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FFCP PHASE1:Mm9::chr1:7079079..7079158,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:7079079..7079158,+
|short_description=p1@Pcmtd1
|description=CAGE_peak_1_at_Pcmtd1_5end
|association_with_transcript=78bp_to_ENSMUST00000061280,ENSMUST00000172291,NM_183028,uc007agb.1,uc007agc.1,uc011why.1_5end
|EntrezGene=319263
|EntrezGene=319263
|HGNC=
|HGNC=
|UniProt=P59913,E9QAJ0,Q3TGS5,Q3TSP0,D3Z0C8
|UniProt=P59913,E9QAJ0,Q3TGS5,Q3TSP0,D3Z0C8
|association_with_transcript=78bp_to_ENSMUST00000061280,ENSMUST00000172291,NM_183028,uc007agb.1,uc007agc.1,uc011why.1_5end
|description=CAGE_peak_1_at_Pcmtd1_5end
|id=chr1:7079079..7079158,+
|ontology_enrichment_disease=
|phase1_expression=17.9366708757369,8.02643437570531,10.0099832665698,19.9626379462508,14.5259761684441,9.40123922706583,7.2419918584613,26.9867745992894,7.03943610758334,7.0219357896598,5.47897498321616,4.14815226775749,23.6257007305064,19.1450681297604,13.3243904726265,11.9460407759997,8.39474253753776,25.236973228659,31.5363197293199,27.1609377150739,15.3077922271926,10.3262589248921,7.05239430675126,9.91953021319121,10.782236210157,5.16808767703518,9.47676391549965,7.54149314400612,12.3515222646643,10.837295579677,5.54326276638262,3.81018404075779,4.30545351309199,0,8.66554859253824,6.81562045969819,7.75843553797003,22.1821764290561,14.0640362014284,16.7527598071615,21.1763335691165,28.0048648832963,17.4783727091215,24.1721890513108,26.6621329107323,18.5382219683298,3.9119567217402,4.14247797122848,3.95435128922049,12.0546537426056,6.43937539476668,4.31257693094915,27.1807821813533,31.1905721064878,33.6093799142464,4.63066984864705,12.3209379173665,13.4074743992135,13.5552028775931,6.87688273053643,9.50747105259269,3.04960078862219,7.11435836888911,6.74924787961049,5.93319817540185,4.2628806896766,4.19440154725767,4.2264013585371,6.42875596312561,5.53524347159932,6.30974884054146,12.8542942981712,13.693849539,9.79926393719632,4.88811902193005,7.35375029288017,37.4393995397922,32.1772091974673,39.1696659803421,10.4190167306853,8.05091263701205,11.4600941522487,27.080750903134,32.6402313818374,32.0876320331301,20.9186295686304,19.362548588678,15.4711540034999,8.93569081331572,13.376166138901,41.7404863730416,18.0689014166091,8.83962733820076,43.1762553310254,70.8256295017959,81.0928665646177,24.9991067834518,12.1005529030421,4.67614808285164,9.89350808628953,21.8307300653855,29.5150898052931,35.6727335589304,35.5533351576666,10.6080610095495,11.1478340809043,11.1215377903252,30.2587281255509,34.9566142923682,26.1258164754092,8.50078101154066,10.3518262626128,14.5287763271317,11.3041980414467,16.8151851204058,26.6413173618912,10.6293836125781,57.6951434110447,12.3845477272982,12.9413479957927,18.9923705875938,19.3950101254089,26.0948465705371,50.0655162889746,42.5176814831314,15.5828803677241,6.35020159881377,5.39912457894067,4.44745794755726,37.4476598512057,28.8225379775735,6.91098936620754,34.2433910778785,33.7544403676036,30.1292664611362,24.3361894601636,19.2476397677098,22.8908825922571,48.2700468608319,30.9349528153117,11.3204785377552,12.1848115349741,14.4049703844279,16.5775299619287,21.0232782377603,19.601399203582,22.3010104452155,27.9399640398137,6.89817577385095,12.6701073712439,12.1406275673125,7.67185063496512,11.9560317167007,23.6811473235073,22.2244707320579,22.4908721504897,4.91549231119264,3.3455227924913,7.10408748488982,13.0489236697366,10.5536726991493,12.42428224081,14.4414288706978,16.1346670032871,16.6608481918369,14.6496385192757,11.8040296615832,19.966873544786,15.3040660419537,21.9984401865988,22.9424731014772,26.9007976862611,28.3219648725455,27.2439030083555,32.8052319760039,11.3195073617213,28.7464341195904,12.4291766331866,11.9441420299731,11.8440702648824,15.206360436007,14.9245808221273,18.0126215514345,11.9842144450912,16.6085171540579,14.658206970437,15.834118154417,19.4977342600328,16.5719474051252,16.178749355776,18.5878722892237,18.1218558661474,3.98302592001472,12.9100819248994,12.3978509240388,17.1067115390064,16.0980564349129,17.4638191526893,27.5078936490519,20.9606410131035,29.5157608341785,24.8028299482819,33.4991468608478,9.17648081438517,8.84515478009414,5.39669069723649,9.53442570525964,12.0588579876208,14.0044218479781,19.2756412092043,24.6445544698054,18.6701760967895,12.9391385874619,20.8398930694362,20.9065240986756,25.5104666726583,36.0588801179044,41.4901428372496,38.4286635546538,11.7484675297701,12.87423313892,11.0334305753872,12.2038929110021,17.253144516507,17.139142143793,21.8549685600735,23.3300013277163,22.589398344175,24.874943910568,31.4617564254217,28.8383919716046,22.9992003144603,12.0633027151418,17.9488875660174,27.047035016047,22.3508764506833,37.4082874671555,37.9765864558738,15.0820149746541,28.5292147740941,26.5026904309656,19.1314984705353,24.1274205460735,18.8785350382516,17.8238939265915,22.3630459323178,20.2405350837447,23.380468632905,28.4607200121497,24.0990987316355,24.9814549966553,10.6839362200353,18.5691133663077,32.8290544715346,55.7529581027844,14.3240575331439,12.9999129494843,32.0628635585027,25.986566573508,40.5814395285984,29.4608254211772,30.900367005588,30.658774541086,44.2451461110142,73.7930260024991,49.5050607591297,37.7887962386705,14.5849486165361,3.62204314591713,7.93047029616891,16.3153014950892,10.3453914209201,13.1639216481697,4.26250928760439,5.86679270159276,11.4389318266463,38.8129980576733,40.0673594647796,24.8655217111695,28.0455100915925,21.4870219205646,25.1135576609944,18.9462543809403,40.9789917443226,14.5240248678175,12.5895989457566,13.3340059706192,11.3021074202815,12.4391747226133,10.5237959675,10.8786195196067,11.1961161858926,11.3323978519628,18.1387417422872,10.7554237817586,16.062237903021,18.7929293029934,18.1906817532588,19.8709933009022,19.0158728402597,27.4409473008115,25.6520823144349,21.6457005397294,60.8912526825187,5.07323644815771,15.5497207885738,9.76205093696876,14.7782903141476,9.68698676082983,15.20605129417,19.5986588538409,27.4731252020735,23.5933524957849,10.8712854371703,11.2331702440568,23.3848229264852,6.89265731986558,10.681939545142,14.6810529964908,13.4270021750611,14.5037388990323,12.6205221995967,9.89519832069667,10.2985778947111,9.14481679859998,8.87270429204197,14.2288505880039,15.1052591375317,17.4146584250538,41.7183905851989,5.10567692760349,6.81825310232015,5.70807695637867,28.9784391048286,27.2139589404214,25.8243790216844,32.583993620018,48.1509219873949,19.2015626489803,16.1113832777512,19.4784474569395,28.3557750867085,35.6242910280734,34.7481192799262,28.3509450097358,30.621841819247,38.9702471726416,36.2432218226274,10.3787347584177,13.5668456956351,11.6098851912811,14.3432963070293,11.1094976192831,14.8913241844511,17.7797382241292,13.8043488350059,18.2923949467335,21.9846574234504,21.2922611907801,22.8237873077152,18.8219430014464,21.064275141202,19.4706239759529,24.2909782554368,19.9321040625151,21.605832691935,23.0768104449852,18.2526660966653,22.6293706574374,20.9421451268018,18.1211504359964,22.9647338279079,25.4095327121393,21.4074957965942,18.8415812058956,17.8887403777733,20.0990088491875,23.567975409625,22.8965584979656,21.2769681931217,21.2800142448238,24.6349577485686,20.0622875420387,11.9909077410214,22.92529762765,17.1896843238639,14.9204899013698,18.7502706251588,23.650519233283
|phase1_expression=17.9366708757369,8.02643437570531,10.0099832665698,19.9626379462508,14.5259761684441,9.40123922706583,7.2419918584613,26.9867745992894,7.03943610758334,7.0219357896598,5.47897498321616,4.14815226775749,23.6257007305064,19.1450681297604,13.3243904726265,11.9460407759997,8.39474253753776,25.236973228659,31.5363197293199,27.1609377150739,15.3077922271926,10.3262589248921,7.05239430675126,9.91953021319121,10.782236210157,5.16808767703518,9.47676391549965,7.54149314400612,12.3515222646643,10.837295579677,5.54326276638262,3.81018404075779,4.30545351309199,0,8.66554859253824,6.81562045969819,7.75843553797003,22.1821764290561,14.0640362014284,16.7527598071615,21.1763335691165,28.0048648832963,17.4783727091215,24.1721890513108,26.6621329107323,18.5382219683298,3.9119567217402,4.14247797122848,3.95435128922049,12.0546537426056,6.43937539476668,4.31257693094915,27.1807821813533,31.1905721064878,33.6093799142464,4.63066984864705,12.3209379173665,13.4074743992135,13.5552028775931,6.87688273053643,9.50747105259269,3.04960078862219,7.11435836888911,6.74924787961049,5.93319817540185,4.2628806896766,4.19440154725767,4.2264013585371,6.42875596312561,5.53524347159932,6.30974884054146,12.8542942981712,13.693849539,9.79926393719632,4.88811902193005,7.35375029288017,37.4393995397922,32.1772091974673,39.1696659803421,10.4190167306853,8.05091263701205,11.4600941522487,27.080750903134,32.6402313818374,32.0876320331301,20.9186295686304,19.362548588678,15.4711540034999,8.93569081331572,13.376166138901,41.7404863730416,18.0689014166091,8.83962733820076,43.1762553310254,70.8256295017959,81.0928665646177,24.9991067834518,12.1005529030421,4.67614808285164,9.89350808628953,21.8307300653855,29.5150898052931,35.6727335589304,35.5533351576666,10.6080610095495,11.1478340809043,11.1215377903252,30.2587281255509,34.9566142923682,26.1258164754092,8.50078101154066,10.3518262626128,14.5287763271317,11.3041980414467,16.8151851204058,26.6413173618912,10.6293836125781,57.6951434110447,12.3845477272982,12.9413479957927,18.9923705875938,19.3950101254089,26.0948465705371,50.0655162889746,42.5176814831314,15.5828803677241,6.35020159881377,5.39912457894067,4.44745794755726,37.4476598512057,28.8225379775735,6.91098936620754,34.2433910778785,33.7544403676036,30.1292664611362,24.3361894601636,19.2476397677098,22.8908825922571,48.2700468608319,30.9349528153117,11.3204785377552,12.1848115349741,14.4049703844279,16.5775299619287,21.0232782377603,19.601399203582,22.3010104452155,27.9399640398137,6.89817577385095,12.6701073712439,12.1406275673125,7.67185063496512,11.9560317167007,23.6811473235073,22.2244707320579,22.4908721504897,4.91549231119264,3.3455227924913,7.10408748488982,13.0489236697366,10.5536726991493,12.42428224081,14.4414288706978,16.1346670032871,16.6608481918369,14.6496385192757,11.8040296615832,19.966873544786,15.3040660419537,21.9984401865988,22.9424731014772,26.9007976862611,28.3219648725455,27.2439030083555,32.8052319760039,11.3195073617213,28.7464341195904,12.4291766331866,11.9441420299731,11.8440702648824,15.206360436007,14.9245808221273,18.0126215514345,11.9842144450912,16.6085171540579,14.658206970437,15.834118154417,19.4977342600328,16.5719474051252,16.178749355776,18.5878722892237,18.1218558661474,3.98302592001472,12.9100819248994,12.3978509240388,17.1067115390064,16.0980564349129,17.4638191526893,27.5078936490519,20.9606410131035,29.5157608341785,24.8028299482819,33.4991468608478,9.17648081438517,8.84515478009414,5.39669069723649,9.53442570525964,12.0588579876208,14.0044218479781,19.2756412092043,24.6445544698054,18.6701760967895,12.9391385874619,20.8398930694362,20.9065240986756,25.5104666726583,36.0588801179044,41.4901428372496,38.4286635546538,11.7484675297701,12.87423313892,11.0334305753872,12.2038929110021,17.253144516507,17.139142143793,21.8549685600735,23.3300013277163,22.589398344175,24.874943910568,31.4617564254217,28.8383919716046,22.9992003144603,12.0633027151418,17.9488875660174,27.047035016047,22.3508764506833,37.4082874671555,37.9765864558738,15.0820149746541,28.5292147740941,26.5026904309656,19.1314984705353,24.1274205460735,18.8785350382516,17.8238939265915,22.3630459323178,20.2405350837447,23.380468632905,28.4607200121497,24.0990987316355,24.9814549966553,10.6839362200353,18.5691133663077,32.8290544715346,55.7529581027844,14.3240575331439,12.9999129494843,32.0628635585027,25.986566573508,40.5814395285984,29.4608254211772,30.900367005588,30.658774541086,44.2451461110142,73.7930260024991,49.5050607591297,37.7887962386705,14.5849486165361,3.62204314591713,7.93047029616891,16.3153014950892,10.3453914209201,13.1639216481697,4.26250928760439,5.86679270159276,11.4389318266463,38.8129980576733,40.0673594647796,24.8655217111695,28.0455100915925,21.4870219205646,25.1135576609944,18.9462543809403,40.9789917443226,14.5240248678175,12.5895989457566,13.3340059706192,11.3021074202815,12.4391747226133,10.5237959675,10.8786195196067,11.1961161858926,11.3323978519628,18.1387417422872,10.7554237817586,16.062237903021,18.7929293029934,18.1906817532588,19.8709933009022,19.0158728402597,27.4409473008115,25.6520823144349,21.6457005397294,60.8912526825187,5.07323644815771,15.5497207885738,9.76205093696876,14.7782903141476,9.68698676082983,15.20605129417,19.5986588538409,27.4731252020735,23.5933524957849,10.8712854371703,11.2331702440568,23.3848229264852,6.89265731986558,10.681939545142,14.6810529964908,13.4270021750611,14.5037388990323,12.6205221995967,9.89519832069667,10.2985778947111,9.14481679859998,8.87270429204197,14.2288505880039,15.1052591375317,17.4146584250538,41.7183905851989,5.10567692760349,6.81825310232015,5.70807695637867,28.9784391048286,27.2139589404214,25.8243790216844,32.583993620018,48.1509219873949,19.2015626489803,16.1113832777512,19.4784474569395,28.3557750867085,35.6242910280734,34.7481192799262,28.3509450097358,30.621841819247,38.9702471726416,36.2432218226274,10.3787347584177,13.5668456956351,11.6098851912811,14.3432963070293,11.1094976192831,14.8913241844511,17.7797382241292,13.8043488350059,18.2923949467335,21.9846574234504,21.2922611907801,22.8237873077152,18.8219430014464,21.064275141202,19.4706239759529,24.2909782554368,19.9321040625151,21.605832691935,23.0768104449852,18.2526660966653,22.6293706574374,20.9421451268018,18.1211504359964,22.9647338279079,25.4095327121393,21.4074957965942,18.8415812058956,17.8887403777733,20.0990088491875,23.567975409625,22.8965584979656,21.2769681931217,21.2800142448238,24.6349577485686,20.0622875420387,11.9909077410214,22.92529762765,17.1896843238639,14.9204899013698,18.7502706251588,23.650519233283
|short_description=p1@Pcmtd1
}}
}}

Revision as of 07:32, 18 April 2012

Short description:p1@Pcmtd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pcmtd1_5end
Coexpression cluster:NA
Association with transcript: 78bp_to_ENSMUST00000061280, ENSMUST00000172291, NM_183028, uc007agb.1, uc007agc.1, uc011why.1_5end
EntrezGene:Pcmtd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pcmtd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.40
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.24
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.63
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.15
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.95
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A225.24
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A431.54
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A627.16
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.78
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I19.48
GP2+ M cell, pool3.CNhs13240.11847-124I27.54
Ileum epithelium, pool1.CNhs13199.10252-104B912.35
Ileum epithelium, pool2.CNhs13232.10253-104C110.84
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G822.18
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.75
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G921.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H417.48
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D926.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.05
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A227.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.19
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A133.61
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C313.56
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.43
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.69
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.89
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F332.18
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.17
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E427.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E532.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I632.09
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.92
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.47
Mouse Schwann, donor1.CNhs12507.11728-123D98.94
Mouse Schwann, donor2.CNhs12573.11746-123F913.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G341.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C843.18
Mouse hepatocyte, donor6.CNhs13090.11822-124F470.83
Mouse hepatocyte, donor8.CNhs13091.11824-124F681.09
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.12
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B630.26
accessory axillary lymph node, adult.CNhs10475.1063-29H934.96
adrenal gland, adult.CNhs10508.49-24D726.13
adrenal gland, embryo E14.CNhs11038.406-44C58.50
adrenal gland, embryo E16.CNhs11004.1254-43D610.35
adrenal gland, embryo E17.CNhs11043.1263-45I114.53
adrenal gland, embryo E18.CNhs11026.1262-18F511.30
adrenal gland, neonate N00.CNhs11191.1311-23C116.82
adrenal gland, neonate N25.CNhs11223.1377-27I326.64
amnion, adult pregnant day17.5.CNhs10488.583-22A810.63
aorta, adult.CNhs10498.46-23H157.70
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F512.94
bone (os femoris), neonate N16.CNhs11225.1525-43A618.99
bone (os femoris), neonate N20.CNhs11195.1350-25C319.40
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B250.07
cerebellum, neonate N30.CNhs11135.1395-42I242.52
colon, adult.CNhs10468.36-18H715.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.45
corpora quadrigemina, adult.CNhs10501.16-22A437.45
corpus striatum, adult.CNhs10487.19-21D828.82
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D534.24
cortex, neonate N30.CNhs11107.1392-42F233.75
diencephalon, adult.CNhs10482.20-12F230.13
diencephalon, neonate N30.CNhs11201.1388-42B224.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.25
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.89
epididymis, adult.CNhs10490.58-23B248.27
eyeball, adult.CNhs10484.31-12G430.93
eyeball, embryo E12.CNhs11016.345-16C611.32
eyeball, embryo E14.CNhs10521.399-16E212.18
eyeball, embryo E15.CNhs10593.426-16C914.40
eyeball, embryo E17.CNhs11023.1261-18D416.58
eyeball, neonate N00.CNhs11207.633-15C621.02
eyeball, neonate N01.CNhs11140.1532-43E719.60
eyeball, neonate N02.CNhs11205.1551-44G822.30
eyeball, neonate N16.CNhs11188.777-19A227.94
forelimb, embryo E11.CNhs10596.335-25E26.90
forelimb, embryo E12.CNhs10600.359-14H212.67
forelimb, embryo E13.CNhs10589.384-1E212.14
forelimb, embryo E14.CNhs10577.413-26A87.67
forelimb, embryo E15.CNhs11007.437-20E711.96
forelimb, embryo E17.CNhs10598.1517-43C423.68
forelimb, embryo E18.CNhs11008.1520-43B522.22
gonad, embryo E13.CNhs11044.1564-45I622.49
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E913.05
heart, embryo E12.CNhs11015.353-12F510.55
heart, embryo E13.CNhs11013.376-3I912.42
heart, embryo E14.CNhs10597.403-26D414.44
heart, embryo E15.CNhs11017.431-16C816.13
heart, embryo E16.CNhs11021.457-17C616.66
heart, embryo E17.CNhs11025.479-18E514.65
heart, embryo E18.CNhs11030.1283-20G311.80
heart, neonate N00.CNhs11213.639-21E319.97
heart, neonate N03.CNhs11221.1349-25I215.30
heart, neonate N10.CNhs11118.749-24G122.00
heart, neonate N16.CNhs11209.782-15G122.94
heart, neonate N20.CNhs11127.821-26I626.90
heart, neonate N25.CNhs11196.1351-25D328.32
heart, neonate N30.CNhs11202.1390-42D227.24
hippocampus, adult.CNhs10478.13-16E832.81
hippocampus, neonate N00.CNhs11228.627-43G111.32
intestinal mucosa, adult.CNhs10506.860-29I328.75
intestine, adult.CNhs10496.178-9A312.43
intestine, embryo E12.CNhs11019.1251-16I511.94
intestine, embryo E13.CNhs11010.381-16D511.84
intestine, embryo E15.CNhs10602.976-16D815.21
intestine, embryo E16.CNhs10585.463-22H414.92
intestine, embryo E17.CNhs10582.482-18D318.01
intestine, embryo E18.CNhs10526.1289-20F711.98
intestine, neonate N00.CNhs11126.644-26D116.61
intestine, neonate N01.CNhs11192.1322-23E914.66
intestine, neonate N06.CNhs11102.688-20B815.83
intestine, neonate N07.CNhs11095.720-20F219.50
intestine, neonate N10.CNhs11098.755-23A516.57
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E318.59
intestine, neonate N30.CNhs11131.1384-42G118.12
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F812.91
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I217.11
kidney, embryo E18.CNhs11001.1288-20C716.10
kidney, neonate N00.CNhs11214.646-21G717.46
kidney, neonate N10.CNhs11206.758-6D527.51
kidney, neonate N20.CNhs11113.832-19I120.96
kidney, neonate N25.CNhs11122.1353-25F329.52
kidney, neonate N30.CNhs11203.1385-42H124.80
liver, adult pregnant day01.CNhs10466.508-5B233.50
liver, embryo E12.CNhs10601.355-15F89.18
liver, embryo E13.CNhs10524.378-3H68.85
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D79.53
liver, embryo E16.CNhs10523.462-17F512.06
liver, embryo E17.CNhs10510.481-18A314.00
liver, embryo E18.CNhs10579.499-43G419.28
liver, neonate N00.CNhs11117.641-24F424.64
liver, neonate N03.CNhs11123.1345-25G218.67
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H220.84
liver, neonate N10.CNhs11115.751-24B920.91
liver, neonate N20.CNhs11220.823-25A325.51
liver, neonate N25.CNhs11198.1368-26H136.06
liver, neonate N30.CNhs11106.1382-42D141.49
lung, adult.CNhs10474.28-22B138.43
lung, embryo E12.CNhs10522.354-16G211.75
lung, embryo E14.CNhs10604.404-26F812.87
lung, embryo E15.CNhs11020.432-17C511.03
lung, embryo E16.CNhs10998.458-17B612.20
lung, embryo E17.CNhs10605.480-44A617.25
lung, embryo E18.CNhs10583.1287-20I617.14
lung, neonate N00.CNhs11224.640-42C621.85
lung, neonate N06.CNhs11212.683-20E523.33
lung, neonate N07.CNhs11111.715-19A322.59
lung, neonate N10.CNhs11219.750-23E624.87
lung, neonate N20.CNhs11109.822-18A431.46
lung, neonate N25.CNhs11119.1359-25C728.84
lung, neonate N30.CNhs11133.1394-42H223.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.95
mammary gland, adult lactating day02.CNhs10480.595-22B627.05
mammary gland, adult pregnant day19.CNhs10476.588-5H222.35
medulla oblongata, adult.CNhs10477.17-12C237.41
medulla oblongata, neonate N30.CNhs11200.1396-42A337.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C228.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E126.50
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.13
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.13
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.88
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.82
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.46
olfactory brain, adult.CNhs10489.18-22I924.10
ovary, adult.CNhs10507.91-2I724.98
ovary, embryo E18.CNhs11040.505-44H710.68
ovary, neonate N00.CNhs11217.1299-22I418.57
oviduct, adult pregnant day01.CNhs10500.988-6G632.83
pancreas, adult.CNhs10486.34-16E455.75
pancreas, embryo E14.CNhs11012.405-44F414.32
pancreas, embryo E15.CNhs11042.1556-45F213.00
pancreas, embryo E16.CNhs11003.460-26E532.06
pancreas, embryo E17.CNhs10599.1558-45G325.99
pancreas, embryo E18.CNhs10580.1535-43I740.58
pancreas, neonate N00.CNhs11105.645-26G929.46
pancreas, neonate N01.CNhs11138.1531-43D730.90
pancreas, neonate N02.CNhs11139.1539-43D830.66
pancreas, neonate N16.CNhs11136.787-43B644.25
pancreas, neonate N25.CNhs11094.1555-45E273.79
pancreas, neonate N30.CNhs11182.1548-44H549.51
pituitary gland, adult.CNhs10493.21-1G837.79
pituitary gland, embryo E12.CNhs11018.346-16E614.58
pituitary gland, embryo E13.CNhs11009.370-44C73.62
pituitary gland, embryo E14.CNhs11037.398-44A57.93
pituitary gland, embryo E15.CNhs10592.427-16B916.32
pituitary gland, embryo E16.CNhs11036.449-43F610.35
pituitary gland, embryo E17.CNhs11039.1265-44F513.16
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G311.44
prostate, adult.CNhs10470.859-1F838.81
skin, adult.CNhs10492.30-1C340.07
skin, neonate N00.CNhs11124.650-25G424.87
skin, neonate N03.CNhs11215.662-22H328.05
skin, neonate N06.CNhs11097.693-20I521.49
skin, neonate N10.CNhs11108.762-6C425.11
small intestine, neonate N16.CNhs11114.790-21I118.95
spinal cord, adult.CNhs10505.24-13C940.98
spleen, adult.CNhs10465.25-2G214.52
spleen, embryo E16.CNhs11035.461-43C112.59
spleen, embryo E18.CNhs11011.1271-21F213.33
spleen, neonate N10.CNhs11116.752-24D111.30
spleen, neonate N20.CNhs11112.824-19H112.44
spleen, neonate N25.CNhs11099.1354-25G310.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.33
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E310.76
stomach, embryo E15.CNhs10603.1252-16G816.06
stomach, embryo E16.CNhs11022.459-17D418.79
stomach, embryo E17.CNhs11006.1035-18D518.19
stomach, embryo E18.CNhs10999.1286-20C619.87
stomach, neonate N03.CNhs11193.1340-24B819.02
stomach, neonate N07.CNhs11210.718-18A927.44
stomach, neonate N25.CNhs11104.1355-25E425.65
stomach, neonate N30.CNhs11134.1386-42I121.65
submandibular gland, adult.CNhs10469.59-29C160.89
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F515.55
testis, embryo E15.CNhs11034.443-27C59.76
testis, embryo E16.CNhs11033.470-26G514.78
testis, embryo E17.CNhs11029.486-18I59.69
testis, embryo E18.CNhs11027.503-18G515.21
testis, neonate N00.CNhs11189.1300-22B719.60
testis, neonate N07.CNhs11222.726-26I427.47
testis, neonate N10.CNhs11204.763-44D923.59
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E211.23
thymus, adult.CNhs10471.38-12B523.38
thymus, embryo E14.CNhs11041.402-44I46.89
thymus, embryo E15.CNhs11005.430-45I210.68
thymus, embryo E16.CNhs11002.456-26C514.68
thymus, embryo E17.CNhs10581.478-18C113.43
thymus, embryo E18.CNhs10595.1273-19G414.50
thymus, neonate N02.CNhs11181.1541-43F812.62
thymus, neonate N03.CNhs11137.2104-43C79.90
thymus, neonate N06.CNhs11197.681-26C410.30
thymus, neonate N07.CNhs11211.713-19D39.14
thymus, neonate N10.CNhs11194.748-24E48.87
thymus, neonate N20.CNhs11186.820-7A214.23
thymus, neonate N25.CNhs11125.1362-25G715.11
thymus, neonate N30.CNhs11132.1393-42G217.41
tongue, adult.CNhs10499.32-1B441.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.82
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.71
urinary bladder, adult.CNhs10481.879-12E428.98
uterus, adult pregnant day19.CNhs10497.590-15F527.21
uterus, adult.CNhs10509.92-27E525.82
vagina, adult.CNhs10502.89-27D532.58
vesicular gland, adult.CNhs10491.51-27F848.15
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A319.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A435.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A534.75
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A628.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.24
whole body, embryo E11.CNhs11014.324-5I810.38
whole body, embryo E12.CNhs10587.857-27C913.57
whole body, embryo E13.CNhs10512.372-23H211.61
whole body, embryo E14.5.CNhs10578.420-27D214.34
whole body, embryo E14.CNhs10519.395-14B111.11
whole body, embryo E16.CNhs10514.453-14F214.89
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.29
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.98
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.29
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.82
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.82
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G521.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G524.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G521.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G523.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.25
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.94
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.12
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G525.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G521.41
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.57
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G524.63
whole body, embryo E17.5.CNhs10513.490-9F920.06
whole body, embryo E17.CNhs10517.475-3I511.99
whole body, embryo E18.CNhs10516.493-3B322.93
whole body, neonate N00.CNhs10525.657-19C217.19
whole body, neonate N01.CNhs10576.659-23C614.92
whole body, neonate N06.CNhs10515.692-21D118.75
whole body, neonate N10.CNhs10518.761-6B423.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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