Personal tools

FFCP PHASE1:Mm9::chr17:36116182..36116253,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:36116182..36116253,-
|short_description=p1@Prr3
|description=CAGE_peak_1_at_Prr3_5end
|association_with_transcript=0bp_to_ENSMUST00000173417_5end
|EntrezGene=75210
|EntrezGene=75210
|HGNC=
|HGNC=
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000173417_5end
|description=CAGE_peak_1_at_Prr3_5end
|id=chr17:36116182..36116253,-
|ontology_enrichment_disease=
|phase1_expression=16.6554800988986,0.348975407639361,0.454999239389536,0.30246421130683,0,2.51818907867835,2.56973904655078,6.32704284863724,14.36044965947,12.4054198950657,8.04724450659873,10.1310641924077,8.21763503669787,6.7313709862628,3.33109761815663,3.64455481301687,1.39912375625629,6.78243655520211,6.7186072466812,4.66828616977833,8.50432901510698,13.7021512657222,10.9703911438353,3.03985603307473,2.52350209173887,0.57423196411502,1.7230479846363,2.58565479223067,0.570070258369122,0.252030129759931,2.43903561720835,17.7808588568697,14.7615549020297,0,2.02196133825892,2.65975432573588,3.26670970019791,1.25559489221072,1.5626706890476,1.0470474879476,0,0,0.485510353031154,11.2048167998264,9.63080846585388,9.9115246167308,25.0365230191373,16.5699118849139,10.9843091367236,11.0825042472342,7.13930750289349,10.062679505548,6.87908684836719,6.5282592781021,6.38578218370682,6.17422646486273,6.5902691185914,4.64104883049698,47.5443683020055,51.8411159686592,50.0726808769882,5.42151251310611,10.6715375533337,8.54904731417329,5.93319817540185,7.8152812644071,18.5752068521411,23.8215349299364,29.0330914463737,34.8315320895762,31.7590691640587,46.56111045782,33.7928867655969,30.9901722013834,36.3254335159116,25.7381260250806,14.3150645299205,15.0671058940522,23.8090126547177,53.4139465307285,56.9053143206988,44.7985498678814,18.1468949350898,16.8828783009504,19.7109739632085,39.1856018679978,38.4403538157578,41.0078780815661,7.19398836665249,6.04572480854284,4.92769630792852,6.0229671388697,6.11974200336975,2.15881276655127,3.89865850468601,5.37632264516803,5.19644354487482,5.62420064507591,4.41636207824877,3.18005617059306,21.6898866456088,3.84979432242953,2.54805239706646,7.11066703153331,2.38140145112336,1.26679932737549,3.0331466700887,6.8510327831436,8.54495016035667,9.79718117827843,14.052311468057,12.7875500891099,10.3776973765226,10.8520301197888,15.9920641704559,8.54532821041793,6.92145909656247,6.36237170447611,1.76922110389975,7.117741397686,5.74187947997023,4.84875253135222,1.86391761218122,15.2246014446005,18.0124167859571,3.0654846625031,6.82946209683746,5.99902730993408,10.1656181658452,24.1162929441765,18.7575247155637,43.0994427747125,19.468323861535,26.0829766476937,21.8177446787538,23.0382593556216,14.7667077582959,9.70374370758726,11.625246887949,4.20883711772948,22.2505957466223,20.921091503446,16.5657159420921,16.1254155084215,19.1182562615231,21.2668775672851,20.5206776785806,12.1590584247337,27.8082710883366,25.5293208226556,22.8736461413134,16.4396799320681,18.9072129473407,10.447564995665,10.2891068203972,12.9372273432021,4.21327912387941,6.94839349209731,8.24074148247219,10.7705401718461,11.7263029990548,8.64297895012871,11.6004920436753,9.05115466038058,8.33042409591843,7.67362017676346,4.82892122519315,7.23945122676451,5.10135534731789,5.58169377868924,3.64809642956351,4.5321996101853,3.29325172936576,3.75777972529041,22.2907345477975,51.5552108020215,0,1.85115396664481,15.1434657880016,15.7920936865098,12.5001437482431,9.4791256572971,7.33847544688072,5.1360919050391,3.79623249235609,6.0938613247884,5.27803938480566,5.37182474511107,2.72949721966768,0,1.72910439899755,2.58883655230677,19.1564579962612,14.1668155636064,15.7790829942313,17.1067115390064,14.7403890247396,11.3620028222316,11.7619959051119,9.59465961867414,9.89091985400661,9.37818445805684,7.11486305009157,7.67487486294033,7.07612382407531,5.39669069723649,5.68008339887808,3.85883455603867,4.07401362850272,8.0554918486227,9.56597837972709,3.84385978463314,5.75072826109418,6.32639611036456,8.11297950097858,4.79899868099512,4.66433275156972,7.23665282045051,6.28160846566456,14.7803301180978,15.9705676913185,13.2401166904647,13.1426539041561,9.21284415929987,8.80761471278251,9.36641509717434,9.30047350226527,10.6303051031412,10.3645599627367,9.34020893879707,6.56202931090403,6.50920763616802,4.52373851817817,7.07077388964322,0,3.31124095565679,15.7339578188036,23.9111840648094,8.0328123234571,4.54447668967871,17.9839685067266,14.4462335389756,22.8348801596767,15.7719406648684,17.3782965784267,16.7015153165411,17.4068601720205,14.6127928955656,17.392662229647,30.5255250600717,13.200427924369,20.1214132143998,15.4742611385897,9.07335676348945,5.30980553359851,16.9946445308487,9.67435382287203,7.54420319023592,9.44966057218473,7.07100840271033,8.78656196771952,9.81541069589265,7.12994756769443,6.32073515871632,4.21674434299995,7.21948802737308,22.1285743739962,21.4272701897259,27.424040961944,21.8623775732224,24.8276327099183,26.5769538227085,22.8723138636948,39.2759784357833,7.27482294997502,12.2862601101016,3.30792597082443,4.28704257647848,8.23468576149118,5.72972786817481,4.65552141612232,4.59594519286172,2.04036585640896,18.7279555030615,5.80960994712699,8.87463532241857,9.4449208958553,4.1441060541032,5.33107488111998,3.88922894451088,6.4591803397665,8.6769900440668,8.153798454461,2.86401185404534,17.3984796469624,10.775931757723,8.7484326065659,7.52717865652087,5.67742665740062,5.66430254816247,5.62043498932284,1.30877970992015,2.85152941241944,2.4853572523477,11.2738587736838,20.6332833540691,18.5313509311949,19.0562164577167,16.5324574051496,16.726656423587,20.1854450470697,16.4057524903377,18.5601039633508,12.0792060413003,9.21696020025169,9.79634473947353,13.582589424441,14.8930887889,15.200736288402,8.23522800070415,10.3314304486258,9.2550496130376,8.71368210330006,7.37055084621478,7.08723301891499,8.87270429204197,10.4279932391535,7.21588812302471,11.103305707249,3.17422537061296,6.65957860122194,8.79195794772862,9.73730774911655,6.37525660306228,5.2551093126331,6.41030684935428,3.64426244434412,3.00943262421218,29.3670958160875,31.7624413189952,30.363462212288,31.1054260042075,19.182310553578,14.3524840504043,18.9006300064906,16.2115633160719,19.0319811773366,23.8169743405837,25.5316875057075,21.5473431636557,19.4636310559713,16.0450433265074,22.2189952385661,19.6712554041515,15.1127774905098,16.0707344646337,15.7250412699989,13.8983466470089,15.2087579934144,15.6559863350443,11.9861129561449,15.4940868819784,14.3014317699477,16.1939855036245,12.6313915279892,13.6965546529231,7.41754621445952,13.8366984926333,15.4291163573437,13.3106854619503,13.5908628269973,14.9706809131298,14.2105164427149,12.8614203995348,14.8171658026946,11.0489278803894,13.4446072707403,15.7119836064167,13.4057570480317,13.1996006383255,11.867700251921,13.789378865551,13.8892759906422,30.4768905084294,12.8662384644975,10.5286816483666,13.7727599089567,9.26483960301965,8.11537424671475
|phase1_expression=16.6554800988986,0.348975407639361,0.454999239389536,0.30246421130683,0,2.51818907867835,2.56973904655078,6.32704284863724,14.36044965947,12.4054198950657,8.04724450659873,10.1310641924077,8.21763503669787,6.7313709862628,3.33109761815663,3.64455481301687,1.39912375625629,6.78243655520211,6.7186072466812,4.66828616977833,8.50432901510698,13.7021512657222,10.9703911438353,3.03985603307473,2.52350209173887,0.57423196411502,1.7230479846363,2.58565479223067,0.570070258369122,0.252030129759931,2.43903561720835,17.7808588568697,14.7615549020297,0,2.02196133825892,2.65975432573588,3.26670970019791,1.25559489221072,1.5626706890476,1.0470474879476,0,0,0.485510353031154,11.2048167998264,9.63080846585388,9.9115246167308,25.0365230191373,16.5699118849139,10.9843091367236,11.0825042472342,7.13930750289349,10.062679505548,6.87908684836719,6.5282592781021,6.38578218370682,6.17422646486273,6.5902691185914,4.64104883049698,47.5443683020055,51.8411159686592,50.0726808769882,5.42151251310611,10.6715375533337,8.54904731417329,5.93319817540185,7.8152812644071,18.5752068521411,23.8215349299364,29.0330914463737,34.8315320895762,31.7590691640587,46.56111045782,33.7928867655969,30.9901722013834,36.3254335159116,25.7381260250806,14.3150645299205,15.0671058940522,23.8090126547177,53.4139465307285,56.9053143206988,44.7985498678814,18.1468949350898,16.8828783009504,19.7109739632085,39.1856018679978,38.4403538157578,41.0078780815661,7.19398836665249,6.04572480854284,4.92769630792852,6.0229671388697,6.11974200336975,2.15881276655127,3.89865850468601,5.37632264516803,5.19644354487482,5.62420064507591,4.41636207824877,3.18005617059306,21.6898866456088,3.84979432242953,2.54805239706646,7.11066703153331,2.38140145112336,1.26679932737549,3.0331466700887,6.8510327831436,8.54495016035667,9.79718117827843,14.052311468057,12.7875500891099,10.3776973765226,10.8520301197888,15.9920641704559,8.54532821041793,6.92145909656247,6.36237170447611,1.76922110389975,7.117741397686,5.74187947997023,4.84875253135222,1.86391761218122,15.2246014446005,18.0124167859571,3.0654846625031,6.82946209683746,5.99902730993408,10.1656181658452,24.1162929441765,18.7575247155637,43.0994427747125,19.468323861535,26.0829766476937,21.8177446787538,23.0382593556216,14.7667077582959,9.70374370758726,11.625246887949,4.20883711772948,22.2505957466223,20.921091503446,16.5657159420921,16.1254155084215,19.1182562615231,21.2668775672851,20.5206776785806,12.1590584247337,27.8082710883366,25.5293208226556,22.8736461413134,16.4396799320681,18.9072129473407,10.447564995665,10.2891068203972,12.9372273432021,4.21327912387941,6.94839349209731,8.24074148247219,10.7705401718461,11.7263029990548,8.64297895012871,11.6004920436753,9.05115466038058,8.33042409591843,7.67362017676346,4.82892122519315,7.23945122676451,5.10135534731789,5.58169377868924,3.64809642956351,4.5321996101853,3.29325172936576,3.75777972529041,22.2907345477975,51.5552108020215,0,1.85115396664481,15.1434657880016,15.7920936865098,12.5001437482431,9.4791256572971,7.33847544688072,5.1360919050391,3.79623249235609,6.0938613247884,5.27803938480566,5.37182474511107,2.72949721966768,0,1.72910439899755,2.58883655230677,19.1564579962612,14.1668155636064,15.7790829942313,17.1067115390064,14.7403890247396,11.3620028222316,11.7619959051119,9.59465961867414,9.89091985400661,9.37818445805684,7.11486305009157,7.67487486294033,7.07612382407531,5.39669069723649,5.68008339887808,3.85883455603867,4.07401362850272,8.0554918486227,9.56597837972709,3.84385978463314,5.75072826109418,6.32639611036456,8.11297950097858,4.79899868099512,4.66433275156972,7.23665282045051,6.28160846566456,14.7803301180978,15.9705676913185,13.2401166904647,13.1426539041561,9.21284415929987,8.80761471278251,9.36641509717434,9.30047350226527,10.6303051031412,10.3645599627367,9.34020893879707,6.56202931090403,6.50920763616802,4.52373851817817,7.07077388964322,0,3.31124095565679,15.7339578188036,23.9111840648094,8.0328123234571,4.54447668967871,17.9839685067266,14.4462335389756,22.8348801596767,15.7719406648684,17.3782965784267,16.7015153165411,17.4068601720205,14.6127928955656,17.392662229647,30.5255250600717,13.200427924369,20.1214132143998,15.4742611385897,9.07335676348945,5.30980553359851,16.9946445308487,9.67435382287203,7.54420319023592,9.44966057218473,7.07100840271033,8.78656196771952,9.81541069589265,7.12994756769443,6.32073515871632,4.21674434299995,7.21948802737308,22.1285743739962,21.4272701897259,27.424040961944,21.8623775732224,24.8276327099183,26.5769538227085,22.8723138636948,39.2759784357833,7.27482294997502,12.2862601101016,3.30792597082443,4.28704257647848,8.23468576149118,5.72972786817481,4.65552141612232,4.59594519286172,2.04036585640896,18.7279555030615,5.80960994712699,8.87463532241857,9.4449208958553,4.1441060541032,5.33107488111998,3.88922894451088,6.4591803397665,8.6769900440668,8.153798454461,2.86401185404534,17.3984796469624,10.775931757723,8.7484326065659,7.52717865652087,5.67742665740062,5.66430254816247,5.62043498932284,1.30877970992015,2.85152941241944,2.4853572523477,11.2738587736838,20.6332833540691,18.5313509311949,19.0562164577167,16.5324574051496,16.726656423587,20.1854450470697,16.4057524903377,18.5601039633508,12.0792060413003,9.21696020025169,9.79634473947353,13.582589424441,14.8930887889,15.200736288402,8.23522800070415,10.3314304486258,9.2550496130376,8.71368210330006,7.37055084621478,7.08723301891499,8.87270429204197,10.4279932391535,7.21588812302471,11.103305707249,3.17422537061296,6.65957860122194,8.79195794772862,9.73730774911655,6.37525660306228,5.2551093126331,6.41030684935428,3.64426244434412,3.00943262421218,29.3670958160875,31.7624413189952,30.363462212288,31.1054260042075,19.182310553578,14.3524840504043,18.9006300064906,16.2115633160719,19.0319811773366,23.8169743405837,25.5316875057075,21.5473431636557,19.4636310559713,16.0450433265074,22.2189952385661,19.6712554041515,15.1127774905098,16.0707344646337,15.7250412699989,13.8983466470089,15.2087579934144,15.6559863350443,11.9861129561449,15.4940868819784,14.3014317699477,16.1939855036245,12.6313915279892,13.6965546529231,7.41754621445952,13.8366984926333,15.4291163573437,13.3106854619503,13.5908628269973,14.9706809131298,14.2105164427149,12.8614203995348,14.8171658026946,11.0489278803894,13.4446072707403,15.7119836064167,13.4057570480317,13.1996006383255,11.867700251921,13.789378865551,13.8892759906422,30.4768905084294,12.8662384644975,10.5286816483666,13.7727599089567,9.26483960301965,8.11537424671475
|short_description=p1@Prr3
}}
}}

Revision as of 02:02, 18 April 2012

Short description:p1@Prr3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Prr3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000173417_5end
EntrezGene:Prr3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Prr3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F212.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.13
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.22
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.72
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H213.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.97
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.78
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.63
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.91
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B725.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C216.57
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.88
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C347.54
Mouse Granule cells, donor2.CNhs12357.11731-123E351.84
Mouse Granule cells, donor3.CNhs12108.11636-122C750.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C818.58
Mouse Microglia, donor2.CNhs12634.11736-123E823.82
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D529.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F534.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D931.76
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F146.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D533.79
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.99
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F236.33
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D453.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F456.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D844.80
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D639.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F638.44
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E141.01
Mouse Schwann, donor1.CNhs12507.11728-123D97.19
Mouse Schwann, donor2.CNhs12573.11746-123F96.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.85
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D79.80
adrenal gland, embryo E14.CNhs11038.406-44C514.05
adrenal gland, embryo E16.CNhs11004.1254-43D612.79
adrenal gland, embryo E17.CNhs11043.1263-45I110.38
adrenal gland, embryo E18.CNhs11026.1262-18F510.85
adrenal gland, neonate N00.CNhs11191.1311-23C115.99
adrenal gland, neonate N25.CNhs11223.1377-27I38.55
amnion, adult pregnant day17.5.CNhs10488.583-22A86.92
aorta, adult.CNhs10498.46-23H16.36
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F57.12
bone (os femoris), neonate N16.CNhs11225.1525-43A65.74
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I218.01
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.17
corpora quadrigemina, adult.CNhs10501.16-22A424.12
corpus striatum, adult.CNhs10487.19-21D818.76
corpus striatum, neonate N00.CNhs11226.630-43F143.10
cortex, adult.CNhs10473.12-14D519.47
cortex, neonate N30.CNhs11107.1392-42F226.08
diencephalon, adult.CNhs10482.20-12F221.82
diencephalon, neonate N30.CNhs11201.1388-42B223.04
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.70
epididymis, adult.CNhs10490.58-23B211.63
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C622.25
eyeball, embryo E14.CNhs10521.399-16E220.92
eyeball, embryo E15.CNhs10593.426-16C916.57
eyeball, embryo E17.CNhs11023.1261-18D416.13
eyeball, neonate N00.CNhs11207.633-15C619.12
eyeball, neonate N01.CNhs11140.1532-43E721.27
eyeball, neonate N02.CNhs11205.1551-44G820.52
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E227.81
forelimb, embryo E12.CNhs10600.359-14H225.53
forelimb, embryo E13.CNhs10589.384-1E222.87
forelimb, embryo E14.CNhs10577.413-26A816.44
forelimb, embryo E15.CNhs11007.437-20E718.91
forelimb, embryo E17.CNhs10598.1517-43C410.45
forelimb, embryo E18.CNhs11008.1520-43B510.29
gonad, embryo E13.CNhs11044.1564-45I612.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.24
heart, embryo E11.CNhs10586.331-24E910.77
heart, embryo E12.CNhs11015.353-12F511.73
heart, embryo E13.CNhs11013.376-3I98.64
heart, embryo E14.CNhs10597.403-26D411.60
heart, embryo E15.CNhs11017.431-16C89.05
heart, embryo E16.CNhs11021.457-17C68.33
heart, embryo E17.CNhs11025.479-18E57.67
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E37.24
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G15.58
heart, neonate N16.CNhs11209.782-15G13.65
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D23.76
hippocampus, adult.CNhs10478.13-16E822.29
hippocampus, neonate N00.CNhs11228.627-43G151.56
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I515.14
intestine, embryo E13.CNhs11010.381-16D515.79
intestine, embryo E15.CNhs10602.976-16D812.50
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E96.09
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I919.16
kidney, embryo E15.CNhs10997.434-16F814.17
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I217.11
kidney, embryo E18.CNhs11001.1288-20C714.74
kidney, neonate N00.CNhs11214.646-21G711.36
kidney, neonate N10.CNhs11206.758-6D511.76
kidney, neonate N20.CNhs11113.832-19I19.59
kidney, neonate N25.CNhs11122.1353-25F39.89
kidney, neonate N30.CNhs11203.1385-42H19.38
liver, adult pregnant day01.CNhs10466.508-5B27.11
liver, embryo E12.CNhs10601.355-15F87.67
liver, embryo E13.CNhs10524.378-3H67.08
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F49.57
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B98.11
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H14.66
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G214.78
lung, embryo E14.CNhs10604.404-26F815.97
lung, embryo E15.CNhs11020.432-17C513.24
lung, embryo E16.CNhs10998.458-17B613.14
lung, embryo E17.CNhs10605.480-44A69.21
lung, embryo E18.CNhs10583.1287-20I68.81
lung, neonate N00.CNhs11224.640-42C69.37
lung, neonate N06.CNhs11212.683-20E59.30
lung, neonate N07.CNhs11111.715-19A310.63
lung, neonate N10.CNhs11219.750-23E610.36
lung, neonate N20.CNhs11109.822-18A49.34
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C215.73
medulla oblongata, neonate N30.CNhs11200.1396-42A323.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.03
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.98
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.45
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.77
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.41
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.39
olfactory brain, adult.CNhs10489.18-22I930.53
ovary, adult.CNhs10507.91-2I713.20
ovary, embryo E18.CNhs11040.505-44H720.12
ovary, neonate N00.CNhs11217.1299-22I415.47
oviduct, adult pregnant day01.CNhs10500.988-6G69.07
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F416.99
pancreas, embryo E15.CNhs11042.1556-45F29.67
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G822.13
pituitary gland, embryo E12.CNhs11018.346-16E621.43
pituitary gland, embryo E13.CNhs11009.370-44C727.42
pituitary gland, embryo E14.CNhs11037.398-44A521.86
pituitary gland, embryo E15.CNhs10592.427-16B924.83
pituitary gland, embryo E16.CNhs11036.449-43F626.58
pituitary gland, embryo E17.CNhs11039.1265-44F522.87
pituitary gland, neonate N00.CNhs11190.1308-22E939.28
placenta, adult pregnant day10.CNhs10472.539-13I77.27
placenta, adult pregnant day17.CNhs10464.577-18G312.29
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G48.23
skin, neonate N03.CNhs11215.662-22H35.73
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C918.73
spleen, adult.CNhs10465.25-2G25.81
spleen, embryo E16.CNhs11035.461-43C18.87
spleen, embryo E18.CNhs11011.1271-21F29.44
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.15
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E317.40
stomach, embryo E15.CNhs10603.1252-16G810.78
stomach, embryo E16.CNhs11022.459-17D48.75
stomach, embryo E17.CNhs11006.1035-18D57.53
stomach, embryo E18.CNhs10999.1286-20C65.68
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A95.62
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G511.27
testis, embryo E13.CNhs11031.389-23F520.63
testis, embryo E15.CNhs11034.443-27C518.53
testis, embryo E16.CNhs11033.470-26G519.06
testis, embryo E17.CNhs11029.486-18I516.53
testis, embryo E18.CNhs11027.503-18G516.73
testis, neonate N00.CNhs11189.1300-22B720.19
testis, neonate N07.CNhs11222.726-26I416.41
testis, neonate N10.CNhs11204.763-44D918.56
testis, neonate N20.CNhs11110.839-18H312.08
testis, neonate N30.CNhs11130.1391-42E29.22
thymus, adult.CNhs10471.38-12B59.80
thymus, embryo E14.CNhs11041.402-44I413.58
thymus, embryo E15.CNhs11005.430-45I214.89
thymus, embryo E16.CNhs11002.456-26C515.20
thymus, embryo E17.CNhs10581.478-18C18.24
thymus, embryo E18.CNhs10595.1273-19G410.33
thymus, neonate N02.CNhs11181.1541-43F89.26
thymus, neonate N03.CNhs11137.2104-43C78.71
thymus, neonate N06.CNhs11197.681-26C47.37
thymus, neonate N07.CNhs11211.713-19D37.09
thymus, neonate N10.CNhs11194.748-24E48.87
thymus, neonate N20.CNhs11186.820-7A210.43
thymus, neonate N25.CNhs11125.1362-25G77.22
thymus, neonate N30.CNhs11132.1393-42G211.10
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.74
urinary bladder, adult.CNhs10481.879-12E46.38
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.37
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.36
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.03
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.82
whole body, embryo E11.CNhs11014.324-5I825.53
whole body, embryo E12.CNhs10587.857-27C921.55
whole body, embryo E13.CNhs10512.372-23H219.46
whole body, embryo E14.5.CNhs10578.420-27D216.05
whole body, embryo E14.CNhs10519.395-14B122.22
whole body, embryo E16.CNhs10514.453-14F219.67
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.21
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.49
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.59
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.97
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.79
whole body, embryo E17.5.CNhs10513.490-9F913.89
whole body, embryo E17.CNhs10517.475-3I530.48
whole body, embryo E18.CNhs10516.493-3B312.87
whole body, neonate N00.CNhs10525.657-19C210.53
whole body, neonate N01.CNhs10576.659-23C613.77
whole body, neonate N06.CNhs10515.692-21D19.26
whole body, neonate N10.CNhs10518.761-6B48.12





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:36116182..36116253,-&oldid=802271"