Personal tools

FFCP PHASE1:Mm9::chr10:83903404..83903420,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr10:83903404..83903420,-
|short_description=p1@Nuak1
|description=CAGE_peak_1_at_Nuak1_5end
|association_with_transcript=-62bp_to_ENSMUST00000020220_5end
|EntrezGene=77976
|EntrezGene=77976
|HGNC=
|HGNC=
|UniProt=Q641K5
|UniProt=Q641K5
|association_with_transcript=-62bp_to_ENSMUST00000020220_5end
|description=CAGE_peak_1_at_Nuak1_5end
|id=chr10:83903404..83903420,-
|ontology_enrichment_disease=
|phase1_expression=2.7225304007815,0.697950815278722,0.454999239389536,0,0,1.34303417529512,0.467225281191051,0,1.267098499365,1.40438715793196,0,0.0797721589953364,0.171200729931206,0,2.33176833270964,0.404950534779652,2.09868563438444,0.630924330716475,0.685572168028694,1.27316895539409,5.18764069921526,0.0992909512008853,0,0.319984845586813,0.22940928106717,0.57423196411502,0,0.430942465371778,0,0,0,0,0,0,0.577703239502549,0,0.612508068787107,0,0,0,0,0.683045484958446,0,13.3450627054112,14.6996550268296,11.5634453861859,8.60630478782843,243.97014998972,204.088463760324,242.84294394378,76.2925997858226,132.252359215774,1.51004345451963,0,0,41.1615097657515,33.5244124728345,34.5500301825886,7.68802551266472,6.34789175126439,6.97214543856797,16.6033820713875,9.78224275722253,12.1486461832989,9.88866362566974,9.2362414942993,26.664409836138,38.4218305321555,54.2296672373338,67.232957289182,68.3556124391991,7.14127461009509,4.8591079009355,18.618601480673,18.4023304355014,8.27296907949019,1.10115880999389,4.97980618532232,6.29786786350598,9.36392642884376,9.14876436024097,9.37644067002168,9.49222196604695,3.93933827022176,5.34793867218835,4.12480019663135,4.6982654663704,7.08317894136142,2.49896437999507,2.79614772395106,111.597828150146,3.44169550792555,3.39985666853875,0.539703191637817,0.649776417447669,0,4.63466586434781,7.15807354827843,5.45550609666024,5.3000936176551,6.05626705039726,65.4465034813021,89.181833897326,92.4386714099331,5.41227602528035,7.85415582972806,5.05524445014783,1.37020655662872,4.40194402200192,3.85949561568544,7.80683970447611,7.91610243611567,9.91646638201052,6.33035090321015,8.46638691377075,2.01066546127481,7.16865406429684,19.3763138272682,1.76922110389975,12.4560474459505,11.9254419968613,15.0311328471919,0,12.8823550685081,15.9179497178226,1.53274233125155,0.718890747035522,0,0.762421362438388,5.69204429738326,8.23501085073528,7.03664371832041,11.9938780932671,11.5071955798649,4.98691306942944,5.84068547043927,10.5912938404329,13.0627319140598,2.77995034277042,7.15502310014011,10.9301172088671,7.35686734187113,7.56260945182467,7.9873553452929,6.66757691683013,5.63700369253339,5.528401749024,7.24369438069244,3.66465587985832,15.3175924935934,14.4279921814438,17.7548543266336,19.7413546950174,13.9300866608867,18.314610140307,16.5198441459349,0,0,0,9.94203708170409,16.1822981386956,18.3663302690235,12.5474709860161,17.5120166255189,14.5011086114136,15.3472403535269,16.6329508867764,15.179494507732,9.87359099480883,12.9692296622485,13.9438352418872,14.1813987802572,10.7579556492615,12.0785776884335,10.5144974282064,35.9137097203703,0,1.32225283331772,8.95810652247983,7.43157349953403,3.60828891701861,2.8235693447268,3.33567065767305,3.04361001780095,0,3.12928013975621,5.27803938480566,3.38226002469956,3.8992817423824,3.59527763461689,1.29682829924817,2.58883655230677,10.8110703543257,12.9100819248994,7.88954149711563,11.2008230314923,12.2190066915604,7.78507600782536,12.9002535733485,13.2849133181642,10.047918581848,10.7355532611966,1.48226313543574,3.67059232575407,1.57247196090562,1.12431056192427,0.202860121388503,0.964708639009667,2.29163266603278,1.72617682470486,0.810676133875177,1.09824565275233,4.31304619582064,2.60498663367952,4.68056509671841,2.77836765741823,1.97337154874103,1.92977408545347,13.8564892624954,10.2325362356062,3.91115943460862,10.863685489612,10.7957514212711,11.5579317634853,23.3282768068293,18.1474292507753,26.4827042098401,23.0323277234726,26.4694915971429,24.415633892645,18.6499780415167,14.6095549167327,3.01582567878545,1.63171705145613,4.91764273019036,3.58717770196152,10.7568895291821,9.37693492737625,17.2131692645509,13.8859009962405,8.20321370482267,8.58965237452605,5.17016154558717,2.38968797952552,1.33679204449436,1.98153571552183,4.04810701674894,4.09158201075837,4.34816555741176,4.17717711348349,10.2196861349953,14.4233138970477,10.4247653986289,12.2077890999676,10.619611067197,4.37005145078967,5.13950046840077,4.90373207365335,4.72483028609236,10.1453598821496,9.8202751403924,14.5413491791002,15.329387270543,9.48110273807448,10.5418608574999,8.25084345985495,3.06395645178409,11.5239100180039,10.2193360188376,8.3591443662321,3.72414490648775,4.8159580752559,4.60737257685939,8.52501857520878,2.58138878870081,21.6068712281097,2.20528398054962,33.4719093471204,10.172258881842,17.6113740790215,18.7414580084924,29.381221054366,3.20628920292836,10.7546675166096,2.9048049735635,8.2554747185289,8.33375373163703,3.20226376907975,3.41735569302563,2.74533807847827,0.849892149969277,1.53946597556024,0.829199842826543,0,6.32671987162271,4.26970880966382,3.02414954301044,2.71814784818809,1.74690050996942,4.98998081623837,4.21532624199213,2.6175594198403,1.8146096260851,4.34937519160848,1.12738587736838,21.5303826303329,19.1931848930233,25.2786544847262,26.2194441659794,23.4849014432182,17.4862285582173,9.76532886329626,4.8235298435827,1.44950472495604,1.15212002503146,2.8441000856536,5.6763060281246,6.88163413004343,4.15746633528944,3.93858730468459,2.58285761215644,3.72605893511903,2.80610101631697,4.34155734777035,2.89585865288999,3.42809029465258,2.63136277997332,2.50150788264857,1.8700304349051,7.70883304291719,2.44184548711471,1.07656627931371,0.671538465456314,7.53439416725543,6.38120416534019,9.15758121336325,15.8632600518509,5.01572104035363,11.2950368523413,6.44455331110048,13.7494923225455,13.5764014051513,8.22099023724771,9.06472676867641,12.8254275044043,10.3573876741571,14.0474146785103,17.6038505995619,14.2188666190322,17.5570944296454,13.4879548545766,13.3708694387562,10.2710449687711,9.74370594785075,7.77863547305653,10.5077879191836,8.98573786857083,7.83361356467772,11.1530891951705,8.86543804514558,8.70866019469906,10.5641501468034,8.38557846751954,10.0021675169445,9.96605203125757,7.7163688185482,3.70877310722976,9.12633304833263,11.6575545811041,9.58369353260422,11.6833733074187,11.3370204973216,10.257922465271,12.0998889285097,11.1586063452391,8.15516105457313,9.50628796921032,7.85599180320834,11.1516917036724,10.5399796141853,5.72923460437565,8.83139994760006,9.45242393807593,18.2361721894701,10.292990771598,11.8179079726564,9.94699326757986,10.5883881177367,11.5933917810211
|phase1_expression=2.7225304007815,0.697950815278722,0.454999239389536,0,0,1.34303417529512,0.467225281191051,0,1.267098499365,1.40438715793196,0,0.0797721589953364,0.171200729931206,0,2.33176833270964,0.404950534779652,2.09868563438444,0.630924330716475,0.685572168028694,1.27316895539409,5.18764069921526,0.0992909512008853,0,0.319984845586813,0.22940928106717,0.57423196411502,0,0.430942465371778,0,0,0,0,0,0,0.577703239502549,0,0.612508068787107,0,0,0,0,0.683045484958446,0,13.3450627054112,14.6996550268296,11.5634453861859,8.60630478782843,243.97014998972,204.088463760324,242.84294394378,76.2925997858226,132.252359215774,1.51004345451963,0,0,41.1615097657515,33.5244124728345,34.5500301825886,7.68802551266472,6.34789175126439,6.97214543856797,16.6033820713875,9.78224275722253,12.1486461832989,9.88866362566974,9.2362414942993,26.664409836138,38.4218305321555,54.2296672373338,67.232957289182,68.3556124391991,7.14127461009509,4.8591079009355,18.618601480673,18.4023304355014,8.27296907949019,1.10115880999389,4.97980618532232,6.29786786350598,9.36392642884376,9.14876436024097,9.37644067002168,9.49222196604695,3.93933827022176,5.34793867218835,4.12480019663135,4.6982654663704,7.08317894136142,2.49896437999507,2.79614772395106,111.597828150146,3.44169550792555,3.39985666853875,0.539703191637817,0.649776417447669,0,4.63466586434781,7.15807354827843,5.45550609666024,5.3000936176551,6.05626705039726,65.4465034813021,89.181833897326,92.4386714099331,5.41227602528035,7.85415582972806,5.05524445014783,1.37020655662872,4.40194402200192,3.85949561568544,7.80683970447611,7.91610243611567,9.91646638201052,6.33035090321015,8.46638691377075,2.01066546127481,7.16865406429684,19.3763138272682,1.76922110389975,12.4560474459505,11.9254419968613,15.0311328471919,0,12.8823550685081,15.9179497178226,1.53274233125155,0.718890747035522,0,0.762421362438388,5.69204429738326,8.23501085073528,7.03664371832041,11.9938780932671,11.5071955798649,4.98691306942944,5.84068547043927,10.5912938404329,13.0627319140598,2.77995034277042,7.15502310014011,10.9301172088671,7.35686734187113,7.56260945182467,7.9873553452929,6.66757691683013,5.63700369253339,5.528401749024,7.24369438069244,3.66465587985832,15.3175924935934,14.4279921814438,17.7548543266336,19.7413546950174,13.9300866608867,18.314610140307,16.5198441459349,0,0,0,9.94203708170409,16.1822981386956,18.3663302690235,12.5474709860161,17.5120166255189,14.5011086114136,15.3472403535269,16.6329508867764,15.179494507732,9.87359099480883,12.9692296622485,13.9438352418872,14.1813987802572,10.7579556492615,12.0785776884335,10.5144974282064,35.9137097203703,0,1.32225283331772,8.95810652247983,7.43157349953403,3.60828891701861,2.8235693447268,3.33567065767305,3.04361001780095,0,3.12928013975621,5.27803938480566,3.38226002469956,3.8992817423824,3.59527763461689,1.29682829924817,2.58883655230677,10.8110703543257,12.9100819248994,7.88954149711563,11.2008230314923,12.2190066915604,7.78507600782536,12.9002535733485,13.2849133181642,10.047918581848,10.7355532611966,1.48226313543574,3.67059232575407,1.57247196090562,1.12431056192427,0.202860121388503,0.964708639009667,2.29163266603278,1.72617682470486,0.810676133875177,1.09824565275233,4.31304619582064,2.60498663367952,4.68056509671841,2.77836765741823,1.97337154874103,1.92977408545347,13.8564892624954,10.2325362356062,3.91115943460862,10.863685489612,10.7957514212711,11.5579317634853,23.3282768068293,18.1474292507753,26.4827042098401,23.0323277234726,26.4694915971429,24.415633892645,18.6499780415167,14.6095549167327,3.01582567878545,1.63171705145613,4.91764273019036,3.58717770196152,10.7568895291821,9.37693492737625,17.2131692645509,13.8859009962405,8.20321370482267,8.58965237452605,5.17016154558717,2.38968797952552,1.33679204449436,1.98153571552183,4.04810701674894,4.09158201075837,4.34816555741176,4.17717711348349,10.2196861349953,14.4233138970477,10.4247653986289,12.2077890999676,10.619611067197,4.37005145078967,5.13950046840077,4.90373207365335,4.72483028609236,10.1453598821496,9.8202751403924,14.5413491791002,15.329387270543,9.48110273807448,10.5418608574999,8.25084345985495,3.06395645178409,11.5239100180039,10.2193360188376,8.3591443662321,3.72414490648775,4.8159580752559,4.60737257685939,8.52501857520878,2.58138878870081,21.6068712281097,2.20528398054962,33.4719093471204,10.172258881842,17.6113740790215,18.7414580084924,29.381221054366,3.20628920292836,10.7546675166096,2.9048049735635,8.2554747185289,8.33375373163703,3.20226376907975,3.41735569302563,2.74533807847827,0.849892149969277,1.53946597556024,0.829199842826543,0,6.32671987162271,4.26970880966382,3.02414954301044,2.71814784818809,1.74690050996942,4.98998081623837,4.21532624199213,2.6175594198403,1.8146096260851,4.34937519160848,1.12738587736838,21.5303826303329,19.1931848930233,25.2786544847262,26.2194441659794,23.4849014432182,17.4862285582173,9.76532886329626,4.8235298435827,1.44950472495604,1.15212002503146,2.8441000856536,5.6763060281246,6.88163413004343,4.15746633528944,3.93858730468459,2.58285761215644,3.72605893511903,2.80610101631697,4.34155734777035,2.89585865288999,3.42809029465258,2.63136277997332,2.50150788264857,1.8700304349051,7.70883304291719,2.44184548711471,1.07656627931371,0.671538465456314,7.53439416725543,6.38120416534019,9.15758121336325,15.8632600518509,5.01572104035363,11.2950368523413,6.44455331110048,13.7494923225455,13.5764014051513,8.22099023724771,9.06472676867641,12.8254275044043,10.3573876741571,14.0474146785103,17.6038505995619,14.2188666190322,17.5570944296454,13.4879548545766,13.3708694387562,10.2710449687711,9.74370594785075,7.77863547305653,10.5077879191836,8.98573786857083,7.83361356467772,11.1530891951705,8.86543804514558,8.70866019469906,10.5641501468034,8.38557846751954,10.0021675169445,9.96605203125757,7.7163688185482,3.70877310722976,9.12633304833263,11.6575545811041,9.58369353260422,11.6833733074187,11.3370204973216,10.257922465271,12.0998889285097,11.1586063452391,8.15516105457313,9.50628796921032,7.85599180320834,11.1516917036724,10.5399796141853,5.72923460437565,8.83139994760006,9.45242393807593,18.2361721894701,10.292990771598,11.8179079726564,9.94699326757986,10.5883881177367,11.5933917810211
|short_description=p1@Nuak1
}}
}}

Revision as of 15:49, 17 April 2012

Short description:p1@Nuak1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nuak1_5end
Coexpression cluster:NA
Association with transcript: -62bp_to_ENSMUST00000020220_5end
EntrezGene:Nuak1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nuak1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.35
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.70
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.56
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2243.97
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8204.09
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3242.84
Mouse Astrocytes, donor2.CNhs12078.11552-120C476.29
Mouse Astrocytes, donor3.CNhs12107.11633-122C4132.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C141.16
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E133.52
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C534.55
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.60
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C712.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C826.66
Mouse Microglia, donor2.CNhs12634.11736-123E838.42
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D554.23
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F567.23
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D968.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D92.50
Mouse Schwann, donor2.CNhs12573.11746-123F92.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3111.60
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H165.45
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I889.18
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B692.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C57.81
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I19.92
adrenal gland, embryo E18.CNhs11026.1262-18F56.33
adrenal gland, neonate N00.CNhs11191.1311-23C18.47
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A87.17
aorta, adult.CNhs10498.46-23H119.38
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F512.46
bone (os femoris), neonate N16.CNhs11225.1525-43A611.93
bone (os femoris), neonate N20.CNhs11195.1350-25C315.03
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.88
cerebellum, neonate N30.CNhs11135.1395-42I215.92
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D511.99
cortex, neonate N30.CNhs11107.1392-42F211.51
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.59
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.06
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G47.16
eyeball, embryo E12.CNhs11016.345-16C610.93
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C97.56
eyeball, embryo E17.CNhs11023.1261-18D47.99
eyeball, neonate N00.CNhs11207.633-15C66.67
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G85.53
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H215.32
forelimb, embryo E13.CNhs10589.384-1E214.43
forelimb, embryo E14.CNhs10577.413-26A817.75
forelimb, embryo E15.CNhs11007.437-20E719.74
forelimb, embryo E17.CNhs10598.1517-43C413.93
forelimb, embryo E18.CNhs11008.1520-43B518.31
gonad, embryo E13.CNhs11044.1564-45I616.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E99.94
heart, embryo E12.CNhs11015.353-12F516.18
heart, embryo E13.CNhs11013.376-3I918.37
heart, embryo E14.CNhs10597.403-26D412.55
heart, embryo E15.CNhs11017.431-16C817.51
heart, embryo E16.CNhs11021.457-17C614.50
heart, embryo E17.CNhs11025.479-18E515.35
heart, embryo E18.CNhs11030.1283-20G316.63
heart, neonate N00.CNhs11213.639-21E315.18
heart, neonate N03.CNhs11221.1349-25I29.87
heart, neonate N10.CNhs11118.749-24G112.97
heart, neonate N16.CNhs11209.782-15G113.94
heart, neonate N20.CNhs11127.821-26I614.18
heart, neonate N25.CNhs11196.1351-25D310.76
heart, neonate N30.CNhs11202.1390-42D212.08
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G135.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I58.96
intestine, embryo E13.CNhs11010.381-16D57.43
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I910.81
kidney, embryo E15.CNhs10997.434-16F812.91
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I211.20
kidney, embryo E18.CNhs11001.1288-20C712.22
kidney, neonate N00.CNhs11214.646-21G77.79
kidney, neonate N10.CNhs11206.758-6D512.90
kidney, neonate N20.CNhs11113.832-19I113.28
kidney, neonate N25.CNhs11122.1353-25F310.05
kidney, neonate N30.CNhs11203.1385-42H110.74
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B113.86
lung, embryo E12.CNhs10522.354-16G210.23
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C510.86
lung, embryo E16.CNhs10998.458-17B610.80
lung, embryo E17.CNhs10605.480-44A611.56
lung, embryo E18.CNhs10583.1287-20I623.33
lung, neonate N00.CNhs11224.640-42C618.15
lung, neonate N06.CNhs11212.683-20E526.48
lung, neonate N07.CNhs11111.715-19A323.03
lung, neonate N10.CNhs11219.750-23E626.47
lung, neonate N20.CNhs11109.822-18A424.42
lung, neonate N25.CNhs11119.1359-25C718.65
lung, neonate N30.CNhs11133.1394-42H214.61
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C210.76
medulla oblongata, neonate N30.CNhs11200.1396-42A39.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.89
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I710.22
ovary, embryo E18.CNhs11040.505-44H714.42
ovary, neonate N00.CNhs11217.1299-22I410.42
oviduct, adult pregnant day01.CNhs10500.988-6G612.21
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E54.90
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I710.15
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D714.54
pancreas, neonate N02.CNhs11139.1539-43D815.33
pancreas, neonate N16.CNhs11136.787-43B69.48
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E611.52
pituitary gland, embryo E13.CNhs11009.370-44C710.22
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G321.61
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C333.47
skin, neonate N00.CNhs11124.650-25G410.17
skin, neonate N03.CNhs11215.662-22H317.61
skin, neonate N06.CNhs11097.693-20I518.74
skin, neonate N10.CNhs11108.762-6C429.38
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C910.75
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F28.33
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E36.33
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D43.02
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B84.99
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F521.53
testis, embryo E15.CNhs11034.443-27C519.19
testis, embryo E16.CNhs11033.470-26G525.28
testis, embryo E17.CNhs11029.486-18I526.22
testis, embryo E18.CNhs11027.503-18G523.48
testis, neonate N00.CNhs11189.1300-22B717.49
testis, neonate N07.CNhs11222.726-26I49.77
testis, neonate N10.CNhs11204.763-44D94.82
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I26.88
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F83.73
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C44.34
thymus, neonate N07.CNhs11211.713-19D32.90
thymus, neonate N10.CNhs11194.748-24E43.43
thymus, neonate N20.CNhs11186.820-7A22.63
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B47.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E47.53
uterus, adult pregnant day19.CNhs10497.590-15F56.38
uterus, adult.CNhs10509.92-27E59.16
vagina, adult.CNhs10502.89-27D515.86
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I814.22
whole body, embryo E12.CNhs10587.857-27C917.56
whole body, embryo E13.CNhs10512.372-23H213.49
whole body, embryo E14.5.CNhs10578.420-27D213.37
whole body, embryo E14.CNhs10519.395-14B110.27
whole body, embryo E16.CNhs10514.453-14F29.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.58
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.83
whole body, embryo E17.5.CNhs10513.490-9F99.45
whole body, embryo E17.CNhs10517.475-3I518.24
whole body, embryo E18.CNhs10516.493-3B310.29
whole body, neonate N00.CNhs10525.657-19C211.82
whole body, neonate N01.CNhs10576.659-23C69.95
whole body, neonate N06.CNhs10515.692-21D110.59
whole body, neonate N10.CNhs10518.761-6B411.59





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:83903404..83903420,-&oldid=737434"