicase activity;3.77347942242721e-15!GO:0005794;Golgi apparatus;4.02520364407431e-15!GO:0006350;transcription;5.05725706882146e-15!GO:0031323;regulation of cellular metabolic process;5.07664758315678e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.08483978264222e-15!GO:0051082;unfolded protein binding;1.28251748072165e-14!GO:0048193;Golgi vesicle transport;1.56340430843595e-14!GO:0050789;regulation of biological process;1.73398121019246e-14!GO:0003712;transcription cofactor activity;2.03536189486494e-14!GO:0044432;endoplasmic reticulum part;3.06170803484318e-14!GO:0007049;cell cycle;3.45807812577076e-14!GO:0005524;ATP binding;3.53051358710765e-14!GO:0006366;transcription from RNA polymerase II promoter;4.35266143870087e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.24229210991609e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;6.99403555402581e-14!GO:0000375;RNA splicing, via transesterification reactions;6.99403555402581e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.99403555402581e-14!GO:0005783;endoplasmic reticulum;7.05828682694737e-14!GO:0043687;post-translational protein modification;7.78121132263216e-14!GO:0032559;adenyl ribonucleotide binding;7.8805911151077e-14!GO:0016604;nuclear body;7.90322482773336e-14!GO:0006913;nucleocytoplasmic transport;1.07533195482323e-13!GO:0008639;small protein conjugating enzyme activity;1.44443391850769e-13!GO:0030554;adenyl nucleotide binding;1.98386904632401e-13!GO:0044248;cellular catabolic process;2.44001462020348e-13!GO:0006399;tRNA metabolic process;2.61276719626006e-13!GO:0031965;nuclear membrane;2.757485118964e-13!GO:0004842;ubiquitin-protein ligase activity;2.86322238238448e-13!GO:0051169;nuclear transport;2.89614502937935e-13!GO:0010468;regulation of gene expression;2.95944727427098e-13!GO:0005761;mitochondrial ribosome;2.95944727427098e-13!GO:0000313;organellar ribosome;2.95944727427098e-13!GO:0016192;vesicle-mediated transport;3.94322308745826e-13!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.85145167483384e-13!GO:0008026;ATP-dependent helicase activity;7.96882317463282e-13!GO:0019787;small conjugating protein ligase activity;8.41182601877943e-13!GO:0003743;translation initiation factor activity;8.73929817109527e-13!GO:0044453;nuclear membrane part;9.50705857264741e-13!GO:0005635;nuclear envelope;1.01242812137178e-12!GO:0005746;mitochondrial respiratory chain;1.21653019813183e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.00360899681121e-12!GO:0032774;RNA biosynthetic process;2.73033294567424e-12!GO:0006351;transcription, DNA-dependent;2.98675459292543e-12!GO:0006413;translational initiation;3.10948363235444e-12!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.0807327846294e-12!GO:0050136;NADH dehydrogenase (quinone) activity;6.52565701358556e-12!GO:0003954;NADH dehydrogenase activity;6.52565701358556e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.52565701358556e-12!GO:0016607;nuclear speck;9.04049717772978e-12!GO:0005643;nuclear pore;1.06838759551786e-11!GO:0006403;RNA localization;1.28528611201905e-11!GO:0006974;response to DNA damage stimulus;2.18815231857165e-11!GO:0050657;nucleic acid transport;2.50530047606857e-11!GO:0051236;establishment of RNA localization;2.50530047606857e-11!GO:0050658;RNA transport;2.50530047606857e-11!GO:0016881;acid-amino acid ligase activity;3.13764695822718e-11!GO:0045449;regulation of transcription;3.96171128478843e-11!GO:0006364;rRNA processing;4.42152094615198e-11!GO:0016072;rRNA metabolic process;5.69461062068747e-11!GO:0017038;protein import;5.91190877674458e-11!GO:0006446;regulation of translational initiation;6.89025748116634e-11!GO:0042623;ATPase activity, coupled;6.97496899705722e-11!GO:0016887;ATPase activity;7.66982235163267e-11!GO:0051186;cofactor metabolic process;1.46755901765752e-10!GO:0042775;organelle ATP synthesis coupled electron transport;1.55610221236263e-10!GO:0042773;ATP synthesis coupled electron transport;1.55610221236263e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;3.05364839522772e-10!GO:0030964;NADH dehydrogenase complex (quinone);3.54220168056041e-10!GO:0045271;respiratory chain complex I;3.54220168056041e-10!GO:0005747;mitochondrial respiratory chain complex I;3.54220168056041e-10!GO:0065002;intracellular protein transport across a membrane;5.9395597818939e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;5.9395597818939e-10!GO:0004812;aminoacyl-tRNA ligase activity;5.9395597818939e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;5.9395597818939e-10!GO:0012501;programmed cell death;7.25810994804478e-10!GO:0005789;endoplasmic reticulum membrane;7.80572411570701e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;7.81303371164757e-10!GO:0051276;chromosome organization and biogenesis;7.83934375108279e-10!GO:0006355;regulation of transcription, DNA-dependent;8.47292169119524e-10!GO:0006281;DNA repair;8.63089144336756e-10!GO:0006915;apoptosis;1.09434714352262e-09!GO:0022402;cell cycle process;1.11040452258104e-09!GO:0016568;chromatin modification;1.11040452258104e-09!GO:0016563;transcription activator activity;1.15383599272854e-09!GO:0006461;protein complex assembly;1.15601889309394e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;1.22504513578495e-09!GO:0065007;biological regulation;1.28204366766492e-09!GO:0005793;ER-Golgi intermediate compartment;1.28598393584651e-09!GO:0043038;amino acid activation;1.40587678922611e-09!GO:0006418;tRNA aminoacylation for protein translation;1.40587678922611e-09!GO:0043039;tRNA aminoacylation;1.40587678922611e-09!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.77264678468125e-09!GO:0051028;mRNA transport;1.80834369183884e-09!GO:0008565;protein transporter activity;2.48608563356629e-09!GO:0046930;pore complex;3.31523604174646e-09!GO:0005667;transcription factor complex;3.61368795881348e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.15480927281799e-09!GO:0006323;DNA packaging;4.55759857391688e-09!GO:0032446;protein modification by small protein conjugation;6.57040977730392e-09!GO:0016567;protein ubiquitination;8.19199160945591e-09!GO:0008219;cell death;8.30721568401931e-09!GO:0016265;death;8.30721568401931e-09!GO:0048523;negative regulation of cellular process;1.59926283759344e-08!GO:0006732;coenzyme metabolic process;1.66914869743108e-08!GO:0009259;ribonucleotide metabolic process;2.39970190907063e-08!GO:0003713;transcription coactivator activity;2.39970190907063e-08!GO:0006163;purine nucleotide metabolic process;2.72440366097927e-08!GO:0005768;endosome;2.9270248860598e-08!GO:0051170;nuclear import;3.75967079580692e-08!GO:0008270;zinc ion binding;3.75967079580692e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.91295714198975e-08!GO:0000278;mitotic cell cycle;4.23630533289762e-08!GO:0003724;RNA helicase activity;5.48157927567875e-08!GO:0051246;regulation of protein metabolic process;5.81986339591777e-08!GO:0006888;ER to Golgi vesicle-mediated transport;5.8695384510118e-08!GO:0031324;negative regulation of cellular metabolic process;8.19747766006282e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.58651995263178e-08!GO:0006606;protein import into nucleus;9.20109762130467e-08!GO:0006164;purine nucleotide biosynthetic process;9.58828069517121e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;1.41963243696777e-07!GO:0009150;purine ribonucleotide metabolic process;1.44790655532194e-07!GO:0009719;response to endogenous stimulus;1.72100324838682e-07!GO:0009260;ribonucleotide biosynthetic process;1.96633851498777e-07!GO:0000151;ubiquitin ligase complex;2.02795645229667e-07!GO:0016564;transcription repressor activity;2.54806326769298e-07!GO:0003924;GTPase activity;2.64896451055683e-07!GO:0044431;Golgi apparatus part;3.18109562049069e-07!GO:0009199;ribonucleoside triphosphate metabolic process;3.68006365576416e-07!GO:0051726;regulation of cell cycle;3.68006365576416e-07!GO:0016779;nucleotidyltransferase activity;3.83262015138552e-07!GO:0009141;nucleoside triphosphate metabolic process;4.651453271733e-07!GO:0006260;DNA replication;4.73269548127229e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.81964658815019e-07!GO:0009056;catabolic process;5.0292997762562e-07!GO:0009152;purine ribonucleotide biosynthetic process;5.17249882183251e-07!GO:0009142;nucleoside triphosphate biosynthetic process;5.21857982676494e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.21857982676494e-07!GO:0000074;regulation of progression through cell cycle;5.24412364035586e-07!GO:0043566;structure-specific DNA binding;5.51757801600647e-07!GO:0030120;vesicle coat;5.60165744533078e-07!GO:0030662;coated vesicle membrane;5.60165744533078e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.50939602543283e-07!GO:0009144;purine nucleoside triphosphate metabolic process;7.50939602543283e-07!GO:0031202;RNA splicing factor activity, transesterification mechanism;7.81473331760329e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.81473331760329e-07!GO:0048519;negative regulation of biological process;8.30507733638089e-07!GO:0000245;spliceosome assembly;9.53236248722566e-07!GO:0009055;electron carrier activity;1.07003289006883e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.11670794100388e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.11670794100388e-06!GO:0003714;transcription corepressor activity;1.1579914404716e-06!GO:0016740;transferase activity;1.19545006307977e-06!GO:0003677;DNA binding;1.28944216020494e-06!GO:0007005;mitochondrion organization and biogenesis;1.29960026271331e-06!GO:0009892;negative regulation of metabolic process;1.32922325258321e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.80594754691043e-06!GO:0015986;ATP synthesis coupled proton transport;1.9419637896342e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.9419637896342e-06!GO:0051427;hormone receptor binding;2.05805910981893e-06!GO:0048475;coated membrane;2.21974481260696e-06!GO:0030117;membrane coat;2.21974481260696e-06!GO:0042981;regulation of apoptosis;2.23020352247419e-06!GO:0005788;endoplasmic reticulum lumen;2.35450813367076e-06!GO:0016481;negative regulation of transcription;2.46739029308905e-06!GO:0043067;regulation of programmed cell death;2.5282734460924e-06!GO:0051188;cofactor biosynthetic process;2.9387983732506e-06!GO:0003697;single-stranded DNA binding;2.97444887702181e-06!GO:0044440;endosomal part;3.3300512442409e-06!GO:0010008;endosome membrane;3.3300512442409e-06!GO:0046914;transition metal ion binding;3.64157160471634e-06!GO:0008186;RNA-dependent ATPase activity;3.68442202382386e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;4.02459016266073e-06!GO:0035257;nuclear hormone receptor binding;4.49637675590617e-06!GO:0006793;phosphorus metabolic process;5.32364687631436e-06!GO:0006796;phosphate metabolic process;5.32364687631436e-06!GO:0009060;aerobic respiration;5.60655211944549e-06!GO:0019829;cation-transporting ATPase activity;5.69496500576519e-06!GO:0031988;membrane-bound vesicle;6.2313805673303e-06!GO:0015078;hydrogen ion transmembrane transporter activity;6.27782016857771e-06!GO:0005694;chromosome;6.30432518156733e-06!GO:0030532;small nuclear ribonucleoprotein complex;6.79896652231224e-06!GO:0006613;cotranslational protein targeting to membrane;6.86667656421453e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.7704221536747e-06!GO:0016023;cytoplasmic membrane-bound vesicle;8.49230101436429e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.40715114242563e-06!GO:0043623;cellular protein complex assembly;9.4423046973506e-06!GO:0005525;GTP binding;9.81338694337539e-06!GO:0045333;cellular respiration;1.02018662848669e-05!GO:0046034;ATP metabolic process;1.08139158995211e-05!GO:0044452;nucleolar part;1.09699037247369e-05!GO:0004004;ATP-dependent RNA helicase activity;1.18682055875838e-05!GO:0006752;group transfer coenzyme metabolic process;1.33186451126257e-05!GO:0003899;DNA-directed RNA polymerase activity;1.42549258123233e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.46188988748354e-05!GO:0006754;ATP biosynthetic process;1.50146559851547e-05!GO:0006753;nucleoside phosphate metabolic process;1.50146559851547e-05!GO:0045259;proton-transporting ATP synthase complex;1.63519514250508e-05!GO:0000139;Golgi membrane;1.75044546252538e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.22419839920423e-05!GO:0051168;nuclear export;2.46208268816339e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.48783356653304e-05!GO:0031982;vesicle;2.86466125438414e-05!GO:0022403;cell cycle phase;3.17866605666699e-05!GO:0008033;tRNA processing;3.29829385165239e-05!GO:0006402;mRNA catabolic process;3.6116834010802e-05!GO:0031410;cytoplasmic vesicle;4.27049068149773e-05!GO:0031252;leading edge;4.30033499168612e-05!GO:0065004;protein-DNA complex assembly;4.32491923157766e-05!GO:0016310;phosphorylation;4.66325142523381e-05!GO:0006352;transcription initiation;4.68389526042071e-05!GO:0009108;coenzyme biosynthetic process;5.13098181975975e-05!GO:0005770;late endosome;5.48903298505629e-05!GO:0043069;negative regulation of programmed cell death;5.58305139390212e-05!GO:0005762;mitochondrial large ribosomal subunit;5.79208181267261e-05!GO:0000315;organellar large ribosomal subunit;5.79208181267261e-05!GO:0000087;M phase of mitotic cell cycle;6.29261202101863e-05!GO:0000059;protein import into nucleus, docking;6.29261202101863e-05!GO:0009117;nucleotide metabolic process;6.88101937104679e-05!GO:0019899;enzyme binding;6.95306983956e-05!GO:0051301;cell division;6.98013234472232e-05!GO:0043066;negative regulation of apoptosis;7.4537009252632e-05!GO:0043021;ribonucleoprotein binding;7.47936292481378e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;7.67225578111374e-05!GO:0007067;mitosis;8.78599485702235e-05!GO:0045786;negative regulation of progression through cell cycle;9.28780093501322e-05!GO:0003690;double-stranded DNA binding;0.000101746846017794!GO:0032561;guanyl ribonucleotide binding;0.000104202985689243!GO:0019001;guanyl nucleotide binding;0.000104202985689243!GO:0004298;threonine endopeptidase activity;0.000106034354735187!GO:0008654;phospholipid biosynthetic process;0.000106070532368215!GO:0003729;mRNA binding;0.000114282704167436!GO:0016859;cis-trans isomerase activity;0.000142340945063791!GO:0000314;organellar small ribosomal subunit;0.000152568980630615!GO:0005763;mitochondrial small ribosomal subunit;0.000152568980630615!GO:0045454;cell redox homeostasis;0.000156844122981695!GO:0007243;protein kinase cascade;0.000160686816881769!GO:0005798;Golgi-associated vesicle;0.00017499721155336!GO:0030867;rough endoplasmic reticulum membrane;0.000176598825680956!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000179503395195485!GO:0015630;microtubule cytoskeleton;0.000180937886648849!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000187275497353405!GO:0006916;anti-apoptosis;0.000187275497353405!GO:0031072;heat shock protein binding;0.000199498174495767!GO:0016251;general RNA polymerase II transcription factor activity;0.000203093649022315!GO:0005813;centrosome;0.000203243182918422!GO:0044427;chromosomal part;0.000207390542332802!GO:0051789;response to protein stimulus;0.000213810142797936!GO:0006986;response to unfolded protein;0.000213810142797936!GO:0016787;hydrolase activity;0.000226418492461336!GO:0006891;intra-Golgi vesicle-mediated transport;0.000234258994556817!GO:0045941;positive regulation of transcription;0.000272532266558036!GO:0007264;small GTPase mediated signal transduction;0.000320105376895513!GO:0006401;RNA catabolic process;0.000353578046093455!GO:0006612;protein targeting to membrane;0.000365160540551797!GO:0006383;transcription from RNA polymerase III promoter;0.000401606718632482!GO:0006099;tricarboxylic acid cycle;0.000407851924469136!GO:0046356;acetyl-CoA catabolic process;0.000407851924469136!GO:0045045;secretory pathway;0.000409853846094769!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000422629849250677!GO:0030036;actin cytoskeleton organization and biogenesis;0.000442570182695722!GO:0003702;RNA polymerase II transcription factor activity;0.000454667084762928!GO:0006414;translational elongation;0.000472827456455967!GO:0000049;tRNA binding;0.000485216283780119!GO:0005815;microtubule organizing center;0.000501632193434696!GO:0005048;signal sequence binding;0.000535934322544147!GO:0008250;oligosaccharyl transferase complex;0.000543472446859838!GO:0030880;RNA polymerase complex;0.000615941591526972!GO:0033116;ER-Golgi intermediate compartment membrane;0.000620957956901053!GO:0006084;acetyl-CoA metabolic process;0.000636204440835835!GO:0043681;protein import into mitochondrion;0.000721138511299446!GO:0006333;chromatin assembly or disassembly;0.000722099285738353!GO:0004674;protein serine/threonine kinase activity;0.000726469129601233!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000750337436777127!GO:0051329;interphase of mitotic cell cycle;0.00075112190801851!GO:0005773;vacuole;0.000812323946587709!GO:0009109;coenzyme catabolic process;0.000845311019042499!GO:0048522;positive regulation of cellular process;0.000884655955629758!GO:0051325;interphase;0.000999623116586494!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00103439885609119!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00103663314690341!GO:0000428;DNA-directed RNA polymerase complex;0.00103663314690341!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00107350404134497!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00108886212337253!GO:0008361;regulation of cell size;0.00119876739066468!GO:0018196;peptidyl-asparagine modification;0.00120302201986268!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00120302201986268!GO:0005769;early endosome;0.00120302201986268!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00125496952637073!GO:0031625;ubiquitin protein ligase binding;0.00127441658944078!GO:0016363;nuclear matrix;0.00127918339174884!GO:0046966;thyroid hormone receptor binding;0.00129371140440179!GO:0045893;positive regulation of transcription, DNA-dependent;0.00130808026931209!GO:0006626;protein targeting to mitochondrion;0.00135450128974558!GO:0003711;transcription elongation regulator activity;0.00135981959520853!GO:0004576;oligosaccharyl transferase activity;0.00138793441779495!GO:0048500;signal recognition particle;0.00148530394672401!GO:0006338;chromatin remodeling;0.00159246199565926!GO:0016853;isomerase activity;0.00159460660904789!GO:0019867;outer membrane;0.00162413879923166!GO:0005905;coated pit;0.00164390060105874!GO:0005885;Arp2/3 protein complex;0.00165140930589012!GO:0045892;negative regulation of transcription, DNA-dependent;0.00165796401785859!GO:0003678;DNA helicase activity;0.00169744531792985!GO:0031968;organelle outer membrane;0.00171951031057187!GO:0048471;perinuclear region of cytoplasm;0.00171951031057187!GO:0003746;translation elongation factor activity;0.00176331714123665!GO:0019783;small conjugating protein-specific protease activity;0.00211480213530764!GO:0046474;glycerophospholipid biosynthetic process;0.00217100197256549!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0023204696282777!GO:0051187;cofactor catabolic process;0.00242869559435894!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00242869559435894!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00242869559435894!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00242869559435894!GO:0009116;nucleoside metabolic process;0.00250840603161982!GO:0051920;peroxiredoxin activity;0.00252260669255404!GO:0015980;energy derivation by oxidation of organic compounds;0.00253728582014199!GO:0006261;DNA-dependent DNA replication;0.00256062011804037!GO:0000323;lytic vacuole;0.00264859417512627!GO:0005764;lysosome;0.00264859417512627!GO:0033673;negative regulation of kinase activity;0.0027684491396084!GO:0006469;negative regulation of protein kinase activity;0.0027684491396084!GO:0016049;cell growth;0.00278713149974041!GO:0000785;chromatin;0.00278976348336322!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00286664900295028!GO:0030134;ER to Golgi transport vesicle;0.00290499086224304!GO:0004843;ubiquitin-specific protease activity;0.00294173562713325!GO:0005741;mitochondrial outer membrane;0.00307694426589325!GO:0051087;chaperone binding;0.00307694426589325!GO:0030029;actin filament-based process;0.0031312546592607!GO:0030521;androgen receptor signaling pathway;0.00319871151319278!GO:0008312;7S RNA binding;0.00319871151319278!GO:0030133;transport vesicle;0.00330462996878263!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00332697564002442!GO:0008168;methyltransferase activity;0.00353265657151895!GO:0016197;endosome transport;0.00359796274377696!GO:0051252;regulation of RNA metabolic process;0.0036061833046337!GO:0016741;transferase activity, transferring one-carbon groups;0.00365345872461142!GO:0006405;RNA export from nucleus;0.0038236131507733!GO:0000279;M phase;0.00387751932957885!GO:0004221;ubiquitin thiolesterase activity;0.00410705218577033!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0041806866988572!GO:0045047;protein targeting to ER;0.0041806866988572!GO:0007010;cytoskeleton organization and biogenesis;0.0041806866988572!GO:0016272;prefoldin complex;0.00427207790165191!GO:0003684;damaged DNA binding;0.00438040021038358!GO:0030127;COPII vesicle coat;0.00448104848144383!GO:0012507;ER to Golgi transport vesicle membrane;0.00448104848144383!GO:0009112;nucleobase metabolic process;0.00456986750563238!GO:0051348;negative regulation of transferase activity;0.00472920511650958!GO:0046483;heterocycle metabolic process;0.00477778034135613!GO:0030118;clathrin coat;0.00477883062820084!GO:0030132;clathrin coat of coated pit;0.00483748907412052!GO:0046489;phosphoinositide biosynthetic process;0.00490866849304319!GO:0005669;transcription factor TFIID complex;0.005085431323334!GO:0008139;nuclear localization sequence binding;0.005085431323334!GO:0006892;post-Golgi vesicle-mediated transport;0.00517916180244028!GO:0030658;transport vesicle membrane;0.00520258671647247!GO:0035258;steroid hormone receptor binding;0.00534733541474359!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00546602574076614!GO:0006354;RNA elongation;0.00586569064927784!GO:0006302;double-strand break repair;0.00592105731424747!GO:0008180;signalosome;0.00592963076713243!GO:0046467;membrane lipid biosynthetic process;0.00593967060620738!GO:0016790;thiolester hydrolase activity;0.00605289420671937!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00635672365266174!GO:0043284;biopolymer biosynthetic process;0.00646710679739335!GO:0006417;regulation of translation;0.00663277357980601!GO:0001558;regulation of cell growth;0.00666339291876447!GO:0019843;rRNA binding;0.00695672710177797!GO:0000082;G1/S transition of mitotic cell cycle;0.00719949848433146!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00742815032654607!GO:0051052;regulation of DNA metabolic process;0.00759753069385471!GO:0045792;negative regulation of cell size;0.00782484075020414!GO:0006650;glycerophospholipid metabolic process;0.00792256043865578!GO:0043624;cellular protein complex disassembly;0.00794519078873517!GO:0008022;protein C-terminus binding;0.00796417425521171!GO:0048487;beta-tubulin binding;0.00805414191494126!GO:0006310;DNA recombination;0.00809740999906701!GO:0006839;mitochondrial transport;0.00814034931245793!GO:0006611;protein export from nucleus;0.00815761196284866!GO:0009119;ribonucleoside metabolic process;0.00815761196284866!GO:0043022;ribosome binding;0.00855052988254503!GO:0007006;mitochondrial membrane organization and biogenesis;0.00861518571830245!GO:0009165;nucleotide biosynthetic process;0.00885152981112877!GO:0042802;identical protein binding;0.00898617480583051!GO:0065009;regulation of a molecular function;0.00906147266731984!GO:0005684;U2-dependent spliceosome;0.00910216451993426!GO:0003682;chromatin binding;0.00921845542724828!GO:0006376;mRNA splice site selection;0.0093215127622074!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0093215127622074!GO:0017166;vinculin binding;0.00933237726025465!GO:0006400;tRNA modification;0.0095842604320783!GO:0005791;rough endoplasmic reticulum;0.00962240276508679!GO:0016044;membrane organization and biogenesis;0.00967281637517873!GO:0007050;cell cycle arrest;0.00997194877704119!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00997979525238075!GO:0008234;cysteine-type peptidase activity;0.0101875033622426!GO:0030308;negative regulation of cell growth;0.0108639450299783!GO:0030660;Golgi-associated vesicle membrane;0.0109547721311363!GO:0051128;regulation of cellular component organization and biogenesis;0.0110321094305282!GO:0051059;NF-kappaB binding;0.0111523089986272!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0113498016756626!GO:0031124;mRNA 3'-end processing;0.0113498016756626!GO:0043407;negative regulation of MAP kinase activity;0.0113871638078327!GO:0005832;chaperonin-containing T-complex;0.0117979798100795!GO:0006144;purine base metabolic process;0.0118655919078907!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0125422154342261!GO:0008632;apoptotic program;0.0131878310414364!GO:0030663;COPI coated vesicle membrane;0.0133587929197126!GO:0030126;COPI vesicle coat;0.0133587929197126!GO:0007030;Golgi organization and biogenesis;0.0134536129613347!GO:0030384;phosphoinositide metabolic process;0.0136748906260721!GO:0043488;regulation of mRNA stability;0.014004471256106!GO:0043487;regulation of RNA stability;0.014004471256106!GO:0032984;macromolecular complex disassembly;0.0144291279112336!GO:0030176;integral to endoplasmic reticulum membrane;0.0147692822620063!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0151937937810077!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0151937937810077!GO:0030125;clathrin vesicle coat;0.0152110854496155!GO:0030665;clathrin coated vesicle membrane;0.0152110854496155!GO:0030137;COPI-coated vesicle;0.0157136336576062!GO:0032940;secretion by cell;0.0157136336576062!GO:0015631;tubulin binding;0.0158524336228798!GO:0032200;telomere organization and biogenesis;0.0164726831434193!GO:0000723;telomere maintenance;0.0164726831434193!GO:0006595;polyamine metabolic process;0.0167115911457333!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0169538936924774!GO:0030659;cytoplasmic vesicle membrane;0.017257445527067!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0174669741594234!GO:0030518;steroid hormone receptor signaling pathway;0.0180177659625695!GO:0031529;ruffle organization and biogenesis;0.0180502122861345!GO:0004527;exonuclease activity;0.0184095036595025!GO:0046128;purine ribonucleoside metabolic process;0.0184095036595025!GO:0042278;purine nucleoside metabolic process;0.0184095036595025!GO:0008097;5S rRNA binding;0.0188577476445818!GO:0001726;ruffle;0.0188577476445818!GO:0031902;late endosome membrane;0.0188577476445818!GO:0045926;negative regulation of growth;0.0191041489257612!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0192076148528161!GO:0015399;primary active transmembrane transporter activity;0.0192076148528161!GO:0031461;cullin-RING ubiquitin ligase complex;0.0196214365679557!GO:0032507;maintenance of cellular protein localization;0.0196952929769403!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0198108363346613!GO:0006378;mRNA polyadenylation;0.0200667649946847!GO:0007004;telomere maintenance via telomerase;0.0202032561097638!GO:0051540;metal cluster binding;0.0203207781975748!GO:0051536;iron-sulfur cluster binding;0.0203207781975748!GO:0031326;regulation of cellular biosynthetic process;0.0210800824372494!GO:0004003;ATP-dependent DNA helicase activity;0.0210800824372494!GO:0007034;vacuolar transport;0.0211165805687039!GO:0046983;protein dimerization activity;0.021231788923504!GO:0030119;AP-type membrane coat adaptor complex;0.0214225337836058!GO:0031123;RNA 3'-end processing;0.0214225337836058!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0216813468524271!GO:0005637;nuclear inner membrane;0.0217499967131293!GO:0043241;protein complex disassembly;0.0219143838287321!GO:0048144;fibroblast proliferation;0.0222205147912596!GO:0048145;regulation of fibroblast proliferation;0.0222205147912596!GO:0000209;protein polyubiquitination;0.0222853866916062!GO:0009451;RNA modification;0.0223510692673058!GO:0008094;DNA-dependent ATPase activity;0.022713861633918!GO:0006360;transcription from RNA polymerase I promoter;0.022763627208106!GO:0006497;protein amino acid lipidation;0.0228758480726637!GO:0030027;lamellipodium;0.022967585501062!GO:0032508;DNA duplex unwinding;0.0232421656804102!GO:0032392;DNA geometric change;0.0232421656804102!GO:0000075;cell cycle checkpoint;0.0233920626255108!GO:0008047;enzyme activator activity;0.0237092800554538!GO:0044433;cytoplasmic vesicle part;0.023888567810833!GO:0006984;ER-nuclear signaling pathway;0.0241358717653928!GO:0022411;cellular component disassembly;0.0242339231588192!GO:0031901;early endosome membrane;0.0243865237238573!GO:0005657;replication fork;0.0263047036073323!GO:0005819;spindle;0.0264788219368098!GO:0006289;nucleotide-excision repair;0.0269187338096848!GO:0030833;regulation of actin filament polymerization;0.0269654309204357!GO:0000123;histone acetyltransferase complex;0.0269973371454978!GO:0006458;'de novo' protein folding;0.0269973371454978!GO:0051084;'de novo' posttranslational protein folding;0.0269973371454978!GO:0008538;proteasome activator activity;0.0279505071014332!GO:0009303;rRNA transcription;0.0285071304937443!GO:0009967;positive regulation of signal transduction;0.0286762652982571!GO:0022408;negative regulation of cell-cell adhesion;0.0292312728790785!GO:0012506;vesicle membrane;0.0293542819152251!GO:0007265;Ras protein signal transduction;0.0295371057329201!GO:0048146;positive regulation of fibroblast proliferation;0.0297825092728139!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0299074614099037!GO:0009893;positive regulation of metabolic process;0.0299915841182371!GO:0000096;sulfur amino acid metabolic process;0.0299915841182371!GO:0048518;positive regulation of biological process;0.0300196647414849!GO:0022415;viral reproductive process;0.0302457169497976!GO:0051101;regulation of DNA binding;0.0304182742933312!GO:0046822;regulation of nucleocytoplasmic transport;0.0304799101915!GO:0017134;fibroblast growth factor binding;0.030561422424488!GO:0030433;ER-associated protein catabolic process;0.0314756602486308!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0314756602486308!GO:0030131;clathrin adaptor complex;0.0315514836500242!GO:0009889;regulation of biosynthetic process;0.0319273233356832!GO:0042809;vitamin D receptor binding;0.0323519726944803!GO:0005083;small GTPase regulator activity;0.0328892174097182!GO:0047485;protein N-terminus binding;0.0329055128319957!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0331928916096017!GO:0015002;heme-copper terminal oxidase activity;0.0331928916096017!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0331928916096017!GO:0004129;cytochrome-c oxidase activity;0.0331928916096017!GO:0003725;double-stranded RNA binding;0.0331928916096017!GO:0008637;apoptotic mitochondrial changes;0.0332667428799482!GO:0000339;RNA cap binding;0.0332677149791203!GO:0043189;H4/H2A histone acetyltransferase complex;0.0340483651270637!GO:0005784;translocon complex;0.0344030415724292!GO:0008092;cytoskeletal protein binding;0.0346049835220161!GO:0040029;regulation of gene expression, epigenetic;0.0349742351330691!GO:0004532;exoribonuclease activity;0.0351007755334904!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0351007755334904!GO:0005732;small nucleolar ribonucleoprotein complex;0.0353484126191775!GO:0000287;magnesium ion binding;0.0360861908964155!GO:0016579;protein deubiquitination;0.0361650018140795!GO:0000178;exosome (RNase complex);0.0368351296086473!GO:0042026;protein refolding;0.0370466962316253!GO:0051539;4 iron, 4 sulfur cluster binding;0.0371985797530188!GO:0051651;maintenance of cellular localization;0.0375127356956911!GO:0042393;histone binding;0.0378788712297949!GO:0043130;ubiquitin binding;0.0380123442520046!GO:0032182;small conjugating protein binding;0.0380123442520046!GO:0000118;histone deacetylase complex;0.0383369091030424!GO:0016791;phosphoric monoester hydrolase activity;0.0387497223906193!GO:0005869;dynactin complex;0.0387497223906193!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0389044212348027!GO:0040008;regulation of growth;0.0389786214815339!GO:0006506;GPI anchor biosynthetic process;0.0389979134358744!GO:0004860;protein kinase inhibitor activity;0.0390910307681155!GO:0000152;nuclear ubiquitin ligase complex;0.0391352096175964!GO:0008536;Ran GTPase binding;0.0394954676175324!GO:0015992;proton transport;0.0395318023365475!GO:0051287;NAD binding;0.0395753720643621!GO:0016311;dephosphorylation;0.0395753720643621!GO:0006818;hydrogen transport;0.0395754064030892!GO:0050662;coenzyme binding;0.0401894737395502!GO:0000776;kinetochore;0.0402972130025432!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0408831602029281!GO:0050681;androgen receptor binding;0.0416113928789855!GO:0005874;microtubule;0.0417102507671286!GO:0046588;negative regulation of calcium-dependent cell-cell adhesion;0.0417705604313791!GO:0046586;regulation of calcium-dependent cell-cell adhesion;0.0417705604313791!GO:0008017;microtubule binding;0.0421418920372117!GO:0006505;GPI anchor metabolic process;0.0421418920372117!GO:0007041;lysosomal transport;0.0426915797544974!GO:0030224;monocyte differentiation;0.0437369040890469!GO:0007162;negative regulation of cell adhesion;0.0450063490275177!GO:0007021;tubulin folding;0.0455857040273794!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0457178191074525!GO:0008286;insulin receptor signaling pathway;0.0459304494494055!GO:0004177;aminopeptidase activity;0.0466542437872564!GO:0006607;NLS-bearing substrate import into nucleus;0.0477543736522781!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0483345372698045!GO:0032040;small subunit processome;0.0484499905747619!GO:0005521;lamin binding;0.0486802462609223!GO:0000781;chromosome, telomeric region;0.0486924088358751!GO:0006268;DNA unwinding during replication;0.0496006528294589
 |sample_id=10509
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=lung
 |top_motifs=AHR_ARNT_ARNT2:1.54132959411;FOX{I1,J2}:1.44667214087;bHLH_family:1.35127874078;HIF1A:1.15947576911;HBP1_HMGB_SSRP1_UBTF:1.15783095738;ZNF148:1.12264355923;PITX1..3:1.08085003112;NANOG:1.07188089216;NKX2-1,4:1.02893848727;FOXQ1:1.01506141424;RXR{A,B,G}:1.00523282236;CRX:0.934420979964;MYOD1:0.933261821374;YY1:0.910688540448;STAT1,3:0.868571955564;PPARG:0.818251321299;ELK1,4_GABP{A,B1}:0.797510886804;FOX{D1,D2}:0.773382285596;ZNF143:0.758411076821;ONECUT1,2:0.752799448002;HOXA9_MEIS1:0.751215113903;MZF1:0.737492442539;FOXA2:0.728567930053;NKX6-1,2:0.685731912662;ADNP_IRX_SIX_ZHX:0.684401784663;EN1,2:0.657547287557;SOX17:0.648191458979;STAT5{A,B}:0.647539081537;FOXP1:0.593647064362;POU1F1:0.50685893235;CDC5L:0.462107247887;FOX{F1,F2,J1}:0.451510872067;BACH2:0.450289149505;RBPJ:0.44705147368;NRF1:0.413299782364;FOXM1:0.396797444565;IRF7:0.372183323881;FOS_FOS{B,L1}_JUN{B,D}:0.357255646581;HOX{A4,D4}:0.356461807712;TEF:0.355004940444;PATZ1:0.337895473476;NKX2-3_NKX2-5:0.313861486669;TEAD1:0.310302106298;XBP1:0.300396324209;FOSL2:0.271476373479;CDX1,2,4:0.262793379795;RORA:0.260208208975;NFE2:0.246962726165;MED-1{core}:0.234327260992;PAX8:0.229152320917;ALX1:0.217025017244;FOXD3:0.21650378029;TBX4,5:0.215152610523;HES1:0.209773845792;CUX2:0.203420581788;PDX1:0.197114056641;RREB1:0.19603888347;MYB:0.18366671297;TFDP1:0.178926602784;TLX2:0.175685421636;LHX3,4:0.169491440944;ZBTB16:0.164078667981;SNAI1..3:0.164039425082;EVI1:0.153687940206;ZFP161:0.136296771178;FOXN1:0.129520546315;PRRX1,2:0.124186808401;ZIC1..3:0.122874842329;IRF1,2:0.107571016127;SPZ1:0.104089719368;ESRRA:0.0881350768348;NFE2L2:0.0834990130125;ATF5_CREB3:0.0813659364789;PAX2:0.0637073703743;RFX2..5_RFXANK_RFXAP:0.0621221188323;PAX3,7:0.0615094503322;ATF4:0.0613130642213;ZEB1:0.0403567829533;HOX{A6,A7,B6,B7}:0.0397522375013;REST:0.0265787698123;EGR1..3:0.018870983107;CEBPA,B_DDIT3:0.0158374282134;NFIL3:0.00771641820761;GLI1..3:0.00533271850311;NFKB1_REL_RELA:0.00388800093181;HSF1,2:-0.00196961857021;GTF2A1,2:-0.00896720637345;ELF1,2,4:-0.0128422484671;LEF1_TCF7_TCF7L1,2:-0.0163199203156;HOX{A5,B5}:-0.0217206703453;ZBTB6:-0.0377927791545;GTF2I:-0.0411610877555;OCT4_SOX2{dimer}:-0.0442355459341;NKX3-1:-0.0496472951492;SOX5:-0.0506954509978;VSX1,2:-0.0530562263515;SOX2:-0.05546735448;MTF1:-0.0811647606314;NKX3-2:-0.0862233252348;PRDM1:-0.0964976587916;NHLH1,2:-0.0971489992061;TLX1..3_NFIC{dimer}:-0.102848710102;TOPORS:-0.104923434688;POU6F1:-0.109161703546;MAZ:-0.114128639565;GZF1:-0.118886858545;TFAP2{A,C}:-0.145417920659;RUNX1..3:-0.147827636897;NR1H4:-0.155633437029;ARID5B:-0.158398635553;HMGA1,2:-0.167685211437;TFAP2B:-0.174132856164;TFCP2:-0.181718842817;SRF:-0.186760224633;HNF1A:-0.187629328667;HLF:-0.196961801101;EBF1:-0.200913677744;ETS1,2:-0.202494887825;SPIB:-0.211619958847;BREu{core}:-0.221881399345;BPTF:-0.224172834084;ALX4:-0.228047263728;TP53:-0.244429766022;NR3C1:-0.253698351265;FOXP3:-0.254030509923;E2F1..5:-0.25603120118;RFX1:-0.257710211689;STAT2,4,6:-0.25817862183;DBP:-0.258659123842;CREB1:-0.259617670484;RXRA_VDR{dimer}:-0.261712426063;GATA4:-0.266386678;GCM1,2:-0.27438584674;PAX4:-0.299345218642;NR6A1:-0.31308773317;GATA6:-0.313881139056;PAX6:-0.318605130931;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.323136934368;MEF2{A,B,C,D}:-0.335593906344;FOXO1,3,4:-0.341714127817;MYBL2:-0.342737253554;ESR1:-0.345062774887;TAL1_TCF{3,4,12}:-0.349489860817;FOXL1:-0.354911461103;AIRE:-0.357863357415;LMO2:-0.366182172824;KLF4:-0.373130270084;PAX5:-0.376765185442;XCPE1{core}:-0.397239737836;DMAP1_NCOR{1,2}_SMARC:-0.398503952551;AR:-0.424977359835;MTE{core}:-0.430428766404;SPI1:-0.437106748677;TFAP4:-0.446602714437;NFATC1..3:-0.454785175546;POU2F1..3:-0.456220560202;HNF4A_NR2F1,2:-0.457583689455;JUN:-0.469587325869;SP1:-0.503074497223;NFE2L1:-0.503891352478;HIC1:-0.538253253143;IKZF1:-0.550702764843;NFIX:-0.553725755518;SREBF1,2:-0.559097285579;SOX{8,9,10}:-0.572874551705;GFI1B:-0.57648580549;TGIF1:-0.614140033892;ATF6:-0.619899342905;UFEwm:-0.622822711755;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.629151601978;HAND1,2:-0.686208474575;PBX1:-0.694094861013;NR5A1,2:-0.70330883458;NFY{A,B,C}:-0.712212591027;MYFfamily:-0.72517803714;ZNF384:-0.729728415863;MAFB:-0.757368417156;ATF2:-0.777833402634;GFI1:-0.805644699536;IKZF2:-0.817694429667;EP300:-0.826233193677;ZNF238:-0.880662253901;POU5F1:-0.901477127199;TBP:-0.904146336713;NKX2-2,8:-0.910758493892;ZNF423:-1.01527660746;HMX1:-1.02459720973;PAX1,9:-1.14658729991;NANOG{mouse}:-1.14706393227;POU3F1..4:-1.32129312148;T:-1.47022655709;SMAD1..7,9:-1.56588400523
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10509-107D5;search_select_hide=table117:FF:10509-107D5
 }}

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FF:10509-107D5: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 14:27, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0