Template:TimeCourse: Difference between revisions
From FANTOM5_SSTAR
mNo edit summary |
No edit summary |
||
| (2 intermediate revisions by the same user not shown) | |||
| Line 4: | Line 4: | ||
<tr><th scope="row" align="right">Series:</th><td>{{{series}}}</td></tr> | <tr><th scope="row" align="right">Series:</th><td>{{{series}}}</td></tr> | ||
<tr><th scope="row" align="right">Species:</th><td>{{{species}}}</td></tr> | <tr><th scope="row" align="right">Species:</th><td>{{{species}}}</td></tr> | ||
<tr><th scope="row" align="right">Genomic View:</th><td>[{{{zenbu_config}}} Zenbu]</td></tr> | <tr><th scope="row" align="right">Genomic View:</th><td><span class="plainlinks">[{{{zenbu_config}}} Zenbu]</span></td></tr> | ||
<tr><th scope="row" align="right">Expression table:</th><td>[{{{tet_config}}} | <tr><th scope="row" align="right">Expression table:</th><td><span class="plainlinks">[{{{tet_config}}} FILE]</span></td></tr> | ||
<tr><th scope="row" align="right">Link to TET:</th><td>[{{{tet_file}}} | <tr><th scope="row" align="right">Link to TET:</th><td><span class="plainlinks">[{{{tet_file}}} TET]</span></td></tr> | ||
<tr><th scope="row" align="right">Sample providers :</th><td>{{{collaborators}}}</td></tr> | <tr><th scope="row" align="right">Sample providers :</th><td>{{{collaborators}}}</td></tr> | ||
<tr><th scope="row" align="right">Germ layer:</th><td>{{{germ_layer}}}</td></tr> | <tr><th scope="row" align="right">Germ layer:</th><td>{{{germ_layer}}}</td></tr> | ||
| Line 70: | Line 70: | ||
dom: 'Blfrtip', | dom: 'Blfrtip', | ||
lengthMenu: [[-1], ["All"]], | lengthMenu: [[-1], ["All"]], | ||
buttons: ['copyHtml5', 'excelHtml5', 'csvHtml5', 'pdfHtml5'] | buttons: ['copyHtml5', 'excelHtml5', 'csvHtml5', 'pdfHtml5'], | ||
columns: [{title: "Sample"},{title: "Name"},{title: "Time point"},{title: "Donor/Replica"}] | |||
}); | }); | ||
} ); | } ); | ||
| Line 80: | Line 81: | ||
|?Time=Time point | |?Time=Time point | ||
|?Donor=Donor/Replica | |?Donor=Donor/Replica | ||
|format= | |format=table | ||
|class=cl_list stripe cell-border order-column compact | |class=cl_list stripe cell-border order-column compact | ||
|limit=2000 | |limit=2000 | ||
|searchlabel= | |searchlabel= | ||
|mainlabel=Sample | |mainlabel=Sample | ||
|headers= | |headers=hide | ||
}} | }} | ||
{{#arraymap:{{{samples|}}}|,|$|{{#set:sample=[[FF:$]]}}}} | {{#arraymap:{{{samples|}}}|,|$|{{#set:sample=[[FF:$]]}}}} | ||
Latest revision as of 10:57, 15 March 2022
| Series: | {{{series}}} |
|---|---|
| Species: | {{{species}}} |
| Genomic View: | [{{{zenbu_config}}} Zenbu] |
| Expression table: | [{{{tet_config}}} FILE] |
| Link to TET: | [{{{tet_file}}} TET] |
| Sample providers : | {{{collaborators}}} |
| Germ layer: | {{{germ_layer}}} |
| Primary cells or cell line: | {{{primary_cells}}} |
| Time span: | {{{time_span}}} |
| Number of time points: | {{{number_time_points}}} |
| Overview |
|---|
|
{{{TCOverview}}} |
| Sample description |
|---|
|
{{{TCSample_description}}} |
| Quality control |
|---|
|
{{{TCQuality_control}}} |
Profiled time course samples
Only samples that passed quality controls (Arner et al. 2015) are shown here. The entire set of samples are downloadable from FANTOM5 human / mouse samples
Property "Series" (as page type) with input value "{{{series}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "Collaborators" (as page type) with input value "{{{collaborators}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
