FFCP PHASE1:Mm9::chr13:23775810..23775836,-: Difference between revisions
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|description=CAGE_peak_5_at_Hist1h2ab_5end,CAGE_peak_5_at_Hist1h2ac_5end,CAGE_peak_5_at_Hist1h2ae_5end,CAGE_peak_5_at_Hist1h2ag_5end,CAGE_peak_5_at_Hist1h2ai_5end,CAGE_peak_5_at_Hist1h2an_5end,CAGE_peak_5_at_Hist1h2ao_5end,CAGE_peak_5_at_Hist1h2ap_5end,CAGE_peak_6_at_Hist1h2ad_5end,CAGE_peak_6_at_Hist1h2ah_5end | |description=CAGE_peak_5_at_Hist1h2ab_5end,CAGE_peak_5_at_Hist1h2ac_5end,CAGE_peak_5_at_Hist1h2ae_5end,CAGE_peak_5_at_Hist1h2ag_5end,CAGE_peak_5_at_Hist1h2ai_5end,CAGE_peak_5_at_Hist1h2an_5end,CAGE_peak_5_at_Hist1h2ao_5end,CAGE_peak_5_at_Hist1h2ap_5end,CAGE_peak_6_at_Hist1h2ad_5end,CAGE_peak_6_at_Hist1h2ah_5end | ||
|id=chr13:23775810..23775836,- | |id=chr13:23775810..23775836,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|phase1_expression=113.065086055985,54.7891389993797,48.2299193752908,33.5735274550581,56.6012174839372,160.660463219679,131.757529295876,65.0781550145544,20.27357598984,7.72412936862578,10.9579499664323,4.86610169871552,100.323627739687,46.1579724772306,1654.88929670021,2700.6151164455,3665.70424139149,179.182509923479,179.208564722701,589.052836695666,43.5421645573477,892.625651295959,768.710979435887,120.314301940642,172.056960800378,125.182568177074,138.274600767063,117.862764279181,187.553115003441,261.355244561048,338.360759259995,3654.60152576018,2890.80450164748,5182.35096920485,957.543119475475,1563.9355435327,1230.73287954956,1551.07822351098,3044.08250226473,1293.10364761528,1494.10797959878,1969.90317862016,1169.10893009902,39.1539103904045,30.5144562970739,38.3612712017914,212.028054318319,308.941646591093,38.664768161267,31.4976436500339,138.026611722607,146.627615652271,229.358822480926,86.31809489935,72.9323544139147,102.389255542307,141.834052769685,72.7097650111194,153.558193792435,201.016572123372,161.627007894076,144.686615193519,138.729988193338,90.8898714454213,176.018212536921,115.097778621268,260.052895929975,224.767708613109,381.681462907506,619.137233189133,426.539021620603,97.1213346972932,104.912556952016,543.614166915966,716.540741332335,550.612053179403,13.2139057199266,7.53355294702608,13.3637683932932,102.475645566361,92.1280571076265,123.456468821952,20.3803589271008,14.6318278608237,11.6126668310376,127.868806095572,90.5483889882295,81.4565578256563,33.6224298399337,142.452390801291,117.684982412881,33.5565312022741,12.2394840067395,25.9057531986152,16.8941868536394,11.2006721774334,71.9075431074569,240.988476125374,395.134513000963,290.091790672989,189.293556179859,48.7640614174408,2.54805239706646,7.11066703153331,912.509737862267,677.484280280414,651.115485179041,79.5861641641848,58.778899587908,12.6175818205101,732.628534933392,609.235422102594,365.756178648109,256.379211580011,133.228005184754,58.9376313336178,36.5848552246873,12.2909453381925,394.536306169644,262.385830614698,670.254008527294,934.839488044708,154.705161811041,8.49064311333487,12.3573557019938,126.195785273044,3133.16550582982,4879.60881390038,2603.1606718188,6.89036941262184,12.3525162761029,95.6229619578898,11.298580812498,19.4343747571051,10.389402227978,22.064811777215,295.334155165917,500.240428823184,23.2504937758981,18.9397670297827,921.903338390756,1179.62769784815,550.449930814953,666.868818923039,355.08248907078,537.693284035515,489.872615998262,35.7010651619842,794.368053957524,475.601791622065,343.456594368028,442.556183771274,521.06054504877,163.330266098896,230.475992776897,596.107629121387,2553.24714907092,2488.03956598507,2107.64067501711,250.000807450351,480.074844781304,388.934052755792,177.321806953322,324.464218151469,326.892012208355,215.093898894127,178.670085332146,128.091580576785,123.255327585197,99.1571483037735,26.6716383405865,24.8539978623065,53.1311279004343,48.8511364287753,14.7202963994889,85.4108282748061,22.7988960258821,89.384291532278,933.349384342184,684.865945316433,311.214919092855,199.263322327862,198.805971197314,199.736907418187,198.353147725606,138.182423013445,203.078848710618,139.269530428806,135.889968722027,133.025272480825,224.567433819807,130.835816528119,778.207397610494,810.935942503855,326.852433451933,456.993579684885,395.081216360454,184.807885410989,114.205186046409,29.6696397439,48.6696056308262,39.9806811106634,25.4949259294948,769.489627562626,887.660421931225,961.28553044525,1380.66598617015,1143.66209154596,1730.43728870653,778.218051804443,660.214643427944,833.843011852204,639.768519046728,226.633837130119,147.281781710073,78.5520310415518,73.0147473034183,22.6748455040783,44.8950252104849,1014.3475272074,398.612332377195,978.240929322409,821.650559258046,247.406742241562,137.35118079123,48.9785456123075,159.999671267784,208.841202338795,75.7410151123064,50.4699009324473,58.7128938344045,68.1297065918919,16.5870412333199,18.4927932498361,84.0916906862552,41.1145751994051,5.45872005958493,7.14991288212439,318.361663921504,53.5238365673271,171.005454923611,170.621731257631,77.9832699792732,93.1978312014953,85.7774895217217,74.1660510666741,102.821918225423,72.7717086199167,50.2015477992085,25.3843839973228,51.3823108453932,480.242933090587,246.773743420668,54.9350509498543,3.98235415019888,1119.21873267446,660.576971967981,460.762209843659,244.50996730528,117.44022651458,114.225305580354,177.7679937145,222.810861490451,75.53278514666,76.9555842597491,76.3203020036583,34.3844001811326,769.401054795789,710.049815283539,415.385173891226,190.640751165444,258.278047887798,193.674197248696,404.633917373302,164.504867352661,98.7137450225402,10.3648347085832,74.528586329549,131.754972183859,206.571767878934,355.013351065328,265.579975787509,130.000453136913,9.27126510052548,1201.2222920089,680.457503674745,838.190430875315,2814.41311610709,1723.03074042352,1832.74194555745,1165.88205132785,1682.49635983502,1453.44912450112,6.68269432610579,464.06490258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| |phase1_expression=113.065086055985,54.7891389993797,48.2299193752908,33.5735274550581,56.6012174839372,160.660463219679,131.757529295876,65.0781550145544,20.27357598984,7.72412936862578,10.9579499664323,4.86610169871552,100.323627739687,46.1579724772306,1654.88929670021,2700.6151164455,3665.70424139149,179.182509923479,179.208564722701,589.052836695666,43.5421645573477,892.625651295959,768.710979435887,120.314301940642,172.056960800378,125.182568177074,138.274600767063,117.862764279181,187.553115003441,261.355244561048,338.360759259995,3654.60152576018,2890.80450164748,5182.35096920485,957.543119475475,1563.9355435327,1230.73287954956,1551.07822351098,3044.08250226473,1293.10364761528,1494.10797959878,1969.90317862016,1169.10893009902,39.1539103904045,30.5144562970739,38.3612712017914,212.028054318319,308.941646591093,38.664768161267,31.4976436500339,138.026611722607,146.627615652271,229.358822480926,86.31809489935,72.9323544139147,102.389255542307,141.834052769685,72.7097650111194,153.558193792435,201.016572123372,161.627007894076,144.686615193519,138.729988193338,90.8898714454213,176.018212536921,115.097778621268,260.052895929975,224.767708613109,381.681462907506,619.137233189133,426.539021620603,97.1213346972932,104.912556952016,543.614166915966,716.540741332335,550.612053179403,13.2139057199266,7.53355294702608,13.3637683932932,102.475645566361,92.1280571076265,123.456468821952,20.3803589271008,14.6318278608237,11.6126668310376,127.868806095572,90.5483889882295,81.4565578256563,33.6224298399337,142.452390801291,117.684982412881,33.5565312022741,12.2394840067395,25.9057531986152,16.8941868536394,11.2006721774334,71.9075431074569,240.988476125374,395.134513000963,290.091790672989,189.293556179859,48.7640614174408,2.54805239706646,7.11066703153331,912.509737862267,677.484280280414,651.115485179041,79.5861641641848,58.778899587908,12.6175818205101,732.628534933392,609.235422102594,365.756178648109,256.379211580011,133.228005184754,58.9376313336178,36.5848552246873,12.2909453381925,394.536306169644,262.385830614698,670.254008527294,934.839488044708,154.705161811041,8.49064311333487,12.3573557019938,126.195785273044,3133.16550582982,4879.60881390038,2603.1606718188,6.89036941262184,12.3525162761029,95.6229619578898,11.298580812498,19.4343747571051,10.389402227978,22.064811777215,295.334155165917,500.240428823184,23.2504937758981,18.9397670297827,921.903338390756,1179.62769784815,550.449930814953,666.868818923039,355.08248907078,537.693284035515,489.872615998262,35.7010651619842,794.368053957524,475.601791622065,343.456594368028,442.556183771274,521.06054504877,163.330266098896,230.475992776897,596.107629121387,2553.24714907092,2488.03956598507,2107.64067501711,250.000807450351,480.074844781304,388.934052755792,177.321806953322,324.464218151469,326.892012208355,215.093898894127,178.670085332146,128.091580576785,123.255327585197,99.1571483037735,26.6716383405865,24.8539978623065,53.1311279004343,48.8511364287753,14.7202963994889,85.4108282748061,22.7988960258821,89.384291532278,933.349384342184,684.865945316433,311.214919092855,199.263322327862,198.805971197314,199.736907418187,198.353147725606,138.182423013445,203.078848710618,139.269530428806,135.889968722027,133.025272480825,224.567433819807,130.835816528119,778.207397610494,810.935942503855,326.852433451933,456.993579684885,395.081216360454,184.807885410989,114.205186046409,29.6696397439,48.6696056308262,39.9806811106634,25.4949259294948,769.489627562626,887.660421931225,961.28553044525,1380.66598617015,1143.66209154596,1730.43728870653,778.218051804443,660.214643427944,833.843011852204,639.768519046728,226.633837130119,147.281781710073,78.5520310415518,73.0147473034183,22.6748455040783,44.8950252104849,1014.3475272074,398.612332377195,978.240929322409,821.650559258046,247.406742241562,137.35118079123,48.9785456123075,159.999671267784,208.841202338795,75.7410151123064,50.4699009324473,58.7128938344045,68.1297065918919,16.5870412333199,18.4927932498361,84.0916906862552,41.1145751994051,5.45872005958493,7.14991288212439,318.361663921504,53.5238365673271,171.005454923611,170.621731257631,77.9832699792732,93.1978312014953,85.7774895217217,74.1660510666741,102.821918225423,72.7717086199167,50.2015477992085,25.3843839973228,51.3823108453932,480.242933090587,246.773743420668,54.9350509498543,3.98235415019888,1119.21873267446,660.576971967981,460.762209843659,244.50996730528,117.44022651458,114.225305580354,177.7679937145,222.810861490451,75.53278514666,76.9555842597491,76.3203020036583,34.3844001811326,769.401054795789,710.049815283539,415.385173891226,190.640751165444,258.278047887798,193.674197248696,404.633917373302,164.504867352661,98.7137450225402,10.3648347085832,74.528586329549,131.754972183859,206.571767878934,355.013351065328,265.579975787509,130.000453136913,9.27126510052548,1201.2222920089,680.457503674745,838.190430875315,2814.41311610709,1723.03074042352,1832.74194555745,1165.88205132785,1682.49635983502,1453.44912450112,6.68269432610579,464.06490258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| ||
|short_description=p5@Hist1h2ab,p5@Hist1h2ac,p5@Hist1h2ae,p5@Hist1h2ag,p5@Hist1h2ai,p5@Hist1h2an,p5@Hist1h2ao,p5@Hist1h2ap,p6@Hist1h2ad,p6@Hist1h2ah | |short_description=p5@Hist1h2ab,p5@Hist1h2ac,p5@Hist1h2ae,p5@Hist1h2ag,p5@Hist1h2ai,p5@Hist1h2an,p5@Hist1h2ao,p5@Hist1h2ap,p6@Hist1h2ad,p6@Hist1h2ah | ||
}} | }} | ||
Revision as of 02:03, 18 April 2012
| Short description: | p5@Hist1h2ab, p5@Hist1h2ac, p5@Hist1h2ae, p5@Hist1h2ag, p5@Hist1h2ai, p5@Hist1h2an, p5@Hist1h2ao, p5@Hist1h2ap, p6@Hist1h2ad, p6@Hist1h2ah |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Hist1h2ab_5end, CAGE_peak_5_at_Hist1h2ac_5end, CAGE_peak_5_at_Hist1h2ae_5end, CAGE_peak_5_at_Hist1h2ag_5end, CAGE_peak_5_at_Hist1h2ai_5end, CAGE_peak_5_at_Hist1h2an_5end, CAGE_peak_5_at_Hist1h2ao_5end, CAGE_peak_5_at_Hist1h2ap_5end, CAGE_peak_6_at_Hist1h2ad_5end, CAGE_peak_6_at_Hist1h2ah_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000171127, NM_178189, uc007puk.1_5end |
| EntrezGene: | 319164,319165,319166,319167,319168,319170,319171,319172,319191,665433 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
