Personal tools

FFCP PHASE1:Mm9::chr13:21879110..21879125,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_6_at_Hist1h2ab_5end,CAGE_peak_6_at_Hist1h2ac_5end,CAGE_peak_6_at_Hist1h2ae_5end,CAGE_peak_6_at_Hist1h2ag_5end,CAGE_peak_6_at_Hist1h2ai_5end,CAGE_peak_6_at_Hist1h2an_5end,CAGE_peak_6_at_Hist1h2ao_5end,CAGE_peak_6_at_Hist1h2ap_5end,CAGE_peak_7_at_Hist1h2ad_5end,CAGE_peak_7_at_Hist1h2ah_5end
|description=CAGE_peak_6_at_Hist1h2ab_5end,CAGE_peak_6_at_Hist1h2ac_5end,CAGE_peak_6_at_Hist1h2ae_5end,CAGE_peak_6_at_Hist1h2ag_5end,CAGE_peak_6_at_Hist1h2ai_5end,CAGE_peak_6_at_Hist1h2an_5end,CAGE_peak_6_at_Hist1h2ao_5end,CAGE_peak_6_at_Hist1h2ap_5end,CAGE_peak_7_at_Hist1h2ad_5end,CAGE_peak_7_at_Hist1h2ah_5end
|id=chr13:21879110..21879125,-
|id=chr13:21879110..21879125,-
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=57.1731384164114,13.6100408979351,8.18998630901165,2.72217790176147,6.01074875935617,77.5602236232931,50.6939430092291,6.58528949552039,3.23814060948833,1.63845168425395,0,0.0797721589953364,4.96482116800497,4.54586092578786,650.563364825989,814.15305017449,1359.94829108112,54.417223524296,40.7229867809044,172.30219863,13.9470995847754,303.731019723508,208.176231943731,42.2379996174594,79.8344298113752,47.6612530215467,55.9990595006797,49.7738547504404,63.0877752595161,139.624691887002,189.801317120941,2825.88649689536,3741.43910287694,3946.19385728442,396.882125538251,550.23667613661,459.176882234068,572.132739217353,1139.96826766022,480.071273223973,356.468281746795,622.254436797144,358.792150890023,16.1147927008739,12.2666086775613,11.0128051297009,82.1510911565441,235.903219203643,18.4536393496956,18.6652703111312,91.6911061646124,73.3138078261355,69.9653467260761,19.5847778343063,12.0993767691287,60.9704863405194,32.0917452731408,13.4074743992135,68.1806473096844,78.2906649322609,70.3552857891859,77.2565533117621,77.3686472616691,39.5955875603816,39.554654502679,47.6021677013887,136.917250506911,139.471244831724,191.203645096833,320.774109476097,250.286704008145,58.8441027871835,74.874435382597,271.684592658768,421.72007248024,288.634698995547,6.60695285996332,1.27687338085188,1.0752457327937,41.1485217718205,34.399353994506,54.174990537903,1.95428099300967,4.50210088025344,2.13917546887534,66.5860603170489,47.6945130676995,28.7055146570963,6.20954785332109,72.6242692626209,11.0148505706638,3.44169550792555,0.679971333707751,1.07940638327563,0,0.448026887097336,57.72265667415,112.824873546674,205.750515645472,155.46941278455,66.7597809741466,21.815501160434,12.7402619853323,14.2213340630666,355.911271422436,275.148813905957,249.729075837303,42.5905871352094,22.0097201100096,1.92974780784272,352.695669315554,235.656280213597,163.506387554545,105.505848386836,52.7973295039315,29.028982597155,1.97755974187499,3.47038456607788,104.384045130085,134.428252306297,292.835853478482,417.962468202561,31.6865994070808,0.292780797011547,0.41889341362691,30.9103036802396,626.034025543433,905.253221069052,466.220663131074,0.149790639404823,1.37250180845588,33.0470946056833,1.39059456153821,1.53429274398198,0.83115217823824,2.27137768294861,144.81557539515,225.301023774878,2.27450482590307,2.31486041475121,330.896286454156,368.762975511291,223.457103088438,290.86029842293,182.950146217921,213.565571714845,216.638387182093,4.13925393182425,318.825061547674,178.516139678421,147.271090925225,197.276159184817,199.637924943979,76.9637288013988,125.732885345253,221.92320750262,367.257496964822,407.124389055479,392.713956164709,120.961451160733,234.995112101058,265.051354470614,104.641173128663,196.370703283909,212.580081558807,170.447381502049,140.5752623334,81.3854436299171,84.4192030056155,53.354425825706,9.56611952641098,8.77199924551994,20.8572609526498,20.2651692328161,0.420579897128254,35.810805107991,3.30418782983798,47.3366514327744,386.478309969844,272.181379420434,116.238450112528,74.8245876352601,75.6085349072559,70.5737072877594,73.5520045393993,44.4687177754829,76.1545682664817,81.771110008913,49.9108063024948,69.2090944663751,76.5128696556418,41.8196673834171,306.50332794018,395.528350654881,129.613896024043,211.390078303436,188.327865039765,83.0408107501372,41.546404890637,4.87113488332687,15.3858753284547,10.2419646055094,1.48226313543574,353.878469223836,345.550713409011,445.22698252201,487.067151453795,433.154178915341,554.320479328151,299.203982948843,258.119281025856,373.952644762167,109.263836960789,106.80445198086,48.989914678986,31.3197808654419,26.0126249606773,6.75420929908714,13.1174765018289,380.688246246904,151.068533161758,481.566808344209,379.963511979085,97.8236543460204,41.4195935141664,15.6106918286239,56.118111301804,95.8942106179195,32.3693180374699,12.2897486036803,22.1036776788346,22.4206040801343,4.52373851817817,8.15858525728064,30.4893849271802,12.6930903300177,0.963303539926752,1.05490517932983,153.607043817945,30.5489821917291,152.074961758636,131.968295572264,78.6295401724716,74.5582649611962,59.932843328164,65.1076020814315,84.6054366500529,53.4828219977701,44.6675189079572,0.963963949265421,12.3487874131194,198.365082485322,126.400280458375,12.3727592229402,0,404.472539834199,238.835610002153,160.880133031781,79.7315110778086,42.426050416262,57.1126527901769,76.3420831902762,101.245255461261,19.2782422340848,21.0837217149998,37.1287955693473,1.70219802876894,326.810885666828,245.781499187234,159.895428133568,64.5518450457876,106.664552926038,65.6550592202463,130.615463170163,39.659518662767,1.90648863777438,1.98475558249466,30.6688430471153,55.8666916367833,113.750176414502,147.186100155867,89.6209312608034,50.4261847369642,0.370850604021019,361.221042006661,312.469718096319,426.873385587185,1243.98529005898,723.932630010549,856.545480485221,186.806294563247,249.953293850053,252.491352140682,0,177.464492399017,115.078818393796,216.874724370177,161.207076227155,140.188765925046,130.548687300506,58.1053793749112,36.1223199937961,43.0321711328752,3.72803587852155,17.4744810992099,166.11288265486,310.565586587972,132.032356885608,279.631017829288,206.29542922424,149.865193750628,105.335347338756,51.2762194241726,41.310884661247,18.1458903942455,194.978861427586,453.496306604097,451.72278961091,638.430924112885,464.574275257114,344.910831900276,681.988980576303,583.964390448278,474.74424765619,586.868618050154,607.679417819738,519.255588581401,538.978736869126,325.50217257567,4.98806843953465,57.7163478772568,138.51819460503,53.8909618528692,1.54551675225752,12.5747258552292,9.89018771043231,15.8632600518509,1.50471631210609,4.51801474093653,3.68260189205742,4.01026859407578,6.8741272937475,0.685082519770642,2.2661816921691,2.70009000092722,2.2516060161211,0,0,539.797994785303,32.3210147454835,207.612064597027,159.234899679733,207.936257326958,164.356096554313,85.3427434758202,102.811493562208,70.6022261101994,93.4979683526051,78.3251036660841,88.4657541100697,135.03105377157,112.300117318141,110.563277739556,97.163913021747,96.4157591861198,114.202258514513,111.675279117696,76.690637390021,152.919686563895,145.175209438338,148.307310147234,110.46327664057,100.97936518565,143.506374984283,125.671517363595,97.8619326548775,119.236011956667,55.5530848941161,87.908548430013,121.554531251445,82.6646707202772,124.104409789959,108.027702149439,90.6812397914744,64.3311923224873,52.2136661337365,34.4318997723918,99.4867300229015,115.70204997459
|phase1_expression=57.1731384164114,13.6100408979351,8.18998630901165,2.72217790176147,6.01074875935617,77.5602236232931,50.6939430092291,6.58528949552039,3.23814060948833,1.63845168425395,0,0.0797721589953364,4.96482116800497,4.54586092578786,650.563364825989,814.15305017449,1359.94829108112,54.417223524296,40.7229867809044,172.30219863,13.9470995847754,303.731019723508,208.176231943731,42.2379996174594,79.8344298113752,47.6612530215467,55.9990595006797,49.7738547504404,63.0877752595161,139.624691887002,189.801317120941,2825.88649689536,3741.43910287694,3946.19385728442,396.882125538251,550.23667613661,459.176882234068,572.132739217353,1139.96826766022,480.071273223973,356.468281746795,622.254436797144,358.792150890023,16.1147927008739,12.2666086775613,11.0128051297009,82.1510911565441,235.903219203643,18.4536393496956,18.6652703111312,91.6911061646124,73.3138078261355,69.9653467260761,19.5847778343063,12.0993767691287,60.9704863405194,32.0917452731408,13.4074743992135,68.1806473096844,78.2906649322609,70.3552857891859,77.2565533117621,77.3686472616691,39.5955875603816,39.554654502679,47.6021677013887,136.917250506911,139.471244831724,191.203645096833,320.774109476097,250.286704008145,58.8441027871835,74.874435382597,271.684592658768,421.72007248024,288.634698995547,6.60695285996332,1.27687338085188,1.0752457327937,41.1485217718205,34.399353994506,54.174990537903,1.95428099300967,4.50210088025344,2.13917546887534,66.5860603170489,47.6945130676995,28.7055146570963,6.20954785332109,72.6242692626209,11.0148505706638,3.44169550792555,0.679971333707751,1.07940638327563,0,0.448026887097336,57.72265667415,112.824873546674,205.750515645472,155.46941278455,66.7597809741466,21.815501160434,12.7402619853323,14.2213340630666,355.911271422436,275.148813905957,249.729075837303,42.5905871352094,22.0097201100096,1.92974780784272,352.695669315554,235.656280213597,163.506387554545,105.505848386836,52.7973295039315,29.028982597155,1.97755974187499,3.47038456607788,104.384045130085,134.428252306297,292.835853478482,417.962468202561,31.6865994070808,0.292780797011547,0.41889341362691,30.9103036802396,626.034025543433,905.253221069052,466.220663131074,0.149790639404823,1.37250180845588,33.0470946056833,1.39059456153821,1.53429274398198,0.83115217823824,2.27137768294861,144.81557539515,225.301023774878,2.27450482590307,2.31486041475121,330.896286454156,368.762975511291,223.457103088438,290.86029842293,182.950146217921,213.565571714845,216.638387182093,4.13925393182425,318.825061547674,178.516139678421,147.271090925225,197.276159184817,199.637924943979,76.9637288013988,125.732885345253,221.92320750262,367.257496964822,407.124389055479,392.713956164709,120.961451160733,234.995112101058,265.051354470614,104.641173128663,196.370703283909,212.580081558807,170.447381502049,140.5752623334,81.3854436299171,84.4192030056155,53.354425825706,9.56611952641098,8.77199924551994,20.8572609526498,20.2651692328161,0.420579897128254,35.810805107991,3.30418782983798,47.3366514327744,386.478309969844,272.181379420434,116.238450112528,74.8245876352601,75.6085349072559,70.5737072877594,73.5520045393993,44.4687177754829,76.1545682664817,81.771110008913,49.9108063024948,69.2090944663751,76.5128696556418,41.8196673834171,306.50332794018,395.528350654881,129.613896024043,211.390078303436,188.327865039765,83.0408107501372,41.546404890637,4.87113488332687,15.3858753284547,10.2419646055094,1.48226313543574,353.878469223836,345.550713409011,445.22698252201,487.067151453795,433.154178915341,554.320479328151,299.203982948843,258.119281025856,373.952644762167,109.263836960789,106.80445198086,48.989914678986,31.3197808654419,26.0126249606773,6.75420929908714,13.1174765018289,380.688246246904,151.068533161758,481.566808344209,379.963511979085,97.8236543460204,41.4195935141664,15.6106918286239,56.118111301804,95.8942106179195,32.3693180374699,12.2897486036803,22.1036776788346,22.4206040801343,4.52373851817817,8.15858525728064,30.4893849271802,12.6930903300177,0.963303539926752,1.05490517932983,153.607043817945,30.5489821917291,152.074961758636,131.968295572264,78.6295401724716,74.5582649611962,59.932843328164,65.1076020814315,84.6054366500529,53.4828219977701,44.6675189079572,0.963963949265421,12.3487874131194,198.365082485322,126.400280458375,12.3727592229402,0,404.472539834199,238.835610002153,160.880133031781,79.7315110778086,42.426050416262,57.1126527901769,76.3420831902762,101.245255461261,19.2782422340848,21.0837217149998,37.1287955693473,1.70219802876894,326.810885666828,245.781499187234,159.895428133568,64.5518450457876,106.664552926038,65.6550592202463,130.615463170163,39.659518662767,1.90648863777438,1.98475558249466,30.6688430471153,55.8666916367833,113.750176414502,147.186100155867,89.6209312608034,50.4261847369642,0.370850604021019,361.221042006661,312.469718096319,426.873385587185,1243.98529005898,723.932630010549,856.545480485221,186.806294563247,249.953293850053,252.491352140682,0,177.464492399017,115.078818393796,216.874724370177,161.207076227155,140.188765925046,130.548687300506,58.1053793749112,36.1223199937961,43.0321711328752,3.72803587852155,17.4744810992099,166.11288265486,310.565586587972,132.032356885608,279.631017829288,206.29542922424,149.865193750628,105.335347338756,51.2762194241726,41.310884661247,18.1458903942455,194.978861427586,453.496306604097,451.72278961091,638.430924112885,464.574275257114,344.910831900276,681.988980576303,583.964390448278,474.74424765619,586.868618050154,607.679417819738,519.255588581401,538.978736869126,325.50217257567,4.98806843953465,57.7163478772568,138.51819460503,53.8909618528692,1.54551675225752,12.5747258552292,9.89018771043231,15.8632600518509,1.50471631210609,4.51801474093653,3.68260189205742,4.01026859407578,6.8741272937475,0.685082519770642,2.2661816921691,2.70009000092722,2.2516060161211,0,0,539.797994785303,32.3210147454835,207.612064597027,159.234899679733,207.936257326958,164.356096554313,85.3427434758202,102.811493562208,70.6022261101994,93.4979683526051,78.3251036660841,88.4657541100697,135.03105377157,112.300117318141,110.563277739556,97.163913021747,96.4157591861198,114.202258514513,111.675279117696,76.690637390021,152.919686563895,145.175209438338,148.307310147234,110.46327664057,100.97936518565,143.506374984283,125.671517363595,97.8619326548775,119.236011956667,55.5530848941161,87.908548430013,121.554531251445,82.6646707202772,124.104409789959,108.027702149439,90.6812397914744,64.3311923224873,52.2136661337365,34.4318997723918,99.4867300229015,115.70204997459
|short_description=p6@Hist1h2ab,p6@Hist1h2ac,p6@Hist1h2ae,p6@Hist1h2ag,p6@Hist1h2ai,p6@Hist1h2an,p6@Hist1h2ao,p6@Hist1h2ap,p7@Hist1h2ad,p7@Hist1h2ah
|short_description=p6@Hist1h2ab,p6@Hist1h2ac,p6@Hist1h2ae,p6@Hist1h2ag,p6@Hist1h2ai,p6@Hist1h2an,p6@Hist1h2ao,p6@Hist1h2ap,p7@Hist1h2ad,p7@Hist1h2ah
}}
}}

Revision as of 02:01, 18 April 2012

Short description:p6@Hist1h2ab, p6@Hist1h2ac, p6@Hist1h2ae, p6@Hist1h2ag, p6@Hist1h2ai, p6@Hist1h2an, p6@Hist1h2ao, p6@Hist1h2ap, p7@Hist1h2ad, p7@Hist1h2ah
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Hist1h2ab_5end, CAGE_peak_6_at_Hist1h2ac_5end, CAGE_peak_6_at_Hist1h2ae_5end, CAGE_peak_6_at_Hist1h2ag_5end, CAGE_peak_6_at_Hist1h2ai_5end, CAGE_peak_6_at_Hist1h2an_5end, CAGE_peak_6_at_Hist1h2ao_5end, CAGE_peak_6_at_Hist1h2ap_5end, CAGE_peak_7_at_Hist1h2ad_5end, CAGE_peak_7_at_Hist1h2ah_5end
Coexpression cluster:NA
Association with transcript: -23bp_to_ENSMUST00000091751, NM_178184, uc007prk.1_5end
EntrezGene:319164,319165,319166,319167,319168,319170,319171,319172,319191,665433
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Hist1h2abp6@Hist1h2acp6@Hist1h2aep6@Hist1h2agp6@Hist1h2aip6@Hist1h2anp6@Hist1h2aop6@Hist1h2app7@Hist1h2adp7@Hist1h2ah

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G757.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I777.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I850.69
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1650.56
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3814.15
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51359.95
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A254.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A440.72
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6172.30
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2303.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9208.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D142.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D279.83
GP2+ M cell, pool1.CNhs13228.11845-124H947.66
GP2+ M cell, pool2.CNhs13231.11846-124I156.00
GP2+ M cell, pool3.CNhs13240.11847-124I249.77
Ileum epithelium, pool1.CNhs13199.10252-104B963.09
Ileum epithelium, pool2.CNhs13232.10253-104C1139.62
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8189.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32825.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63741.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E93946.19
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5396.88
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6550.24
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7459.18
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8572.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11139.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3480.07
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9356.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2622.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4358.79
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B782.15
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2235.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.45
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C491.69
Mouse Astrocytes, donor3.CNhs12107.11633-122C473.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A269.97
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I919.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.10
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C160.97
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E132.09
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C368.18
Mouse Granule cells, donor2.CNhs12357.11731-123E378.29
Mouse Granule cells, donor3.CNhs12108.11636-122C770.36
Mouse Meningeal cells, donor1.CNhs12132.11716-123C677.26
Mouse Meningeal cells, donor3.CNhs12109.11639-122D177.37
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C739.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E739.55
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D247.60
Mouse Microglia, donor1.CNhs12629.11718-123C8136.92
Mouse Microglia, donor2.CNhs12634.11736-123E8139.47
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5191.20
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5320.77
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9250.29
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F158.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D574.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2271.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2421.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6288.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D441.15
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F434.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D854.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D666.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F647.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.71
Mouse Schwann, donor1.CNhs12507.11728-123D96.21
Mouse Schwann, donor2.CNhs12573.11746-123F972.62
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A757.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7112.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3205.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8155.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G666.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1355.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2275.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3249.73
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B642.59
accessory axillary lymph node, adult.CNhs10475.1063-29H922.01
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C5352.70
adrenal gland, embryo E16.CNhs11004.1254-43D6235.66
adrenal gland, embryo E17.CNhs11043.1263-45I1163.51
adrenal gland, embryo E18.CNhs11026.1262-18F5105.51
adrenal gland, neonate N00.CNhs11191.1311-23C152.80
adrenal gland, neonate N25.CNhs11223.1377-27I329.03
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G2104.38
bone (os femoris), neonate N02.CNhs11227.1985-43F5134.43
bone (os femoris), neonate N16.CNhs11225.1525-43A6292.84
bone (os femoris), neonate N20.CNhs11195.1350-25C3417.96
cecum, adult.CNhs10467.37-13H431.69
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H730.91
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7626.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1905.25
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4466.22
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F133.05
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1144.82
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2225.30
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C6330.90
eyeball, embryo E14.CNhs10521.399-16E2368.76
eyeball, embryo E15.CNhs10593.426-16C9223.46
eyeball, embryo E17.CNhs11023.1261-18D4290.86
eyeball, neonate N00.CNhs11207.633-15C6182.95
eyeball, neonate N01.CNhs11140.1532-43E7213.57
eyeball, neonate N02.CNhs11205.1551-44G8216.64
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E2318.83
forelimb, embryo E12.CNhs10600.359-14H2178.52
forelimb, embryo E13.CNhs10589.384-1E2147.27
forelimb, embryo E14.CNhs10577.413-26A8197.28
forelimb, embryo E15.CNhs11007.437-20E7199.64
forelimb, embryo E17.CNhs10598.1517-43C476.96
forelimb, embryo E18.CNhs11008.1520-43B5125.73
gonad, embryo E13.CNhs11044.1564-45I6221.92
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8367.26
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2407.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5392.71
heart, embryo E11.CNhs10586.331-24E9120.96
heart, embryo E12.CNhs11015.353-12F5235.00
heart, embryo E13.CNhs11013.376-3I9265.05
heart, embryo E14.CNhs10597.403-26D4104.64
heart, embryo E15.CNhs11017.431-16C8196.37
heart, embryo E16.CNhs11021.457-17C6212.58
heart, embryo E17.CNhs11025.479-18E5170.45
heart, embryo E18.CNhs11030.1283-20G3140.58
heart, neonate N00.CNhs11213.639-21E381.39
heart, neonate N03.CNhs11221.1349-25I284.42
heart, neonate N10.CNhs11118.749-24G153.35
heart, neonate N16.CNhs11209.782-15G19.57
heart, neonate N20.CNhs11127.821-26I68.77
heart, neonate N25.CNhs11196.1351-25D320.86
heart, neonate N30.CNhs11202.1390-42D220.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G135.81
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A347.34
intestine, embryo E12.CNhs11019.1251-16I5386.48
intestine, embryo E13.CNhs11010.381-16D5272.18
intestine, embryo E15.CNhs10602.976-16D8116.24
intestine, embryo E16.CNhs10585.463-22H474.82
intestine, embryo E17.CNhs10582.482-18D375.61
intestine, embryo E18.CNhs10526.1289-20F770.57
intestine, neonate N00.CNhs11126.644-26D173.55
intestine, neonate N01.CNhs11192.1322-23E944.47
intestine, neonate N06.CNhs11102.688-20B876.15
intestine, neonate N07.CNhs11095.720-20F281.77
intestine, neonate N10.CNhs11098.755-23A549.91
intestine, neonate N20.CNhs11187.827-18D169.21
intestine, neonate N25.CNhs11121.1352-25E376.51
intestine, neonate N30.CNhs11131.1384-42G141.82
kidney, embryo E14.CNhs10606.411-4I9306.50
kidney, embryo E15.CNhs10997.434-16F8395.53
kidney, embryo E16.CNhs10584.464-22A5129.61
kidney, embryo E17.CNhs11028.483-18I2211.39
kidney, embryo E18.CNhs11001.1288-20C7188.33
kidney, neonate N00.CNhs11214.646-21G783.04
kidney, neonate N10.CNhs11206.758-6D541.55
kidney, neonate N20.CNhs11113.832-19I14.87
kidney, neonate N25.CNhs11122.1353-25F315.39
kidney, neonate N30.CNhs11203.1385-42H110.24
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F8353.88
liver, embryo E13.CNhs10524.378-3H6345.55
liver, embryo E14.CNhs10594.409-16E1445.23
liver, embryo E15.CNhs10520.433-16D7487.07
liver, embryo E16.CNhs10523.462-17F5433.15
liver, embryo E17.CNhs10510.481-18A3554.32
liver, embryo E18.CNhs10579.499-43G4299.20
liver, neonate N00.CNhs11117.641-24F4258.12
liver, neonate N03.CNhs11123.1345-25G2373.95
liver, neonate N06.CNhs11101.684-20A8109.26
liver, neonate N07.CNhs11103.716-20H2106.80
liver, neonate N10.CNhs11115.751-24B948.99
liver, neonate N20.CNhs11220.823-25A331.32
liver, neonate N25.CNhs11198.1368-26H126.01
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B113.12
lung, embryo E12.CNhs10522.354-16G2380.69
lung, embryo E14.CNhs10604.404-26F8151.07
lung, embryo E15.CNhs11020.432-17C5481.57
lung, embryo E16.CNhs10998.458-17B6379.96
lung, embryo E17.CNhs10605.480-44A697.82
lung, embryo E18.CNhs10583.1287-20I641.42
lung, neonate N00.CNhs11224.640-42C615.61
lung, neonate N06.CNhs11212.683-20E556.12
lung, neonate N07.CNhs11111.715-19A395.89
lung, neonate N10.CNhs11219.750-23E632.37
lung, neonate N20.CNhs11109.822-18A412.29
lung, neonate N25.CNhs11119.1359-25C722.10
lung, neonate N30.CNhs11133.1394-42H222.42
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B630.49
mammary gland, adult pregnant day19.CNhs10476.588-5H212.69
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7153.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C230.55
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1152.07
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2131.97
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E378.63
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D774.56
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D859.93
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D965.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D484.61
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D553.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D644.67
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I712.35
ovary, embryo E18.CNhs11040.505-44H7198.37
ovary, neonate N00.CNhs11217.1299-22I4126.40
oviduct, adult pregnant day01.CNhs10500.988-6G612.37
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F4404.47
pancreas, embryo E15.CNhs11042.1556-45F2238.84
pancreas, embryo E16.CNhs11003.460-26E5160.88
pancreas, embryo E17.CNhs10599.1558-45G379.73
pancreas, embryo E18.CNhs10580.1535-43I742.43
pancreas, neonate N00.CNhs11105.645-26G957.11
pancreas, neonate N01.CNhs11138.1531-43D776.34
pancreas, neonate N02.CNhs11139.1539-43D8101.25
pancreas, neonate N16.CNhs11136.787-43B619.28
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H537.13
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E6326.81
pituitary gland, embryo E13.CNhs11009.370-44C7245.78
pituitary gland, embryo E14.CNhs11037.398-44A5159.90
pituitary gland, embryo E15.CNhs10592.427-16B964.55
pituitary gland, embryo E16.CNhs11036.449-43F6106.66
pituitary gland, embryo E17.CNhs11039.1265-44F565.66
pituitary gland, neonate N00.CNhs11190.1308-22E9130.62
placenta, adult pregnant day10.CNhs10472.539-13I739.66
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C330.67
skin, neonate N00.CNhs11124.650-25G455.87
skin, neonate N03.CNhs11215.662-22H3113.75
skin, neonate N06.CNhs11097.693-20I5147.19
skin, neonate N10.CNhs11108.762-6C489.62
small intestine, neonate N16.CNhs11114.790-21I150.43
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G2361.22
spleen, embryo E16.CNhs11035.461-43C1312.47
spleen, embryo E18.CNhs11011.1271-21F2426.87
spleen, neonate N10.CNhs11116.752-24D11243.99
spleen, neonate N20.CNhs11112.824-19H1723.93
spleen, neonate N25.CNhs11099.1354-25G3856.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6186.81
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9249.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3252.49
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E3177.46
stomach, embryo E15.CNhs10603.1252-16G8115.08
stomach, embryo E16.CNhs11022.459-17D4216.87
stomach, embryo E17.CNhs11006.1035-18D5161.21
stomach, embryo E18.CNhs10999.1286-20C6140.19
stomach, neonate N03.CNhs11193.1340-24B8130.55
stomach, neonate N07.CNhs11210.718-18A958.11
stomach, neonate N25.CNhs11104.1355-25E436.12
stomach, neonate N30.CNhs11134.1386-42I143.03
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F5166.11
testis, embryo E15.CNhs11034.443-27C5310.57
testis, embryo E16.CNhs11033.470-26G5132.03
testis, embryo E17.CNhs11029.486-18I5279.63
testis, embryo E18.CNhs11027.503-18G5206.30
testis, neonate N00.CNhs11189.1300-22B7149.87
testis, neonate N07.CNhs11222.726-26I4105.34
testis, neonate N10.CNhs11204.763-44D951.28
testis, neonate N20.CNhs11110.839-18H341.31
testis, neonate N30.CNhs11130.1391-42E218.15
thymus, adult.CNhs10471.38-12B5194.98
thymus, embryo E14.CNhs11041.402-44I4453.50
thymus, embryo E15.CNhs11005.430-45I2451.72
thymus, embryo E16.CNhs11002.456-26C5638.43
thymus, embryo E17.CNhs10581.478-18C1464.57
thymus, embryo E18.CNhs10595.1273-19G4344.91
thymus, neonate N02.CNhs11181.1541-43F8681.99
thymus, neonate N03.CNhs11137.2104-43C7583.96
thymus, neonate N06.CNhs11197.681-26C4474.74
thymus, neonate N07.CNhs11211.713-19D3586.87
thymus, neonate N10.CNhs11194.748-24E4607.68
thymus, neonate N20.CNhs11186.820-7A2519.26
thymus, neonate N25.CNhs11125.1362-25G7538.98
thymus, neonate N30.CNhs11132.1393-42G2325.50
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H357.72
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7138.52
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G553.89
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F512.57
uterus, adult.CNhs10509.92-27E59.89
vagina, adult.CNhs10502.89-27D515.86
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I8539.80
whole body, embryo E12.CNhs10587.857-27C932.32
whole body, embryo E13.CNhs10512.372-23H2207.61
whole body, embryo E14.5.CNhs10578.420-27D2159.23
whole body, embryo E14.CNhs10519.395-14B1207.94
whole body, embryo E16.CNhs10514.453-14F2164.36
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G585.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5102.81
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G570.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G593.50
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G578.33
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G588.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5135.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5112.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5110.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G597.16
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G596.42
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5114.20
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5111.68
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G576.69
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5152.92
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5145.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5148.31
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5110.46
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5100.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5143.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5125.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G597.86
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5119.24
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G555.55
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G587.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5121.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G582.66
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5124.10
whole body, embryo E17.5.CNhs10513.490-9F9108.03
whole body, embryo E17.CNhs10517.475-3I590.68
whole body, embryo E18.CNhs10516.493-3B364.33
whole body, neonate N00.CNhs10525.657-19C252.21
whole body, neonate N01.CNhs10576.659-23C634.43
whole body, neonate N06.CNhs10515.692-21D199.49
whole body, neonate N10.CNhs10518.761-6B4115.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:21879110..21879125,-&oldid=802197"