Personal tools

FFCP PHASE1:Mm9::chr18:37975044..37975091,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr18:37975044..37975091,+
|short_description=p6@Pcdhga11,p6@Pcdhga12,p6@Pcdhga3,p6@Pcdhga8,p6@Pcdhga9,p6@Pcdhgb6,p6@Pcdhgc3,p6@Pcdhgc4,p6@Pcdhgc5
|description=CAGE_peak_6_at_Pcdhga11_5end,CAGE_peak_6_at_Pcdhga12_5end,CAGE_peak_6_at_Pcdhga3_5end,CAGE_peak_6_at_Pcdhga8_5end,CAGE_peak_6_at_Pcdhga9_5end,CAGE_peak_6_at_Pcdhgb6_5end,CAGE_peak_6_at_Pcdhgc3_5end,CAGE_peak_6_at_Pcdhgc4_5end,CAGE_peak_6_at_Pcdhgc5_5end
|association_with_transcript=311bp_to_ENSMUST00000066140,NM_033582,uc008erf.1_5end
|EntrezGene=93703,93706,93707,93708,93711,93716,93717,93723,93724
|EntrezGene=93703,93706,93707,93708,93711,93716,93717,93723,93724
|HGNC=
|HGNC=
|UniProt=Q91XX0
|UniProt=Q91XX0
|association_with_transcript=311bp_to_ENSMUST00000066140,NM_033582,uc008erf.1_5end
|description=CAGE_peak_6_at_Pcdhga11_5end,CAGE_peak_6_at_Pcdhga12_5end,CAGE_peak_6_at_Pcdhga3_5end,CAGE_peak_6_at_Pcdhga8_5end,CAGE_peak_6_at_Pcdhga9_5end,CAGE_peak_6_at_Pcdhgb6_5end,CAGE_peak_6_at_Pcdhgc3_5end,CAGE_peak_6_at_Pcdhgc4_5end,CAGE_peak_6_at_Pcdhgc5_5end
|id=chr18:37975044..37975091,+
|ontology_enrichment_disease=
|phase1_expression=1.12104192973356,0,0,0,0,0.503637815735669,0.700837921786577,0.258246646883153,0,0,0,0,0,0.0874204024189974,0.666219523631325,0.202475267389826,0.699561878128147,0,0.137114433605739,0,1.61582251287033,0,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,1.33016393619462,0.504060259519861,0,0,0,0,0.288851619751275,0.997407872150954,0.204169356262369,0,0,0,0,0,0,1.25896817975577,2.02753862439029,1.65192076945513,0.782391344348039,4.36050312760893,4.17403747195497,0.777719596297134,4.05960622713551,1.43752564364972,0.167782606057736,0,0,0.257259436035947,0,0,12.1389876515759,11.6378015439847,12.0427966666174,1.0165335962074,1.77858959222228,0,0,0,2.69640099466564,5.37905627450176,3.7328260431052,4.86021377994086,4.6271491497304,29.4220513935918,23.1911967999194,3.79721477566358,4.12135525378416,5.51531271966013,3.30347642998166,5.87361755191863,6.29786786350598,10.4190167306853,13.631658896759,6.77187381723788,6.42120897703176,6.19038871034848,4.88954392885792,16.4992007865254,20.2167786734726,13.2343606535963,0,0.151143120213571,0,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0.505524445014783,0.68510327831436,0,0.890652834388949,1.90833859442749,0.304465478312141,0.691846491768175,1.65794904607885,1.17588707135705,1.88499886994513,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0,3.72783522436244,3.51336956413857,5.65506108396329,0,0,0,0,9.8861822007183,2.74500361691176,30.7853162676518,5.38855392596057,6.90431734791892,8.10373373782284,6.97637431191358,0.916554274652847,0.248813941220186,0.252722758433675,1.68353484709179,0.650602214813519,1.37941262660084,2.16074555766419,1.20563854268572,2.85753296435577,2.562274405697,2.52994656311268,3.3631438196072,3.01795190105979,1.51284864134255,1.58356011747554,0.876782929710299,0.834141747676794,0.696504333044333,0.61734640922383,0.796137067273973,0,0,0,0.828503090142008,0.469052119962192,0.540186184383045,0,0.393528463494808,0.925602677324269,0.697601834251224,0.268273401399619,0.467061369468678,0.16455984991348,0.32833492815819,0.0810688095458557,0,0,0.268412837520744,3.99550902271842,14.2008365083413,0,0.528901133327089,0,0.232236671860439,0.644337306610467,0.605050573870028,0.22237804384487,0.190225626112559,0,0.494096864172033,0.251335208800269,0.795825888164603,0.58489226135736,0,0.432276099749388,0.199141273254367,0.569003702859245,0.799739588268102,1.1270773567308,0.814605311381257,0.387904974335251,0.561086559122548,0.505892296994058,0.442830443938806,0.784993639206874,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.763877555344259,0.863088412352432,0.648540907100142,0,0,0,0,0,0,0,0.923765950833023,0.37898282354097,0.325929952884052,1.18821560042632,1.40814148973101,1.50755631697634,0.714130922658041,0.780534591431195,1.10344600874334,0.664394068946325,0.318909537314974,0.327726629431476,0.863424909329478,0.578596234326046,0,0,0,0,5.77982123956051,8.32202974804643,0,0,0.631016438832513,0,0,0,0,0,0,0.584511715822624,0,8.03303291054518,0.141940085208269,1.78065603667255,1.14020871547503,0.164970122972535,0,1.21390318077491,1.209294227859,1.13163047853539,0.885905678642318,0,0.775284879504663,2.54473610634254,2.13898427030833,0.632073515871632,2.10837217149998,0,7.14923172082955,1.26042765821917,1.29358683782755,1.07168517515796,1.59606210278046,3.38900753443934,2.46823530903181,6.08929898229199,0,0,0,0,0.322928853391811,1.02531972377865,0.835606408021955,0.164140899745061,0,6.11903496634682,0,1.65109494370578,0,0.565105371014073,0.410082683163076,0.457556346413045,0,0.69975726161829,0,0.954670618015114,0.949007980743406,1.01659733563424,0.648032044930808,0.418176592028937,0.218362563746178,0.674321731924103,0.743881101528023,0.523511883968059,0.777689839750757,1.86401793926078,0,1.34564891439581,2.64733584731356,0.777804753376191,0.774958940866387,0.844780627453891,1.29092962510329,0.781226309063701,0.104859344425711,0,0.288030006257865,0.948033361884535,0.810900861160657,0.308132871494482,0.51968329191118,1.25318686967237,1.78813219303138,3.00488623799922,2.36303243479324,1.71642964911851,2.13379058634,1.41156659191577,1.65678397257579,0.865906574762965,0.467507608726276,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,7.34177395402186,10.5874804396651,5.72895513439397,7.04598047609119,3.42541259885321,6.0431511791176,4.05013500139084,4.5032120322422,1.35942722695261,3.10656187051092,0.207574695168353,1.99512436700516,1.02440163452481,2.43106717068294,1.88651846365184,1.83843508450014,3.77819437262746,1.23621034343337,1.60459604795908,3.53776096469316,2.28131369901216,2.82939512079114,2.52832070168682,4.28968521112624,2.92920891673628,4.28664322154766,3.24476112645595,3.8581844092741,2.88460130562315,3.09117732282234,2.40008476669791,2.48466128623072,3.09967046931517,3.77900683244054,2.72917203204459,2.70766745253365,3.47563148458268,2.63069711437843,0.950628796921032,2.80571135828869,3.32178050747688,3.34915240076916,3.27384834535751,2.78886314134739,2.12197272079256,9.242991383704,2.8071793013449,1.28922632428979,2.10417165275728,2.20591419119516,0
|phase1_expression=1.12104192973356,0,0,0,0,0.503637815735669,0.700837921786577,0.258246646883153,0,0,0,0,0,0.0874204024189974,0.666219523631325,0.202475267389826,0.699561878128147,0,0.137114433605739,0,1.61582251287033,0,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,1.33016393619462,0.504060259519861,0,0,0,0,0.288851619751275,0.997407872150954,0.204169356262369,0,0,0,0,0,0,1.25896817975577,2.02753862439029,1.65192076945513,0.782391344348039,4.36050312760893,4.17403747195497,0.777719596297134,4.05960622713551,1.43752564364972,0.167782606057736,0,0,0.257259436035947,0,0,12.1389876515759,11.6378015439847,12.0427966666174,1.0165335962074,1.77858959222228,0,0,0,2.69640099466564,5.37905627450176,3.7328260431052,4.86021377994086,4.6271491497304,29.4220513935918,23.1911967999194,3.79721477566358,4.12135525378416,5.51531271966013,3.30347642998166,5.87361755191863,6.29786786350598,10.4190167306853,13.631658896759,6.77187381723788,6.42120897703176,6.19038871034848,4.88954392885792,16.4992007865254,20.2167786734726,13.2343606535963,0,0.151143120213571,0,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,0,0,0.505524445014783,0.68510327831436,0,0.890652834388949,1.90833859442749,0.304465478312141,0.691846491768175,1.65794904607885,1.17588707135705,1.88499886994513,0,0.433798070759735,0,0.323533699894818,0.441683036920787,0,3.72783522436244,3.51336956413857,5.65506108396329,0,0,0,0,9.8861822007183,2.74500361691176,30.7853162676518,5.38855392596057,6.90431734791892,8.10373373782284,6.97637431191358,0.916554274652847,0.248813941220186,0.252722758433675,1.68353484709179,0.650602214813519,1.37941262660084,2.16074555766419,1.20563854268572,2.85753296435577,2.562274405697,2.52994656311268,3.3631438196072,3.01795190105979,1.51284864134255,1.58356011747554,0.876782929710299,0.834141747676794,0.696504333044333,0.61734640922383,0.796137067273973,0,0,0,0.828503090142008,0.469052119962192,0.540186184383045,0,0.393528463494808,0.925602677324269,0.697601834251224,0.268273401399619,0.467061369468678,0.16455984991348,0.32833492815819,0.0810688095458557,0,0,0.268412837520744,3.99550902271842,14.2008365083413,0,0.528901133327089,0,0.232236671860439,0.644337306610467,0.605050573870028,0.22237804384487,0.190225626112559,0,0.494096864172033,0.251335208800269,0.795825888164603,0.58489226135736,0,0.432276099749388,0.199141273254367,0.569003702859245,0.799739588268102,1.1270773567308,0.814605311381257,0.387904974335251,0.561086559122548,0.505892296994058,0.442830443938806,0.784993639206874,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.763877555344259,0.863088412352432,0.648540907100142,0,0,0,0,0,0,0,0.923765950833023,0.37898282354097,0.325929952884052,1.18821560042632,1.40814148973101,1.50755631697634,0.714130922658041,0.780534591431195,1.10344600874334,0.664394068946325,0.318909537314974,0.327726629431476,0.863424909329478,0.578596234326046,0,0,0,0,5.77982123956051,8.32202974804643,0,0,0.631016438832513,0,0,0,0,0,0,0.584511715822624,0,8.03303291054518,0.141940085208269,1.78065603667255,1.14020871547503,0.164970122972535,0,1.21390318077491,1.209294227859,1.13163047853539,0.885905678642318,0,0.775284879504663,2.54473610634254,2.13898427030833,0.632073515871632,2.10837217149998,0,7.14923172082955,1.26042765821917,1.29358683782755,1.07168517515796,1.59606210278046,3.38900753443934,2.46823530903181,6.08929898229199,0,0,0,0,0.322928853391811,1.02531972377865,0.835606408021955,0.164140899745061,0,6.11903496634682,0,1.65109494370578,0,0.565105371014073,0.410082683163076,0.457556346413045,0,0.69975726161829,0,0.954670618015114,0.949007980743406,1.01659733563424,0.648032044930808,0.418176592028937,0.218362563746178,0.674321731924103,0.743881101528023,0.523511883968059,0.777689839750757,1.86401793926078,0,1.34564891439581,2.64733584731356,0.777804753376191,0.774958940866387,0.844780627453891,1.29092962510329,0.781226309063701,0.104859344425711,0,0.288030006257865,0.948033361884535,0.810900861160657,0.308132871494482,0.51968329191118,1.25318686967237,1.78813219303138,3.00488623799922,2.36303243479324,1.71642964911851,2.13379058634,1.41156659191577,1.65678397257579,0.865906574762965,0.467507608726276,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,7.34177395402186,10.5874804396651,5.72895513439397,7.04598047609119,3.42541259885321,6.0431511791176,4.05013500139084,4.5032120322422,1.35942722695261,3.10656187051092,0.207574695168353,1.99512436700516,1.02440163452481,2.43106717068294,1.88651846365184,1.83843508450014,3.77819437262746,1.23621034343337,1.60459604795908,3.53776096469316,2.28131369901216,2.82939512079114,2.52832070168682,4.28968521112624,2.92920891673628,4.28664322154766,3.24476112645595,3.8581844092741,2.88460130562315,3.09117732282234,2.40008476669791,2.48466128623072,3.09967046931517,3.77900683244054,2.72917203204459,2.70766745253365,3.47563148458268,2.63069711437843,0.950628796921032,2.80571135828869,3.32178050747688,3.34915240076916,3.27384834535751,2.78886314134739,2.12197272079256,9.242991383704,2.8071793013449,1.28922632428979,2.10417165275728,2.20591419119516,0
|short_description=p6@Pcdhga11,p6@Pcdhga12,p6@Pcdhga3,p6@Pcdhga8,p6@Pcdhga9,p6@Pcdhgb6,p6@Pcdhgc3,p6@Pcdhgc4,p6@Pcdhgc5
}}
}}

Revision as of 03:19, 18 April 2012

Short description:p6@Pcdhga11, p6@Pcdhga12, p6@Pcdhga3, p6@Pcdhga8, p6@Pcdhga9, p6@Pcdhgb6, p6@Pcdhgc3, p6@Pcdhgc4, p6@Pcdhgc5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Pcdhga11_5end, CAGE_peak_6_at_Pcdhga12_5end, CAGE_peak_6_at_Pcdhga3_5end, CAGE_peak_6_at_Pcdhga8_5end, CAGE_peak_6_at_Pcdhga9_5end, CAGE_peak_6_at_Pcdhgb6_5end, CAGE_peak_6_at_Pcdhgc3_5end, CAGE_peak_6_at_Pcdhgc4_5end, CAGE_peak_6_at_Pcdhgc5_5end
Coexpression cluster:NA
Association with transcript: 311bp_to_ENSMUST00000066140, NM_033582, uc008erf.1_5end
EntrezGene:93703,93706,93707,93708,93711,93716,93717,93723,93724
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Pcdhga11p6@Pcdhga12p6@Pcdhga3p6@Pcdhga8p6@Pcdhga9p6@Pcdhgb6p6@Pcdhgc3p6@Pcdhgc4p6@Pcdhgc5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C312.14
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.19
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.23
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.89
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F130.79
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G114.20
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A38.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I59.24
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:37975044..37975091,%2B&oldid=812912"