Personal tools

FFCP PHASE1:Mm9::chr16:93683429..93683468,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Cbr3_5end
|description=CAGE_peak_1_at_Cbr3_5end
|id=chr16:93683429..93683468,+
|id=chr16:93683429..93683468,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=10.2495262147068,0.348975407639361,0.909998478779072,0.30246421130683,0.500895729946347,1.34303417529512,1.63528848416868,0.129123323441576,0.703943610758334,0.70219357896598,0.68487187290202,0.159544317990673,0,0,0.333109761815663,1.61980213911861,2.09868563438444,0.157731082679119,0.548457734422955,0.42438965179803,4.33720779770456,0.297872853602656,0.783599367416806,1.27993938234725,1.60586496747019,1.14846392823004,2.15380998079537,0.861884930743556,0,0.252030129759931,3.76941868114018,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0.485510353031154,23.2909113254818,20.3767631751224,13.9495531642878,21.1245662973971,10.0291571935005,12.5221124158649,15.748821825017,16.7983705950435,18.6878333674463,0,0,0,12.0911934936895,13.1805382371828,13.4074743992135,0.809265843438391,1.05798195854407,1.26766280701236,14.2314703469035,16.0073063300005,35.5460388326153,27.6882581518753,31.2611250576284,17.3768064100675,20.3635701820424,0,0.540023753326763,0,6.28432165688368,4.63823935998388,0.367472397644862,0.191690942036473,0.919218786610021,6.60695285996332,2.042997409363,2.15049146558741,0.659431438650969,1.00636407962651,1.56274011167028,3.62937898701795,4.50210088025344,2.44477196442896,3.53554302568401,3.55929201997757,1.4911955666024,3.3319525066601,5.2144376473682,8.40607017234866,3.44169550792555,0,0.539703191637817,1.94932925234301,0.448026887097336,3.93244376368905,13.1231348385104,18.9643783360094,13.4269038313929,5.35204995151386,17.9657068380045,2.54805239706646,14.2213340630666,13.4224445426953,15.2015919285059,18.1988800205322,2.39786147410026,1.55362730188303,5.04703272820404,1.73485326766136,0.913396434936424,1.84492397804847,2.11011696773672,2.70454026412121,3.64433114856059,0.988779870937496,5.06097749219691,4.42305275974937,1.45590164952668,1.10420759230197,1.45462575940567,14.9113408974498,0.585561594023094,0.83778682725382,3.57639877292028,0.479260498023681,1.19980546198682,0.762421362438388,2.39665023047716,18.3000241127451,0.753926112677186,6.08385120672968,4.85859368927628,3.1168206683934,5.19172041816825,2.13862664085664,4.85187185379363,15.1633655060205,3.57751155007006,0.520481771850815,1.37941262660084,0.360124259610698,1.80845781402858,1.15662048557257,1.92170580427275,1.59292931751539,3.62184719034622,0.215567992932842,0.756424320671277,0.703804496655795,0.43839146485515,2.50242524303038,5.2237824978325,10.906453229621,1.79130840136644,0,0.51469581422943,0.852490498186778,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.308534225774757,0.232533944750408,0.536546802799238,0.934122738937356,0.822799249567402,2.29834449710733,1.62137619091711,2.04679982395465,2.41505126820156,2.14730270016595,4.83666881697493,2.05809224758569,12.8863325363681,0.528901133327089,0.426576501070468,0.464473343720877,0.644337306610467,0.605050573870028,1.55664630691409,0.760902504450237,3.32170343081158,4.11747386810027,3.51869292320377,4.77495532898762,5.06906626509712,0.898819408654221,7.78096979548899,9.16049856970089,1.70701110857774,1.5994791765362,1.1270773567308,2.44381593414377,1.74557238450863,2.31448205638051,3.79419222745544,3.09981310757165,3.29697328466887,4.81248939295022,1.1858105083486,0.166845105716094,0,0,0,0.241177159752417,1.01850340712568,0.287696137450811,0.324270453550071,1.09824565275233,2.87536413054709,1.86070473834252,0.936113019343682,1.01031551178845,1.07638448113147,1.92977408545347,6.09685527549795,0.37898282354097,1.30371981153621,1.52770577197669,2.58159273117352,2.84760637651087,4.04674189506223,2.92700471786698,4.88668946729192,5.3151525515706,5.58091690301205,8.68475567993411,5.18054945597687,9.54683786637976,19.6028669121054,23.9318500880232,2.45882136509518,0.827810238914197,2.0871576698413,1.87538698547525,13.2787305755107,4.03953483526997,16.0909191902291,17.5697434933487,17.2338718186239,17.2057534525837,13.3679204449436,11.889214293131,17.0020494703456,14.3205370376543,18.5785255634866,1.60660658210904,4.5420827266646,4.80777129901589,2.93196526836437,9.40329700943452,2.65490276679926,0.728341908464944,1.209294227859,0.565815239267694,2.06711325016541,1.84461088766356,3.87642439752332,2.90826983582004,3.20847640546249,1.58018378967908,2.10837217149998,2.06271086496374,2.7235168460303,0.900305470156551,1.4229455216103,0.214337035031592,0.532020700926821,0.891844088010353,1.81003922662333,0.913394847343798,1.64270195644597,1.0591603543191,6.3953235435939,6.26567761177624,12.7556897089765,7.29786391630686,8.11731939221328,6.56563598980245,2.33184669303881,2.22510362412612,1.87957968877638,1.44470807574256,2.22233432843654,1.31857919903284,1.0935538217682,2.28778173206523,1.69978429993855,1.11961161858926,1.38199973804424,39.1414953386197,0.474503990371703,2.43983360552218,9.72048067396211,17.3543285692009,24.0198820120795,15.779128527024,14.8776220305605,41.0956828914927,29.6818288838206,1.86401793926078,1.12738587736838,1.64468200648377,2.31641886639937,3.11121901350476,2.58319646955462,2.02747350588934,2.11243029562357,1.8228613878153,0.524296722128554,0.483168241652012,1.15212002503146,2.8441000856536,0.810900861160657,1.54066435747241,1.94881234466693,0.537080087002444,1.39076948346885,1.80293174279953,2.06765338044408,1.51449674922221,1.5241361331,1.41156659191577,0.877120926657772,0.769694733122636,1.5193997283604,19.7255433745234,4.88369097422942,1.88399098879899,4.02923079273788,8.69353173144857,5.44279178808428,7.50921659495787,21.6512062869857,3.00943262421218,4.51801474093653,2.76195141904306,2.86447756719698,2.40594455281163,5.48066015816514,3.0215755895588,4.72515750162264,7.20513925158753,4.98456649882625,3.10656187051092,0.207574695168353,1.19707462020309,1.53660245178721,3.8897074730927,2.30574478890781,6.80220981265052,2.22246727801615,4.32673620201678,2.56735367673452,3.28506375292937,3.04175159868288,3.39527414494937,2.62196220915671,2.43295579138503,2.23998328926892,1.42888107384922,2.0859178670074,3.27945674788299,3.29668720642645,4.41596760403192,2.40008476669791,3.54951612318675,1.66905332963125,3.77900683244054,2.07040636913727,3.21535509988371,2.19513567447327,2.36762740294059,2.8518863907631,3.36685362994643,3.32178050747688,2.9551344712669,4.50154147486658,3.25367366490529,5.5942917184531,9.242991383704,3.74290573512653,6.23126056740065,5.35607329792761,4.19123696327079,6.26043156175138
|phase1_expression=10.2495262147068,0.348975407639361,0.909998478779072,0.30246421130683,0.500895729946347,1.34303417529512,1.63528848416868,0.129123323441576,0.703943610758334,0.70219357896598,0.68487187290202,0.159544317990673,0,0,0.333109761815663,1.61980213911861,2.09868563438444,0.157731082679119,0.548457734422955,0.42438965179803,4.33720779770456,0.297872853602656,0.783599367416806,1.27993938234725,1.60586496747019,1.14846392823004,2.15380998079537,0.861884930743556,0,0.252030129759931,3.76941868114018,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0,0,0,0,0,0.485510353031154,23.2909113254818,20.3767631751224,13.9495531642878,21.1245662973971,10.0291571935005,12.5221124158649,15.748821825017,16.7983705950435,18.6878333674463,0,0,0,12.0911934936895,13.1805382371828,13.4074743992135,0.809265843438391,1.05798195854407,1.26766280701236,14.2314703469035,16.0073063300005,35.5460388326153,27.6882581518753,31.2611250576284,17.3768064100675,20.3635701820424,0,0.540023753326763,0,6.28432165688368,4.63823935998388,0.367472397644862,0.191690942036473,0.919218786610021,6.60695285996332,2.042997409363,2.15049146558741,0.659431438650969,1.00636407962651,1.56274011167028,3.62937898701795,4.50210088025344,2.44477196442896,3.53554302568401,3.55929201997757,1.4911955666024,3.3319525066601,5.2144376473682,8.40607017234866,3.44169550792555,0,0.539703191637817,1.94932925234301,0.448026887097336,3.93244376368905,13.1231348385104,18.9643783360094,13.4269038313929,5.35204995151386,17.9657068380045,2.54805239706646,14.2213340630666,13.4224445426953,15.2015919285059,18.1988800205322,2.39786147410026,1.55362730188303,5.04703272820404,1.73485326766136,0.913396434936424,1.84492397804847,2.11011696773672,2.70454026412121,3.64433114856059,0.988779870937496,5.06097749219691,4.42305275974937,1.45590164952668,1.10420759230197,1.45462575940567,14.9113408974498,0.585561594023094,0.83778682725382,3.57639877292028,0.479260498023681,1.19980546198682,0.762421362438388,2.39665023047716,18.3000241127451,0.753926112677186,6.08385120672968,4.85859368927628,3.1168206683934,5.19172041816825,2.13862664085664,4.85187185379363,15.1633655060205,3.57751155007006,0.520481771850815,1.37941262660084,0.360124259610698,1.80845781402858,1.15662048557257,1.92170580427275,1.59292931751539,3.62184719034622,0.215567992932842,0.756424320671277,0.703804496655795,0.43839146485515,2.50242524303038,5.2237824978325,10.906453229621,1.79130840136644,0,0.51469581422943,0.852490498186778,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.590292695242212,0.308534225774757,0.232533944750408,0.536546802799238,0.934122738937356,0.822799249567402,2.29834449710733,1.62137619091711,2.04679982395465,2.41505126820156,2.14730270016595,4.83666881697493,2.05809224758569,12.8863325363681,0.528901133327089,0.426576501070468,0.464473343720877,0.644337306610467,0.605050573870028,1.55664630691409,0.760902504450237,3.32170343081158,4.11747386810027,3.51869292320377,4.77495532898762,5.06906626509712,0.898819408654221,7.78096979548899,9.16049856970089,1.70701110857774,1.5994791765362,1.1270773567308,2.44381593414377,1.74557238450863,2.31448205638051,3.79419222745544,3.09981310757165,3.29697328466887,4.81248939295022,1.1858105083486,0.166845105716094,0,0,0,0.241177159752417,1.01850340712568,0.287696137450811,0.324270453550071,1.09824565275233,2.87536413054709,1.86070473834252,0.936113019343682,1.01031551178845,1.07638448113147,1.92977408545347,6.09685527549795,0.37898282354097,1.30371981153621,1.52770577197669,2.58159273117352,2.84760637651087,4.04674189506223,2.92700471786698,4.88668946729192,5.3151525515706,5.58091690301205,8.68475567993411,5.18054945597687,9.54683786637976,19.6028669121054,23.9318500880232,2.45882136509518,0.827810238914197,2.0871576698413,1.87538698547525,13.2787305755107,4.03953483526997,16.0909191902291,17.5697434933487,17.2338718186239,17.2057534525837,13.3679204449436,11.889214293131,17.0020494703456,14.3205370376543,18.5785255634866,1.60660658210904,4.5420827266646,4.80777129901589,2.93196526836437,9.40329700943452,2.65490276679926,0.728341908464944,1.209294227859,0.565815239267694,2.06711325016541,1.84461088766356,3.87642439752332,2.90826983582004,3.20847640546249,1.58018378967908,2.10837217149998,2.06271086496374,2.7235168460303,0.900305470156551,1.4229455216103,0.214337035031592,0.532020700926821,0.891844088010353,1.81003922662333,0.913394847343798,1.64270195644597,1.0591603543191,6.3953235435939,6.26567761177624,12.7556897089765,7.29786391630686,8.11731939221328,6.56563598980245,2.33184669303881,2.22510362412612,1.87957968877638,1.44470807574256,2.22233432843654,1.31857919903284,1.0935538217682,2.28778173206523,1.69978429993855,1.11961161858926,1.38199973804424,39.1414953386197,0.474503990371703,2.43983360552218,9.72048067396211,17.3543285692009,24.0198820120795,15.779128527024,14.8776220305605,41.0956828914927,29.6818288838206,1.86401793926078,1.12738587736838,1.64468200648377,2.31641886639937,3.11121901350476,2.58319646955462,2.02747350588934,2.11243029562357,1.8228613878153,0.524296722128554,0.483168241652012,1.15212002503146,2.8441000856536,0.810900861160657,1.54066435747241,1.94881234466693,0.537080087002444,1.39076948346885,1.80293174279953,2.06765338044408,1.51449674922221,1.5241361331,1.41156659191577,0.877120926657772,0.769694733122636,1.5193997283604,19.7255433745234,4.88369097422942,1.88399098879899,4.02923079273788,8.69353173144857,5.44279178808428,7.50921659495787,21.6512062869857,3.00943262421218,4.51801474093653,2.76195141904306,2.86447756719698,2.40594455281163,5.48066015816514,3.0215755895588,4.72515750162264,7.20513925158753,4.98456649882625,3.10656187051092,0.207574695168353,1.19707462020309,1.53660245178721,3.8897074730927,2.30574478890781,6.80220981265052,2.22246727801615,4.32673620201678,2.56735367673452,3.28506375292937,3.04175159868288,3.39527414494937,2.62196220915671,2.43295579138503,2.23998328926892,1.42888107384922,2.0859178670074,3.27945674788299,3.29668720642645,4.41596760403192,2.40008476669791,3.54951612318675,1.66905332963125,3.77900683244054,2.07040636913727,3.21535509988371,2.19513567447327,2.36762740294059,2.8518863907631,3.36685362994643,3.32178050747688,2.9551344712669,4.50154147486658,3.25367366490529,5.5942917184531,9.242991383704,3.74290573512653,6.23126056740065,5.35607329792761,4.19123696327079,6.26043156175138
|short_description=p1@Cbr3
|short_description=p1@Cbr3
}}
}}

Revision as of 07:17, 18 April 2012

Short description:p1@Cbr3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cbr3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000039620, NM_173047, uc007zzs.2_5end
EntrezGene:Cbr3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cbr3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.38
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.95
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.03
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.52
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.18
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C735.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E727.69
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D231.26
Mouse Microglia, donor1.CNhs12629.11718-123C817.38
Mouse Microglia, donor2.CNhs12634.11736-123E820.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D93.33
Mouse Schwann, donor2.CNhs12573.11746-123F95.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.41
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E318.96
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.20
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D75.05
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C12.70
adrenal gland, neonate N25.CNhs11223.1377-27I33.64
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D818.30
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.85
epididymis, adult.CNhs10490.58-23B215.16
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B510.91
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G11.62
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I312.89
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F24.77
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E37.78
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D53.79
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H14.81
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B16.10
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A48.68
lung, neonate N25.CNhs11119.1359-25C75.18
lung, neonate N30.CNhs11133.1394-42H29.55
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.93
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.57
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.21
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.89
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.32
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.58
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H74.81
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G69.40
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F86.40
skin, adult.CNhs10492.30-1C36.27
skin, neonate N00.CNhs11124.650-25G412.76
skin, neonate N03.CNhs11215.662-22H37.30
skin, neonate N06.CNhs11097.693-20I58.12
skin, neonate N10.CNhs11108.762-6C46.57
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H639.14
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D49.72
stomach, embryo E17.CNhs11006.1035-18D517.35
stomach, embryo E18.CNhs10999.1286-20C624.02
stomach, neonate N03.CNhs11193.1340-24B815.78
stomach, neonate N07.CNhs11210.718-18A914.88
stomach, neonate N25.CNhs11104.1355-25E441.10
stomach, neonate N30.CNhs11134.1386-42I129.68
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C72.07
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B419.73
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E48.69
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E57.51
vagina, adult.CNhs10502.89-27D521.65
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F95.59
whole body, embryo E17.CNhs10517.475-3I59.24
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:93683429..93683468,%2B&oldid=842255"