Personal tools

FFCP PHASE1:Mm9::chr2:24790668..24790735,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:24790668..24790735,-
|short_description=p1@Arrdc1
|description=CAGE_peak_1_at_Arrdc1_5end
|association_with_transcript=0bp_to_ENSMUST00000102935,ENSMUST00000133396,ENSMUST00000133934,ENSMUST00000144963_5end
|EntrezGene=215705
|EntrezGene=215705
|HGNC=
|HGNC=
|UniProt=Q99KN1,A2AIS9,D6RDR8
|UniProt=Q99KN1,A2AIS9,D6RDR8
|association_with_transcript=0bp_to_ENSMUST00000102935,ENSMUST00000133396,ENSMUST00000133934,ENSMUST00000144963_5end
|description=CAGE_peak_1_at_Arrdc1_5end
|id=chr2:24790668..24790735,-
|ontology_enrichment_disease=
|phase1_expression=12.9720566154883,50.9504095153467,73.2548775417153,60.7953064726728,65.1164448930251,55.5680390028355,55.5998084617351,48.8086162609158,15.20518199238,14.5120006319636,7.87602653837323,9.6524312384357,44.3409890521823,51.4906170247895,19.3203661853084,18.8301998672538,16.7894850750755,52.5244505321466,42.7797032849905,39.0438479654188,15.3077922271926,31.3759405794798,31.0827749075333,52.9574919446176,57.3523202667925,59.1458923038471,74.952587331679,58.8236465232477,60.997517645496,46.6255740055872,49.445903876133,2.54012269383853,6.1506478758457,0,42.1723364836861,37.2365605603023,42.8755648150975,84.5433894088554,46.880120671428,52.3523743973798,75.2936304679698,78.5502307702212,70.8845115425484,8.43508680436368,10.644577778049,6.79122982998222,21.1245662973971,4.14247797122848,5.05278220289285,5.8328969722285,8.25919887589639,5.75010257459886,45.4690862416466,42.071004236658,41.3395372945231,13.3774906738692,9.45560351797897,12.3761302146586,5.66486090406874,7.93486468908049,12.6766280701236,10.8430250262122,14.2287167377782,61.6431306337758,71.1983781048222,75.3108921842866,26.3648097256196,16.5213871288268,6.32506635081714,5.53524347159932,4.83747411108179,13.4255962669788,11.7060326704355,4.04219637409348,3.45043695665651,12.8690630125403,5.50579404996943,5.2351808614927,3.37934373163736,7.51751840062105,8.5083508550241,10.4182674111352,4.18774498502071,2.8138130501584,5.34793867218835,10.0173719061047,8.82704420954438,10.4383689662168,3.40767869999328,8.61515785217355,33.9141451780963,6.88339101585109,1.3599426674155,3.2382191498269,2.59910566979068,1.34408066129201,11.7973312910672,7.49893419343454,10.3914401841148,9.54016851177919,28.5912142146661,8.98285341900225,5.09610479413291,14.2213340630666,39.6178605050522,41.044298206966,44.9916756063157,13.9304333257253,29.0010429684832,9.50029690014878,5.89850111004862,7.00270600117925,8.07154240396205,6.93324146542064,10.2302175208063,6.03199638382442,25.9554716121093,5.06097749219691,32.7305904221453,9.70601099684455,10.8212344045593,11.1521308221101,46.5979403045305,5.27005434620785,6.91174132484402,31.1657607354481,22.7648736561249,27.5955256256968,19.0605340609597,5.09288173976397,2.28750301409313,7.91622418311046,4.17178368461463,4.60287823194595,3.1168206683934,5.51620294430376,13.4427960282417,19.9051152976149,24.0086620511991,6.94458124425364,5.33493816147085,7.12696523743766,3.96136685571768,7.38453607395004,9.32100038373192,6.79002717509704,8.62055865949505,6.72628763921441,4.095791865724,4.72765200419548,5.80638709741031,8.32943783224784,8.61946472599353,8.70630416305416,13.9931852757402,6.17006227137329,21.7686088067103,17.4996576838006,22.4489164522518,4.76389276831654,4.92504725960302,4.32148947506436,4.7348947117042,6.29645541591692,5.24508183817086,4.41814495025775,4.02410102099429,5.48797109125697,3.29119699826961,9.68588038066662,5.83695428730161,6.57899943413995,6.80605357402257,7.91817870686193,2.94405927989778,5.9684675179985,46.2586296177317,19.8337924997658,4.47905326123991,8.59275685883622,19.4589866596361,25.4121241025412,30.0210359190575,28.5338439168839,33.2170343081158,26.3518327558417,33.6789179792361,36.2100779114894,33.5338229844887,38.6492345721315,36.743468478698,39.031689557856,7.96605184002943,8.56863844572966,11.270773567308,11.6081256871829,11.0552917685547,15.5000161957604,20.9945303252534,23.6176236767363,20.095837163696,24.5560356204383,4.15033677922008,5.5058884886311,9.23827277032054,8.54476027062444,8.52012509831712,11.576503668116,10.9489116266011,10.9324532231308,10.0523840600522,9.33508804839477,10.0637744569148,13.7692150637346,8.11297950097858,2.02063102357689,3.58794827043824,2.8946611281802,38.4286635546538,7.57965647081939,14.3409179268983,15.9560380628677,23.9384053254272,32.9987327160377,41.6576371550524,45.4661399508671,27.9014205067958,29.6762684129358,31.412589425525,33.9197061461578,33.155516518252,38.1873514655191,25.6345182696763,50.58322859514,18.1952781017043,29.2492951083016,4.65596710964597,5.04010252346474,1.3114795630134,5.80683132570058,6.94118082715765,8.98009111882268,6.24727853425117,8.84184552424442,8.68914828921337,8.20921939287614,6.47697122679831,10.2289550268959,9.88219444866309,5.46246237917072,19.8716119291576,14.4233138970477,12.0536349921646,25.0754586918254,14.6019652173959,15.2951800777638,22.0696196584268,12.0707251043775,20.0805287158925,17.8312385807478,26.3596859031586,17.4496190149203,16.7553767840819,13.2735438333043,12.6502330289999,10.3135543248187,17.3624198934432,11.8840322060665,20.1799546701097,10.9311887866112,10.1083933176096,9.81028496811388,9.54384319492302,9.43841342255258,9.62154003061212,8.89694697628045,46.9725487857069,18.4672603294458,17.5996225098537,10.3135101627147,13.7278195603607,14.9368218768006,33.228815375803,3.8939313422207,23.9219233116994,14.0343070214991,13.8895895527284,17.8950034154456,18.5904149700594,23.1065954938588,24.1369370591275,25.0513099659348,26.1197950490361,69.6909551151033,8.54107182669065,20.9419051140654,22.7891269134001,25.0905955217362,26.8585953407798,27.9169197016579,28.4327887695156,41.6191947754607,38.6252620409543,39.1443767244763,2.25477175473676,6.42921147989109,3.97100377097034,8.94475466382619,4.52059382172059,5.74450826668646,9.50593633030607,12.3694165601753,7.96931017635402,2.89900944991207,4.03242008761012,18.3286449964343,11.7580624868295,12.2226039026144,13.3818447667129,17.5446161754132,11.3248372225321,15.264822089036,17.4273642066001,12.4188733436222,13.641018391245,14.7206230299787,18.127165817594,19.8196393779079,25.9466722843083,14.964205318604,17.092918409803,9.9582380836518,16.1169231709515,22.6031825017663,22.8972620050442,35.7145667321167,28.7253627965948,61.6933687963497,2.82375921308533,6.44455331110048,6.30185064783336,4.81188910562325,3.42541259885321,2.2661816921691,4.05013500139084,3.60256962579376,4.07828168085784,3.10656187051092,2.80225838477277,6.3843979744165,6.4878770186571,9.48116196566347,9.22297915563122,7.72142735490059,11.1123363900808,11.743998262617,10.2694147069381,10.3605856823157,10.6461305953901,13.7697229211836,11.143339388916,11.0763513660424,11.7168356669451,13.8125170472091,13.4425818096032,13.5036454324594,15.2471783297223,14.5726930933053,15.4291163573437,14.3755402989063,9.77588378784016,12.0637525804833,9.88148494360971,10.0691383391095,11.1586063452391,10.7858581689516,12.3581743599734,12.3451299764702,10.5585166130515,13.98763649733,11.867700251921,12.2400104536913,13.8892759906422,10.9916654292696,14.0358965067245,18.0491685400571,14.3466249051633,15.0002165001271,8.34724208233517
|phase1_expression=12.9720566154883,50.9504095153467,73.2548775417153,60.7953064726728,65.1164448930251,55.5680390028355,55.5998084617351,48.8086162609158,15.20518199238,14.5120006319636,7.87602653837323,9.6524312384357,44.3409890521823,51.4906170247895,19.3203661853084,18.8301998672538,16.7894850750755,52.5244505321466,42.7797032849905,39.0438479654188,15.3077922271926,31.3759405794798,31.0827749075333,52.9574919446176,57.3523202667925,59.1458923038471,74.952587331679,58.8236465232477,60.997517645496,46.6255740055872,49.445903876133,2.54012269383853,6.1506478758457,0,42.1723364836861,37.2365605603023,42.8755648150975,84.5433894088554,46.880120671428,52.3523743973798,75.2936304679698,78.5502307702212,70.8845115425484,8.43508680436368,10.644577778049,6.79122982998222,21.1245662973971,4.14247797122848,5.05278220289285,5.8328969722285,8.25919887589639,5.75010257459886,45.4690862416466,42.071004236658,41.3395372945231,13.3774906738692,9.45560351797897,12.3761302146586,5.66486090406874,7.93486468908049,12.6766280701236,10.8430250262122,14.2287167377782,61.6431306337758,71.1983781048222,75.3108921842866,26.3648097256196,16.5213871288268,6.32506635081714,5.53524347159932,4.83747411108179,13.4255962669788,11.7060326704355,4.04219637409348,3.45043695665651,12.8690630125403,5.50579404996943,5.2351808614927,3.37934373163736,7.51751840062105,8.5083508550241,10.4182674111352,4.18774498502071,2.8138130501584,5.34793867218835,10.0173719061047,8.82704420954438,10.4383689662168,3.40767869999328,8.61515785217355,33.9141451780963,6.88339101585109,1.3599426674155,3.2382191498269,2.59910566979068,1.34408066129201,11.7973312910672,7.49893419343454,10.3914401841148,9.54016851177919,28.5912142146661,8.98285341900225,5.09610479413291,14.2213340630666,39.6178605050522,41.044298206966,44.9916756063157,13.9304333257253,29.0010429684832,9.50029690014878,5.89850111004862,7.00270600117925,8.07154240396205,6.93324146542064,10.2302175208063,6.03199638382442,25.9554716121093,5.06097749219691,32.7305904221453,9.70601099684455,10.8212344045593,11.1521308221101,46.5979403045305,5.27005434620785,6.91174132484402,31.1657607354481,22.7648736561249,27.5955256256968,19.0605340609597,5.09288173976397,2.28750301409313,7.91622418311046,4.17178368461463,4.60287823194595,3.1168206683934,5.51620294430376,13.4427960282417,19.9051152976149,24.0086620511991,6.94458124425364,5.33493816147085,7.12696523743766,3.96136685571768,7.38453607395004,9.32100038373192,6.79002717509704,8.62055865949505,6.72628763921441,4.095791865724,4.72765200419548,5.80638709741031,8.32943783224784,8.61946472599353,8.70630416305416,13.9931852757402,6.17006227137329,21.7686088067103,17.4996576838006,22.4489164522518,4.76389276831654,4.92504725960302,4.32148947506436,4.7348947117042,6.29645541591692,5.24508183817086,4.41814495025775,4.02410102099429,5.48797109125697,3.29119699826961,9.68588038066662,5.83695428730161,6.57899943413995,6.80605357402257,7.91817870686193,2.94405927989778,5.9684675179985,46.2586296177317,19.8337924997658,4.47905326123991,8.59275685883622,19.4589866596361,25.4121241025412,30.0210359190575,28.5338439168839,33.2170343081158,26.3518327558417,33.6789179792361,36.2100779114894,33.5338229844887,38.6492345721315,36.743468478698,39.031689557856,7.96605184002943,8.56863844572966,11.270773567308,11.6081256871829,11.0552917685547,15.5000161957604,20.9945303252534,23.6176236767363,20.095837163696,24.5560356204383,4.15033677922008,5.5058884886311,9.23827277032054,8.54476027062444,8.52012509831712,11.576503668116,10.9489116266011,10.9324532231308,10.0523840600522,9.33508804839477,10.0637744569148,13.7692150637346,8.11297950097858,2.02063102357689,3.58794827043824,2.8946611281802,38.4286635546538,7.57965647081939,14.3409179268983,15.9560380628677,23.9384053254272,32.9987327160377,41.6576371550524,45.4661399508671,27.9014205067958,29.6762684129358,31.412589425525,33.9197061461578,33.155516518252,38.1873514655191,25.6345182696763,50.58322859514,18.1952781017043,29.2492951083016,4.65596710964597,5.04010252346474,1.3114795630134,5.80683132570058,6.94118082715765,8.98009111882268,6.24727853425117,8.84184552424442,8.68914828921337,8.20921939287614,6.47697122679831,10.2289550268959,9.88219444866309,5.46246237917072,19.8716119291576,14.4233138970477,12.0536349921646,25.0754586918254,14.6019652173959,15.2951800777638,22.0696196584268,12.0707251043775,20.0805287158925,17.8312385807478,26.3596859031586,17.4496190149203,16.7553767840819,13.2735438333043,12.6502330289999,10.3135543248187,17.3624198934432,11.8840322060665,20.1799546701097,10.9311887866112,10.1083933176096,9.81028496811388,9.54384319492302,9.43841342255258,9.62154003061212,8.89694697628045,46.9725487857069,18.4672603294458,17.5996225098537,10.3135101627147,13.7278195603607,14.9368218768006,33.228815375803,3.8939313422207,23.9219233116994,14.0343070214991,13.8895895527284,17.8950034154456,18.5904149700594,23.1065954938588,24.1369370591275,25.0513099659348,26.1197950490361,69.6909551151033,8.54107182669065,20.9419051140654,22.7891269134001,25.0905955217362,26.8585953407798,27.9169197016579,28.4327887695156,41.6191947754607,38.6252620409543,39.1443767244763,2.25477175473676,6.42921147989109,3.97100377097034,8.94475466382619,4.52059382172059,5.74450826668646,9.50593633030607,12.3694165601753,7.96931017635402,2.89900944991207,4.03242008761012,18.3286449964343,11.7580624868295,12.2226039026144,13.3818447667129,17.5446161754132,11.3248372225321,15.264822089036,17.4273642066001,12.4188733436222,13.641018391245,14.7206230299787,18.127165817594,19.8196393779079,25.9466722843083,14.964205318604,17.092918409803,9.9582380836518,16.1169231709515,22.6031825017663,22.8972620050442,35.7145667321167,28.7253627965948,61.6933687963497,2.82375921308533,6.44455331110048,6.30185064783336,4.81188910562325,3.42541259885321,2.2661816921691,4.05013500139084,3.60256962579376,4.07828168085784,3.10656187051092,2.80225838477277,6.3843979744165,6.4878770186571,9.48116196566347,9.22297915563122,7.72142735490059,11.1123363900808,11.743998262617,10.2694147069381,10.3605856823157,10.6461305953901,13.7697229211836,11.143339388916,11.0763513660424,11.7168356669451,13.8125170472091,13.4425818096032,13.5036454324594,15.2471783297223,14.5726930933053,15.4291163573437,14.3755402989063,9.77588378784016,12.0637525804833,9.88148494360971,10.0691383391095,11.1586063452391,10.7858581689516,12.3581743599734,12.3451299764702,10.5585166130515,13.98763649733,11.867700251921,12.2400104536913,13.8892759906422,10.9916654292696,14.0358965067245,18.0491685400571,14.3466249051633,15.0002165001271,8.34724208233517
|short_description=p1@Arrdc1
}}
}}

Revision as of 09:42, 18 April 2012

Short description:p1@Arrdc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arrdc1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000102935, ENSMUST00000133396, ENSMUST00000133934, ENSMUST00000144963_5end
EntrezGene:Arrdc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arrdc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I550.95
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I673.25
CD326+ enterocyte, pool1.CNhs13542.11848-124I360.80
CD326+ enterocyte, pool2.CNhs13197.11849-124I465.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I755.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I855.60
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E948.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.65
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E444.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E851.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A119.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A318.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A252.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A442.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A639.04
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H231.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I931.08
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D152.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D257.35
GP2+ M cell, pool1.CNhs13228.11845-124H959.15
GP2+ M cell, pool2.CNhs13231.11846-124I174.95
GP2+ M cell, pool3.CNhs13240.11847-124I258.82
Ileum epithelium, pool1.CNhs13199.10252-104B961.00
Ileum epithelium, pool2.CNhs13232.10253-104C146.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C849.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F542.17
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F637.24
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F742.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G884.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H146.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H352.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G975.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H278.55
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H470.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.64
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A245.47
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I942.07
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A141.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.38
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C761.64
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E771.20
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D275.31
Mouse Microglia, donor1.CNhs12629.11718-123C826.36
Mouse Microglia, donor2.CNhs12634.11736-123E816.52
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.44
Mouse Schwann, donor1.CNhs12507.11728-123D93.41
Mouse Schwann, donor2.CNhs12573.11746-123F98.62
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.91
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.80
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.59
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G139.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G241.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G344.99
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.93
accessory axillary lymph node, adult.CNhs10475.1063-29H929.00
adrenal gland, adult.CNhs10508.49-24D79.50
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I18.07
adrenal gland, embryo E18.CNhs11026.1262-18F56.93
adrenal gland, neonate N00.CNhs11191.1311-23C110.23
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A825.96
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G232.73
bone (os femoris), neonate N02.CNhs11227.1985-43F59.71
bone (os femoris), neonate N16.CNhs11225.1525-43A610.82
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H446.60
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I26.91
colon, adult.CNhs10468.36-18H731.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C722.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D127.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.06
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F17.92
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.91
epididymis, adult.CNhs10490.58-23B224.01
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C65.33
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D47.38
eyeball, neonate N00.CNhs11207.633-15C69.32
eyeball, neonate N01.CNhs11140.1532-43E76.79
eyeball, neonate N02.CNhs11205.1551-44G88.62
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E25.81
forelimb, embryo E14.CNhs10577.413-26A88.33
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B513.99
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C821.77
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D217.50
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D522.45
heart, embryo E11.CNhs10586.331-24E94.76
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C86.30
heart, embryo E16.CNhs11021.457-17C65.25
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E35.49
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G19.69
heart, neonate N16.CNhs11209.782-15G15.84
heart, neonate N20.CNhs11127.821-26I66.58
heart, neonate N25.CNhs11196.1351-25D36.81
heart, neonate N30.CNhs11202.1390-42D27.92
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G15.97
intestinal mucosa, adult.CNhs10506.860-29I346.26
intestine, adult.CNhs10496.178-9A319.83
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D58.59
intestine, embryo E15.CNhs10602.976-16D819.46
intestine, embryo E16.CNhs10585.463-22H425.41
intestine, embryo E17.CNhs10582.482-18D330.02
intestine, embryo E18.CNhs10526.1289-20F728.53
intestine, neonate N00.CNhs11126.644-26D133.22
intestine, neonate N01.CNhs11192.1322-23E926.35
intestine, neonate N06.CNhs11102.688-20B833.68
intestine, neonate N07.CNhs11095.720-20F236.21
intestine, neonate N10.CNhs11098.755-23A533.53
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E336.74
intestine, neonate N30.CNhs11131.1384-42G139.03
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F88.57
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I211.61
kidney, embryo E18.CNhs11001.1288-20C711.06
kidney, neonate N00.CNhs11214.646-21G715.50
kidney, neonate N10.CNhs11206.758-6D520.99
kidney, neonate N20.CNhs11113.832-19I123.62
kidney, neonate N25.CNhs11122.1353-25F320.10
kidney, neonate N30.CNhs11203.1385-42H124.56
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F85.51
liver, embryo E13.CNhs10524.378-3H69.24
liver, embryo E14.CNhs10594.409-16E18.54
liver, embryo E15.CNhs10520.433-16D78.52
liver, embryo E16.CNhs10523.462-17F511.58
liver, embryo E17.CNhs10510.481-18A310.95
liver, embryo E18.CNhs10579.499-43G410.93
liver, neonate N00.CNhs11117.641-24F410.05
liver, neonate N03.CNhs11123.1345-25G29.34
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H213.77
liver, neonate N10.CNhs11115.751-24B98.11
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B138.43
lung, embryo E12.CNhs10522.354-16G27.58
lung, embryo E14.CNhs10604.404-26F814.34
lung, embryo E15.CNhs11020.432-17C515.96
lung, embryo E16.CNhs10998.458-17B623.94
lung, embryo E17.CNhs10605.480-44A633.00
lung, embryo E18.CNhs10583.1287-20I641.66
lung, neonate N00.CNhs11224.640-42C645.47
lung, neonate N06.CNhs11212.683-20E527.90
lung, neonate N07.CNhs11111.715-19A329.68
lung, neonate N10.CNhs11219.750-23E631.41
lung, neonate N20.CNhs11109.822-18A433.92
lung, neonate N25.CNhs11119.1359-25C733.16
lung, neonate N30.CNhs11133.1394-42H238.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A125.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A150.58
mammary gland, adult lactating day02.CNhs10480.595-22B618.20
mammary gland, adult pregnant day19.CNhs10476.588-5H229.25
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I719.87
ovary, embryo E18.CNhs11040.505-44H714.42
ovary, neonate N00.CNhs11217.1299-22I412.05
oviduct, adult pregnant day01.CNhs10500.988-6G625.08
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F415.30
pancreas, embryo E15.CNhs11042.1556-45F222.07
pancreas, embryo E16.CNhs11003.460-26E512.07
pancreas, embryo E17.CNhs10599.1558-45G320.08
pancreas, embryo E18.CNhs10580.1535-43I717.83
pancreas, neonate N00.CNhs11105.645-26G926.36
pancreas, neonate N01.CNhs11138.1531-43D717.45
pancreas, neonate N02.CNhs11139.1539-43D816.76
pancreas, neonate N16.CNhs11136.787-43B613.27
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G817.36
pituitary gland, embryo E12.CNhs11018.346-16E611.88
pituitary gland, embryo E13.CNhs11009.370-44C720.18
pituitary gland, embryo E14.CNhs11037.398-44A510.93
pituitary gland, embryo E15.CNhs10592.427-16B910.11
pituitary gland, embryo E16.CNhs11036.449-43F69.81
pituitary gland, embryo E17.CNhs11039.1265-44F59.54
pituitary gland, neonate N00.CNhs11190.1308-22E99.44
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G38.90
prostate, adult.CNhs10470.859-1F846.97
skin, adult.CNhs10492.30-1C318.47
skin, neonate N00.CNhs11124.650-25G417.60
skin, neonate N03.CNhs11215.662-22H310.31
skin, neonate N06.CNhs11097.693-20I513.73
skin, neonate N10.CNhs11108.762-6C414.94
small intestine, neonate N16.CNhs11114.790-21I133.23
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G223.92
spleen, embryo E16.CNhs11035.461-43C114.03
spleen, embryo E18.CNhs11011.1271-21F213.89
spleen, neonate N10.CNhs11116.752-24D117.90
spleen, neonate N20.CNhs11112.824-19H118.59
spleen, neonate N25.CNhs11099.1354-25G323.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C624.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D326.12
stomach, adult.CNhs10503.33-1H669.69
stomach, embryo E12.CNhs10588.356-43E38.54
stomach, embryo E15.CNhs10603.1252-16G820.94
stomach, embryo E16.CNhs11022.459-17D422.79
stomach, embryo E17.CNhs11006.1035-18D525.09
stomach, embryo E18.CNhs10999.1286-20C626.86
stomach, neonate N03.CNhs11193.1340-24B827.92
stomach, neonate N07.CNhs11210.718-18A928.43
stomach, neonate N25.CNhs11104.1355-25E441.62
stomach, neonate N30.CNhs11134.1386-42I138.63
submandibular gland, adult.CNhs10469.59-29C139.14
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F56.43
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G58.94
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G55.74
testis, neonate N00.CNhs11189.1300-22B79.51
testis, neonate N07.CNhs11222.726-26I412.37
testis, neonate N10.CNhs11204.763-44D97.97
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B518.33
thymus, embryo E14.CNhs11041.402-44I411.76
thymus, embryo E15.CNhs11005.430-45I212.22
thymus, embryo E16.CNhs11002.456-26C513.38
thymus, embryo E17.CNhs10581.478-18C117.54
thymus, embryo E18.CNhs10595.1273-19G411.32
thymus, neonate N02.CNhs11181.1541-43F815.26
thymus, neonate N03.CNhs11137.2104-43C717.43
thymus, neonate N06.CNhs11197.681-26C412.42
thymus, neonate N07.CNhs11211.713-19D313.64
thymus, neonate N10.CNhs11194.748-24E414.72
thymus, neonate N20.CNhs11186.820-7A218.13
thymus, neonate N25.CNhs11125.1362-25G719.82
thymus, neonate N30.CNhs11132.1393-42G225.95
tongue, adult.CNhs10499.32-1B414.96
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.09
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.12
urinary bladder, adult.CNhs10481.879-12E422.60
uterus, adult pregnant day19.CNhs10497.590-15F522.90
uterus, adult.CNhs10509.92-27E535.71
vagina, adult.CNhs10502.89-27D528.73
vesicular gland, adult.CNhs10491.51-27F861.69
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.14
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.57
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.07
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.24
whole body, embryo E17.5.CNhs10513.490-9F913.89
whole body, embryo E17.CNhs10517.475-3I510.99
whole body, embryo E18.CNhs10516.493-3B314.04
whole body, neonate N00.CNhs10525.657-19C218.05
whole body, neonate N01.CNhs10576.659-23C614.35
whole body, neonate N06.CNhs10515.692-21D115.00
whole body, neonate N10.CNhs10518.761-6B48.35





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:24790668..24790735,-&oldid=861689"