Personal tools

FFCP PHASE1:Mm9::chr17:35137847..35137875,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_4_at_Vars_5end
|description=CAGE_peak_4_at_Vars_5end
|id=chr17:35137847..35137875,+
|id=chr17:35137847..35137875,+
|ontology_enrichment_celltype=CL:0000050!7.67e-07!9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=3.68342348341026,5.93258192986914,6.3699893514535,2.41971369045464,4.50806156951712,16.1164101035414,12.1478573109673,2.58246646883153,7.03943610758334,8.42632294759177,7.70480857014772,7.73789942254763,4.10881751834894,3.75907730401689,22.9845735652807,25.7143589585079,48.9693314689703,8.3597473819933,10.6949258212476,11.8829102503448,3.14660173558958,4.17021995043718,4.4403964153619,8.15961356246374,5.27641346454491,6.89078356938024,8.18447792702242,8.61884930743556,6.65081968097309,7.05684363327806,8.64748991555688,18.4158895303293,31.9833689543976,15.8481681015439,9.82095507154334,13.6312409193964,13.271008157054,0.837063261473815,2.3440060335714,0.523523743973798,1.17646297606203,2.73218193983378,0.971020706062307,2.51793635951155,3.54819259268301,2.9367480345869,2.34717403304412,4.36050312760893,1.75748946187577,3.4997381833371,2.51975558925653,7.18762821824858,6.20795642413625,3.62681071005672,4.03312558970957,0.771778308107841,1.43266719969378,2.57836046138721,8.09265843438391,5.81890077199236,6.33831403506179,1.69422266034566,4.4464739805557,4.49949858640699,2.96659908770092,1.4209602298922,2.99600110518405,5.37905627450176,11.3021677416241,10.6654691282036,6.94072372459561,3.42781181284564,4.8591079009355,8.81933754347669,7.3801012684042,6.43453150627015,5.50579404996943,3.95830748064082,3.22573719838111,6.19865552331911,4.39140689291566,5.73004707612436,8.09630697104005,2.25105044012672,4.12555268997387,3.53554302568401,3.98640706237488,5.59198337475902,1.96888102666279,1.51143120213571,2.89864488701678,6.0229671388697,10.879541339324,7.01614149129162,11.0461990966104,10.7526452903361,8.28622078777336,2.04516387093669,1.81850203222008,1.41335829804136,3.38024207464033,1.28326477414318,0,0,5.19578498426914,5.57391704045217,4.54972000513305,5.82337786567206,3.36619248741323,3.56261133755579,5.03107447621794,3.04465478312141,2.7673859670727,2.26083960828934,3.05730638552832,2.51333182659351,2.22475470960936,5.92857363371638,7.96149496754887,5.66183974815932,9.05450225687614,5.81850303762267,13.0474232852686,7.02673912827713,6.49284791121711,9.45191104271788,4.79260498023681,1.79970819298022,2.79554499560742,4.49371918214468,4.57500602818627,5.90575454930463,4.86708096538374,2.30143911597297,4.57133698031032,3.73154905055843,3.66621709861139,6.84238338355512,5.30717792710717,5.89237196482127,3.90361328888111,4.59804208866946,4.68161537493908,4.67184935290717,4.62648194229029,4.86832137082429,5.43470002446427,3.3631438196072,7.76044774558232,5.8622884852024,6.15828934573821,6.57587197282724,4.17070873838397,4.52727816478817,4.11564272815887,2.9855140022774,0.702213187313235,3.60287069960601,3.40996199274711,3.31401236056803,2.11073453982987,1.80062061461015,1.89395788468168,2.75469924446365,2.46827380619805,2.79040733700489,3.75582761959467,3.38619492864792,2.46839774870221,1.97000956894914,2.02672023864639,3.36259971078264,3.95190207523891,3.48936688776967,2.73376933133365,5.24813523134351,3.96502539580558,9.52022039988759,5.11891801284562,5.34144345279009,5.41243337552792,6.25218926332362,5.55945109612176,6.65789691393957,7.59246498471219,6.0938613247884,3.77002813200404,4.57599885694647,6.04388670069272,9.88701349519644,7.99710784536369,6.77080329064848,4.55202962287396,3.99869794134051,1.1270773567308,4.48032921259691,2.90928730751439,3.15611189506434,2.78240763346732,3.98547399544926,5.02395929092399,3.45512058981041,7.70776830426587,16.017130148745,19.6558995113203,13.9414509678609,12.7801876474757,17.8471098216788,12.731292589071,18.4125527968519,12.4844124616777,10.4333337011471,10.0637744569148,3.34926852901653,3.74445207737473,10.3557339958316,9.86685774370517,7.23665282045051,2.03228509183265,4.16881105895066,2.60743962307241,4.92260748748046,1.87752198630802,1.50755631697634,0.714130922658041,2.53673742215138,1.10344600874334,2.21464689648775,2.87018583583477,1.96635977658886,2.07221978239075,2.4590339958857,1.50791283939272,2.17562273527484,4.91764273019036,3.03530420935206,3.85321415970701,3.98519734413491,1.80328439914343,6.31177318010932,3.15508219416257,3.90438744296638,1.72338718186239,1.67278158566786,1.78238939265915,1.98153571552183,1.61924280669958,3.21481443702443,1.18586333383957,3.53453448063988,3.69044221541498,3.20518086601059,3.58351310577867,4.78413356620353,11.9470624505967,3.64170954232472,5.44182402536552,3.96070667487386,6.20133975049623,5.84126781093462,4.39328098385976,4.72593848320757,3.92147116223193,7.58488219045958,12.6502330289999,6.18813259489121,3.74483566329167,5.221771726908,6.85601024048599,4.71541477069503,3.3694644392032,3.74574516964348,3.62007845324666,6.08929898229199,3.52007562095566,1.69465656691056,7.27743713581374,7.91454014119104,5.9741837877485,7.29786391630686,9.07229814423837,9.02774948597837,6.12109756922687,5.19190845629427,20.3336348149445,4.74689796315412,8.88933731374616,18.271740329455,25.8352090392738,18.5310320297283,3.73952545986482,3.77868921273877,4.28419918793714,4.77335309007557,5.3777118908793,2.43983360552218,5.29226170026826,4.18176592028937,2.62035076495413,4.5853877770839,4.71124697634415,5.75863072364865,7.51766845092399,10.5627683224777,5.07323644815771,4.03694674318743,3.14371131868485,2.33341426012857,2.45403664607689,2.19642963138012,3.52071715937262,3.1249052362548,2.83120229949419,2.17425708743405,2.88030006257865,6.32022241256356,9.52808511863772,8.93585327333997,8.31493267057888,9.48841487037652,6.15912199821921,7.09153152167816,5.1691334511102,4.4425237977185,8.00171469877498,4.7388307014315,5.84747284438514,4.61816839873581,4.09069157635491,8.84248496099324,3.7737612073591,6.19025610605382,2.68615386182526,2.70465431645067,5.2551093126331,5.12824547948342,4.07299920250225,9.02829787263654,4.51801474093653,3.22227665555024,1.14579102687879,2.92150409984269,2.05524755931193,3.0215755895588,5.40018000185445,2.2516060161211,3.17199686288943,2.5888015587591,5.60451676954554,10.3746467084268,9.39034831647738,6.56388136084394,9.01336599300324,8.45680138870065,3.55594764482584,5.76898160268904,6.73930340142812,5.81203587056734,4.30914809813408,5.09291121742406,3.83930180626518,5.95433917365284,5.6286759576501,5.71552429539688,5.09891034157364,4.82273051159263,8.24171801606613,3.67997300335993,3.77156177623957,5.14679837862079,5.48403236878838,5.23247099876383,5.27012530325851,4.73841804193388,5.12198324043763,2.89376682581627,5.70377278152619,7.2948495315506,5.21994079746366,5.31924204828043,5.72923460437565,6.04253680625267,5.5942917184531,7.99393849401427,5.6143586026898,6.66100267549725,4.01705497344571,3.97064554415128,3.94175320554716
|phase1_expression=3.68342348341026,5.93258192986914,6.3699893514535,2.41971369045464,4.50806156951712,16.1164101035414,12.1478573109673,2.58246646883153,7.03943610758334,8.42632294759177,7.70480857014772,7.73789942254763,4.10881751834894,3.75907730401689,22.9845735652807,25.7143589585079,48.9693314689703,8.3597473819933,10.6949258212476,11.8829102503448,3.14660173558958,4.17021995043718,4.4403964153619,8.15961356246374,5.27641346454491,6.89078356938024,8.18447792702242,8.61884930743556,6.65081968097309,7.05684363327806,8.64748991555688,18.4158895303293,31.9833689543976,15.8481681015439,9.82095507154334,13.6312409193964,13.271008157054,0.837063261473815,2.3440060335714,0.523523743973798,1.17646297606203,2.73218193983378,0.971020706062307,2.51793635951155,3.54819259268301,2.9367480345869,2.34717403304412,4.36050312760893,1.75748946187577,3.4997381833371,2.51975558925653,7.18762821824858,6.20795642413625,3.62681071005672,4.03312558970957,0.771778308107841,1.43266719969378,2.57836046138721,8.09265843438391,5.81890077199236,6.33831403506179,1.69422266034566,4.4464739805557,4.49949858640699,2.96659908770092,1.4209602298922,2.99600110518405,5.37905627450176,11.3021677416241,10.6654691282036,6.94072372459561,3.42781181284564,4.8591079009355,8.81933754347669,7.3801012684042,6.43453150627015,5.50579404996943,3.95830748064082,3.22573719838111,6.19865552331911,4.39140689291566,5.73004707612436,8.09630697104005,2.25105044012672,4.12555268997387,3.53554302568401,3.98640706237488,5.59198337475902,1.96888102666279,1.51143120213571,2.89864488701678,6.0229671388697,10.879541339324,7.01614149129162,11.0461990966104,10.7526452903361,8.28622078777336,2.04516387093669,1.81850203222008,1.41335829804136,3.38024207464033,1.28326477414318,0,0,5.19578498426914,5.57391704045217,4.54972000513305,5.82337786567206,3.36619248741323,3.56261133755579,5.03107447621794,3.04465478312141,2.7673859670727,2.26083960828934,3.05730638552832,2.51333182659351,2.22475470960936,5.92857363371638,7.96149496754887,5.66183974815932,9.05450225687614,5.81850303762267,13.0474232852686,7.02673912827713,6.49284791121711,9.45191104271788,4.79260498023681,1.79970819298022,2.79554499560742,4.49371918214468,4.57500602818627,5.90575454930463,4.86708096538374,2.30143911597297,4.57133698031032,3.73154905055843,3.66621709861139,6.84238338355512,5.30717792710717,5.89237196482127,3.90361328888111,4.59804208866946,4.68161537493908,4.67184935290717,4.62648194229029,4.86832137082429,5.43470002446427,3.3631438196072,7.76044774558232,5.8622884852024,6.15828934573821,6.57587197282724,4.17070873838397,4.52727816478817,4.11564272815887,2.9855140022774,0.702213187313235,3.60287069960601,3.40996199274711,3.31401236056803,2.11073453982987,1.80062061461015,1.89395788468168,2.75469924446365,2.46827380619805,2.79040733700489,3.75582761959467,3.38619492864792,2.46839774870221,1.97000956894914,2.02672023864639,3.36259971078264,3.95190207523891,3.48936688776967,2.73376933133365,5.24813523134351,3.96502539580558,9.52022039988759,5.11891801284562,5.34144345279009,5.41243337552792,6.25218926332362,5.55945109612176,6.65789691393957,7.59246498471219,6.0938613247884,3.77002813200404,4.57599885694647,6.04388670069272,9.88701349519644,7.99710784536369,6.77080329064848,4.55202962287396,3.99869794134051,1.1270773567308,4.48032921259691,2.90928730751439,3.15611189506434,2.78240763346732,3.98547399544926,5.02395929092399,3.45512058981041,7.70776830426587,16.017130148745,19.6558995113203,13.9414509678609,12.7801876474757,17.8471098216788,12.731292589071,18.4125527968519,12.4844124616777,10.4333337011471,10.0637744569148,3.34926852901653,3.74445207737473,10.3557339958316,9.86685774370517,7.23665282045051,2.03228509183265,4.16881105895066,2.60743962307241,4.92260748748046,1.87752198630802,1.50755631697634,0.714130922658041,2.53673742215138,1.10344600874334,2.21464689648775,2.87018583583477,1.96635977658886,2.07221978239075,2.4590339958857,1.50791283939272,2.17562273527484,4.91764273019036,3.03530420935206,3.85321415970701,3.98519734413491,1.80328439914343,6.31177318010932,3.15508219416257,3.90438744296638,1.72338718186239,1.67278158566786,1.78238939265915,1.98153571552183,1.61924280669958,3.21481443702443,1.18586333383957,3.53453448063988,3.69044221541498,3.20518086601059,3.58351310577867,4.78413356620353,11.9470624505967,3.64170954232472,5.44182402536552,3.96070667487386,6.20133975049623,5.84126781093462,4.39328098385976,4.72593848320757,3.92147116223193,7.58488219045958,12.6502330289999,6.18813259489121,3.74483566329167,5.221771726908,6.85601024048599,4.71541477069503,3.3694644392032,3.74574516964348,3.62007845324666,6.08929898229199,3.52007562095566,1.69465656691056,7.27743713581374,7.91454014119104,5.9741837877485,7.29786391630686,9.07229814423837,9.02774948597837,6.12109756922687,5.19190845629427,20.3336348149445,4.74689796315412,8.88933731374616,18.271740329455,25.8352090392738,18.5310320297283,3.73952545986482,3.77868921273877,4.28419918793714,4.77335309007557,5.3777118908793,2.43983360552218,5.29226170026826,4.18176592028937,2.62035076495413,4.5853877770839,4.71124697634415,5.75863072364865,7.51766845092399,10.5627683224777,5.07323644815771,4.03694674318743,3.14371131868485,2.33341426012857,2.45403664607689,2.19642963138012,3.52071715937262,3.1249052362548,2.83120229949419,2.17425708743405,2.88030006257865,6.32022241256356,9.52808511863772,8.93585327333997,8.31493267057888,9.48841487037652,6.15912199821921,7.09153152167816,5.1691334511102,4.4425237977185,8.00171469877498,4.7388307014315,5.84747284438514,4.61816839873581,4.09069157635491,8.84248496099324,3.7737612073591,6.19025610605382,2.68615386182526,2.70465431645067,5.2551093126331,5.12824547948342,4.07299920250225,9.02829787263654,4.51801474093653,3.22227665555024,1.14579102687879,2.92150409984269,2.05524755931193,3.0215755895588,5.40018000185445,2.2516060161211,3.17199686288943,2.5888015587591,5.60451676954554,10.3746467084268,9.39034831647738,6.56388136084394,9.01336599300324,8.45680138870065,3.55594764482584,5.76898160268904,6.73930340142812,5.81203587056734,4.30914809813408,5.09291121742406,3.83930180626518,5.95433917365284,5.6286759576501,5.71552429539688,5.09891034157364,4.82273051159263,8.24171801606613,3.67997300335993,3.77156177623957,5.14679837862079,5.48403236878838,5.23247099876383,5.27012530325851,4.73841804193388,5.12198324043763,2.89376682581627,5.70377278152619,7.2948495315506,5.21994079746366,5.31924204828043,5.72923460437565,6.04253680625267,5.5942917184531,7.99393849401427,5.6143586026898,6.66100267549725,4.01705497344571,3.97064554415128,3.94175320554716
|short_description=p4@Vars
|short_description=p4@Vars
}}
}}

Revision as of 08:02, 18 April 2012

Short description:p4@Vars
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Vars_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_011690, uc008cey.2, uc008cez.2_5end
EntrezGene:Vars
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Vars

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.15
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.74
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.76
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A122.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A325.71
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A548.97
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I18.18
GP2+ M cell, pool3.CNhs13240.11847-124I28.62
Ileum epithelium, pool1.CNhs13199.10252-104B96.65
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I318.42
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G631.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.63
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.52
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.55
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.21
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C38.09
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.30
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.38
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.82
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C13.06
adrenal gland, neonate N25.CNhs11223.1377-27I32.51
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H15.93
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F55.66
bone (os femoris), neonate N16.CNhs11225.1525-43A69.05
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I26.49
colon, adult.CNhs10468.36-18H79.45
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.80
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F15.91
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B23.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.84
epididymis, adult.CNhs10490.58-23B25.31
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C64.63
eyeball, neonate N01.CNhs11140.1532-43E74.87
eyeball, neonate N02.CNhs11205.1551-44G85.43
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E27.76
forelimb, embryo E12.CNhs10600.359-14H25.86
forelimb, embryo E13.CNhs10589.384-1E26.16
forelimb, embryo E14.CNhs10577.413-26A86.58
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E93.31
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E33.39
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A39.52
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D85.41
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F76.66
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E96.09
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E38.00
intestine, neonate N30.CNhs11131.1384-42G16.77
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G73.16
kidney, neonate N10.CNhs11206.758-6D52.78
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F35.02
kidney, neonate N30.CNhs11203.1385-42H13.46
liver, adult pregnant day01.CNhs10466.508-5B27.71
liver, embryo E12.CNhs10601.355-15F816.02
liver, embryo E13.CNhs10524.378-3H619.66
liver, embryo E14.CNhs10594.409-16E113.94
liver, embryo E15.CNhs10520.433-16D712.78
liver, embryo E16.CNhs10523.462-17F517.85
liver, embryo E17.CNhs10510.481-18A312.73
liver, embryo E18.CNhs10579.499-43G418.41
liver, neonate N00.CNhs11117.641-24F412.48
liver, neonate N03.CNhs11123.1345-25G210.43
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A310.36
liver, neonate N25.CNhs11198.1368-26H19.87
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G24.17
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I73.69
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B67.58
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E65.22
pituitary gland, embryo E13.CNhs11009.370-44C76.86
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F87.28
skin, adult.CNhs10492.30-1C37.91
skin, neonate N00.CNhs11124.650-25G45.97
skin, neonate N03.CNhs11215.662-22H37.30
skin, neonate N06.CNhs11097.693-20I59.07
skin, neonate N10.CNhs11108.762-6C49.03
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G220.33
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F28.89
spleen, neonate N10.CNhs11116.752-24D118.27
spleen, neonate N20.CNhs11112.824-19H125.84
spleen, neonate N25.CNhs11099.1354-25G318.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.28
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E35.38
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D45.29
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B84.59
stomach, neonate N07.CNhs11210.718-18A94.71
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I17.52
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F54.04
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I28.94
thymus, embryo E16.CNhs11002.456-26C58.31
thymus, embryo E17.CNhs10581.478-18C19.49
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F87.09
thymus, neonate N03.CNhs11137.2104-43C75.17
thymus, neonate N06.CNhs11197.681-26C44.44
thymus, neonate N07.CNhs11211.713-19D38.00
thymus, neonate N10.CNhs11194.748-24E44.74
thymus, neonate N20.CNhs11186.820-7A25.85
thymus, neonate N25.CNhs11125.1362-25G74.62
thymus, neonate N30.CNhs11132.1393-42G24.09
tongue, adult.CNhs10499.32-1B48.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.19
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I85.60
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H29.39
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B19.01
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.04
whole body, embryo E17.5.CNhs10513.490-9F95.59
whole body, embryo E17.CNhs10517.475-3I57.99
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:35137847..35137875,%2B&oldid=848248"