Personal tools

FFCP PHASE1:Mm9::chr13:54789460..54789506,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_3_at_Rnf44_5end
|description=CAGE_peak_3_at_Rnf44_5end
|id=chr13:54789460..54789506,-
|id=chr13:54789460..54789506,-
|ontology_enrichment_celltype=CL:0000738!5.01e-07!17;CL:0002087!5.01e-07!17
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=2.24208385946712,10.4692622291808,14.5599756604652,13.0059610861937,16.0286633582831,11.0800319461847,6.77476657727024,14.4618122254565,34.9156030936133,30.4283884218592,17.4642327590015,15.7948874810766,10.785645985666,12.6759583507546,4.99664642723494,5.87178275430495,2.79824751251259,11.0411757875383,13.4372144933624,12.7316895539409,16.4983982893075,7.34753038886551,5.48519557191764,6.87967418011649,3.89995777814189,8.03924749761028,9.90752591165872,8.40337807474967,6.27077284206034,3.78045194639896,3.99114919179548,8.89042942843484,9.22597181376855,0,8.08784535303569,2.49351968037739,5.10423390655923,4.60384793810598,3.1253413780952,2.61761871986899,7.64700934440319,2.04913645487534,3.88408282424923,4.02869817521847,5.27160042341476,5.50640256485045,11.7358701652206,4.14247797122848,13.1811709640683,9.3326351555656,3.3596741190087,8.62515386189829,39.7644776356835,26.8383992544197,24.8709411365423,4.88792928468299,4.01146815914259,4.64104883049698,4.65327859977075,6.34789175126439,4.43681982454325,3.72728985276045,2.66788438833342,26.5470416598013,35.5991890524111,33.3925654024667,17.0772062995491,16.1371688235053,3.83651565541367,3.78016627328734,3.78584930432488,5.14171771926846,4.63823935998388,5.02212276781312,5.46319184803947,2.75765635983006,13.2139057199266,12.1302971180928,11.8277030607307,5.67111037239834,5.48925861614458,4.16730696445408,11.1673199600552,7.31591393041184,11.1542720877071,7.07108605136802,4.8406371471695,5.21918448310842,6.43672643332064,10.2777321745228,21.4499721639242,8.60423876981386,20.3991400112325,9.17495425784289,11.0461990966104,13.8888335000174,8.28622078777336,4.94247935476367,2.07828803682295,2.82671659608272,2.53518155598025,0,5.09610479413291,7.11066703153331,5.41227602528035,6.84071636782766,3.0331466700887,13.245330047411,35.7334279433097,13.9535610720935,5.55153045651635,7.30717147949139,6.6878494204257,6.17962826265753,9.52468527799209,8.41966161908826,16.8092578059374,31.3780604516208,4.42305275974937,3.72063754879041,3.97514733228708,7.27312879702833,9.31958806090611,16.1029438356351,12.7762491156208,9.70736809792647,12.4607729486157,2.39961092397363,10.9280395282836,13.481157546434,22.8750301409313,5.02617408451458,17.3824320192276,15.3429274398198,15.3763152974074,14.4394724130304,6.00852246716866,5.59831367745419,6.31806896084187,13.4682787767343,6.50602214813519,1.83921683546778,3.78130472591233,3.76762044589288,4.96666443804693,4.99643509110914,4.8724896771059,11.9003550539947,6.68260778091811,3.78212160335639,2.81521798662318,2.6303487891309,3.33656699070717,2.43776516565517,3.08673204611915,3.38358253591438,4.91549231119264,4.63226232806487,10.2298859782413,7.87077935634907,5.8631514995274,7.20248245844059,7.81257627431194,6.88674811115913,6.17068451549513,4.88321283975857,8.04820204198858,7.12268588439734,6.7469538464527,8.04420573987567,10.8632204791447,8.62579925809461,11.4166059951346,8.72341721942416,12.4071069652835,5.35103984372279,13.8775888853195,6.34681359992506,6.39864751605702,5.80591679651096,7.47431275668141,9.27744213267376,10.4517680607089,12.5548913234289,12.3377556001573,15.317002789333,14.5774421104156,15.3196483471686,15.4021628824105,8.08937467788799,11.2391785934841,12.3467589417708,4.1726938209678,4.68418901699888,5.63538678365402,4.07302655690629,2.90928730751439,7.71494018793504,8.34722290040196,15.4990655378582,14.1298855057237,12.3397163921801,8.59712618552732,5.17219827719892,7.66580080941492,6.52100125916076,8.72298521970563,6.51178331331525,4.32863948028414,8.0554918486227,14.1057647294281,7.68771956926628,7.18841032636773,10.0478055870496,11.5453939052387,9.85057623993736,8.25228102200796,23.639732546805,16.4430339248278,3.60033682363921,2.93336957595647,3.39490171550376,4.69380496577004,4.35516269348721,7.14130922658041,9.36641509717434,10.2462843669024,13.9522754478728,13.3942005672289,11.4704320301017,15.0235934223329,15.7667473853848,24.1266054302836,14.6854534631052,13.769399644533,12.417153583713,11.0779907091576,9.96299336033727,3.44263385291018,5.04941854408746,4.10160685241134,6.24701990874622,6.24727853425117,8.12493913038677,6.23836287430704,6.51076020814315,5.26253912177363,8.18316402151673,6.32460444714438,20.5645642509957,9.9358059645788,3.38324646967785,4.72372182125371,7.58862565673663,3.98235415019888,4.37005145078967,6.65111825322452,7.54420319023592,4.72483028609236,4.30409207121498,9.8202751403924,7.63420831902762,4.9909632973861,8.21695570633122,7.37930260024991,11.3449097573006,3.74483566329167,5.04171063287669,5.17434735131018,2.57204442037911,3.19212420556092,3.38900753443934,3.62007845324666,7.00269382963578,12.2029288193129,11.6507638975101,7.71849393192367,10.2229476823718,7.10443477461984,4.76472106932431,3.70054266409723,4.92422699235184,8.45294426226567,7.6024373824309,8.03093139749908,3.714963623338,5.74103034846106,6.96963290917357,9.70529016819279,8.00723606222829,18.5276488693302,19.8731062299594,20.7299960706636,9.54670618015114,3.16335993581135,6.09958401380546,5.83228840437727,5.85447228840512,5.45906409365444,5.79916689454729,8.59595939543494,6.02038666563268,12.1838074894285,8.07741107013003,72.7163890902605,6.27969493384711,4.46737924234164,6.61134040369762,3.61647505737647,5.23763989021412,4.92900402312167,5.9894017028217,5.55754525456268,3.14059357073808,26.2107305694658,12.324433704499,3.24360344464263,4.72470402958205,5.58659538804519,5.72885426135941,10.530111803407,6.37035882455835,8.27061352177632,7.87538309595551,8.61136915201498,10.9900541799156,11.5000299272908,9.23633679747163,14.2589820661514,9.06921534460846,19.5347638969177,25.7478768469195,16.1169231709515,7.92077335531981,12.7624083306804,10.9890974560359,7.28852488868824,11.5361583928134,15.2482997506608,9.20650473014354,6.87474616127276,9.10821866421544,8.22099023724771,9.82012066606611,13.5004500046361,17.5625269257446,12.2348450425735,16.5683299760582,5.91587881229807,8.77854721482268,4.95127456686989,5.10524105843418,3.5634237646757,4.41224420280034,3.55594764482584,5.15087643097235,4.81378814387723,7.32821914115013,4.56262739802432,5.09291121742406,5.3375659257833,5.57018825922363,6.37533705407307,5.71552429539688,5.2147946675185,6.75182271622968,5.35711671044299,4.56316652416632,5.82877729055206,3.37204031702741,5.00715998889374,6.24989591519013,6.30532848782715,4.3153450024755,6.76833499629258,4.73525480588117,4.88894809845102,7.2948495315506,6.64356101495375,5.22073756590486,6.13846564754534,4.33823155320705,6.94463799532109,4.49659040288303,4.67863216890817,9.45432637812513,8.7992632751668,5.51478547798789,5.10109238364927
|phase1_expression=2.24208385946712,10.4692622291808,14.5599756604652,13.0059610861937,16.0286633582831,11.0800319461847,6.77476657727024,14.4618122254565,34.9156030936133,30.4283884218592,17.4642327590015,15.7948874810766,10.785645985666,12.6759583507546,4.99664642723494,5.87178275430495,2.79824751251259,11.0411757875383,13.4372144933624,12.7316895539409,16.4983982893075,7.34753038886551,5.48519557191764,6.87967418011649,3.89995777814189,8.03924749761028,9.90752591165872,8.40337807474967,6.27077284206034,3.78045194639896,3.99114919179548,8.89042942843484,9.22597181376855,0,8.08784535303569,2.49351968037739,5.10423390655923,4.60384793810598,3.1253413780952,2.61761871986899,7.64700934440319,2.04913645487534,3.88408282424923,4.02869817521847,5.27160042341476,5.50640256485045,11.7358701652206,4.14247797122848,13.1811709640683,9.3326351555656,3.3596741190087,8.62515386189829,39.7644776356835,26.8383992544197,24.8709411365423,4.88792928468299,4.01146815914259,4.64104883049698,4.65327859977075,6.34789175126439,4.43681982454325,3.72728985276045,2.66788438833342,26.5470416598013,35.5991890524111,33.3925654024667,17.0772062995491,16.1371688235053,3.83651565541367,3.78016627328734,3.78584930432488,5.14171771926846,4.63823935998388,5.02212276781312,5.46319184803947,2.75765635983006,13.2139057199266,12.1302971180928,11.8277030607307,5.67111037239834,5.48925861614458,4.16730696445408,11.1673199600552,7.31591393041184,11.1542720877071,7.07108605136802,4.8406371471695,5.21918448310842,6.43672643332064,10.2777321745228,21.4499721639242,8.60423876981386,20.3991400112325,9.17495425784289,11.0461990966104,13.8888335000174,8.28622078777336,4.94247935476367,2.07828803682295,2.82671659608272,2.53518155598025,0,5.09610479413291,7.11066703153331,5.41227602528035,6.84071636782766,3.0331466700887,13.245330047411,35.7334279433097,13.9535610720935,5.55153045651635,7.30717147949139,6.6878494204257,6.17962826265753,9.52468527799209,8.41966161908826,16.8092578059374,31.3780604516208,4.42305275974937,3.72063754879041,3.97514733228708,7.27312879702833,9.31958806090611,16.1029438356351,12.7762491156208,9.70736809792647,12.4607729486157,2.39961092397363,10.9280395282836,13.481157546434,22.8750301409313,5.02617408451458,17.3824320192276,15.3429274398198,15.3763152974074,14.4394724130304,6.00852246716866,5.59831367745419,6.31806896084187,13.4682787767343,6.50602214813519,1.83921683546778,3.78130472591233,3.76762044589288,4.96666443804693,4.99643509110914,4.8724896771059,11.9003550539947,6.68260778091811,3.78212160335639,2.81521798662318,2.6303487891309,3.33656699070717,2.43776516565517,3.08673204611915,3.38358253591438,4.91549231119264,4.63226232806487,10.2298859782413,7.87077935634907,5.8631514995274,7.20248245844059,7.81257627431194,6.88674811115913,6.17068451549513,4.88321283975857,8.04820204198858,7.12268588439734,6.7469538464527,8.04420573987567,10.8632204791447,8.62579925809461,11.4166059951346,8.72341721942416,12.4071069652835,5.35103984372279,13.8775888853195,6.34681359992506,6.39864751605702,5.80591679651096,7.47431275668141,9.27744213267376,10.4517680607089,12.5548913234289,12.3377556001573,15.317002789333,14.5774421104156,15.3196483471686,15.4021628824105,8.08937467788799,11.2391785934841,12.3467589417708,4.1726938209678,4.68418901699888,5.63538678365402,4.07302655690629,2.90928730751439,7.71494018793504,8.34722290040196,15.4990655378582,14.1298855057237,12.3397163921801,8.59712618552732,5.17219827719892,7.66580080941492,6.52100125916076,8.72298521970563,6.51178331331525,4.32863948028414,8.0554918486227,14.1057647294281,7.68771956926628,7.18841032636773,10.0478055870496,11.5453939052387,9.85057623993736,8.25228102200796,23.639732546805,16.4430339248278,3.60033682363921,2.93336957595647,3.39490171550376,4.69380496577004,4.35516269348721,7.14130922658041,9.36641509717434,10.2462843669024,13.9522754478728,13.3942005672289,11.4704320301017,15.0235934223329,15.7667473853848,24.1266054302836,14.6854534631052,13.769399644533,12.417153583713,11.0779907091576,9.96299336033727,3.44263385291018,5.04941854408746,4.10160685241134,6.24701990874622,6.24727853425117,8.12493913038677,6.23836287430704,6.51076020814315,5.26253912177363,8.18316402151673,6.32460444714438,20.5645642509957,9.9358059645788,3.38324646967785,4.72372182125371,7.58862565673663,3.98235415019888,4.37005145078967,6.65111825322452,7.54420319023592,4.72483028609236,4.30409207121498,9.8202751403924,7.63420831902762,4.9909632973861,8.21695570633122,7.37930260024991,11.3449097573006,3.74483566329167,5.04171063287669,5.17434735131018,2.57204442037911,3.19212420556092,3.38900753443934,3.62007845324666,7.00269382963578,12.2029288193129,11.6507638975101,7.71849393192367,10.2229476823718,7.10443477461984,4.76472106932431,3.70054266409723,4.92422699235184,8.45294426226567,7.6024373824309,8.03093139749908,3.714963623338,5.74103034846106,6.96963290917357,9.70529016819279,8.00723606222829,18.5276488693302,19.8731062299594,20.7299960706636,9.54670618015114,3.16335993581135,6.09958401380546,5.83228840437727,5.85447228840512,5.45906409365444,5.79916689454729,8.59595939543494,6.02038666563268,12.1838074894285,8.07741107013003,72.7163890902605,6.27969493384711,4.46737924234164,6.61134040369762,3.61647505737647,5.23763989021412,4.92900402312167,5.9894017028217,5.55754525456268,3.14059357073808,26.2107305694658,12.324433704499,3.24360344464263,4.72470402958205,5.58659538804519,5.72885426135941,10.530111803407,6.37035882455835,8.27061352177632,7.87538309595551,8.61136915201498,10.9900541799156,11.5000299272908,9.23633679747163,14.2589820661514,9.06921534460846,19.5347638969177,25.7478768469195,16.1169231709515,7.92077335531981,12.7624083306804,10.9890974560359,7.28852488868824,11.5361583928134,15.2482997506608,9.20650473014354,6.87474616127276,9.10821866421544,8.22099023724771,9.82012066606611,13.5004500046361,17.5625269257446,12.2348450425735,16.5683299760582,5.91587881229807,8.77854721482268,4.95127456686989,5.10524105843418,3.5634237646757,4.41224420280034,3.55594764482584,5.15087643097235,4.81378814387723,7.32821914115013,4.56262739802432,5.09291121742406,5.3375659257833,5.57018825922363,6.37533705407307,5.71552429539688,5.2147946675185,6.75182271622968,5.35711671044299,4.56316652416632,5.82877729055206,3.37204031702741,5.00715998889374,6.24989591519013,6.30532848782715,4.3153450024755,6.76833499629258,4.73525480588117,4.88894809845102,7.2948495315506,6.64356101495375,5.22073756590486,6.13846564754534,4.33823155320705,6.94463799532109,4.49659040288303,4.67863216890817,9.45432637812513,8.7992632751668,5.51478547798789,5.10109238364927
|short_description=p3@Rnf44
|short_description=p3@Rnf44
}}
}}

Revision as of 02:30, 18 April 2012

Short description:p3@Rnf44
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnf44_5end
Coexpression cluster:NA
Association with transcript: -5bp_to_ENSMUST00000125871_5end
EntrezGene:Rnf44
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rnf44

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.01
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E734.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F230.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.46
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.79
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.68
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.44
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.73
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H98.04
GP2+ M cell, pool2.CNhs13231.11846-124I19.91
GP2+ M cell, pool3.CNhs13240.11847-124I28.40
Ileum epithelium, pool1.CNhs13199.10252-104B96.27
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.09
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.18
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A239.76
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.84
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A124.87
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C726.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E735.60
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D233.39
Mouse Microglia, donor1.CNhs12629.11718-123C817.08
Mouse Microglia, donor2.CNhs12634.11736-123E816.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D96.44
Mouse Schwann, donor2.CNhs12573.11746-123F910.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G321.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C420.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.89
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.25
accessory axillary lymph node, adult.CNhs10475.1063-29H935.73
adrenal gland, adult.CNhs10508.49-24D713.95
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I16.69
adrenal gland, embryo E18.CNhs11026.1262-18F56.18
adrenal gland, neonate N00.CNhs11191.1311-23C19.52
adrenal gland, neonate N25.CNhs11223.1377-27I38.42
amnion, adult pregnant day17.5.CNhs10488.583-22A816.81
aorta, adult.CNhs10498.46-23H131.38
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B216.10
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H79.71
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.46
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.93
corpora quadrigemina, adult.CNhs10501.16-22A413.48
corpus striatum, adult.CNhs10487.19-21D822.88
corpus striatum, neonate N00.CNhs11226.630-43F15.03
cortex, adult.CNhs10473.12-14D517.38
cortex, neonate N30.CNhs11107.1392-42F215.34
diencephalon, adult.CNhs10482.20-12F215.38
diencephalon, neonate N30.CNhs11201.1388-42B214.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.60
epididymis, adult.CNhs10490.58-23B26.32
eyeball, adult.CNhs10484.31-12G413.47
eyeball, embryo E12.CNhs11016.345-16C66.51
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C64.97
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E26.68
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.23
heart, embryo E11.CNhs10586.331-24E97.87
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I97.20
heart, embryo E14.CNhs10597.403-26D47.81
heart, embryo E15.CNhs11017.431-16C86.89
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E37.12
heart, neonate N03.CNhs11221.1349-25I26.75
heart, neonate N10.CNhs11118.749-24G18.04
heart, neonate N16.CNhs11209.782-15G110.86
heart, neonate N20.CNhs11127.821-26I68.63
heart, neonate N25.CNhs11196.1351-25D311.42
heart, neonate N30.CNhs11202.1390-42D28.72
hippocampus, adult.CNhs10478.13-16E812.41
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I313.88
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I56.40
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D87.47
intestine, embryo E16.CNhs10585.463-22H49.28
intestine, embryo E17.CNhs10582.482-18D310.45
intestine, embryo E18.CNhs10526.1289-20F712.55
intestine, neonate N00.CNhs11126.644-26D112.34
intestine, neonate N01.CNhs11192.1322-23E915.32
intestine, neonate N06.CNhs11102.688-20B814.58
intestine, neonate N07.CNhs11095.720-20F215.32
intestine, neonate N10.CNhs11098.755-23A515.40
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E311.24
intestine, neonate N30.CNhs11131.1384-42G112.35
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G77.71
kidney, neonate N10.CNhs11206.758-6D58.35
kidney, neonate N20.CNhs11113.832-19I115.50
kidney, neonate N25.CNhs11122.1353-25F314.13
kidney, neonate N30.CNhs11203.1385-42H112.34
liver, adult pregnant day01.CNhs10466.508-5B28.60
liver, embryo E12.CNhs10601.355-15F85.17
liver, embryo E13.CNhs10524.378-3H67.67
liver, embryo E14.CNhs10594.409-16E16.52
liver, embryo E15.CNhs10520.433-16D78.72
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F414.11
liver, neonate N03.CNhs11123.1345-25G27.69
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B911.55
liver, neonate N20.CNhs11220.823-25A39.85
liver, neonate N25.CNhs11198.1368-26H18.25
liver, neonate N30.CNhs11106.1382-42D123.64
lung, adult.CNhs10474.28-22B116.44
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A64.36
lung, embryo E18.CNhs10583.1287-20I67.14
lung, neonate N00.CNhs11224.640-42C69.37
lung, neonate N06.CNhs11212.683-20E510.25
lung, neonate N07.CNhs11111.715-19A313.95
lung, neonate N10.CNhs11219.750-23E613.39
lung, neonate N20.CNhs11109.822-18A411.47
lung, neonate N25.CNhs11119.1359-25C715.02
lung, neonate N30.CNhs11133.1394-42H215.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.69
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H212.42
medulla oblongata, adult.CNhs10477.17-12C211.08
medulla oblongata, neonate N30.CNhs11200.1396-42A39.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I920.56
ovary, adult.CNhs10507.91-2I79.94
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G67.59
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B68.22
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E65.04
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I712.20
placenta, adult pregnant day17.CNhs10464.577-18G311.65
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C310.22
skin, neonate N00.CNhs11124.650-25G47.10
skin, neonate N03.CNhs11215.662-22H34.76
skin, neonate N06.CNhs11097.693-20I53.70
skin, neonate N10.CNhs11108.762-6C44.92
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G28.03
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F25.74
spleen, neonate N10.CNhs11116.752-24D16.97
spleen, neonate N20.CNhs11112.824-19H19.71
spleen, neonate N25.CNhs11099.1354-25G38.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C618.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D320.73
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G86.10
stomach, embryo E16.CNhs11022.459-17D45.83
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B85.80
stomach, neonate N07.CNhs11210.718-18A98.60
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I112.18
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G572.72
testis, embryo E13.CNhs11031.389-23F56.28
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G56.61
testis, embryo E17.CNhs11029.486-18I53.62
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I45.99
testis, neonate N10.CNhs11204.763-44D95.56
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E226.21
thymus, adult.CNhs10471.38-12B512.32
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C55.59
thymus, embryo E17.CNhs10581.478-18C15.73
thymus, embryo E18.CNhs10595.1273-19G410.53
thymus, neonate N02.CNhs11181.1541-43F86.37
thymus, neonate N03.CNhs11137.2104-43C78.27
thymus, neonate N06.CNhs11197.681-26C47.88
thymus, neonate N07.CNhs11211.713-19D38.61
thymus, neonate N10.CNhs11194.748-24E410.99
thymus, neonate N20.CNhs11186.820-7A211.50
thymus, neonate N25.CNhs11125.1362-25G79.24
thymus, neonate N30.CNhs11132.1393-42G214.26
tongue, adult.CNhs10499.32-1B49.07
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F725.75
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.12
urinary bladder, adult.CNhs10481.879-12E47.92
uterus, adult pregnant day19.CNhs10497.590-15F512.76
uterus, adult.CNhs10509.92-27E510.99
vagina, adult.CNhs10502.89-27D57.29
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I85.92
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.34
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C29.45
whole body, neonate N01.CNhs10576.659-23C68.80
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:54789460..54789506,-&oldid=806222"