FFCP PHASE1:Mm9::chr10:23506949..23506966,-: Difference between revisions
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|description=CAGE_peak_4_at_Gm10279_5end,CAGE_peak_4_at_Gm14059_5end,CAGE_peak_4_at_Gm14958_5end,CAGE_peak_4_at_Gm5642_5end,CAGE_peak_4_at_Gm6646_5end,CAGE_peak_4_at_Gm7643_5end,CAGE_peak_4_at_Gm7671_5end,CAGE_peak_4_at_Gm7698_5end,CAGE_peak_4_at_Gm7711_5end,CAGE_peak_4_at_Rps12_5end | |description=CAGE_peak_4_at_Gm10279_5end,CAGE_peak_4_at_Gm14059_5end,CAGE_peak_4_at_Gm14958_5end,CAGE_peak_4_at_Gm5642_5end,CAGE_peak_4_at_Gm6646_5end,CAGE_peak_4_at_Gm7643_5end,CAGE_peak_4_at_Gm7671_5end,CAGE_peak_4_at_Gm7698_5end,CAGE_peak_4_at_Gm7711_5end,CAGE_peak_4_at_Rps12_5end | ||
|id=chr10:23506949..23506966,- | |id=chr10:23506949..23506966,- | ||
|ontology_enrichment_celltype=CL:0000988!1.10e-07!32;CL:0002032!1.10e-07!32;CL:0000037!1.10e-07!32;CL:0000566!1.10e-07!32;CL:0000837!1.10e-07!32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0.503637815735669,0.233612640595526,1.29123323441576,9.57363310631334,14.7460651582856,7.0199366972457,5.82336760665956,0.684802919724823,0.437102012094987,1.99865857089398,1.82227740650843,1.39912375625629,1.41957974411207,0.548457734422955,1.69755860719212,2.04103896362567,1.48936426801328,3.91799683708403,0.799962113967033,0.91763712426868,1.14846392823004,1.29228598847722,0.861884930743556,0.760093677825496,1.26015064879965,2.43903561720835,3.17515336729816,1.84519436275371,0,0.577703239502549,0.664938581433969,0.816677425049476,0.418531630736908,2.3440060335714,1.57057123192139,0,0,0.971020706062307,0.755380907853464,0.608261587317087,0.917733760808408,0,0.436050312760893,0,0.58328969722285,0.979904951377538,0,1.8456086666351,0.725362142011344,0.672187598284928,1.02903774414379,0.286533439938757,0.515672092277442,0.606949382578793,0.528990979272033,0,1.0165335962074,0,0.449949858640699,0,0,0.299600110518405,0,0.207379224616955,0.405017814995072,0.630974884054146,0.856952953211411,1.32521124570968,0.61245399607477,0.383381884072945,0.919218786610021,0,0.255374676170375,0.614426133024974,0.395658863190582,1.18933936683133,1.04182674111352,1.11673199600552,1.12552522006336,0.61119299110724,0.294628585473668,1.28134512719193,0.745597783301202,3.40767869999328,1.51143120213571,1.44932244350839,0,0.679971333707751,0,0,0.448026887097336,0.280888840263504,1.1930122580464,2.33807404142582,1.06001872353102,0.704217098883403,0,0,0,0.865964164044856,2.28023878927589,0.505524445014783,0.5709193985953,0.258937883647172,0.29688427812965,0.693941307064543,1.21786191324856,0.461230994512117,0.904335843315735,0,0.125666591329675,0.741584903203122,0.144599356919912,0,0.808834249737046,0.441683036920787,0.969750506270444,1.86391761218122,0,0,0.510914110417183,2.87556298814209,3.59941638596045,3.81210681219194,0.449371918214468,2.74500361691176,1.13088916901578,1.39059456153821,3.58001640262463,0.41557608911912,0.811206315338788,0.712875546952214,0.995255764880744,1.26361379216837,0.420883711772948,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.374806898238915,0,0.862271971731369,0,0.527853372491847,0.876782929710299,0.278047249225598,1.0447564995665,0.823128545631774,0.199034266818493,5.61770549850588,6.17634977075316,3.12579849335152,0.207125772535502,1.17263029990548,1.2604344302271,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0.268412837520744,1.68231958851302,0.823236899034275,0.330418782983798,0.528901133327089,0.213288250535234,1.16118335930219,0.644337306610467,0.80673409849337,0.444756087689741,0.951128130562796,0,0.494096864172033,0.251335208800269,0.198956472041151,0.19496408711912,0,0.648414149624083,0.597423819763102,0,0.456994050438915,0,0.203651327845314,0.387904974335251,0.350679099451593,0.379419222745544,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0.333690211432188,1.76903095601883,1.57403478669398,0.811440485554012,0.241177159752417,0.763877555344259,0.287696137450811,0.486405680325106,1.37280706594041,0,0,0.624075346229121,0.505157755894224,0,0,0,0.37898282354097,0.488894929326078,0.678980343100753,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0,0.144649058581512,1.50791283939272,0,0.491764273019036,0.275936746304732,0.481651769963376,0.117211686592203,2.13115428989678,0,0,0,0.430846795465598,0.716906393857656,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0.81443479676788,0,0,0.728341908464944,0.302323556964751,0.754420319023592,0,0.614870295887855,0,0.363533729477506,1.06949213515416,0.632073515871632,0,1.03135543248187,0,1.08036656418786,0.388076051348264,0.643011105094777,0,0.535106452806212,0.329098041204242,0.608929898229199,1.87737366450968,1.0591603543191,0,0.16488625294148,0.645857706783622,0.603129249281559,0.954978752025092,0.492422699235184,0.291480836629851,0.927126510052548,1.19609616558497,0.619160603889667,1.11116716421827,0.941842285023455,0.546776910884101,1.14389086603261,2.03974115992626,2.09927178485487,1.10559979043539,0,0.474503990371703,0.406638934253697,0.756037385752609,0.418176592028937,0,0.134864346384821,0.41326727862668,0,0.129614973291793,0,12.9649375897364,0.448549638131936,0.66183396182839,0,1.29159823477731,1.01373675294467,0.704143431874524,1.8228613878153,1.78260885523708,4.83168241652012,4.89651010638371,2.52808896502543,1.62180172232131,1.64337531463724,1.29920822977795,0.895133478337407,0.79472541912506,1.08175904567972,1.47689527174577,1.31256384932592,1.295515713135,0.907435666231565,1.16949456887703,1.15454209968395,0.350630706544707,0,0.221985953374065,2.15313255862742,1.34307693091263,0.386379188064381,0.563047426353546,0.36630324853453,1.50057865355346,0,2.82375921308533,3.68260189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| |phase1_expression=0.640595388419176,0,0.454999239389536,0,0,0.503637815735669,0.233612640595526,1.29123323441576,9.57363310631334,14.7460651582856,7.0199366972457,5.82336760665956,0.684802919724823,0.437102012094987,1.99865857089398,1.82227740650843,1.39912375625629,1.41957974411207,0.548457734422955,1.69755860719212,2.04103896362567,1.48936426801328,3.91799683708403,0.799962113967033,0.91763712426868,1.14846392823004,1.29228598847722,0.861884930743556,0.760093677825496,1.26015064879965,2.43903561720835,3.17515336729816,1.84519436275371,0,0.577703239502549,0.664938581433969,0.816677425049476,0.418531630736908,2.3440060335714,1.57057123192139,0,0,0.971020706062307,0.755380907853464,0.608261587317087,0.917733760808408,0,0.436050312760893,0,0.58328969722285,0.979904951377538,0,1.8456086666351,0.725362142011344,0.672187598284928,1.02903774414379,0.286533439938757,0.515672092277442,0.606949382578793,0.528990979272033,0,1.0165335962074,0,0.449949858640699,0,0,0.299600110518405,0,0.207379224616955,0.405017814995072,0.630974884054146,0.856952953211411,1.32521124570968,0.61245399607477,0.383381884072945,0.919218786610021,0,0.255374676170375,0.614426133024974,0.395658863190582,1.18933936683133,1.04182674111352,1.11673199600552,1.12552522006336,0.61119299110724,0.294628585473668,1.28134512719193,0.745597783301202,3.40767869999328,1.51143120213571,1.44932244350839,0,0.679971333707751,0,0,0.448026887097336,0.280888840263504,1.1930122580464,2.33807404142582,1.06001872353102,0.704217098883403,0,0,0,0.865964164044856,2.28023878927589,0.505524445014783,0.5709193985953,0.258937883647172,0.29688427812965,0.693941307064543,1.21786191324856,0.461230994512117,0.904335843315735,0,0.125666591329675,0.741584903203122,0.144599356919912,0,0.808834249737046,0.441683036920787,0.969750506270444,1.86391761218122,0,0,0.510914110417183,2.87556298814209,3.59941638596045,3.81210681219194,0.449371918214468,2.74500361691176,1.13088916901578,1.39059456153821,3.58001640262463,0.41557608911912,0.811206315338788,0.712875546952214,0.995255764880744,1.26361379216837,0.420883711772948,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.374806898238915,0,0.862271971731369,0,0.527853372491847,0.876782929710299,0.278047249225598,1.0447564995665,0.823128545631774,0.199034266818493,5.61770549850588,6.17634977075316,3.12579849335152,0.207125772535502,1.17263029990548,1.2604344302271,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0.162137619091711,0.292399974850665,0.439100230582101,0.268412837520744,1.68231958851302,0.823236899034275,0.330418782983798,0.528901133327089,0.213288250535234,1.16118335930219,0.644337306610467,0.80673409849337,0.444756087689741,0.951128130562796,0,0.494096864172033,0.251335208800269,0.198956472041151,0.19496408711912,0,0.648414149624083,0.597423819763102,0,0.456994050438915,0,0.203651327845314,0.387904974335251,0.350679099451593,0.379419222745544,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0.333690211432188,1.76903095601883,1.57403478669398,0.811440485554012,0.241177159752417,0.763877555344259,0.287696137450811,0.486405680325106,1.37280706594041,0,0,0.624075346229121,0.505157755894224,0,0,0,0.37898282354097,0.488894929326078,0.678980343100753,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0,0.144649058581512,1.50791283939272,0,0.491764273019036,0.275936746304732,0.481651769963376,0.117211686592203,2.13115428989678,0,0,0,0.430846795465598,0.716906393857656,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0.178065603667255,0.81443479676788,0,0,0.728341908464944,0.302323556964751,0.754420319023592,0,0.614870295887855,0,0.363533729477506,1.06949213515416,0.632073515871632,0,1.03135543248187,0,1.08036656418786,0.388076051348264,0.643011105094777,0,0.535106452806212,0.329098041204242,0.608929898229199,1.87737366450968,1.0591603543191,0,0.16488625294148,0.645857706783622,0.603129249281559,0.954978752025092,0.492422699235184,0.291480836629851,0.927126510052548,1.19609616558497,0.619160603889667,1.11116716421827,0.941842285023455,0.546776910884101,1.14389086603261,2.03974115992626,2.09927178485487,1.10559979043539,0,0.474503990371703,0.406638934253697,0.756037385752609,0.418176592028937,0,0.134864346384821,0.41326727862668,0,0.129614973291793,0,12.9649375897364,0.448549638131936,0.66183396182839,0,1.29159823477731,1.01373675294467,0.704143431874524,1.8228613878153,1.78260885523708,4.83168241652012,4.89651010638371,2.52808896502543,1.62180172232131,1.64337531463724,1.29920822977795,0.895133478337407,0.79472541912506,1.08175904567972,1.47689527174577,1.31256384932592,1.295515713135,0.907435666231565,1.16949456887703,1.15454209968395,0.350630706544707,0,0.221985953374065,2.15313255862742,1.34307693091263,0.386379188064381,0.563047426353546,0.36630324853453,1.50057865355346,0,2.82375921308533,3.68260189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| ||
|short_description=p4@Gm10279,p4@Gm14059,p4@Gm14958,p4@Gm5642,p4@Gm6646,p4@Gm7643,p4@Gm7671,p4@Gm7698,p4@Gm7711,p4@Rps12 | |short_description=p4@Gm10279,p4@Gm14059,p4@Gm14958,p4@Gm5642,p4@Gm6646,p4@Gm7643,p4@Gm7671,p4@Gm7698,p4@Gm7711,p4@Rps12 | ||
}} | }} | ||
Revision as of 20:18, 17 April 2012
| Short description: | p4@Gm10279, p4@Gm14059, p4@Gm14958, p4@Gm5642, p4@Gm6646, p4@Gm7643, p4@Gm7671, p4@Gm7698, p4@Gm7711, p4@Rps12 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Gm10279_5end, CAGE_peak_4_at_Gm14059_5end, CAGE_peak_4_at_Gm14958_5end, CAGE_peak_4_at_Gm5642_5end, CAGE_peak_4_at_Gm6646_5end, CAGE_peak_4_at_Gm7643_5end, CAGE_peak_4_at_Gm7671_5end, CAGE_peak_4_at_Gm7698_5end, CAGE_peak_4_at_Gm7711_5end, CAGE_peak_4_at_Rps12_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 48bp_to_ENSMUST00000073926, NM_011295, uc007epw.2, uc007epx.2_5end |
| EntrezGene: | 100038969,100503211,20042,434843,626048,665463,665522,665579,665611,670832 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
