Personal tools

FFCP PHASE1:Mm9::chr4:144482746..144482773,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:144482746..144482773,+
|short_description=p6@Dhrs3
|description=CAGE_peak_6_at_Dhrs3_5end
|association_with_transcript=16bp_to_ENSMUST00000105744,ENSMUST00000171001,NM_001172424,uc008vrm.2,uc012dov.1_5end
|EntrezGene=20148
|EntrezGene=20148
|HGNC=
|HGNC=
|UniProt=O88876,G5E8W9,B1ART0
|UniProt=O88876,G5E8W9,B1ART0
|association_with_transcript=16bp_to_ENSMUST00000105744,ENSMUST00000171001,NM_001172424,uc008vrm.2,uc012dov.1_5end
|description=CAGE_peak_6_at_Dhrs3_5end
|id=chr4:144482746..144482773,+
|ontology_enrichment_disease=
|phase1_expression=1.44133962394315,0.348975407639361,0,0.60492842261366,0.500895729946347,0.33575854382378,0.934450562382103,0.645616617207881,0,0,0,0,0,0,0.666219523631325,1.82227740650843,1.39912375625629,0,0.274228867211478,0,3.23164502574065,1.39007331681239,0.783599367416806,0.799962113967033,0.68822784320151,0,0,0.861884930743556,0.380046838912748,0,0.443461021310609,0,1.23012957516914,0,1.1554064790051,0.498703936075477,1.63335485009895,2.09265815368454,3.906676722619,2.61761871986899,1.76469446409304,1.36609096991689,1.94204141212461,0.503587271902309,1.52065396829272,6.79122982998222,28.1660883965294,3.2703773457067,6.15121311656521,13.9989527333484,4.05960622713551,2.87505128729943,0.335565212115473,0,0,21.0952737549477,24.0688089548556,8.25075347643908,0.809265843438391,2.11596391708813,1.26766280701236,10.165335962074,16.8966011261116,40.495487277663,42.5212535903799,49.733608046227,18.5752068521411,16.5213871288268,0.103689612308478,0.270011876663381,0.420649922702764,1.42825492201902,1.54607978666129,0.489963196859816,0,0,2.20231761998777,1.65993539510744,1.84327839907492,0.395658863190582,0.457438218012048,1.56274011167028,1.67509799400829,1.68828783009504,2.29197371665215,1.17851434189467,1.13897344639282,0.372798891650601,1.74170244666323,6.19686792875641,53.6249304098104,9.46466264679525,0.679971333707751,1.61910957491345,1.29955283489534,0,2.94933282276679,6.81721290312231,6.75443611967459,6.00677276667578,0.985903938436763,15.3991772897181,5.09610479413291,7.11066703153331,7.36069539438128,4.56047757855178,7.58286667522175,2.39786147410026,1.29468941823586,2.82040064223167,2.77576522825817,1.52232739156071,2.53677046981664,1.95939432718409,2.3517741427141,4.14699751387929,1.48316980640624,7.51916655983541,1.76922110389975,2.42650274921114,2.87093973998512,1.45462575940567,0,0.292780797011547,2.51336048176146,1.02182822083437,3.11519323715393,3.59941638596045,3.04968544975355,0.898743836428936,0.915001205637253,0.502617408451458,0.347648640384553,0,0.20778804455956,0.648965052271031,3.56437773476107,4.47865094196335,1.51633655060205,5.89237196482127,1.82168620147785,0.919608417733892,0.720248519221397,1.05493372485001,1.36072998302656,0.896796041993948,1.87403449119458,3.3631438196072,0.215567992932842,0.945530400839096,3.34307135911503,1.53437012699302,2.50242524303038,1.39300866608867,2.46938563689532,3.58261680273288,4.21327912387941,1.54408744268829,1.70498099637356,1.03562886267751,0.703578179943289,1.2604344302271,0.946978942340841,1.57411385397923,0.925602677324269,0.465067889500816,0.804820204198858,2.56883753207773,2.96207729844265,3.2833492815819,8.91756905004413,7.16379938384128,8.34290438105992,11.0049263383505,0.420579897128254,0.308713837137853,0.330418782983798,0.793351699990633,1.2797295032114,1.39342003116263,1.28867461322093,2.21851877085677,2.44615848229357,1.14135375667535,1.42358718463353,1.64698954724011,1.25667604400135,2.18852119245266,0.779856348476481,0.898819408654221,2.80979464837102,0.796565093017469,3.22435431620239,3.65595240351132,1.1270773567308,4.07302655690629,4.26695471768777,3.36651935473529,5.31186911843761,3.98547399544926,5.80895293013087,5.18268088471562,1.77871576252289,0.667380422864376,0.786235980452812,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,1.72617682470486,2.7562988551756,3.29473695825698,7.18841032636773,3.72140947668503,4.36852742360385,2.27320990152401,2.51156378930677,0.964887042726734,5.72734889516475,0.37898282354097,0.325929952884052,0.169745085775188,0.938760993154008,3.51763140627813,2.38043640886014,3.70753930929818,2.83743259391144,1.10732344824387,4.30527875375215,4.58817281204066,7.42545422023351,8.10034728056465,82.9352061665997,61.4613422715142,1.47529281905711,2.48343071674259,0.642202359951168,0.468846746368813,0.491804836130026,6.05930225290495,19.5615096038079,16.7888660047555,22.1886099664783,31.5438813297369,28.5182302825464,26.0430408325726,24.2886421004937,24.5494920645502,16.602086673754,0.321321316421807,2.98074178937364,2.49291845134157,3.09485222771795,2.96946221350564,0,0.971122544619926,0.906970670894253,0.188605079755898,0.590603785761546,0.614870295887855,0.775284879504663,1.09060118843252,1.06949213515416,0.948110273807448,0,2.06271086496374,0.680879211507576,1.44048875225048,1.94038025674132,2.35770738534752,1.77340233642274,6.77801506887868,6.2528627828806,10.3518082698964,1.64270195644597,0.63549621259146,1.54369878638473,2.80306630000516,1.29171541356724,2.29189114726992,2.74556391207214,2.62625439592098,0.874442509889552,0.18542530201051,0.683483523191411,0.619160603889667,1.85194527369712,2.82552685507037,0.820165366326151,0.686334519619568,1.69978429993855,2.79902904647316,1.24379976423981,1.90934123603023,1.58167996790568,0.609958401380546,2.05210147561422,1.46361807210128,1.09181281873089,2.56242258131159,2.39695021603474,2.6175594198403,2.33306951925227,4.34937519160848,0,2.69129782879162,0.66183396182839,2.72231663681667,2.58319646955462,1.35164900392623,1.05621514781179,1.8228613878153,0.838874755405687,0.241584120826006,0.576060012515731,3.79213344753814,1.82452693761148,0.821687657318618,1.16928740680016,0.716106782669926,1.39076948346885,2.16351809135944,3.54454865218985,3.73575864808146,2.057583779685,3.7305688500631,4.87289403698762,2.50150788264857,5.14258369598903,1.36038230169127,0,0.0897138566094757,0,7.72758376128762,3.75364950902364,1.09890974560359,3.64426244434412,2.00628841614145,0.564751842617067,0,0.572895513439397,0.68741272937475,2.74033007908257,3.0215755895588,1.35004500046361,0.900642406448441,2.26571204492102,1.03552062350364,0.31136204275253,1.19707462020309,1.70733605754134,1.21553358534147,0.419226325255965,1.83843508450014,2.00022055021454,1.23621034343337,1.60459604795908,1.01078884705519,2.28131369901216,1.69763707247469,3.27745276144588,2.36893063898016,2.12511235135769,1.90517476513229,3.36064545240081,2.12200142510076,2.47251540481984,3.67997300335993,2.05721551431249,2.66213709239006,2.62279808942053,3.34296758254356,3.19971893412124,3.04612588410035,2.74391959309159,1.57841826862706,2.17286582153379,1.12228454331548,2.49133538060766,3.25064791839359,2.86461730218783,3.71848418846318,1.54325288784913,1.49886346762768,3.04111090979031,3.22306581072447,2.29545998482612,4.19123696327079,3.01428186306548
|phase1_expression=1.44133962394315,0.348975407639361,0,0.60492842261366,0.500895729946347,0.33575854382378,0.934450562382103,0.645616617207881,0,0,0,0,0,0,0.666219523631325,1.82227740650843,1.39912375625629,0,0.274228867211478,0,3.23164502574065,1.39007331681239,0.783599367416806,0.799962113967033,0.68822784320151,0,0,0.861884930743556,0.380046838912748,0,0.443461021310609,0,1.23012957516914,0,1.1554064790051,0.498703936075477,1.63335485009895,2.09265815368454,3.906676722619,2.61761871986899,1.76469446409304,1.36609096991689,1.94204141212461,0.503587271902309,1.52065396829272,6.79122982998222,28.1660883965294,3.2703773457067,6.15121311656521,13.9989527333484,4.05960622713551,2.87505128729943,0.335565212115473,0,0,21.0952737549477,24.0688089548556,8.25075347643908,0.809265843438391,2.11596391708813,1.26766280701236,10.165335962074,16.8966011261116,40.495487277663,42.5212535903799,49.733608046227,18.5752068521411,16.5213871288268,0.103689612308478,0.270011876663381,0.420649922702764,1.42825492201902,1.54607978666129,0.489963196859816,0,0,2.20231761998777,1.65993539510744,1.84327839907492,0.395658863190582,0.457438218012048,1.56274011167028,1.67509799400829,1.68828783009504,2.29197371665215,1.17851434189467,1.13897344639282,0.372798891650601,1.74170244666323,6.19686792875641,53.6249304098104,9.46466264679525,0.679971333707751,1.61910957491345,1.29955283489534,0,2.94933282276679,6.81721290312231,6.75443611967459,6.00677276667578,0.985903938436763,15.3991772897181,5.09610479413291,7.11066703153331,7.36069539438128,4.56047757855178,7.58286667522175,2.39786147410026,1.29468941823586,2.82040064223167,2.77576522825817,1.52232739156071,2.53677046981664,1.95939432718409,2.3517741427141,4.14699751387929,1.48316980640624,7.51916655983541,1.76922110389975,2.42650274921114,2.87093973998512,1.45462575940567,0,0.292780797011547,2.51336048176146,1.02182822083437,3.11519323715393,3.59941638596045,3.04968544975355,0.898743836428936,0.915001205637253,0.502617408451458,0.347648640384553,0,0.20778804455956,0.648965052271031,3.56437773476107,4.47865094196335,1.51633655060205,5.89237196482127,1.82168620147785,0.919608417733892,0.720248519221397,1.05493372485001,1.36072998302656,0.896796041993948,1.87403449119458,3.3631438196072,0.215567992932842,0.945530400839096,3.34307135911503,1.53437012699302,2.50242524303038,1.39300866608867,2.46938563689532,3.58261680273288,4.21327912387941,1.54408744268829,1.70498099637356,1.03562886267751,0.703578179943289,1.2604344302271,0.946978942340841,1.57411385397923,0.925602677324269,0.465067889500816,0.804820204198858,2.56883753207773,2.96207729844265,3.2833492815819,8.91756905004413,7.16379938384128,8.34290438105992,11.0049263383505,0.420579897128254,0.308713837137853,0.330418782983798,0.793351699990633,1.2797295032114,1.39342003116263,1.28867461322093,2.21851877085677,2.44615848229357,1.14135375667535,1.42358718463353,1.64698954724011,1.25667604400135,2.18852119245266,0.779856348476481,0.898819408654221,2.80979464837102,0.796565093017469,3.22435431620239,3.65595240351132,1.1270773567308,4.07302655690629,4.26695471768777,3.36651935473529,5.31186911843761,3.98547399544926,5.80895293013087,5.18268088471562,1.77871576252289,0.667380422864376,0.786235980452812,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,1.72617682470486,2.7562988551756,3.29473695825698,7.18841032636773,3.72140947668503,4.36852742360385,2.27320990152401,2.51156378930677,0.964887042726734,5.72734889516475,0.37898282354097,0.325929952884052,0.169745085775188,0.938760993154008,3.51763140627813,2.38043640886014,3.70753930929818,2.83743259391144,1.10732344824387,4.30527875375215,4.58817281204066,7.42545422023351,8.10034728056465,82.9352061665997,61.4613422715142,1.47529281905711,2.48343071674259,0.642202359951168,0.468846746368813,0.491804836130026,6.05930225290495,19.5615096038079,16.7888660047555,22.1886099664783,31.5438813297369,28.5182302825464,26.0430408325726,24.2886421004937,24.5494920645502,16.602086673754,0.321321316421807,2.98074178937364,2.49291845134157,3.09485222771795,2.96946221350564,0,0.971122544619926,0.906970670894253,0.188605079755898,0.590603785761546,0.614870295887855,0.775284879504663,1.09060118843252,1.06949213515416,0.948110273807448,0,2.06271086496374,0.680879211507576,1.44048875225048,1.94038025674132,2.35770738534752,1.77340233642274,6.77801506887868,6.2528627828806,10.3518082698964,1.64270195644597,0.63549621259146,1.54369878638473,2.80306630000516,1.29171541356724,2.29189114726992,2.74556391207214,2.62625439592098,0.874442509889552,0.18542530201051,0.683483523191411,0.619160603889667,1.85194527369712,2.82552685507037,0.820165366326151,0.686334519619568,1.69978429993855,2.79902904647316,1.24379976423981,1.90934123603023,1.58167996790568,0.609958401380546,2.05210147561422,1.46361807210128,1.09181281873089,2.56242258131159,2.39695021603474,2.6175594198403,2.33306951925227,4.34937519160848,0,2.69129782879162,0.66183396182839,2.72231663681667,2.58319646955462,1.35164900392623,1.05621514781179,1.8228613878153,0.838874755405687,0.241584120826006,0.576060012515731,3.79213344753814,1.82452693761148,0.821687657318618,1.16928740680016,0.716106782669926,1.39076948346885,2.16351809135944,3.54454865218985,3.73575864808146,2.057583779685,3.7305688500631,4.87289403698762,2.50150788264857,5.14258369598903,1.36038230169127,0,0.0897138566094757,0,7.72758376128762,3.75364950902364,1.09890974560359,3.64426244434412,2.00628841614145,0.564751842617067,0,0.572895513439397,0.68741272937475,2.74033007908257,3.0215755895588,1.35004500046361,0.900642406448441,2.26571204492102,1.03552062350364,0.31136204275253,1.19707462020309,1.70733605754134,1.21553358534147,0.419226325255965,1.83843508450014,2.00022055021454,1.23621034343337,1.60459604795908,1.01078884705519,2.28131369901216,1.69763707247469,3.27745276144588,2.36893063898016,2.12511235135769,1.90517476513229,3.36064545240081,2.12200142510076,2.47251540481984,3.67997300335993,2.05721551431249,2.66213709239006,2.62279808942053,3.34296758254356,3.19971893412124,3.04612588410035,2.74391959309159,1.57841826862706,2.17286582153379,1.12228454331548,2.49133538060766,3.25064791839359,2.86461730218783,3.71848418846318,1.54325288784913,1.49886346762768,3.04111090979031,3.22306581072447,2.29545998482612,4.19123696327079,3.01428186306548
|short_description=p6@Dhrs3
}}
}}

Revision as of 15:29, 18 April 2012

Short description:p6@Dhrs3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Dhrs3_5end
Coexpression cluster:NA
Association with transcript: 16bp_to_ENSMUST00000105744, ENSMUST00000171001, NM_001172424, uc008vrm.2, uc012dov.1_5end
EntrezGene:Dhrs3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Dhrs3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.10
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E124.07
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C740.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E742.52
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D249.73
Mouse Microglia, donor1.CNhs12629.11718-123C818.58
Mouse Microglia, donor2.CNhs12634.11736-123E816.52
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F96.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G353.62
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H17.52
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.56
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G18.92
heart, neonate N20.CNhs11127.821-26I67.16
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D211.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G73.37
kidney, neonate N10.CNhs11206.758-6D55.31
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F35.81
kidney, neonate N30.CNhs11203.1385-42H15.18
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B15.73
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C77.43
lung, neonate N30.CNhs11133.1394-42H28.10
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A182.94
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A161.46
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.56
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.79
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D731.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D828.52
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D424.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D524.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.60
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F66.78
pituitary gland, embryo E17.CNhs11039.1265-44F56.25
pituitary gland, neonate N00.CNhs11190.1308-22E910.35
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H32.29
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C43.74
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E43.73
thymus, neonate N20.CNhs11186.820-7A24.87
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G25.14
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:144482746..144482773,%2B&oldid=903960"