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{{f5samples
{{f5samples
|id=FF:14329-155E9
|DRA_sample_Accession=CAGE@SAMD00005754
|name=Fibroblast - skin dystrophia myotonica, donor1 (nuclear fraction)
|accession_numbers=CAGE;DRX008035;DRR008907;DRZ000332;DRZ001717;DRZ011682;DRZ013067
|sample_id=14329
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002097,UBERON:0002199,UBERON:0002384,UBERON:0000479,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003102,UBERON:0002416
|rna_tube_id=155E9
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002620
|rna_box=155
|ancestors_in_disease_facet=DOID:4,DOID:17,DOID:450,DOID:7,DOID:66,DOID:423,DOID:0080000,DOID:11722
|rna_position=E9
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000057,FF:0000250,FF:0000001,FF:0000408,FF:0000350,FF:0000253,FF:0000406,FF:0000667
|sample_cell_lot=GM04602
|comment=
|sample_cell_catalog=N/A
|created_by=
|sample_company=Coriell
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=custom
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr1:197886461..197886558,+!p1@LHX9!2.85!710.74!LHX9;;chr7:19157248..19157268,-!p1@TWIST1!1.81!170.24!TWIST1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.74!54.18!HOXC5;;chr9:132427883..132427951,+!p2@PRRX2!1.58!36.77!PRRX2;;chr15:57511609..57511651,+!p2@TCF12!1.46!45.56!TCF12;;chr1:170632285..170632309,+!p1@PRRX1!1.46!31.21!PRRX1;;chr5:72744594..72744609,-!p1@FOXD1!1.42!112.48!FOXD1;;chr2:102091566..102091581,-!p1@RFX8!1.41!24.76!RFX8;;chr1:197886421..197886432,+!p2@LHX9!1.38!22.96!LHX9;;chr2:177001290..177001315,+!p1@HOXD3!1.36!21.71!HOXD3;;chr8:67525443..67525459,-!p2@MYBL1!1.35!31.39!MYBL1;;chr15:37392534..37392562,-!p10@MEIS2!1.33!22.42!MEIS2;;chr11:46299539..46299620,+!p2@CREB3L1!1.31!32.83!CREB3L1;;chr1:170633348..170633399,+!p2@PRRX1!1.27!24.04!PRRX1;;chr10:119303078..119303169,+!p2@EMX2!1.25!16.68!EMX2;;chr11:46299199..46299233,+!p1@CREB3L1!1.24!83.95!CREB3L1;;chr5:2751762..2751784,-!p1@IRX2!1.23!15.97!IRX2;;chr8:93074803..93074845,-!p1@RUNX1T1!1.22!15.79!RUNX1T1;;chr1:197886665..197886732,+!p3@LHX9!1.22!15.43!LHX9;;chr9:132427972..132428056,+!p1@PRRX2!1.19!18.84!PRRX2;;chr1:170633262..170633285,+!p3@PRRX1!1.16!15.43!PRRX1;;chr15:37392616..37392638,-!p2@MEIS2!1.15!40.54!MEIS2;;chr2:176973498..176973524,+!p1@HOXD10!1.15!13.27!HOXD10;;chr7:44143925..44143970,+!p1@AEBP1!1.14!285.23!AEBP1;;chr7:44143978..44143989,+!p2@AEBP1!1.14!23.68!AEBP1;;chr15:37392703..37392717,-!p8@MEIS2!1.13!17.76!MEIS2;;chr15:37392724..37392757,-!p1@MEIS2!1.11!54.71!MEIS2;;chr21:36260773..36260804,-!p7@RUNX1!1.11!16.15!RUNX1;;chr6:10415276..10415341,-!p2@TFAP2A!1.10!14.17!TFAP2A;;chr6:19837592..19837621,+!p1@ID4!1.08!67.27!ID4;;chr1:170632959..170632987,+!p4@PRRX1!1.08!12.20!PRRX1;;chr2:176969097..176969109,+!p3@HOXD11!1.08!11.12!HOXD11;;chr20:50179368..50179392,-!p2@NFATC2!1.07!13.99!NFATC2;;chr5:321810..321877,+!p1@AHRR!1.06!33.73!AHRR;;chr5:158526917..158526932,-!p1@EBF1!1.03!24.40!EBF1;;chr2:172949484..172949522,+!p1@DLX1!1.03!9.69!DLX1;;chr2:176969228..176969260,+!p1@HOXD11!1.03!9.69!HOXD11;;chr10:63809106..63809127,+!p1@ARID5B!1.01!126.47!ARID5B;;chr12:66218598..66218645,+!p2@HMGA2!1.01!43.95!HMGA2;;chr2:200322654..200322707,-!p2@SATB2!1.01!13.45!SATB2;;chr15:37392576..37392589,-!p12@MEIS2!1.00!11.12!MEIS2;;chr11:44331576..44331650,-!p1@ALX4!1.00!8.97!ALX4;;chr4:81118647..81118666,+!p1@PRDM8!0.99!11.66!PRDM8;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.98!8.61!HOXC5;;chr8:93074848..93074871,-!p3@RUNX1T1!0.98!8.61!RUNX1T1;;chr20:55204351..55204377,+!p1@TFAP2C!0.97!10.58!TFAP2C;;chr10:28034739..28034756,-!p1@MKX!0.97!8.43!MKX;;chr4:174451370..174451387,-!p1@HAND2!0.97!8.43!HAND2;;chr3:147111231..147111281,+!p3@ZIC1!0.97!8.25!ZIC1;;chr5:3595977..3595999,+!p1@IRX1!0.95!7.89!IRX1;;chr6:85474198..85474212,-!p3@TBX18!0.95!7.89!TBX18;;chr7:27192185..27192209,-!p1@HOXA3!0.95!7.89!HOXA3;;chrX:591524..591527,+!p1@SHOX!0.95!7.89!SHOX;;chr12:124873357..124873401,-!p1@NCOR2!0.94!93.10!NCOR2;;chr15:37390850..37390909,-!p3@MEIS2!0.94!15.61!MEIS2;;chr6:85474299..85474324,-!p1@TBX18!0.94!14.17!TBX18;;chr2:223163706..223163730,-!p1@PAX3!0.94!7.71!PAX3;;chr14:61116183..61116208,-!p1@SIX1!0.93!29.42!SIX1;;chr4:95128841..95128865,+!p4@SMARCAD1!0.92!15.61!SMARCAD1;;chr2:102091144..102091183,-!p2@RFX8!0.92!7.35!RFX8;;chr2:19558373..19558392,-!p1@OSR1!0.91!20.09!OSR1;;chr7:44143997..44144008,+!p3@AEBP1!0.91!9.15!AEBP1;;chr3:157823517..157823562,-!p1@SHOX2!0.91!7.71!SHOX2;;chr19:47523058..47523114,+!p1@NPAS1!0.91!7.18!NPAS1;;chr10:114710244..114710257,+!p3@TCF7L2!0.90!19.73!TCF7L2;;chr7:27205136..27205164,-!p1@HOXA9!0.90!7.00!HOXA9;;chr3:114343768..114343822,-!p1@ZBTB20!0.89!30.86!ZBTB20;;chr14:24837368..24837401,+!p1@NFATC4!0.89!16.50!NFATC4;;chr5:72744445..72744466,-!p2@FOXD1!0.89!11.66!FOXD1;;chr1:170632723..170632739,+!p8@PRRX1!0.89!6.82!PRRX1;;chr12:114843940..114843955,-!p2@TBX5!0.89!6.82!TBX5;;chr12:54402745..54402788,+!p1@HOXC8!0.89!6.82!HOXC8;;chr19:13134772..13134822,+!p2@NFIX!0.88!9.87!NFIX;;chr1:170632477..170632506,+!p6@PRRX1!0.88!6.64!PRRX1;;chr3:37217736..37217753,-!p2@LRRFIP2!0.87!27.98!LRRFIP2;;chr6:10412600..10412637,-!p1@TFAP2A!0.87!10.94!TFAP2A;;chr1:170632250..170632277,+!p7@PRRX1!0.87!6.46!PRRX1;;chr11:46316699..46316719,+!p10@CREB3L1!0.87!6.46!CREB3L1;;chr2:121493425..121493474,+!p1@GLI2!0.86!14.17!GLI2;;chr15:37390482..37390572,-!p7@MEIS2!0.86!8.79!MEIS2;;chr5:72743793..72743855,-!p4@FOXD1!0.86!7.35!FOXD1;;chr3:147111198..147111225,+!p4@ZIC1!0.86!6.28!ZIC1;;chr19:45971246..45971265,+!p1@FOSB!0.85!120.19!FOSB;;chr1:170633058..170633084,+!p5@PRRX1!0.85!6.10!PRRX1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!0.85!6.10!ZBED1;;chr12:80085061..80085119,-!p6@PAWR!0.84!9.69!PAWR;;chr15:37392593..37392607,-!p13@MEIS2!0.84!7.18!MEIS2;;chr3:25470156..25470227,+!p2@RARB!0.84!5.92!RARB;;chr12:53614115..53614154,-!p1@RARG!0.83!33.01!RARG;;chr2:172967276..172967296,-!p3@DLX2!0.82!5.56!DLX2;;chr2:121493492..121493537,+!p2@GLI2!0.81!9.51!GLI2;;chr18:53068911..53068935,-!p4@TCF4!0.81!6.28!TCF4;;chr6:144329384..144329405,-!p1@PLAGL1!0.80!67.63!PLAGL1;;chr11:65686802..65686818,+!p6@DRAP1!0.80!9.69!DRAP1;;chr3:141121847..141121868,+!p5@ZBTB38!0.80!8.43!ZBTB38;;chr3:147127142..147127168,+!p1@ZIC1!0.80!5.38!ZIC1;;chr5:158527104..158527135,-!p4@EBF1!0.80!5.38!EBF1;;chr16:51185172..51185197,-!p1@SALL1!0.80!5.38!SALL1;;chr15:37390374..37390422,-!p9@MEIS2!0.79!6.46!MEIS2;;chr2:176969124..176969155,+!p5@HOXD11!0.79!5.20!HOXD11;;chr14:62162258..62162269,+!p2@HIF1A!0.78!53.46!HIF1A;;chr12:115121962..115121987,-!p1@TBX3!0.78!46.10!TBX3;;chr11:65686732..65686756,+!p2@DRAP1!0.78!23.14!DRAP1;;chr19:22817119..22817145,+!p1@ZNF492!0.78!8.79!ZNF492;;chr4:174450089..174450153,-!p2@HAND2!0.78!5.02!HAND2;;chr5:2751785..2751808,-!p2@IRX2!0.78!5.02!IRX2;;chr1:170632439..170632465,+!p11@PRRX1!0.78!5.02!PRRX1;;chr12:124873852..124873881,-!p3@NCOR2!0.77!32.29!NCOR2;;chr11:12696071..12696086,+!p3@TEAD1!0.77!6.64!TEAD1;;chr15:83953397..83953425,-!p1@BNC1!0.77!5.74!BNC1;;chr2:102091514..102091528,-!p6@RFX8!0.77!4.84!RFX8;;chr2:177001336..177001357,+!p2@HOXD3!0.77!4.84!HOXD3;;chr7:150945754..150945789,-!p2@SMARCD3!0.76!15.79!SMARCD3;;chr3:71630980..71631110,-!p3@FOXP1!0.75!17.76!FOXP1;;chr12:66218255..66218304,+!p3@HMGA2!0.75!13.45!HMGA2;;chr10:63809077..63809089,+!p5@ARID5B!0.75!10.76!ARID5B;;chr6:85473156..85473210,-!p2@TBX18!0.75!5.74!TBX18;;chr2:85981107..85981120,+!p3@ATOH8!0.75!4.66!ATOH8;;chr10:63661437..63661465,+!p2@ARID5B!0.74!95.61!ARID5B;;chr5:72744562..72744573,-!p3@FOXD1!0.74!5.74!FOXD1;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.74!4.84!GLIS1;;chr20:55205825..55205847,+!p2@TFAP2C!0.74!4.48!TFAP2C;;chr6:134210243..134210257,+!p1@TCF21!0.74!4.48!TCF21;;chr13:37494275..37494304,-!p2@SMAD9!0.74!4.48!SMAD9;;chr10:63809013..63809041,+!p3@ARID5B!0.73!26.91!ARID5B;;chr18:22932080..22932170,-!p1@ZNF521!0.73!20.27!ZNF521;;chr16:73092898..73092931,-!p1@ZFHX3!0.73!18.66!ZFHX3;;chr7:137686763..137686784,-!p5@CREB3L2!0.73!8.07!CREB3L2;;chr5:43067636..43067674,+!p6@ZNF131!0.73!6.10!ZNF131;;chr19:16435625..16435682,+!p1@KLF2!0.72!154.45!KLF2;;chr1:158979792..158979814,+!p2@IFI16!0.72!45.74!IFI16;;chr5:176738887..176738934,-!p1@MXD3!0.72!31.93!MXD3;;chr7:27213893..27213954,-!p1@HOXA10!0.72!4.31!HOXA10;;chr8:93115584..93115642,-!p5@RUNX1T1!0.72!4.31!RUNX1T1;;chr19:9609272..9609297,-!p1@ZNF560!0.72!4.31!ZNF560;;chr12:114845810..114845824,-!p1@TBX5!0.72!4.31!TBX5;;chr2:176969179..176969226,+!p2@HOXD11!0.72!4.31!HOXD11;;chr17:41277372..41277418,-!p1@BRCA1!0.71!16.68!BRCA1;;chr8:67525473..67525518,-!p1@MYBL1!0.71!10.23!MYBL1;;chr19:19729477..19729542,-!p1@PBX4!0.71!9.51!PBX4;;chr1:151431811..151431832,-!p3@POGZ!0.71!7.18!POGZ;;chr19:31840130..31840160,-!p2@TSHZ3!0.71!6.82!TSHZ3;;chr7:1577111..1577132,+!p4@MAFK!0.71!4.66!MAFK;;chr2:176994408..176994492,+!p1@HOXD8!0.71!4.13!HOXD8;;chr5:137804484..137804498,+!p2@EGR1!0.70!17.94!EGR1;;chr14:73360799..73360817,-!p1@DPF3!0.70!15.43!DPF3;;chr21:36259445..36259519,-!p4@RUNX1!0.70!12.38!RUNX1;;chr9:3525727..3525828,-!p2@RFX3!0.70!11.12!RFX3;;chr2:71127699..71127744,+!p1@VAX2!0.70!8.97!VAX2;;chr2:208031943..208031978,-!p5@KLF7!0.70!5.56!KLF7;;chr11:65687222..65687240,+!p7@DRAP1!0.70!5.38!DRAP1;;chr5:137801160..137801176,+!p1@EGR1!0.69!443.81!EGR1;;chr9:99180617..99180658,-!p1@ZNF367!0.69!9.33!ZNF367;;chr2:200323414..200323455,-!p1@SATB2!0.69!9.15!SATB2;;chr15:37391588..37391604,-!p11@MEIS2!0.69!5.20!MEIS2;;chr6:10412392..10412409,-!p4@TFAP2A!0.69!4.48!TFAP2A;;chr7:27224842..27224872,-!p1@HOXA11!0.69!3.95!HOXA11;;chr2:172967242..172967265,-!p2@DLX2!0.69!3.95!DLX2;;chr4:111558135..111558198,-!p2@PITX2!0.69!3.95!PITX2;;chr12:54410948..54410992,+!p3@HOXC5!0.69!3.95!HOXC5;;chr2:239756671..239756732,+!p1@TWIST2!0.68!13.45!TWIST2;;chr8:60031619..60031676,-!p1@TOX!0.68!8.97!TOX;;chr5:158527139..158527161,-!p5@EBF1!0.68!3.77!EBF1;;chr7:27205106..27205134,-!p2@HOXA9!0.68!3.77!HOXA9;;chr2:177001366..177001379,+!p4@HOXD3!0.68!3.77!HOXD3;;chr1:119530493..119530572,-!p1@TBX15!0.68!3.77!TBX15;;chr1:44513995..44514031,+!p1@KLF17!0.68!3.77!KLF17;;chr16:31076332..31076388,-!p3@ZNF668!0.68!3.77!ZNF668;;chr18:52969674..52969685,-!p24@TCF4!0.68!3.77!TCF4;;chr10:119302645..119302712,+!p3@EMX2!0.68!3.77!EMX2;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.67!19.19!TAL1;;chr12:66218378..66218401,+!p6@HMGA2!0.66!5.92!HMGA2;;chr5:158526459..158526481,-!p2@EBF1!0.66!5.02!EBF1;;chr8:93115274..93115323,-!p4@RUNX1T1!0.66!3.59!RUNX1T1;;chr1:119530706..119530736,-!p3@TBX15!0.66!3.59!TBX15;;chr1:170632137..170632172,+!p10@PRRX1!0.66!3.59!PRRX1;;chr2:172950227..172950249,+!p2@DLX1!0.66!3.59!DLX1;;chr15:66995062..66995065,+!p8@SMAD6!0.66!3.59!SMAD6;;chrX:128657457..128657475,-!p1@SMARCA1!0.65!46.64!SMARCA1;;chr12:80085255..80085284,-!p9@PAWR!0.65!5.38!PAWR;;chr16:54964740..54964789,+!p1@IRX5!0.65!5.38!IRX5;;chr11:46299186..46299195,+!p3@CREB3L1!0.65!3.95!CREB3L1;;chr19:23433144..23433204,-!p1@ZNF724P!0.64!17.58!ZNF724P;;chr21:36421535..36421610,-!p2@RUNX1!0.64!13.63!RUNX1;;chr1:200379104..200379128,-!p2@ZNF281!0.64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|sample_dev_stage=
|ffid_belonging_in_development=CL:0000134
|sample_tissue=skin
|sample_donor(cell lot)=
|sample_sex=F
|sample_age=2 year old child
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=2.06
|rna_od260/280=2.1
|sample_cell_type=fibroblast
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=nuclear RNA
|sample_disease=DYSTROPHIA MYOTONICA 1; DM1
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_weight_ug=30.54105
|rna_concentration=1.13115
|sample_note=
|profile_hcage=CNhs12405,LSID914,release011,COMPLETED
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|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000057,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371,CL:0002620
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0001062,UBERON:0002097,UBERON:0002199,UBERON:0002384,UBERON:0002416,UBERON:0003102
|ancestors_in_disease_facet=DOID:0080000,DOID:11722,DOID:17,DOID:4,DOID:423,DOID:450,DOID:66,DOID:7
|sample_description=
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
|comment=
|created_by=
|creation_date=
|def=
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|has_quality=
|is_a=EFO:0002091;;FF:0000210;;FF:0000667
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.fractionation.hCAGE/Fibroblast%2520-%2520skin%2520dystrophia%2520myotonica%252c%2520donor1%2520%2528nuclear%2520fraction%2529.CNhs12405.14329-155E9.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.fractionation.hCAGE/Fibroblast%2520-%2520skin%2520dystrophia%2520myotonica%252c%2520donor1%2520%2528nuclear%2520fraction%2529.CNhs12405.14329-155E9.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.fractionation.hCAGE/Fibroblast%2520-%2520skin%2520dystrophia%2520myotonica%252c%2520donor1%2520%2528nuclear%2520fraction%2529.CNhs12405.14329-155E9.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.fractionation.hCAGE/Fibroblast%2520-%2520skin%2520dystrophia%2520myotonica%252c%2520donor1%2520%2528nuclear%2520fraction%2529.CNhs12405.14329-155E9.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.fractionation.hCAGE/Fibroblast%2520-%2520skin%2520dystrophia%2520myotonica%252c%2520donor1%2520%2528nuclear%2520fraction%2529.CNhs12405.14329-155E9.hg38.nobarcode.ctss.bed.gz
|id=FF:14329-155E9
|is_a=EFO:0002091;;FF:0000667
|is_obsolete=
|library_id=CNhs12405
|library_id_phase_based=2:CNhs12405
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;14329
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;14329
|name=Fibroblast - skin dystrophia myotonica, donor1 (nuclear fraction)
|namespace=FANTOM5
|namespace=FANTOM5
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|part_of=
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|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=155
|rna_catalog_number=custom
|rna_concentration=1.13115
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=
|rna_od260/230=2.06
|rna_od260/280=2.1
|rna_position=E9
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=1.55E+11
|rna_weight_ug=30.54105
|sample_age=2 year old child
|sample_category=fractionations and perturbations
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=GM04602
|sample_cell_type=fibroblast
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=Coriell
|sample_description=
|sample_dev_stage=
|sample_disease=DYSTROPHIA MYOTONICA 1; DM1
|sample_donor(cell lot)=
|sample_ethnicity=C
|sample_experimental_condition=nuclear RNA
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.12211532066963e-233!GO:0043226;organelle;9.77700147192248e-196!GO:0043229;intracellular organelle;3.00522325517717e-195!GO:0043231;intracellular membrane-bound organelle;1.37897818132846e-187!GO:0043227;membrane-bound organelle;2.27106610417378e-187!GO:0005737;cytoplasm;1.5933890075032e-151!GO:0044422;organelle part;3.36843405059187e-134!GO:0044446;intracellular organelle part;1.22198053691957e-132!GO:0044444;cytoplasmic part;8.26511195034335e-100!GO:0005634;nucleus;4.37918412544004e-95!GO:0043170;macromolecule metabolic process;5.4295470815152e-93!GO:0044238;primary metabolic process;3.57773671389439e-92!GO:0044237;cellular metabolic process;1.6494934987873e-87!GO:0005515;protein binding;1.25168527092142e-85!GO:0032991;macromolecular complex;6.62974445590722e-80!GO:0044428;nuclear part;1.76978300698078e-77!GO:0043233;organelle lumen;4.28170220920907e-66!GO:0031974;membrane-enclosed lumen;4.28170220920907e-66!GO:0003723;RNA binding;2.17870279612044e-61!GO:0043283;biopolymer metabolic process;3.27726500591206e-60!GO:0016043;cellular component organization and biogenesis;1.60732398592876e-58!GO:0030529;ribonucleoprotein complex;1.43363021249469e-56!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.1308571923255e-52!GO:0031981;nuclear lumen;1.90134919000827e-46!GO:0006396;RNA processing;2.20570101732814e-45!GO:0010467;gene expression;8.91463644426373e-45!GO:0019538;protein metabolic process;1.01505232496381e-44!GO:0043234;protein complex;1.35501008840977e-43!GO:0033036;macromolecule localization;2.28276276385497e-41!GO:0015031;protein transport;8.916709638927e-41!GO:0006996;organelle organization and biogenesis;3.12487074536313e-40!GO:0046907;intracellular transport;1.45667540916517e-38!GO:0031090;organelle membrane;2.3931174816527e-38!GO:0043228;non-membrane-bound organelle;2.84243644924721e-38!GO:0043232;intracellular non-membrane-bound organelle;2.84243644924721e-38!GO:0044260;cellular macromolecule metabolic process;3.59277054867751e-38!GO:0016071;mRNA metabolic process;9.54771117069825e-38!GO:0044267;cellular protein metabolic process;1.07368785867776e-37!GO:0008104;protein localization;1.27026357554411e-37!GO:0045184;establishment of protein localization;8.92382695426152e-37!GO:0006259;DNA metabolic process;1.38879203191971e-36!GO:0003676;nucleic acid binding;2.07994660637903e-33!GO:0000166;nucleotide binding;5.17330542809541e-33!GO:0008380;RNA splicing;6.31956534663093e-33!GO:0005739;mitochondrion;6.99699234098557e-33!GO:0007049;cell cycle;1.89582295673716e-32!GO:0006397;mRNA processing;1.96588373827605e-32!GO:0065003;macromolecular complex assembly;7.32882720935381e-31!GO:0006412;translation;1.50708785344975e-30!GO:0006886;intracellular protein transport;2.35444777512864e-30!GO:0005654;nucleoplasm;2.82640840087033e-29!GO:0022607;cellular component assembly;3.88639354722279e-29!GO:0005829;cytosol;1.6081094232837e-27!GO:0016070;RNA metabolic process;1.77363807040979e-27!GO:0031967;organelle envelope;1.97932077620315e-27!GO:0031975;envelope;3.06801551942329e-27!GO:0005840;ribosome;1.68675364233998e-26!GO:0022402;cell cycle process;5.62196575416688e-26!GO:0051649;establishment of cellular localization;3.50350962137859e-25!GO:0051641;cellular localization;3.55843214649403e-25!GO:0000278;mitotic cell cycle;1.37921011555355e-24!GO:0009059;macromolecule biosynthetic process;3.68465590671477e-24!GO:0009058;biosynthetic process;6.4906152929634e-24!GO:0044451;nucleoplasm part;1.02982264156865e-23!GO:0032553;ribonucleotide binding;1.16736779294338e-23!GO:0032555;purine ribonucleotide binding;1.16736779294338e-23!GO:0017076;purine nucleotide binding;1.23322133963922e-23!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.49742158546787e-23!GO:0016462;pyrophosphatase activity;1.79279725321387e-23!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.95382075596888e-23!GO:0005681;spliceosome;2.96923181661269e-23!GO:0005524;ATP binding;3.45297863719345e-23!GO:0017111;nucleoside-triphosphatase activity;4.36054001931823e-23!GO:0016817;hydrolase activity, acting on acid anhydrides;4.36054001931823e-23!GO:0032559;adenyl ribonucleotide binding;1.81620682553094e-22!GO:0003735;structural constituent of ribosome;1.94674203590538e-22!GO:0044429;mitochondrial part;2.75991288192085e-22!GO:0030554;adenyl nucleotide binding;3.73497766468433e-22!GO:0044249;cellular biosynthetic process;6.92743636534783e-22!GO:0033279;ribosomal subunit;4.04752733463426e-21!GO:0006974;response to DNA damage stimulus;8.09425405678563e-21!GO:0000087;M phase of mitotic cell cycle;5.13773649654278e-20!GO:0007067;mitosis;8.60765068769092e-20!GO:0048770;pigment granule;1.02183435360575e-19!GO:0042470;melanosome;1.02183435360575e-19!GO:0016874;ligase activity;1.02397258388664e-19!GO:0022403;cell cycle phase;1.26796876960797e-19!GO:0012505;endomembrane system;2.03916128456538e-19!GO:0005694;chromosome;3.26002554908001e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.37970072640542e-18!GO:0005783;endoplasmic reticulum;6.03293768599558e-18!GO:0051301;cell division;1.61520090155395e-17!GO:0051276;chromosome organization and biogenesis;2.58364322928975e-17!GO:0006281;DNA repair;2.72503028512838e-17!GO:0008134;transcription factor binding;5.05573347262778e-17!GO:0000279;M phase;7.63887106343761e-17!GO:0006457;protein folding;9.39930093137826e-17!GO:0044427;chromosomal part;5.5245975411943e-16!GO:0005730;nucleolus;8.12753392013169e-16!GO:0048193;Golgi vesicle transport;1.86217265031349e-15!GO:0005794;Golgi apparatus;2.03043038136452e-15!GO:0004386;helicase activity;2.2372596673953e-15!GO:0050794;regulation of cellular process;2.36228968080357e-15!GO:0006260;DNA replication;2.46951245624276e-15!GO:0044432;endoplasmic reticulum part;3.02180902309362e-15!GO:0005635;nuclear envelope;5.03330636586609e-15!GO:0006512;ubiquitin cycle;6.2818232650803e-15!GO:0031965;nuclear membrane;9.45718296778284e-15!GO:0009719;response to endogenous stimulus;1.19511482023365e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;1.39450776825518e-14!GO:0043285;biopolymer catabolic process;1.73521787001142e-14!GO:0044265;cellular macromolecule catabolic process;2.11806034789768e-14!GO:0006511;ubiquitin-dependent protein catabolic process;2.72304474617072e-14!GO:0016887;ATPase activity;2.86681901232736e-14!GO:0019941;modification-dependent protein catabolic process;2.94626839704263e-14!GO:0043632;modification-dependent macromolecule catabolic process;2.94626839704263e-14!GO:0044257;cellular protein catabolic process;3.63225324043508e-14!GO:0006605;protein targeting;3.63653571918051e-14!GO:0042623;ATPase activity, coupled;3.88966120579354e-14!GO:0044445;cytosolic part;4.92237077047309e-14!GO:0015630;microtubule cytoskeleton;6.63780705904229e-14!GO:0005740;mitochondrial envelope;6.66602791476689e-14!GO:0044453;nuclear membrane part;1.49069318640226e-13!GO:0019866;organelle inner membrane;1.88116361092321e-13!GO:0030163;protein catabolic process;2.03750169012544e-13!GO:0043412;biopolymer modification;2.13542773368378e-13!GO:0031966;mitochondrial membrane;2.57935072624852e-13!GO:0009057;macromolecule catabolic process;3.09766671700528e-13!GO:0022618;protein-RNA complex assembly;3.57532626494567e-13!GO:0006119;oxidative phosphorylation;3.9141403084852e-13!GO:0051726;regulation of cell cycle;4.70797652132723e-13!GO:0000074;regulation of progression through cell cycle;5.69064888561086e-13!GO:0008135;translation factor activity, nucleic acid binding;5.7417920172202e-13!GO:0000502;proteasome complex (sensu Eukaryota);6.36958148701291e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;9.00077774660756e-13!GO:0051082;unfolded protein binding;9.31287968358944e-13!GO:0005793;ER-Golgi intermediate compartment;1.27210799676589e-12!GO:0016192;vesicle-mediated transport;1.75894341838353e-12!GO:0006323;DNA packaging;3.10502110797861e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;3.2999763072867e-12!GO:0000375;RNA splicing, via transesterification reactions;3.2999763072867e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.2999763072867e-12!GO:0016604;nuclear body;4.57487899142017e-12!GO:0003712;transcription cofactor activity;4.58125907683817e-12!GO:0008026;ATP-dependent helicase activity;4.64236105923079e-12!GO:0006913;nucleocytoplasmic transport;8.30038989490494e-12!GO:0006464;protein modification process;1.08086696440299e-11!GO:0005743;mitochondrial inner membrane;1.14895624992681e-11!GO:0051169;nuclear transport;2.05967496118925e-11!GO:0015934;large ribosomal subunit;3.4237065536356e-11!GO:0006461;protein complex assembly;3.42973544905642e-11!GO:0006366;transcription from RNA polymerase II promoter;4.37528180897308e-11!GO:0043687;post-translational protein modification;4.43813613201115e-11!GO:0031980;mitochondrial lumen;5.98707643165588e-11!GO:0005759;mitochondrial matrix;5.98707643165588e-11!GO:0050789;regulation of biological process;6.30980469473776e-11!GO:0016607;nuclear speck;9.23548006448472e-11!GO:0005643;nuclear pore;1.23177881640571e-10!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.45186617938006e-10!GO:0015935;small ribosomal subunit;1.51822467383091e-10!GO:0048523;negative regulation of cellular process;1.76385923122529e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.88459668394202e-10!GO:0004812;aminoacyl-tRNA ligase activity;1.88459668394202e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.88459668394202e-10!GO:0042254;ribosome biogenesis and assembly;1.91352245476392e-10!GO:0005819;spindle;2.78196777476418e-10!GO:0006399;tRNA metabolic process;2.8461228207253e-10!GO:0044248;cellular catabolic process;3.38585298948331e-10!GO:0043038;amino acid activation;3.71164406998268e-10!GO:0006418;tRNA aminoacylation for protein translation;3.71164406998268e-10!GO:0043039;tRNA aminoacylation;3.71164406998268e-10!GO:0051186;cofactor metabolic process;5.2220543474283e-10!GO:0044455;mitochondrial membrane part;5.55227355117508e-10!GO:0003743;translation initiation factor activity;6.48165738464219e-10!GO:0005789;endoplasmic reticulum membrane;6.9346544062545e-10!GO:0006403;RNA localization;1.41667927035857e-09!GO:0019222;regulation of metabolic process;1.65089356252895e-09!GO:0007010;cytoskeleton organization and biogenesis;1.93537103026769e-09!GO:0050657;nucleic acid transport;2.1772854954172e-09!GO:0051236;establishment of RNA localization;2.1772854954172e-09!GO:0050658;RNA transport;2.1772854954172e-09!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.33952925626266e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.43860618795319e-09!GO:0008565;protein transporter activity;2.5227364850051e-09!GO:0008639;small protein conjugating enzyme activity;4.5138022534524e-09!GO:0004842;ubiquitin-protein ligase activity;5.20178805404101e-09!GO:0005813;centrosome;6.00614979419998e-09!GO:0046930;pore complex;6.17662394715888e-09!GO:0019787;small conjugating protein ligase activity;6.63342413430188e-09!GO:0016568;chromatin modification;7.44629742884945e-09!GO:0006446;regulation of translational initiation;8.08894697763478e-09!GO:0005815;microtubule organizing center;9.37765363700846e-09!GO:0048519;negative regulation of biological process;1.1050878913484e-08!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.11468207693094e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.12842624840353e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.39313792212451e-08!GO:0043566;structure-specific DNA binding;1.71612969187111e-08!GO:0005788;endoplasmic reticulum lumen;2.39228513217354e-08!GO:0012501;programmed cell death;3.1377731226646e-08!GO:0006413;translational initiation;3.57514483958021e-08!GO:0000785;chromatin;3.88151504931479e-08!GO:0005667;transcription factor complex;3.98363197797519e-08!GO:0005746;mitochondrial respiratory chain;4.18653529691876e-08!GO:0006915;apoptosis;5.1720584382293e-08!GO:0006732;coenzyme metabolic process;6.38777456479219e-08!GO:0006333;chromatin assembly or disassembly;6.41750625274165e-08!GO:0065004;protein-DNA complex assembly;6.44938818634887e-08!GO:0051028;mRNA transport;7.36266764608262e-08!GO:0009259;ribonucleotide metabolic process;7.79655906417446e-08!GO:0016881;acid-amino acid ligase activity;8.6133133910031e-08!GO:0017038;protein import;9.64069854492205e-08!GO:0065002;intracellular protein transport across a membrane;9.65195379752088e-08!GO:0007051;spindle organization and biogenesis;1.08374919128125e-07!GO:0031324;negative regulation of cellular metabolic process;1.16241435307999e-07!GO:0006261;DNA-dependent DNA replication;1.27015519222844e-07!GO:0008219;cell death;1.27743897391984e-07!GO:0016265;death;1.27743897391984e-07!GO:0030120;vesicle coat;1.38278593952694e-07!GO:0030662;coated vesicle membrane;1.38278593952694e-07!GO:0050136;NADH dehydrogenase (quinone) activity;1.41654821634527e-07!GO:0003954;NADH dehydrogenase activity;1.41654821634527e-07!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.41654821634527e-07!GO:0000775;chromosome, pericentric region;2.21752989910519e-07!GO:0016564;transcription repressor activity;2.71392177590403e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.71691602186017e-07!GO:0009060;aerobic respiration;2.73994527397263e-07!GO:0016787;hydrolase activity;3.21117082839413e-07!GO:0005768;endosome;3.42389892235932e-07!GO:0003697;single-stranded DNA binding;3.69952762626495e-07!GO:0048475;coated membrane;3.77204515850844e-07!GO:0030117;membrane coat;3.77204515850844e-07!GO:0006163;purine nucleotide metabolic process;4.21419780405767e-07!GO:0045333;cellular respiration;4.68446110590219e-07!GO:0003724;RNA helicase activity;5.16840236380239e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.42408752008423e-07!GO:0031323;regulation of cellular metabolic process;5.96476859485141e-07!GO:0009150;purine ribonucleotide metabolic process;6.26540909712447e-07!GO:0000075;cell cycle checkpoint;6.90407733316237e-07!GO:0009260;ribonucleotide biosynthetic process;7.63077100892325e-07!GO:0065007;biological regulation;7.74923270158117e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.05468922850246e-07!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.44776153181693e-07!GO:0009892;negative regulation of metabolic process;9.14981039833854e-07!GO:0019899;enzyme binding;9.43683642767613e-07!GO:0030036;actin cytoskeleton organization and biogenesis;1.03465809202745e-06!GO:0006606;protein import into nucleus;1.2138313618149e-06!GO:0008092;cytoskeletal protein binding;1.24115933186699e-06!GO:0003714;transcription corepressor activity;1.27586718493373e-06!GO:0006164;purine nucleotide biosynthetic process;1.35675292297062e-06!GO:0051170;nuclear import;1.36877758548242e-06!GO:0006099;tricarboxylic acid cycle;1.46047980857281e-06!GO:0046356;acetyl-CoA catabolic process;1.46047980857281e-06!GO:0042775;organelle ATP synthesis coupled electron transport;1.46047980857281e-06!GO:0042773;ATP synthesis coupled electron transport;1.46047980857281e-06!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.56823303586352e-06!GO:0006350;transcription;1.77768002724674e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.92238829372404e-06!GO:0044431;Golgi apparatus part;1.97185632970121e-06!GO:0030964;NADH dehydrogenase complex (quinone);2.005149383452e-06!GO:0045271;respiratory chain complex I;2.005149383452e-06!GO:0005747;mitochondrial respiratory chain complex I;2.005149383452e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.15154642886496e-06!GO:0051329;interphase of mitotic cell cycle;2.22225287033954e-06!GO:0043623;cellular protein complex assembly;2.45443159528421e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.45443159528421e-06!GO:0009109;coenzyme catabolic process;2.75842357937238e-06!GO:0045786;negative regulation of progression through cell cycle;2.97552900976015e-06!GO:0051325;interphase;3.01097008956463e-06!GO:0051187;cofactor catabolic process;3.01097008956463e-06!GO:0008094;DNA-dependent ATPase activity;3.34533600429134e-06!GO:0006364;rRNA processing;3.6850029687562e-06!GO:0009199;ribonucleoside triphosphate metabolic process;3.79161554109829e-06!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.80353594320273e-06!GO:0006793;phosphorus metabolic process;3.97854138882287e-06!GO:0006796;phosphate metabolic process;3.97854138882287e-06!GO:0005874;microtubule;3.98590223714414e-06!GO:0009056;catabolic process;4.04177216832221e-06!GO:0006084;acetyl-CoA metabolic process;4.06980039745669e-06!GO:0015986;ATP synthesis coupled proton transport;4.20603437347559e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.20603437347559e-06!GO:0003924;GTPase activity;4.38399930994247e-06!GO:0016363;nuclear matrix;4.59178959200429e-06!GO:0005798;Golgi-associated vesicle;5.43783795090094e-06!GO:0000151;ubiquitin ligase complex;5.46929828557818e-06!GO:0031252;leading edge;5.51224743134188e-06!GO:0009141;nucleoside triphosphate metabolic process;5.73076920199586e-06!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.47769131044834e-06!GO:0016563;transcription activator activity;8.13783355209048e-06!GO:0016072;rRNA metabolic process;8.23066979755417e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.41748378753248e-06!GO:0009144;purine nucleoside triphosphate metabolic process;8.41748378753248e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;8.7410056193747e-06!GO:0046034;ATP metabolic process;8.7410056193747e-06!GO:0003713;transcription coactivator activity;9.29101921938741e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;9.43807492586502e-06!GO:0003690;double-stranded DNA binding;9.43807492586502e-06!GO:0031988;membrane-bound vesicle;9.79880608815219e-06!GO:0005761;mitochondrial ribosome;9.86303354230956e-06!GO:0000313;organellar ribosome;9.86303354230956e-06!GO:0009055;electron carrier activity;1.02612932344241e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.04530252171745e-05!GO:0030532;small nuclear ribonucleoprotein complex;1.06090045696621e-05!GO:0030029;actin filament-based process;1.09508982081471e-05!GO:0016481;negative regulation of transcription;1.12084015326901e-05!GO:0016023;cytoplasmic membrane-bound vesicle;1.12859481731306e-05!GO:0016310;phosphorylation;1.12859481731306e-05!GO:0016740;transferase activity;1.16204257446614e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.19820888676327e-05!GO:0051246;regulation of protein metabolic process;1.22020660233156e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.30982033618201e-05!GO:0044440;endosomal part;1.52358270646612e-05!GO:0010008;endosome membrane;1.52358270646612e-05!GO:0032446;protein modification by small protein conjugation;1.56006036693715e-05!GO:0051789;response to protein stimulus;1.65168206740575e-05!GO:0006986;response to unfolded protein;1.65168206740575e-05!GO:0010468;regulation of gene expression;1.65919904548058e-05!GO:0006334;nucleosome assembly;1.8096157013733e-05!GO:0009142;nucleoside triphosphate biosynthetic process;2.07528878543596e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.07528878543596e-05!GO:0006613;cotranslational protein targeting to membrane;2.08519815773308e-05!GO:0019829;cation-transporting ATPase activity;2.15137943341139e-05!GO:0008361;regulation of cell size;2.41154992802544e-05!GO:0000245;spliceosome assembly;2.42135543343425e-05!GO:0031497;chromatin assembly;2.4991272834386e-05!GO:0016567;protein ubiquitination;2.4991272834386e-05!GO:0031982;vesicle;2.53676011442297e-05!GO:0006310;DNA recombination;2.57331905383669e-05!GO:0016049;cell growth;2.7304210454475e-05!GO:0005773;vacuole;3.25668432180941e-05!GO:0043067;regulation of programmed cell death;3.4096438569593e-05!GO:0051188;cofactor biosynthetic process;3.4096438569593e-05!GO:0031410;cytoplasmic vesicle;3.4096438569593e-05!GO:0042981;regulation of apoptosis;3.80853939787713e-05!GO:0006754;ATP biosynthetic process;4.38891217701603e-05!GO:0006753;nucleoside phosphate metabolic process;4.38891217701603e-05!GO:0030867;rough endoplasmic reticulum membrane;4.4053968470173e-05!GO:0016469;proton-transporting two-sector ATPase complex;4.54191842974119e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;4.58006107281227e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;4.58006107281227e-05!GO:0000776;kinetochore;4.91346954738736e-05!GO:0003682;chromatin binding;4.98035844489011e-05!GO:0008186;RNA-dependent ATPase activity;5.10813418666699e-05!GO:0007059;chromosome segregation;5.61775364439484e-05!GO:0032774;RNA biosynthetic process;5.76205836692257e-05!GO:0007052;mitotic spindle organization and biogenesis;5.79882301304789e-05!GO:0009117;nucleotide metabolic process;6.80908888106679e-05!GO:0006351;transcription, DNA-dependent;7.3864440073672e-05!GO:0000139;Golgi membrane;7.54416402453555e-05!GO:0006752;group transfer coenzyme metabolic process;8.14602158948978e-05!GO:0006302;double-strand break repair;8.3346319919107e-05!GO:0003678;DNA helicase activity;8.47332545301455e-05!GO:0005657;replication fork;8.72792099366308e-05!GO:0051427;hormone receptor binding;8.79135319659646e-05!GO:0005839;proteasome core complex (sensu Eukaryota);9.52277218214462e-05!GO:0051052;regulation of DNA metabolic process;9.95338320751074e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000104329367662273!GO:0005856;cytoskeleton;0.00010596036771604!GO:0051168;nuclear export;0.000106280474059877!GO:0006916;anti-apoptosis;0.000110527020126785!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000120552276701111!GO:0043069;negative regulation of programmed cell death;0.00012668729375674!GO:0003677;DNA binding;0.00012748658993766!GO:0016853;isomerase activity;0.000127496169812119!GO:0003684;damaged DNA binding;0.000141903157999106!GO:0007093;mitotic cell cycle checkpoint;0.000143746332376078!GO:0030133;transport vesicle;0.000153121198961116!GO:0016779;nucleotidyltransferase activity;0.000160914942278592!GO:0004004;ATP-dependent RNA helicase activity;0.000161458607354376!GO:0004674;protein serine/threonine kinase activity;0.000170858604943201!GO:0035257;nuclear hormone receptor binding;0.000170894238714071!GO:0015980;energy derivation by oxidation of organic compounds;0.000170894238714071!GO:0000323;lytic vacuole;0.000171470099039972!GO:0005764;lysosome;0.000171470099039972!GO:0007088;regulation of mitosis;0.000173131771834255!GO:0016859;cis-trans isomerase activity;0.000190223733807169!GO:0033116;ER-Golgi intermediate compartment membrane;0.00019406711272436!GO:0001558;regulation of cell growth;0.000202155171438217!GO:0043066;negative regulation of apoptosis;0.000210124214971012!GO:0045259;proton-transporting ATP synthase complex;0.000211885157501008!GO:0007017;microtubule-based process;0.000222634872967551!GO:0045449;regulation of transcription;0.00022329624540202!GO:0000059;protein import into nucleus, docking;0.000235958432272096!GO:0015078;hydrogen ion transmembrane transporter activity;0.00024486461245455!GO:0008047;enzyme activator activity;0.00024603622567003!GO:0005769;early endosome;0.000246817378278162!GO:0006612;protein targeting to membrane;0.000251806133275883!GO:0005770;late endosome;0.000253232171839224!GO:0005905;coated pit;0.000271206516998526!GO:0000922;spindle pole;0.000305685853610357!GO:0048522;positive regulation of cellular process;0.000307492375263708!GO:0004298;threonine endopeptidase activity;0.00031361474544675!GO:0003729;mRNA binding;0.000314760494275729!GO:0004576;oligosaccharyl transferase activity;0.000343031383161453!GO:0009108;coenzyme biosynthetic process;0.000349940097301857!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000386490171809194!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000440162369019148!GO:0030134;ER to Golgi transport vesicle;0.000447052710236089!GO:0008654;phospholipid biosynthetic process;0.000463522499159848!GO:0005791;rough endoplasmic reticulum;0.000464234612572881!GO:0008250;oligosaccharyl transferase complex;0.000464234612572881!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000480659688931618!GO:0016197;endosome transport;0.000542587765411802!GO:0005048;signal sequence binding;0.00059438736732463!GO:0015631;tubulin binding;0.000649754862597777!GO:0048471;perinuclear region of cytoplasm;0.000666281786432369!GO:0030663;COPI coated vesicle membrane;0.000668576679510594!GO:0030126;COPI vesicle coat;0.000668576679510594!GO:0051252;regulation of RNA metabolic process;0.000690462916698537!GO:0006891;intra-Golgi vesicle-mediated transport;0.000698847285776584!GO:0007050;cell cycle arrest;0.000752674529848816!GO:0008022;protein C-terminus binding;0.000760641175853408!GO:0006414;translational elongation;0.000841122709356552!GO:0030127;COPII vesicle coat;0.000841122709356552!GO:0012507;ER to Golgi transport vesicle membrane;0.000841122709356552!GO:0005885;Arp2/3 protein complex;0.000876178523169695!GO:0007243;protein kinase cascade;0.000952391473410027!GO:0005876;spindle microtubule;0.00105631792194722!GO:0005096;GTPase activator activity;0.00111143635181866!GO:0006355;regulation of transcription, DNA-dependent;0.00115502177243446!GO:0044262;cellular carbohydrate metabolic process;0.00148633747471997!GO:0043284;biopolymer biosynthetic process;0.00151817963800561!GO:0005525;GTP binding;0.00151823867805079!GO:0000910;cytokinesis;0.00152186736238708!GO:0030521;androgen receptor signaling pathway;0.00153303442084039!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00154225967071194!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00158041293214354!GO:0043021;ribonucleoprotein binding;0.00160021818421214!GO:0008270;zinc ion binding;0.00167426775137485!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0017507243853159!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00176414801531395!GO:0006402;mRNA catabolic process;0.00176535325007118!GO:0045941;positive regulation of transcription;0.00181469876502435!GO:0045893;positive regulation of transcription, DNA-dependent;0.00181651896775314!GO:0031124;mRNA 3'-end processing;0.00186862769568945!GO:0030137;COPI-coated vesicle;0.00187614043528718!GO:0031968;organelle outer membrane;0.00197174121777388!GO:0000082;G1/S transition of mitotic cell cycle;0.00200159245119528!GO:0003779;actin binding;0.00207755243446!GO:0019867;outer membrane;0.00229778987229762!GO:0004003;ATP-dependent DNA helicase activity;0.00229778987229762!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00229862937224519!GO:0001726;ruffle;0.00245386643039758!GO:0006289;nucleotide-excision repair;0.00245759106482633!GO:0007005;mitochondrion organization and biogenesis;0.00250603404996331!GO:0030658;transport vesicle membrane;0.00253770021495695!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00276081352640079!GO:0018196;peptidyl-asparagine modification;0.0027697211818137!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0027697211818137!GO:0045454;cell redox homeostasis;0.00293443273780073!GO:0006892;post-Golgi vesicle-mediated transport;0.0030057331511593!GO:0032508;DNA duplex unwinding;0.0031296289848397!GO:0032392;DNA geometric change;0.0031296289848397!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00319103482426334!GO:0004527;exonuclease activity;0.00319843950184474!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00320397054570844!GO:0051920;peroxiredoxin activity;0.00322399188662457!GO:0004177;aminopeptidase activity;0.00339952939701815!GO:0006275;regulation of DNA replication;0.00341725669479239!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00353724673607362!GO:0065009;regulation of a molecular function;0.00361703606385777!GO:0045892;negative regulation of transcription, DNA-dependent;0.00380172500165143!GO:0045045;secretory pathway;0.00404218385831033!GO:0042802;identical protein binding;0.004052202330734!GO:0046914;transition metal ion binding;0.00415424913274822!GO:0035258;steroid hormone receptor binding;0.00422353206693429!GO:0017166;vinculin binding;0.00444563986932178!GO:0005637;nuclear inner membrane;0.00444563986932178!GO:0032200;telomere organization and biogenesis;0.00475829851534067!GO:0000723;telomere maintenance;0.00475829851534067!GO:0032561;guanyl ribonucleotide binding;0.00479839081466506!GO:0019001;guanyl nucleotide binding;0.00479839081466506!GO:0000819;sister chromatid segregation;0.00490643291579803!GO:0000070;mitotic sister chromatid segregation;0.00505899128264614!GO:0044452;nucleolar part;0.00513608304591031!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00537951347427648!GO:0048500;signal recognition particle;0.00557921728632909!GO:0008139;nuclear localization sequence binding;0.00560829095532241!GO:0046489;phosphoinositide biosynthetic process;0.00585701899408432!GO:0006268;DNA unwinding during replication;0.005858550077015!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00603703749930574!GO:0015399;primary active transmembrane transporter activity;0.00603703749930574!GO:0006352;transcription initiation;0.00605512206585834!GO:0019798;procollagen-proline dioxygenase activity;0.00646886165938987!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00672448516007311!GO:0003711;transcription elongation regulator activity;0.00673504301711223!GO:0030518;steroid hormone receptor signaling pathway;0.00702878969745786!GO:0031543;peptidyl-proline dioxygenase activity;0.00704337825690715!GO:0030027;lamellipodium;0.00728904175698507!GO:0031123;RNA 3'-end processing;0.00752024272195769!GO:0030660;Golgi-associated vesicle membrane;0.00763857741853862!GO:0006401;RNA catabolic process;0.00786325631085734!GO:0005581;collagen;0.00791741825587509!GO:0030132;clathrin coat of coated pit;0.008823078031769!GO:0000228;nuclear chromosome;0.00888396409362187!GO:0030118;clathrin coat;0.0088976968019689!GO:0009165;nucleotide biosynthetic process;0.00890988835099321!GO:0031625;ubiquitin protein ligase binding;0.00895313888232241!GO:0051128;regulation of cellular component organization and biogenesis;0.00928581679897247!GO:0000049;tRNA binding;0.00944902548582851!GO:0016126;sterol biosynthetic process;0.00952828096046912!GO:0050681;androgen receptor binding;0.00961417690686385!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00982797245585356!GO:0006383;transcription from RNA polymerase III promoter;0.00983908660627181!GO:0000792;heterochromatin;0.0106121707392375!GO:0000781;chromosome, telomeric region;0.0106121707392375!GO:0003746;translation elongation factor activity;0.0106121707392375!GO:0003756;protein disulfide isomerase activity;0.0106133912745264!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0106133912745264!GO:0016491;oxidoreductase activity;0.0107360865118627!GO:0016301;kinase activity;0.0112128660239374!GO:0040008;regulation of growth;0.0112215551486225!GO:0044420;extracellular matrix part;0.0112343112111523!GO:0031072;heat shock protein binding;0.0113626678680107!GO:0006338;chromatin remodeling;0.0113836100443163!GO:0050662;coenzyme binding;0.0115797900160014!GO:0046474;glycerophospholipid biosynthetic process;0.0117114157286798!GO:0006378;mRNA polyadenylation;0.0117491863707005!GO:0006950;response to stress;0.0118139247689833!GO:0005684;U2-dependent spliceosome;0.0118887498794563!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.012141950507706!GO:0045047;protein targeting to ER;0.012141950507706!GO:0008033;tRNA processing;0.0123815462465689!GO:0005741;mitochondrial outer membrane;0.0126248780967404!GO:0005862;muscle thin filament tropomyosin;0.0126248780967404!GO:0006405;RNA export from nucleus;0.0126906138159841!GO:0003899;DNA-directed RNA polymerase activity;0.0129537395870565!GO:0005832;chaperonin-containing T-complex;0.0130353836929978!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0132053461080009!GO:0048518;positive regulation of biological process;0.0135097773062045!GO:0016251;general RNA polymerase II transcription factor activity;0.0135307954761945!GO:0008312;7S RNA binding;0.0139442320179723!GO:0019843;rRNA binding;0.0140967314019785!GO:0030032;lamellipodium biogenesis;0.0143055375263629!GO:0007030;Golgi organization and biogenesis;0.0143796469361818!GO:0031570;DNA integrity checkpoint;0.0146242551518424!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0148696933084239!GO:0046483;heterocycle metabolic process;0.014890528953512!GO:0005583;fibrillar collagen;0.0151554256158404!GO:0048468;cell development;0.0154600472905512!GO:0016741;transferase activity, transferring one-carbon groups;0.0157235658383317!GO:0008168;methyltransferase activity;0.0157383184227075!GO:0001527;microfibril;0.0158350598335371!GO:0043488;regulation of mRNA stability;0.0161072800197679!GO:0043487;regulation of RNA stability;0.0161072800197679!GO:0051539;4 iron, 4 sulfur cluster binding;0.0162703771802951!GO:0003702;RNA polymerase II transcription factor activity;0.0164648763750492!GO:0009967;positive regulation of signal transduction;0.0164924917148632!GO:0022408;negative regulation of cell-cell adhesion;0.0166177594901451!GO:0051271;negative regulation of cell motility;0.016690389499784!GO:0030695;GTPase regulator activity;0.0169611453170487!GO:0031901;early endosome membrane;0.0170621471086279!GO:0006509;membrane protein ectodomain proteolysis;0.0172669087484381!GO:0033619;membrane protein proteolysis;0.0172669087484381!GO:0006607;NLS-bearing substrate import into nucleus;0.0175252207019637!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0176308231512789!GO:0006376;mRNA splice site selection;0.0177425229871097!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0177425229871097!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.0182616098018016!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0184304571752891!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0184304571752891!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0184304571752891!GO:0005083;small GTPase regulator activity;0.0188221518317546!GO:0045792;negative regulation of cell size;0.0188649619226742!GO:0000118;histone deacetylase complex;0.0189631225364067!GO:0006497;protein amino acid lipidation;0.0192651317184144!GO:0007346;regulation of progression through mitotic cell cycle;0.0193351860387297!GO:0007041;lysosomal transport;0.0196380089638192!GO:0007034;vacuolar transport;0.0196392669580794!GO:0006270;DNA replication initiation;0.0196392669580794!GO:0007265;Ras protein signal transduction;0.0196392669580794!GO:0031529;ruffle organization and biogenesis;0.0199616167026428!GO:0040029;regulation of gene expression, epigenetic;0.0199955286708382!GO:0030308;negative regulation of cell growth;0.0206043801552629!GO:0000339;RNA cap binding;0.0206043801552629!GO:0000786;nucleosome;0.020643303815838!GO:0005938;cell cortex;0.0209817275872809!GO:0006007;glucose catabolic process;0.0210265956029327!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0213431544799523!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0213431544799523!GO:0001952;regulation of cell-matrix adhesion;0.0213431544799523!GO:0030176;integral to endoplasmic reticulum membrane;0.0213431544799523!GO:0006611;protein export from nucleus;0.0218338841421111!GO:0031418;L-ascorbic acid binding;0.0221037421085186!GO:0005869;dynactin complex;0.0221243624018483!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0222322811320431!GO:0000018;regulation of DNA recombination;0.022286700253767!GO:0006984;ER-nuclear signaling pathway;0.0222978475490692!GO:0048487;beta-tubulin binding;0.0226499279546477!GO:0043492;ATPase activity, coupled to movement of substances;0.0239711481618778!GO:0042770;DNA damage response, signal transduction;0.0243159996141189!GO:0008017;microtubule binding;0.0246904389295478!GO:0005762;mitochondrial large ribosomal subunit;0.0248814553665729!GO:0000315;organellar large ribosomal subunit;0.0248814553665729!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0250020087738601!GO:0006379;mRNA cleavage;0.0251872763321871!GO:0007004;telomere maintenance via telomerase;0.0252792850226075!GO:0007160;cell-matrix adhesion;0.0258587061909114!GO:0000209;protein polyubiquitination;0.0259119149543458!GO:0051287;NAD binding;0.0261756225167824!GO:0005875;microtubule associated complex;0.0266272561001989!GO:0007264;small GTPase mediated signal transduction;0.0279441757971616!GO:0009112;nucleobase metabolic process;0.0279441757971616!GO:0003923;GPI-anchor transamidase activity;0.0279441757971616!GO:0016255;attachment of GPI anchor to protein;0.0279441757971616!GO:0042765;GPI-anchor transamidase complex;0.0279441757971616!GO:0006284;base-excision repair;0.0279441757971616!GO:0035267;NuA4 histone acetyltransferase complex;0.0279682459995045!GO:0050790;regulation of catalytic activity;0.0280229791903109!GO:0008154;actin polymerization and/or depolymerization;0.0280229791903109!GO:0030522;intracellular receptor-mediated signaling pathway;0.028974294088411!GO:0000287;magnesium ion binding;0.0290492784294916!GO:0000152;nuclear ubiquitin ligase complex;0.0290492784294916!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0290538207974001!GO:0016584;nucleosome positioning;0.0292126349654288!GO:0016408;C-acyltransferase activity;0.0293778538880229!GO:0043495;protein anchor;0.0294807462362073!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0294807462362073!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.029678273706502!GO:0033043;regulation of organelle organization and biogenesis;0.029678273706502!GO:0031589;cell-substrate adhesion;0.029678273706502!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0305431948207023!GO:0008180;signalosome;0.0317373974854967!GO:0000725;recombinational repair;0.031851046531326!GO:0000724;double-strand break repair via homologous recombination;0.031851046531326!GO:0006541;glutamine metabolic process;0.0321822192796132!GO:0033559;unsaturated fatty acid metabolic process;0.032796847391727!GO:0006636;unsaturated fatty acid biosynthetic process;0.032796847391727!GO:0000123;histone acetyltransferase complex;0.0329799189961539!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0329799189961539!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0333035275328848!GO:0051053;negative regulation of DNA metabolic process;0.0334390831113116!GO:0001953;negative regulation of cell-matrix adhesion;0.033465991201245!GO:0005784;translocon complex;0.0337880127732317!GO:0051087;chaperone binding;0.0337880127732317!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0341521042271177!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0341521042271177!GO:0031577;spindle checkpoint;0.0346000501547653!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0346137472468448!GO:0000077;DNA damage checkpoint;0.0349655361180073!GO:0005595;collagen type XII;0.0349655361180073!GO:0001666;response to hypoxia;0.0353387385532364!GO:0030384;phosphoinositide metabolic process;0.036377142014835!GO:0005680;anaphase-promoting complex;0.036377142014835!GO:0006520;amino acid metabolic process;0.0368669477034099!GO:0043624;cellular protein complex disassembly;0.0370299984839786!GO:0035035;histone acetyltransferase binding;0.0374652239546427!GO:0006354;RNA elongation;0.0384669168635591!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0385939590709156!GO:0005099;Ras GTPase activator activity;0.0385939590709156!GO:0031461;cullin-RING ubiquitin ligase complex;0.0387842741850972!GO:0004518;nuclease activity;0.038921916341608!GO:0008234;cysteine-type peptidase activity;0.0389291009102622!GO:0006650;glycerophospholipid metabolic process;0.0389745141131602!GO:0032906;transforming growth factor-beta2 production;0.0392296616270209!GO:0032909;regulation of transforming growth factor-beta2 production;0.0392296616270209!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0393798305897096!GO:0043022;ribosome binding;0.0394930743998538!GO:0051348;negative regulation of transferase activity;0.0396659396857325!GO:0016044;membrane organization and biogenesis;0.0399292608120474!GO:0032940;secretion by cell;0.0399292608120474!GO:0040013;negative regulation of locomotion;0.0399292608120474!GO:0033673;negative regulation of kinase activity;0.0399699549804544!GO:0006469;negative regulation of protein kinase activity;0.0399699549804544!GO:0005774;vacuolar membrane;0.0402645899260118!GO:0006695;cholesterol biosynthetic process;0.0410942706720252!GO:0007040;lysosome organization and biogenesis;0.0412864091889944!GO:0006595;polyamine metabolic process;0.0413602870988547!GO:0006091;generation of precursor metabolites and energy;0.0413815799602898!GO:0030119;AP-type membrane coat adaptor complex;0.0416217200300538!GO:0032984;macromolecular complex disassembly;0.0422468027485969!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0432155768614547!GO:0044430;cytoskeletal part;0.0433661460606863!GO:0019752;carboxylic acid metabolic process;0.0441913318147436!GO:0006144;purine base metabolic process;0.045078845066212!GO:0007162;negative regulation of cell adhesion;0.0451220329127767!GO:0043189;H4/H2A histone acetyltransferase complex;0.0462170984032592!GO:0015992;proton transport;0.0463114935681932!GO:0042393;histone binding;0.0463201989820591!GO:0005591;collagen type VIII;0.0465479304023533!GO:0005598;short-chain collagen;0.0465479304023533!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0466055123654576!GO:0008143;poly(A) binding;0.0466055123654576!GO:0007033;vacuole organization and biogenesis;0.0474660711774433!GO:0046519;sphingoid metabolic process;0.0479579780063634!GO:0006818;hydrogen transport;0.04873121637614!GO:0043631;RNA polyadenylation;0.0493238572550216!GO:0007406;negative regulation of neuroblast proliferation;0.0494713306201812!GO:0042158;lipoprotein biosynthetic process;0.0497993809496316
|sample_id=14329
|sample_note=
|sample_sex=F
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=skin
|top_motifs=HBP1_HMGB_SSRP1_UBTF:2.39149711959;ALX4:2.33986274228;NKX3-1:2.30459249668;EN1,2:1.91035954348;NR3C1:1.87059293171;GATA4:1.84907694278;GCM1,2:1.81454504039;FOXL1:1.77079457302;KLF4:1.62479206464;PRDM1:1.62116990548;XBP1:1.61863381965;GZF1:1.61854698138;ZNF384:1.58913742677;NKX3-2:1.56397365074;TEAD1:1.53947780338;ESR1:1.52160275189;UFEwm:1.51941322078;MYBL2:1.49065589639;TOPORS:1.45601311474;HIF1A:1.40966608792;EVI1:1.38390464174;RXRA_VDR{dimer}:1.36486320638;HOX{A5,B5}:1.34460099668;SRF:1.32068340673;TFDP1:1.2801596651;HSF1,2:1.25643091818;HMGA1,2:1.25339974435;MZF1:1.24285012862;NKX2-2,8:1.17595498995;POU3F1..4:1.15361043002;PAX8:1.15018572566;TEF:1.10916416312;GFI1:1.09243675482;E2F1..5:1.06055896476;HMX1:1.04023282764;AHR_ARNT_ARNT2:1.03624213812;AIRE:1.03500395501;PDX1:1.03351345289;ZBTB16:1.00256291391;GFI1B:0.997541013288;EP300:0.994870902755;MYB:0.991114887994;IKZF1:0.990276881853;SOX17:0.98439270056;ZIC1..3:0.953933647898;NFE2L1:0.945856717185;ZNF238:0.945482480218;SPZ1:0.904659128375;HOX{A4,D4}:0.895335866886;GTF2I:0.885451946872;MAZ:0.846371768798;POU1F1:0.826568744257;GTF2A1,2:0.818651857568;TP53:0.810954728738;BPTF:0.807484037654;RXR{A,B,G}:0.792847201973;EBF1:0.783321526184;NKX2-1,4:0.755152458163;FOXD3:0.746232306871;PAX3,7:0.734252028401;MTE{core}:0.713682301003;TAL1_TCF{3,4,12}:0.659328874841;TLX1..3_NFIC{dimer}:0.657080475443;NFIX:0.621882320676;NFATC1..3:0.609072978422;RREB1:0.588406130016;ATF6:0.569859410177;NFY{A,B,C}:0.5616758188;TFAP4:0.559786635295;NANOG{mouse}:0.559443331997;GLI1..3:0.547958511126;XCPE1{core}:0.525544130178;NR1H4:0.514193874933;STAT1,3:0.507599056523;FOXP1:0.443585605882;SMAD1..7,9:0.412515670837;ARID5B:0.384929238709;ZBTB6:0.360974870122;HLF:0.357921315681;ELK1,4_GABP{A,B1}:0.354352339585;NFE2L2:0.343996671919;MED-1{core}:0.334347623807;BACH2:0.334160727717;MAFB:0.323713356177;ZNF143:0.317509646747;TFAP2{A,C}:0.315833572384;FOS_FOS{B,L1}_JUN{B,D}:0.313338219654;DMAP1_NCOR{1,2}_SMARC:0.312294486008;SP1:0.297726927936;NRF1:0.292440930741;MEF2{A,B,C,D}:0.243851842784;PAX4:0.235399128072;PITX1..3:0.233457363348;HES1:0.21307807452;YY1:0.20367571198;FOXA2:0.195232439535;CREB1:0.17098417016;ATF5_CREB3:0.157739636737;FOXN1:0.145581708705;RFX1:0.139115653516;HOX{A6,A7,B6,B7}:0.104839594993;POU5F1:0.100669580659;NFE2:0.100113733391;ZFP161:0.0970015130797;PAX5:0.0882728776008;RUNX1..3:0.0838415312195;FOSL2:0.0788509716831;TFAP2B:0.0752178903869;FOXO1,3,4:0.0402369232751;PRRX1,2:0.0322294249491;FOX{I1,J2}:0.0238900201572;HIC1:0.0195215680722;SOX2:0.0187605962145;LEF1_TCF7_TCF7L1,2:-0.00333809240355;PATZ1:-0.0152668162593;CEBPA,B_DDIT3:-0.027175443112;ELF1,2,4:-0.0386685549643;PAX1,9:-0.0762337117242;TFCP2:-0.0901250533945;IRF1,2:-0.0929116046065;DBP:-0.0946240176648;T:-0.119443225863;PAX2:-0.124866236037;EGR1..3:-0.135539914164;TBP:-0.136573639699;NKX2-3_NKX2-5:-0.151676829176;TBX4,5:-0.174104752079;CDC5L:-0.178838424451;POU2F1..3:-0.184249565217;MYFfamily:-0.185843785966;HOXA9_MEIS1:-0.198082257359;ATF4:-0.213072408723;HAND1,2:-0.218507423045;ZNF148:-0.219789356112;CDX1,2,4:-0.226517570874;STAT2,4,6:-0.237103654292;SOX5:-0.243469662436;STAT5{A,B}:-0.292492633232;AR:-0.29530606863;HNF1A:-0.30004299702;SPI1:-0.329412310641;ONECUT1,2:-0.337534789598;SOX{8,9,10}:-0.35332691965;NHLH1,2:-0.357005332228;FOX{D1,D2}:-0.371290379467;ETS1,2:-0.389239066011;NKX6-1,2:-0.404070429305;FOXP3:-0.405203765078;HNF4A_NR2F1,2:-0.414882758141;PPARG:-0.418477092058;SPIB:-0.455109363978;LHX3,4:-0.459275769451;POU6F1:-0.482212869513;TLX2:-0.497079996503;JUN:-0.512196968952;RBPJ:-0.516916429333;CUX2:-0.546537313;NFKB1_REL_RELA:-0.557827614444;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.570936498689;ADNP_IRX_SIX_ZHX:-0.578381937808;bHLH_family:-0.604215546893;ATF2:-0.634120452551;TGIF1:-0.648994527902;OCT4_SOX2{dimer}:-0.673831269487;MTF1:-0.711987799007;REST:-0.725752986925;VSX1,2:-0.751017645405;SREBF1,2:-0.760617025293;CRX:-0.793242342507;ZNF423:-0.798826166768;BREu{core}:-0.827081735399;IKZF2:-0.843017893237;NFIL3:-0.843437240048;ALX1:-0.845685711136;RFX2..5_RFXANK_RFXAP:-0.856846539137;IRF7:-0.866929912865;PAX6:-0.899640890785;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.914317311819;NR6A1:-0.975380596691;SNAI1..3:-1.02969901601;GATA6:-1.12334020364;FOXM1:-1.18128674981;PBX1:-1.25047533988;NR5A1,2:-1.28504878966;ZEB1:-1.30150643828;NANOG:-1.30951183542;FOX{F1,F2,J1}:-1.38286445567;ESRRA:-1.3882034132;FOXQ1:-1.45348822171;RORA:-1.47641758465;LMO2:-1.48474509942;MYOD1:-1.54149618756
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:14329-155E9;search_select_hide=table117:FF:14329-155E9
}}
}}

Latest revision as of 19:06, 4 June 2020

Name:Fibroblast - skin dystrophia myotonica, donor1 (nuclear fraction)
Species:Human (Homo sapiens)
Library ID:CNhs12405
Sample type:fractionations and perturbations
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueskin
dev stageNA
sexF
age2 year old child
cell typefibroblast
cell lineNA
companyCoriell
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numbercustom
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005754
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12405 CAGE DRX008035 DRR008907
Accession ID Hg19

Library idBAMCTSS
CNhs12405 DRZ000332 DRZ001717
Accession ID Hg38

Library idBAMCTSS
CNhs12405 DRZ011682 DRZ013067
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0547
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.555
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0248
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair1.029
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0355
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.00185
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.164
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.714
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.511
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.157
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.118
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.523
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.187
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0462
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD46.659795e-4
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0717
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.499
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0332
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.109
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.187
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.0717
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.404
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.351
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.545
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.187
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.983
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.499
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.725
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.913
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12405

Jaspar motifP-value
MA0002.20.0484
MA0003.10.0103
MA0004.10.0585
MA0006.10.572
MA0007.10.243
MA0009.10.478
MA0014.10.365
MA0017.10.00305
MA0018.20.32
MA0019.10.775
MA0024.10.0239
MA0025.10.04
MA0027.10.633
MA0028.10.996
MA0029.10.756
MA0030.10.0443
MA0031.10.0182
MA0035.21.06818e-4
MA0038.10.508
MA0039.20.259
MA0040.10.966
MA0041.10.144
MA0042.10.319
MA0043.10.00726
MA0046.10.159
MA0047.20.294
MA0048.11.06613e-4
MA0050.10.0311
MA0051.10.0146
MA0052.10.261
MA0055.10.0653
MA0057.10.89
MA0058.10.011
MA0059.10.0924
MA0060.10.382
MA0061.16.20803e-4
MA0062.20.266
MA0065.22.24354e-4
MA0066.10.422
MA0067.10.641
MA0068.10.219
MA0069.10.0261
MA0070.10.344
MA0071.10.0631
MA0072.10.33
MA0073.10.787
MA0074.10.496
MA0076.10.434
MA0077.10.3
MA0078.10.174
MA0079.20.187
MA0080.27.24392e-9
MA0081.10.0346
MA0083.10.00819
MA0084.10.828
MA0087.10.0676
MA0088.10.744
MA0090.13.32728e-4
MA0091.10.326
MA0092.10.581
MA0093.10.0712
MA0099.20.524
MA0100.10.114
MA0101.19.63324e-4
MA0102.20.0974
MA0103.13.40335e-6
MA0104.24.53115e-4
MA0105.10.00601
MA0106.10.567
MA0107.11.48993e-4
MA0108.20.546
MA0111.10.212
MA0112.20.153
MA0113.10.62
MA0114.17.64698e-4
MA0115.10.14
MA0116.11
MA0117.10.771
MA0119.10.81
MA0122.10.354
MA0124.10.0917
MA0125.10.133
MA0131.10.571
MA0135.10.35
MA0136.11.1244e-6
MA0137.20.255
MA0138.20.338
MA0139.10.072
MA0140.10.00279
MA0141.10.011
MA0142.10.0683
MA0143.10.541
MA0144.10.361
MA0145.10.133
MA0146.10.341
MA0147.10.0186
MA0148.10.0404
MA0149.10.411
MA0150.10.056
MA0152.10.22
MA0153.10.305
MA0154.10.193
MA0155.10.182
MA0156.10.0348
MA0157.10.0371
MA0159.10.115
MA0160.10.00147
MA0162.10.279
MA0163.10.947
MA0164.10.61
MA0258.10.034
MA0259.10.55



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12405

Novel motifP-value
10.139
100.792
1000.602
1010.409
1020.089
1030.0798
1040.736
1050.247
1060.122
1070.916
1080.974
1090.0413
110.115
1100.788
1110.392
1120.314
1130.0558
1140.484
1150.266
1160.855
1170.236
1180.373
1190.361
120.709
1200.663
1210.538
1220.0419
1230.0315
1240.146
1250.487
1260.346
1270.562
1280.0846
1290.213
130.874
1300.823
1310.37
1320.784
1330.808
1340.732
1350.755
1360.162
1370.55
1380.429
1390.00436
140.417
1400.848
1410.494
1420.939
1430.291
1440.565
1450.898
1460.146
1470.134
1480.0835
1490.578
150.0477
1500.546
1510.256
1520.273
1530.944
1540.224
1550.0426
1560.649
1570.693
1580.516
1590.17
160.56
1600.226
1610.16
1620.399
1630.681
1640.895
1650.507
1660.0381
1670.421
1680.856
1690.59
170.824
180.854
190.796
20.491
200.839
210.146
220.594
230.91
240.389
250.166
260.315
270.293
280.773
290.886
30.548
300.823
310.558
328.86577e-5
330.487
340.516
350.227
360.0648
370.338
380.342
390.674
40.567
400.0483
410.369
420.451
430.329
440.286
450.23
460.619
470.196
480.463
490.123
50.513
500.794
510.36
520.473
530.455
540.394
550.809
560.298
570.854
580.078
590.316
60.501
600.142
610.146
620.101
630.499
640.177
650.283
660.589
670.844
680.526
690.964
70.0715
700.0318
710.817
720.224
730.325
740.0464
750.263
760.616
770.941
780.0819
790.0363
80.136
800.502
810.604
820.174
830.11
840.226
850.371
860.771
870.14
880.574
890.346
90.7
900.211
910.904
920.594
930.537
940.456
950.144
960.97
970.614
980.0886
990.423



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12405


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002620 (skin fibroblast)

DOID: Disease
4 (disease)
17 (musculoskeletal system disease)
450 (myotonic disease)
7 (disease of anatomical entity)
66 (muscle tissue disease)
423 (myopathy)
0080000 (muscular disease)
11722 (myotonic dystrophy)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002097 (skin of body)
0002199 (integument)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000250 (human fibroblast of skin sample)
0000001 (sample)
0000408 (cellular fractionation sample)
0000350 (experimentally modified sample)
0000253 (human fibroblast- skin dystrophia myotonica sample)
0000406 (nuclear fraction sample)
0000667 (human Fibroblast - skin dystrophia myotonica, nuclear fraction sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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