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FFCP PHASE1:Mm9::chr14:56290901..56290962,-: Difference between revisions

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|description=CAGE_peak_2_at_Nedd8_5end
|description=CAGE_peak_2_at_Nedd8_5end
|id=chr14:56290901..56290962,-
|id=chr14:56290901..56290962,-
|ontology_enrichment_celltype=CL:0000548!5.45e-21!115;CL:0000004!5.45e-21!115;CL:0000255!5.45e-21!115;CL:0002371!5.58e-20!118;CL:0000144!3.08e-19!121;CL:0000012!3.08e-19!121;CL:0000034!1.09e-16!97;CL:0000723!1.26e-15!91;CL:0000048!1.26e-15!91;CL:0002319!1.29e-14!43;CL:0000221!1.35e-14!44;CL:0000133!1.35e-14!44;CL:0000055!5.11e-12!50;CL:0000540!1.56e-10!33;CL:0000047!1.56e-10!33;CL:0000031!1.56e-10!33;CL:0000404!1.56e-10!33;CL:0002321!7.06e-10!70;CL:0000220!7.06e-10!70;CL:0000117!8.96e-10!23;CL:0000337!8.96e-10!23;CL:0000219!1.25e-09!54;CL:0000393!8.65e-09!39;CL:0000211!8.65e-09!39;CL:0000988!2.89e-07!32;CL:0002032!2.89e-07!32;CL:0000037!2.89e-07!32;CL:0000566!2.89e-07!32;CL:0000837!2.89e-07!32;CL:0002320!4.14e-07!46;CL:0000134!4.14e-07!46;CL:0000063!5.62e-07!66
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=15.8547358633746,15.0059425284925,11.3749809847384,6.35174843744343,6.51164448930251,15.277013743982,16.5864974822823,14.9783055192228,18.4433226018683,17.0867104215055,64.0355201163389,51.3732703929966,17.2912737230518,18.5331253128274,28.647439516147,23.28465574983,20.2872944657163,32.3348719492194,32.0847774637429,33.1023928402464,23.4719480816953,26.7092658730381,42.0531660513686,24.1588558418044,24.5467930741872,15.5042630311055,17.6612418425221,19.1769397090441,16.1519906537918,20.1624103807945,29.0466968958449,24.131165591466,20.9122027778754,0,23.3969811998532,26.9300125480758,25.5211695327961,10.8818223991596,19.533383613095,11.5175223674236,5.88231488031014,14.3439551841274,11.1667381197165,14.9817213390937,15.3079166141467,16.3356609423897,35.2076104956618,37.2823017410564,29.8773208518882,24.8870270815083,17.778275546421,31.6255641602937,29.8653038782771,17.4086914082723,24.5348473373999,19.551717138732,13.7536051170603,13.4074743992135,34.5961148069912,30.1524858185059,40.5652098243955,42.0167219765724,28.4574334755565,37.3458382671781,39.554654502679,34.8135256323589,41.6444153620583,59.553837324841,21.3600601355464,23.3560273313825,27.7628948983824,40.2767888009363,41.5232856989033,28.5403562170843,29.0411777185256,29.4150011715207,28.6301290598411,24.1329068981005,23.8090126547177,31.1251639043257,30.8313358940121,25.5247551572812,31.2684958881547,42.207195752376,22.4613424231911,27.6950870345248,28.1895927982224,32.0607046819517,32.5622631332691,24.7874717150256,13.9134954576805,11.185510400758,21.0791113449403,7.01614149129162,5.84798775702902,8.06448396775204,11.3759980306719,19.7699174190547,30.1351765339328,22.6137327686618,19.9997656082886,26.9485602570067,15.2883143823987,21.3320010945999,30.30874574157,33.1901423772379,34.88118670602,12.2176751299394,16.0541487861246,8.01587550950054,25.502343034622,21.9215144384742,18.2186242832286,21.2518923179198,16.5800077061344,12.4409925416379,12.6069433544531,4.62717942143717,9.73071607144862,13.2648816956876,11.9254419968613,20.8496358848145,18.6391761218122,11.4184510834503,13.823482649688,16.6047085885584,24.3224702747018,51.5916348654331,28.9720117726587,13.6309481858389,20.1300265240196,20.2303506901712,15.4703644971126,18.4115129277838,20.3632283668369,19.1444690419954,13.5446353920921,12.5651040316194,16.6797020566225,5.47148825304832,19.778307330331,24.3696230699481,18.9065236295617,15.2211866014072,11.4301318574231,15.7579875950365,15.554486276915,8.01980449290949,32.1196309469935,19.4779262572854,19.5305747821983,21.7003775103299,9.73165372289593,9.75106066262066,11.3180175024369,19.5053581482123,46.3460703626735,44.263840023731,27.8480229407681,23.6123380690472,20.6382932783365,28.9899918952234,21.5437709382541,18.495837784256,22.0601971428951,15.3472403535269,19.8522317035718,17.2812706703411,18.5952630402233,15.1034066952768,8.26901857367728,11.2573990317506,7.02560368931362,11.6759584321523,15.7717461423095,17.5966887168576,5.94753809370836,17.7181879664575,21.9686898051291,23.9203772016252,15.5929628199733,13.1094291005173,14.0098167622268,14.6473732106671,11.8632265386128,12.8465184684728,14.0747716928151,16.3144307073744,10.7230247915516,12.5834717211591,12.3198688428576,11.3510525754989,31.6745394591646,22.6212054967263,6.76246414038483,17.7176655225423,10.6673867942194,10.9411879028897,8.60016904889899,6.9376769550413,8.00693511991011,6.04646103216823,4.74324203339438,21.1893284259439,18.0834275504147,20.4624522270217,15.0116489827492,12.5412123071257,12.9859184408524,8.91858026097513,10.5387897403773,12.3552635934637,1.43768206527355,9.30352369171258,10.6092808858951,8.33510297225469,8.96987067609561,7.23665282045051,7.57488079683079,23.6864264713106,15.4816727619925,23.424821836976,19.7139808562342,12.2279567932526,12.3782693260727,6.82967767502296,10.719189799221,11.2946991720875,11.1618338060241,9.66793556822854,10.0157289482219,8.96824163205372,13.5712155545345,17.9488875660174,16.7199852826472,7.17435540392304,20.5504755184374,20.2776217804511,15.2459499200308,10.6037789425837,29.3422644057119,32.0159770323244,21.5423397732799,21.0292542198246,19.8290819933331,22.0799694015289,21.8597778904443,19.2888866221466,20.9502522311657,12.8528526568723,8.94222536812092,17.8065603667255,15.6371480979433,8.41347627159931,5.30980553359851,24.0352829793432,27.2091201268276,16.597247018519,10.9261700365886,8.60818414242997,14.2135561242522,10.1789444253702,6.41695281092498,7.26884543252377,8.4334886859999,3.09406629744561,4.42571487479924,21.6073312837572,23.4139217646786,13.7175702420219,14.0098784577396,14.2695054081656,13.8221177305782,11.8741330154694,18.0697215209057,12.921756322693,9.92377791247329,8.40919890001548,8.23468576149118,9.34850336386416,11.1016279922917,9.35603128546849,11.0762717919343,19.4696567111035,14.8657666294132,15.0662413613152,20.3713980106683,16.0113188453987,18.3170265146174,20.132479242174,14.4481665494777,13.8551937800421,14.9255971708778,10.5013767981662,17.7148156405436,16.2655573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|phase1_expression=15.8547358633746,15.0059425284925,11.3749809847384,6.35174843744343,6.51164448930251,15.277013743982,16.5864974822823,14.9783055192228,18.4433226018683,17.0867104215055,64.0355201163389,51.3732703929966,17.2912737230518,18.5331253128274,28.647439516147,23.28465574983,20.2872944657163,32.3348719492194,32.0847774637429,33.1023928402464,23.4719480816953,26.7092658730381,42.0531660513686,24.1588558418044,24.5467930741872,15.5042630311055,17.6612418425221,19.1769397090441,16.1519906537918,20.1624103807945,29.0466968958449,24.131165591466,20.9122027778754,0,23.3969811998532,26.9300125480758,25.5211695327961,10.8818223991596,19.533383613095,11.5175223674236,5.88231488031014,14.3439551841274,11.1667381197165,14.9817213390937,15.3079166141467,16.3356609423897,35.2076104956618,37.2823017410564,29.8773208518882,24.8870270815083,17.778275546421,31.6255641602937,29.8653038782771,17.4086914082723,24.5348473373999,19.551717138732,13.7536051170603,13.4074743992135,34.5961148069912,30.1524858185059,40.5652098243955,42.0167219765724,28.4574334755565,37.3458382671781,39.554654502679,34.8135256323589,41.6444153620583,59.553837324841,21.3600601355464,23.3560273313825,27.7628948983824,40.2767888009363,41.5232856989033,28.5403562170843,29.0411777185256,29.4150011715207,28.6301290598411,24.1329068981005,23.8090126547177,31.1251639043257,30.8313358940121,25.5247551572812,31.2684958881547,42.207195752376,22.4613424231911,27.6950870345248,28.1895927982224,32.0607046819517,32.5622631332691,24.7874717150256,13.9134954576805,11.185510400758,21.0791113449403,7.01614149129162,5.84798775702902,8.06448396775204,11.3759980306719,19.7699174190547,30.1351765339328,22.6137327686618,19.9997656082886,26.9485602570067,15.2883143823987,21.3320010945999,30.30874574157,33.1901423772379,34.88118670602,12.2176751299394,16.0541487861246,8.01587550950054,25.502343034622,21.9215144384742,18.2186242832286,21.2518923179198,16.5800077061344,12.4409925416379,12.6069433544531,4.62717942143717,9.73071607144862,13.2648816956876,11.9254419968613,20.8496358848145,18.6391761218122,11.4184510834503,13.823482649688,16.6047085885584,24.3224702747018,51.5916348654331,28.9720117726587,13.6309481858389,20.1300265240196,20.2303506901712,15.4703644971126,18.4115129277838,20.3632283668369,19.1444690419954,13.5446353920921,12.5651040316194,16.6797020566225,5.47148825304832,19.778307330331,24.3696230699481,18.9065236295617,15.2211866014072,11.4301318574231,15.7579875950365,15.554486276915,8.01980449290949,32.1196309469935,19.4779262572854,19.5305747821983,21.7003775103299,9.73165372289593,9.75106066262066,11.3180175024369,19.5053581482123,46.3460703626735,44.263840023731,27.8480229407681,23.6123380690472,20.6382932783365,28.9899918952234,21.5437709382541,18.495837784256,22.0601971428951,15.3472403535269,19.8522317035718,17.2812706703411,18.5952630402233,15.1034066952768,8.26901857367728,11.2573990317506,7.02560368931362,11.6759584321523,15.7717461423095,17.5966887168576,5.94753809370836,17.7181879664575,21.9686898051291,23.9203772016252,15.5929628199733,13.1094291005173,14.0098167622268,14.6473732106671,11.8632265386128,12.8465184684728,14.0747716928151,16.3144307073744,10.7230247915516,12.5834717211591,12.3198688428576,11.3510525754989,31.6745394591646,22.6212054967263,6.76246414038483,17.7176655225423,10.6673867942194,10.9411879028897,8.60016904889899,6.9376769550413,8.00693511991011,6.04646103216823,4.74324203339438,21.1893284259439,18.0834275504147,20.4624522270217,15.0116489827492,12.5412123071257,12.9859184408524,8.91858026097513,10.5387897403773,12.3552635934637,1.43768206527355,9.30352369171258,10.6092808858951,8.33510297225469,8.96987067609561,7.23665282045051,7.57488079683079,23.6864264713106,15.4816727619925,23.424821836976,19.7139808562342,12.2279567932526,12.3782693260727,6.82967767502296,10.719189799221,11.2946991720875,11.1618338060241,9.66793556822854,10.0157289482219,8.96824163205372,13.5712155545345,17.9488875660174,16.7199852826472,7.17435540392304,20.5504755184374,20.2776217804511,15.2459499200308,10.6037789425837,29.3422644057119,32.0159770323244,21.5423397732799,21.0292542198246,19.8290819933331,22.0799694015289,21.8597778904443,19.2888866221466,20.9502522311657,12.8528526568723,8.94222536812092,17.8065603667255,15.6371480979433,8.41347627159931,5.30980553359851,24.0352829793432,27.2091201268276,16.597247018519,10.9261700365886,8.60818414242997,14.2135561242522,10.1789444253702,6.41695281092498,7.26884543252377,8.4334886859999,3.09406629744561,4.42571487479924,21.6073312837572,23.4139217646786,13.7175702420219,14.0098784577396,14.2695054081656,13.8221177305782,11.8741330154694,18.0697215209057,12.921756322693,9.92377791247329,8.40919890001548,8.23468576149118,9.34850336386416,11.1016279922917,9.35603128546849,11.0762717919343,19.4696567111035,14.8657666294132,15.0662413613152,20.3713980106683,16.0113188453987,18.3170265146174,20.132479242174,14.4481665494777,13.8551937800421,14.9255971708778,10.5013767981662,17.7148156405436,16.2655573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|short_description=p2@Nedd8
|short_description=p2@Nedd8
}}
}}

Revision as of 03:51, 18 April 2012

Short description:p2@Nedd8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nedd8_5end
Coexpression cluster:NA
Association with transcript: -158bp_to_ENSMUST00000010520, NM_008683, uc007uac.1_5end
EntrezGene:Nedd8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nedd8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I515.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.28
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.59
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E718.44
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F217.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E664.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F151.37
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.29
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.53
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A128.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A323.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A232.33
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A432.08
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A633.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H226.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I942.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D124.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D224.55
GP2+ M cell, pool1.CNhs13228.11845-124H915.50
GP2+ M cell, pool2.CNhs13231.11846-124I117.66
GP2+ M cell, pool3.CNhs13240.11847-124I219.18
Ileum epithelium, pool1.CNhs13199.10252-104B916.15
Ileum epithelium, pool2.CNhs13232.10253-104C120.16
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C829.05
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I324.13
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F626.93
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F725.52
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H119.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H214.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.98
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.31
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.34
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B735.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C237.28
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B829.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C324.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C417.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C431.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A229.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A124.53
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C119.55
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C334.60
Mouse Granule cells, donor2.CNhs12357.11731-123E330.15
Mouse Granule cells, donor3.CNhs12108.11636-122C740.57
Mouse Meningeal cells, donor1.CNhs12132.11716-123C642.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D128.46
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C737.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E739.55
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D234.81
Mouse Microglia, donor1.CNhs12629.11718-123C841.64
Mouse Microglia, donor2.CNhs12634.11736-123E859.55
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.36
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.76
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F140.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D541.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D228.54
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F229.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D629.42
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D431.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F430.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E431.27
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E542.21
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.70
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.19
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E132.06
Mouse Schwann, donor1.CNhs12507.11728-123D932.56
Mouse Schwann, donor2.CNhs12573.11746-123F924.79
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.91
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C421.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E330.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.61
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H126.95
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G130.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G233.19
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G334.88
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.22
accessory axillary lymph node, adult.CNhs10475.1063-29H916.05
adrenal gland, adult.CNhs10508.49-24D78.02
adrenal gland, embryo E14.CNhs11038.406-44C525.50
adrenal gland, embryo E16.CNhs11004.1254-43D621.92
adrenal gland, embryo E17.CNhs11043.1263-45I118.22
adrenal gland, embryo E18.CNhs11026.1262-18F521.25
adrenal gland, neonate N00.CNhs11191.1311-23C116.58
adrenal gland, neonate N25.CNhs11223.1377-27I312.44
amnion, adult pregnant day17.5.CNhs10488.583-22A812.61
aorta, adult.CNhs10498.46-23H14.63
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F513.26
bone (os femoris), neonate N16.CNhs11225.1525-43A611.93
bone (os femoris), neonate N20.CNhs11195.1350-25C320.85
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B211.42
cerebellum, neonate N30.CNhs11135.1395-42I213.82
colon, adult.CNhs10468.36-18H716.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D151.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D428.97
corpora quadrigemina, adult.CNhs10501.16-22A413.63
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F120.23
cortex, adult.CNhs10473.12-14D515.47
cortex, neonate N30.CNhs11107.1392-42F218.41
diencephalon, adult.CNhs10482.20-12F220.36
diencephalon, neonate N30.CNhs11201.1388-42B219.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.54
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.57
epididymis, adult.CNhs10490.58-23B216.68
eyeball, adult.CNhs10484.31-12G45.47
eyeball, embryo E12.CNhs11016.345-16C619.78
eyeball, embryo E14.CNhs10521.399-16E224.37
eyeball, embryo E15.CNhs10593.426-16C918.91
eyeball, embryo E17.CNhs11023.1261-18D415.22
eyeball, neonate N00.CNhs11207.633-15C611.43
eyeball, neonate N01.CNhs11140.1532-43E715.76
eyeball, neonate N02.CNhs11205.1551-44G815.55
eyeball, neonate N16.CNhs11188.777-19A28.02
forelimb, embryo E11.CNhs10596.335-25E232.12
forelimb, embryo E12.CNhs10600.359-14H219.48
forelimb, embryo E13.CNhs10589.384-1E219.53
forelimb, embryo E14.CNhs10577.413-26A821.70
forelimb, embryo E15.CNhs11007.437-20E79.73
forelimb, embryo E17.CNhs10598.1517-43C49.75
forelimb, embryo E18.CNhs11008.1520-43B511.32
gonad, embryo E13.CNhs11044.1564-45I619.51
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C846.35
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D244.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D527.85
heart, embryo E11.CNhs10586.331-24E923.61
heart, embryo E12.CNhs11015.353-12F520.64
heart, embryo E13.CNhs11013.376-3I928.99
heart, embryo E14.CNhs10597.403-26D421.54
heart, embryo E15.CNhs11017.431-16C818.50
heart, embryo E16.CNhs11021.457-17C622.06
heart, embryo E17.CNhs11025.479-18E515.35
heart, embryo E18.CNhs11030.1283-20G319.85
heart, neonate N00.CNhs11213.639-21E317.28
heart, neonate N03.CNhs11221.1349-25I218.60
heart, neonate N10.CNhs11118.749-24G115.10
heart, neonate N16.CNhs11209.782-15G18.27
heart, neonate N20.CNhs11127.821-26I611.26
heart, neonate N25.CNhs11196.1351-25D37.03
heart, neonate N30.CNhs11202.1390-42D211.68
hippocampus, adult.CNhs10478.13-16E815.77
hippocampus, neonate N00.CNhs11228.627-43G117.60
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A317.72
intestine, embryo E12.CNhs11019.1251-16I521.97
intestine, embryo E13.CNhs11010.381-16D523.92
intestine, embryo E15.CNhs10602.976-16D815.59
intestine, embryo E16.CNhs10585.463-22H413.11
intestine, embryo E17.CNhs10582.482-18D314.01
intestine, embryo E18.CNhs10526.1289-20F714.65
intestine, neonate N00.CNhs11126.644-26D111.86
intestine, neonate N01.CNhs11192.1322-23E912.85
intestine, neonate N06.CNhs11102.688-20B814.07
intestine, neonate N07.CNhs11095.720-20F216.31
intestine, neonate N10.CNhs11098.755-23A510.72
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E312.32
intestine, neonate N30.CNhs11131.1384-42G111.35
kidney, embryo E14.CNhs10606.411-4I931.67
kidney, embryo E15.CNhs10997.434-16F822.62
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I217.72
kidney, embryo E18.CNhs11001.1288-20C710.67
kidney, neonate N00.CNhs11214.646-21G710.94
kidney, neonate N10.CNhs11206.758-6D58.60
kidney, neonate N20.CNhs11113.832-19I16.94
kidney, neonate N25.CNhs11122.1353-25F38.01
kidney, neonate N30.CNhs11203.1385-42H16.05
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F821.19
liver, embryo E13.CNhs10524.378-3H618.08
liver, embryo E14.CNhs10594.409-16E120.46
liver, embryo E15.CNhs10520.433-16D715.01
liver, embryo E16.CNhs10523.462-17F512.54
liver, embryo E17.CNhs10510.481-18A312.99
liver, embryo E18.CNhs10579.499-43G48.92
liver, neonate N00.CNhs11117.641-24F410.54
liver, neonate N03.CNhs11123.1345-25G212.36
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B910.61
liver, neonate N20.CNhs11220.823-25A38.34
liver, neonate N25.CNhs11198.1368-26H18.97
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B17.57
lung, embryo E12.CNhs10522.354-16G223.69
lung, embryo E14.CNhs10604.404-26F815.48
lung, embryo E15.CNhs11020.432-17C523.42
lung, embryo E16.CNhs10998.458-17B619.71
lung, embryo E17.CNhs10605.480-44A612.23
lung, embryo E18.CNhs10583.1287-20I612.38
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E510.72
lung, neonate N07.CNhs11111.715-19A311.29
lung, neonate N10.CNhs11219.750-23E611.16
lung, neonate N20.CNhs11109.822-18A49.67
lung, neonate N25.CNhs11119.1359-25C710.02
lung, neonate N30.CNhs11133.1394-42H28.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.95
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C220.55
medulla oblongata, neonate N30.CNhs11200.1396-42A320.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.60
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.34
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E232.02
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D721.03
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.83
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.95
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I78.94
ovary, embryo E18.CNhs11040.505-44H717.81
ovary, neonate N00.CNhs11217.1299-22I415.64
oviduct, adult pregnant day01.CNhs10500.988-6G68.41
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F424.04
pancreas, embryo E15.CNhs11042.1556-45F227.21
pancreas, embryo E16.CNhs11003.460-26E516.60
pancreas, embryo E17.CNhs10599.1558-45G310.93
pancreas, embryo E18.CNhs10580.1535-43I78.61
pancreas, neonate N00.CNhs11105.645-26G914.21
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E621.61
pituitary gland, embryo E13.CNhs11009.370-44C723.41
pituitary gland, embryo E14.CNhs11037.398-44A513.72
pituitary gland, embryo E15.CNhs10592.427-16B914.01
pituitary gland, embryo E16.CNhs11036.449-43F614.27
pituitary gland, embryo E17.CNhs11039.1265-44F513.82
pituitary gland, neonate N00.CNhs11190.1308-22E911.87
placenta, adult pregnant day10.CNhs10472.539-13I718.07
placenta, adult pregnant day17.CNhs10464.577-18G312.92
prostate, adult.CNhs10470.859-1F89.92
skin, adult.CNhs10492.30-1C38.41
skin, neonate N00.CNhs11124.650-25G48.23
skin, neonate N03.CNhs11215.662-22H39.35
skin, neonate N06.CNhs11097.693-20I511.10
skin, neonate N10.CNhs11108.762-6C49.36
small intestine, neonate N16.CNhs11114.790-21I111.08
spinal cord, adult.CNhs10505.24-13C919.47
spleen, adult.CNhs10465.25-2G214.87
spleen, embryo E16.CNhs11035.461-43C115.07
spleen, embryo E18.CNhs11011.1271-21F220.37
spleen, neonate N10.CNhs11116.752-24D116.01
spleen, neonate N20.CNhs11112.824-19H118.32
spleen, neonate N25.CNhs11099.1354-25G320.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.93
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E317.71
stomach, embryo E15.CNhs10603.1252-16G816.27
stomach, embryo E16.CNhs11022.459-17D418.25
stomach, embryo E17.CNhs11006.1035-18D513.17
stomach, embryo E18.CNhs10999.1286-20C616.38
stomach, neonate N03.CNhs11193.1340-24B89.17
stomach, neonate N07.CNhs11210.718-18A99.17
stomach, neonate N25.CNhs11104.1355-25E410.47
stomach, neonate N30.CNhs11134.1386-42I112.83
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G578.92
testis, embryo E13.CNhs11031.389-23F518.09
testis, embryo E15.CNhs11034.443-27C522.01
testis, embryo E16.CNhs11033.470-26G515.75
testis, embryo E17.CNhs11029.486-18I520.92
testis, embryo E18.CNhs11027.503-18G516.90
testis, neonate N00.CNhs11189.1300-22B716.78
testis, neonate N07.CNhs11222.726-26I425.00
testis, neonate N10.CNhs11204.763-44D939.11
testis, neonate N20.CNhs11110.839-18H367.89
testis, neonate N30.CNhs11130.1391-42E245.80
thymus, adult.CNhs10471.38-12B522.44
thymus, embryo E14.CNhs11041.402-44I429.60
thymus, embryo E15.CNhs11005.430-45I227.94
thymus, embryo E16.CNhs11002.456-26C532.61
thymus, embryo E17.CNhs10581.478-18C125.42
thymus, embryo E18.CNhs10595.1273-19G424.04
thymus, neonate N02.CNhs11181.1541-43F826.68
thymus, neonate N03.CNhs11137.2104-43C726.73
thymus, neonate N06.CNhs11197.681-26C427.16
thymus, neonate N07.CNhs11211.713-19D326.98
thymus, neonate N10.CNhs11194.748-24E423.09
thymus, neonate N20.CNhs11186.820-7A221.93
thymus, neonate N25.CNhs11125.1362-25G720.78
thymus, neonate N30.CNhs11132.1393-42G218.47
tongue, adult.CNhs10499.32-1B48.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H387.24
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7104.52
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G576.89
urinary bladder, adult.CNhs10481.879-12E48.31
uterus, adult pregnant day19.CNhs10497.590-15F59.20
uterus, adult.CNhs10509.92-27E58.79
vagina, adult.CNhs10502.89-27D59.86
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.93
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A232.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.64
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.94
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A523.42
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A628.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.84
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A928.48
whole body, embryo E11.CNhs11014.324-5I833.63
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H217.41
whole body, embryo E14.5.CNhs10578.420-27D213.61
whole body, embryo E14.CNhs10519.395-14B125.36
whole body, embryo E16.CNhs10514.453-14F219.12
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.21
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.34
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.47
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.73
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.13
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.63
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.41
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.45
whole body, embryo E17.5.CNhs10513.490-9F913.12
whole body, embryo E17.CNhs10517.475-3I511.99
whole body, embryo E18.CNhs10516.493-3B310.06
whole body, neonate N00.CNhs10525.657-19C211.60
whole body, neonate N01.CNhs10576.659-23C68.61
whole body, neonate N06.CNhs10515.692-21D113.01
whole body, neonate N10.CNhs10518.761-6B413.22





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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