Personal tools

FFCP PHASE1:Mm9::chr11:54336430..54336441,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=CL:0000988!1.72e-09!32;CL:0002032!1.72e-09!32;CL:0000037!1.72e-09!32;CL:0000566!1.72e-09!32;CL:0000837!1.72e-09!32;CL:0000542!1.22e-08!13;CL:0000051!1.22e-08!13;CL:0000838!1.35e-08!12;CL:0002031!1.83e-08!25;CL:0000084!6.19e-08!11;CL:0000827!6.19e-08!11;CL:0000791!4.06e-07!9;CL:0000789!4.06e-07!9;CL:0002420!4.06e-07!9;CL:0002419!4.06e-07!9;CL:0000790!4.06e-07!9
|ontology_enrichment_celltype=CL:0000988!1.72e-09!32;CL:0002032!1.72e-09!32;CL:0000037!1.72e-09!32;CL:0000566!1.72e-09!32;CL:0000837!1.72e-09!32;CL:0000542!1.22e-08!13;CL:0000051!1.22e-08!13;CL:0000838!1.35e-08!12;CL:0002031!1.83e-08!25;CL:0000084!6.19e-08!11;CL:0000827!6.19e-08!11;CL:0000791!4.06e-07!9;CL:0000789!4.06e-07!9;CL:0002420!4.06e-07!9;CL:0002419!4.06e-07!9;CL:0000790!4.06e-07!9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000926!4.37e-07!193;UBERON:0004120!4.37e-07!193;UBERON:0006603!4.37e-07!193
|phase1_expression=1.28119077683835,0.348975407639361,1.36499771816861,0.60492842261366,1.00179145989269,1.34303417529512,0.934450562382103,3.09895976259783,23.3709278771767,18.4910975794375,9.24577028417727,6.62108919661292,2.22560948910567,3.4093956943409,0.999329285446988,2.63217847606774,2.09868563438444,6.46697438984387,8.08975158273859,7.21462408056651,0.680346321208558,1.88652807281682,2.08959831311148,0.95995453676044,0.68822784320151,1.14846392823004,2.15380998079537,0.861884930743556,0.570070258369122,1.51218077855958,0.665191531965914,2.54012269383853,1.23012957516914,0,1.1554064790051,0.664938581433969,0.816677425049476,3.34825304589526,3.906676722619,1.57057123192139,2.35292595212406,6.83045484958446,2.91306211818692,1.6366586336825,1.62203089951223,1.28482726513177,0,0.218025156380447,0,0.777719596297134,0,0,6.71130424230945,4.35217285206807,4.03312558970957,0.257259436035947,1.14613375975503,0.515672092277442,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.220868540951614,0.489963196859816,0.0958454710182364,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0.908714319998209,0.982430281388212,1.44932244350839,0.860423876981386,0,0,0,1.79210754838934,0.842666520790511,0.340860645156116,0,0.35333957451034,0.985903938436763,5.13305909657271,0,0,0.865964164044856,1.26679932737549,1.01104889002957,1.48439043634778,3.6251303710604,0.890652834388949,0.867426633830679,0.608930956624282,0.922461989024234,0.753613202763113,1.64624189989987,0.628332956648377,1.48316980640624,0.722996784599558,0,0.647067399789637,1.10420759230197,0,1.86391761218122,0.585561594023094,1.04723353406728,0.255457055208591,2.51611761462433,1.19980546198682,2.03312363316904,0.299581278809645,0,0,0.521472960576829,1.02286182932132,0.62336413367868,0.486723789203273,1.83310854930569,1.99051152976149,2.77995034277042,0.210441855886474,0.520481771850815,0,0.360124259610698,0.452114453507145,1.49680298132921,0.768682321709099,0.843315521037559,0.776110112217047,0.215567992932842,0.378212160335639,0.703804496655795,0,1.11218899690239,1.0447564995665,0.823128545631774,1.79130840136644,0,3.60287069960601,1.42081749697796,0.207125772535502,0.234526059981096,0.900310307305074,0.946978942340841,0.787056926989615,1.23413690309903,0.930135779001631,0.804820204198858,1.40118410840603,1.81015834904829,0.820837320395476,1.05389452409612,0.877199924551994,1.3173006917463,1.20785776884335,0.630869845692382,0.205809224758569,0.330418782983798,0.264450566663544,1.2797295032114,0,1.15980715189884,0.605050573870028,0.444756087689741,0.190225626112559,1.42358718463353,0.494096864172033,1.75934646160189,1.98956472041151,0.58489226135736,0.898819408654221,0.864552199498777,1.7922714592893,0.189667900953082,1.37098215131675,2.25415471346161,0.814605311381257,1.74557238450863,0.701358198903186,0.758838445491087,0.295220295959204,0.627994911365499,0.740382983530803,0.889357881261447,0.667380422864376,1.17935397067922,1.34917267430912,0.202860121388503,0.482354319504834,1.01850340712568,0.863088412352432,0.810676133875177,0.823684239564244,4.31304619582064,2.60498663367952,1.24815069245824,1.51547326768267,1.4351793081753,1.4473305640901,1.84753190166605,0.568474235311454,0.325929952884052,0.339490171550376,0.704070744865506,0.502518772325447,0,1.75620283072019,1.7339865851681,0.664394068946325,1.11618338060241,1.47476983244164,1.55416483679306,0.723245292907558,1.50791283939272,1.08781136763742,0,0,0.160550589987792,0.820481806145422,0.819674726883377,2.01976741763498,0.315508219416257,0.780877488593277,0.646270193198397,0.716906393857656,0.445597348164788,0.283076530788832,1.61924280669958,0.584511715822624,0.790575555893047,0,0.709700426041343,1.42452482933804,1.30309567482861,1.81467135269789,0,0.485561272309963,1.51161778482376,0.377210159511796,0,1.22974059177571,1.80899805217755,0.727067458955011,0.712994756769443,0.632073515871632,0,0,1.36175842301515,0.36012218806262,0.129358683782755,0.214337035031592,0.354680467284547,0.891844088010353,0.658196082408484,0.304464949114599,1.87737366450968,0.42366414172764,0.441056796109924,2.80306630000516,1.29171541356724,1.02531972377865,1.90995750405018,2.9545361954111,0,0.370850604021019,1.19609616558497,0.412773735926445,1.11116716421827,1.69531611304222,2.1871076435364,2.51655990527175,3.0596117398894,2.93898049879682,3.31679937130617,0.954670618015114,0.474503990371703,0,1.08005340821801,0,0.87345025498471,0.539457385539283,1.1571483801547,0.26175594198403,0.648074866458964,1.24267862617385,0,1.64468200648377,1.15820943319968,1.16670713006429,1.29159823477731,1.01373675294467,2.11243029562357,1.95306577265925,3.25063967719704,2.41584120826006,0.864090018773596,0.316011120628178,0.405450430580328,0.924398614483445,0.909445760844565,0.537080087002444,0.993406773906324,1.56254084375959,0.886137163047463,0.605798699688886,0.990688486514998,1.10908803650525,1.94915761479505,0.962118416403295,1.8700304349051,0.906921534460845,0.665957860122194,1.16628013592318,0.839423081820392,0.965947970160952,0.93841237725591,1.09890974560359,0.643105137237198,0.501572104035363,0,0.460325236507177,0.572895513439397,0.68741272937475,0,0.755393897389701,0.675022500231806,1.35096360967266,0.906284817968409,0.51776031175182,0.518936737920883,0.399024873401031,0.341467211508268,0.729320151204882,0.838452650511929,0.183843508450014,0.222246727801615,0.206035057238894,1.28367683836726,0.505394423527595,0.25347929989024,1.13175804831646,0.561849044819294,0.384150914429216,1.03383844120104,0,0.695305955669133,0.964546102318525,0,1.17759136107518,0.685738504770831,0.887379030796687,0.238436189947321,0.290692833264657,0.941093804153306,0.761531471025089,0.365855945745545,0.526139422875686,0.950628796921032,0,0.830445126869219,0.29551344712669,0.818462086339379,1.23949472948773,1.54325288784913,0.499621155875892,0.233931608445408,0.429742108096597,1.91288332068843,0.220591419119515,1.15933917810211
|phase1_expression=1.28119077683835,0.348975407639361,1.36499771816861,0.60492842261366,1.00179145989269,1.34303417529512,0.934450562382103,3.09895976259783,23.3709278771767,18.4910975794375,9.24577028417727,6.62108919661292,2.22560948910567,3.4093956943409,0.999329285446988,2.63217847606774,2.09868563438444,6.46697438984387,8.08975158273859,7.21462408056651,0.680346321208558,1.88652807281682,2.08959831311148,0.95995453676044,0.68822784320151,1.14846392823004,2.15380998079537,0.861884930743556,0.570070258369122,1.51218077855958,0.665191531965914,2.54012269383853,1.23012957516914,0,1.1554064790051,0.664938581433969,0.816677425049476,3.34825304589526,3.906676722619,1.57057123192139,2.35292595212406,6.83045484958446,2.91306211818692,1.6366586336825,1.62203089951223,1.28482726513177,0,0.218025156380447,0,0.777719596297134,0,0,6.71130424230945,4.35217285206807,4.03312558970957,0.257259436035947,1.14613375975503,0.515672092277442,0.202316460859598,0,0,0.677689064138264,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0,0.220868540951614,0.489963196859816,0.0958454710182364,0,0,0.383062014255563,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0.908714319998209,0.982430281388212,1.44932244350839,0.860423876981386,0,0,0,1.79210754838934,0.842666520790511,0.340860645156116,0,0.35333957451034,0.985903938436763,5.13305909657271,0,0,0.865964164044856,1.26679932737549,1.01104889002957,1.48439043634778,3.6251303710604,0.890652834388949,0.867426633830679,0.608930956624282,0.922461989024234,0.753613202763113,1.64624189989987,0.628332956648377,1.48316980640624,0.722996784599558,0,0.647067399789637,1.10420759230197,0,1.86391761218122,0.585561594023094,1.04723353406728,0.255457055208591,2.51611761462433,1.19980546198682,2.03312363316904,0.299581278809645,0,0,0.521472960576829,1.02286182932132,0.62336413367868,0.486723789203273,1.83310854930569,1.99051152976149,2.77995034277042,0.210441855886474,0.520481771850815,0,0.360124259610698,0.452114453507145,1.49680298132921,0.768682321709099,0.843315521037559,0.776110112217047,0.215567992932842,0.378212160335639,0.703804496655795,0,1.11218899690239,1.0447564995665,0.823128545631774,1.79130840136644,0,3.60287069960601,1.42081749697796,0.207125772535502,0.234526059981096,0.900310307305074,0.946978942340841,0.787056926989615,1.23413690309903,0.930135779001631,0.804820204198858,1.40118410840603,1.81015834904829,0.820837320395476,1.05389452409612,0.877199924551994,1.3173006917463,1.20785776884335,0.630869845692382,0.205809224758569,0.330418782983798,0.264450566663544,1.2797295032114,0,1.15980715189884,0.605050573870028,0.444756087689741,0.190225626112559,1.42358718463353,0.494096864172033,1.75934646160189,1.98956472041151,0.58489226135736,0.898819408654221,0.864552199498777,1.7922714592893,0.189667900953082,1.37098215131675,2.25415471346161,0.814605311381257,1.74557238450863,0.701358198903186,0.758838445491087,0.295220295959204,0.627994911365499,0.740382983530803,0.889357881261447,0.667380422864376,1.17935397067922,1.34917267430912,0.202860121388503,0.482354319504834,1.01850340712568,0.863088412352432,0.810676133875177,0.823684239564244,4.31304619582064,2.60498663367952,1.24815069245824,1.51547326768267,1.4351793081753,1.4473305640901,1.84753190166605,0.568474235311454,0.325929952884052,0.339490171550376,0.704070744865506,0.502518772325447,0,1.75620283072019,1.7339865851681,0.664394068946325,1.11618338060241,1.47476983244164,1.55416483679306,0.723245292907558,1.50791283939272,1.08781136763742,0,0,0.160550589987792,0.820481806145422,0.819674726883377,2.01976741763498,0.315508219416257,0.780877488593277,0.646270193198397,0.716906393857656,0.445597348164788,0.283076530788832,1.61924280669958,0.584511715822624,0.790575555893047,0,0.709700426041343,1.42452482933804,1.30309567482861,1.81467135269789,0,0.485561272309963,1.51161778482376,0.377210159511796,0,1.22974059177571,1.80899805217755,0.727067458955011,0.712994756769443,0.632073515871632,0,0,1.36175842301515,0.36012218806262,0.129358683782755,0.214337035031592,0.354680467284547,0.891844088010353,0.658196082408484,0.304464949114599,1.87737366450968,0.42366414172764,0.441056796109924,2.80306630000516,1.29171541356724,1.02531972377865,1.90995750405018,2.9545361954111,0,0.370850604021019,1.19609616558497,0.412773735926445,1.11116716421827,1.69531611304222,2.1871076435364,2.51655990527175,3.0596117398894,2.93898049879682,3.31679937130617,0.954670618015114,0.474503990371703,0,1.08005340821801,0,0.87345025498471,0.539457385539283,1.1571483801547,0.26175594198403,0.648074866458964,1.24267862617385,0,1.64468200648377,1.15820943319968,1.16670713006429,1.29159823477731,1.01373675294467,2.11243029562357,1.95306577265925,3.25063967719704,2.41584120826006,0.864090018773596,0.316011120628178,0.405450430580328,0.924398614483445,0.909445760844565,0.537080087002444,0.993406773906324,1.56254084375959,0.886137163047463,0.605798699688886,0.990688486514998,1.10908803650525,1.94915761479505,0.962118416403295,1.8700304349051,0.906921534460845,0.665957860122194,1.16628013592318,0.839423081820392,0.965947970160952,0.93841237725591,1.09890974560359,0.643105137237198,0.501572104035363,0,0.460325236507177,0.572895513439397,0.68741272937475,0,0.755393897389701,0.675022500231806,1.35096360967266,0.906284817968409,0.51776031175182,0.518936737920883,0.399024873401031,0.341467211508268,0.729320151204882,0.838452650511929,0.183843508450014,0.222246727801615,0.206035057238894,1.28367683836726,0.505394423527595,0.25347929989024,1.13175804831646,0.561849044819294,0.384150914429216,1.03383844120104,0,0.695305955669133,0.964546102318525,0,1.17759136107518,0.685738504770831,0.887379030796687,0.238436189947321,0.290692833264657,0.941093804153306,0.761531471025089,0.365855945745545,0.526139422875686,0.950628796921032,0,0.830445126869219,0.29551344712669,0.818462086339379,1.23949472948773,1.54325288784913,0.499621155875892,0.233931608445408,0.429742108096597,1.91288332068843,0.220591419119515,1.15933917810211
|short_description=p3@Rapgef6
|short_description=p3@Rapgef6
}}
}}

Revision as of 15:11, 18 April 2012

Short description:p3@Rapgef6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rapgef6_5end
Coexpression cluster:NA
Association with transcript: -6bp_to_ENSMUST00000041060, ENSMUST00000050145_5end
EntrezGene:Rapgef6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rapgef6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E723.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F218.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.62
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.41
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.09
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.71
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.52
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:54336430..54336441,%2B&oldid=901169"