Personal tools

FFCP PHASE1:Mm9::chr2:28980663..28980698,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Setx_5end
|description=CAGE_peak_1_at_Setx_5end
|id=chr2:28980663..28980698,+
|id=chr2:28980663..28980698,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=12.4916100741739,28.6159834264276,42.3149292632269,24.4996011158532,28.0501608769954,21.1527882608981,19.6234618100242,52.6823159641631,23.5117165993283,25.0449043164533,16.0944890131975,13.0028619162398,78.9235364982858,68.712436301332,17.3217076144145,23.4871310172198,18.1886088313318,45.111089646228,48.9498527972487,43.2877444833991,8.75945888556019,10.6241317784947,13.0599894569468,16.3192271249275,17.6645146421721,33.8796858827862,28.4302917464989,28.2267314818515,14.251756459228,25.2030129759931,16.1863272778372,6.35030673459631,6.76571266343027,0,14.731432607315,9.14290549471708,8.77928231928187,43.5272895966384,27.346737058333,38.7407570540611,39.999741186109,35.5183652178392,30.5871522409627,9.56815816614387,12.4693625400003,16.8863011988747,1.56478268869608,4.14247797122848,2.41654801007919,3.88859798148567,2.37976916763116,0,42.9523471507805,55.1275227928622,63.5217280379257,16.4646039063006,13.4670716771216,17.0171790451556,4.45096213891115,3.70293685490423,6.97214543856797,3.72728985276045,5.33576877666684,1.7997994345628,6.92206453796882,2.1314403448383,1.49800055259202,4.61061966385865,5.80661828927475,2.70011876663381,5.25812403378455,5.14171771926846,5.30084498283872,3.1847607795888,3.92966431174769,3.67687514644008,2.20231761998777,5.87361755191863,6.91229399653096,3.16527090552465,4.29991924931325,2.6045668527838,5.30447698102624,10.6924895906019,9.16789486660861,13.5529149317887,12.1015928679237,4.47358669980721,9.39004797331482,15.1898835814639,16.232411367294,14.6272059086836,4.75979933595425,14.0322829825832,11.695975514058,15.2329141613094,10.5333315098814,14.657007741713,11.1707981979234,12.0135455333516,10.9857867425811,20.5322363862909,20.3844191765317,35.5533351576666,10.1750789275271,11.4011939463794,9.0994400102661,12.1034912502204,55.9305828677891,14.398887489288,8.67426633830679,8.22056791442781,10.1470818792666,13.7157602902887,15.2865319276416,9.67632753238501,12.3597483867187,17.0627241165496,15.9229899350977,13.426648545635,19.4340536245146,16.0008833534623,18.6391761218122,7.31951992528868,11.51956887474,13.0283098156382,16.534487181817,13.197860081855,11.690460890722,7.48953197024113,9.15001205637253,6.15706325353036,5.56237824615285,6.13717097592793,7.48036960414416,8.76102820565891,11.7115268427864,20.5271501506653,17.9433158487909,13.4682787767343,6.50602214813519,7.35686734187113,7.74267158163002,6.0281927134286,12.3826428455417,9.09607414022434,11.9938207436453,9.8307280880826,6.46703978798527,7.18603104637713,8.62160508403349,7.67185063496512,9.73165372289593,8.70630416305416,12.7584924572925,8.95654200683219,14.7464769335779,11.8380037272769,8.80906848126337,11.3919174894526,9.14651633926275,9.18316513451176,8.28606574548236,10.4285042826124,11.1072321278912,9.30135779001631,12.3405764643825,15.7633212195679,19.5826221397042,15.595909087514,19.6186519100971,18.1287984407412,16.6858087621198,18.2520729514106,3.57492912559016,7.82075054082562,14.2080076683033,12.6936271998501,5.97207101498655,9.28946687441754,9.53619213783491,9.88249270654378,12.008414367623,7.41879941838981,8.54152310780121,12.3524216043008,15.5827829456167,9.74886713001639,11.6978452271472,20.6728463990471,14.2651112917298,14.5373129475688,3.03468641524931,8.45438993311993,15.7790829942313,8.75700709734851,9.11576689687841,14.1674356178443,12.0149420536089,15.0562350939194,12.55989822731,10.8589504251184,13.0439155918346,9.67701613153345,10.614185736113,10.1187950573184,12.9830477688642,9.88826354984909,9.67578236769395,12.083237772934,17.5106044917038,10.7078951143352,25.8782771749238,13.7692150637346,13.1055822708115,10.6083128737787,8.7904732625737,20.7450714186248,19.7685913478267,9.66406200029472,10.4297584922897,10.6939404038369,7.97946844180907,11.5579317634853,11.4260947625287,16.0009591243395,15.9211495547253,15.2810635857655,19.2940270075559,18.0249646187312,19.5134029508462,17.6471851469444,18.0949540727127,12.5098307278303,16.2282210096282,16.0043312856745,8.18808008937739,9.37693492737625,9.83609672260053,16.6630811954886,10.4117712407365,10.1514073517126,9.69405289797595,10.9925647058174,12.2539270745317,11.6061377623421,9.31064613852257,8.47541987942804,9.88219444866309,6.42642632843614,20.2974321847824,7.83488656135923,13.3567306669932,15.3422214364458,7.96470830039777,5.82673526771955,5.44182402536552,7.54420319023592,6.20133975049623,11.9899707698132,18.6068371081119,11.9966130727577,12.1209108650805,12.6414703174326,11.5960469432499,10.3135543248187,20.4263763452273,7.20244376125241,3.23396709456886,8.78781843629528,9.04435191575595,10.167022603318,9.54384319492302,11.2652031172402,10.7948985709307,8.04961869282517,12.1290618930229,15.0046490176747,12.9171541356724,14.9576053821827,16.1152664404234,14.2802582778203,11.3677526285642,8.71498919449395,22.2132145037208,10.9385040020508,11.8524497516615,17.706634958441,22.0077706630851,20.8188137617936,17.677756719361,20.0130576822831,21.5591959134901,2.86401185404534,9.64824780422463,10.5726122905961,7.88438987999149,9.61806161666556,7.64268973111622,12.1377911746339,13.7204736504058,12.8260411572175,13.9984171155136,13.6694648879124,4.50954350947352,14.353588420222,8.27292452285488,12.444876054019,10.2036260547408,14.1923145412254,13.378725205616,20.7024971901881,15.7289016638566,8.69702834973622,8.06484017522023,27.1769563740233,8.10900861160657,7.80603274452687,10.6535074841792,18.0816962624156,21.0602236068141,23.197721757354,21.8580500218374,25.3425789369851,24.9196257761849,26.5172866909891,32.2585585248581,31.1726366914667,31.3230097846605,14.2840141677583,27.526258218384,30.1438558207838,18.2994231836845,12.3641340180602,17.8298351678623,18.4983140509938,8.57473516316263,15.5487352250963,5.0827665835536,2.76195141904306,4.58316410751517,3.78077001156113,1.37016503954128,9.06472676867641,4.72515750162264,4.5032120322422,5.89085131679466,2.07104124700728,8.82192454465502,2.39414924040619,6.82934423016537,9.48116196566347,7.96530017986333,8.82448840560068,10.8900896622791,14.6284890639615,10.2694147069381,13.1402550117175,6.59046179714623,9.80856975207596,10.1132828067473,9.92389862275474,11.0850455084334,6.19181798667996,12.9790445058238,11.5745532278223,8.24171801606613,9.27353196846703,7.54312355247914,8.5188386956482,11.4449371174714,10.9009812474246,10.9166881281784,9.47683608386777,11.1586063452391,9.2074399003245,11.5433496768983,15.1508413347589,12.6939469392866,12.0175468498187,8.18462086339379,9.76102099471586,12.1531164918119,5.74564329257276,10.5269223800434,13.9666185131394,10.7121465958552,14.3384422427685,10.2021847672985
|phase1_expression=12.4916100741739,28.6159834264276,42.3149292632269,24.4996011158532,28.0501608769954,21.1527882608981,19.6234618100242,52.6823159641631,23.5117165993283,25.0449043164533,16.0944890131975,13.0028619162398,78.9235364982858,68.712436301332,17.3217076144145,23.4871310172198,18.1886088313318,45.111089646228,48.9498527972487,43.2877444833991,8.75945888556019,10.6241317784947,13.0599894569468,16.3192271249275,17.6645146421721,33.8796858827862,28.4302917464989,28.2267314818515,14.251756459228,25.2030129759931,16.1863272778372,6.35030673459631,6.76571266343027,0,14.731432607315,9.14290549471708,8.77928231928187,43.5272895966384,27.346737058333,38.7407570540611,39.999741186109,35.5183652178392,30.5871522409627,9.56815816614387,12.4693625400003,16.8863011988747,1.56478268869608,4.14247797122848,2.41654801007919,3.88859798148567,2.37976916763116,0,42.9523471507805,55.1275227928622,63.5217280379257,16.4646039063006,13.4670716771216,17.0171790451556,4.45096213891115,3.70293685490423,6.97214543856797,3.72728985276045,5.33576877666684,1.7997994345628,6.92206453796882,2.1314403448383,1.49800055259202,4.61061966385865,5.80661828927475,2.70011876663381,5.25812403378455,5.14171771926846,5.30084498283872,3.1847607795888,3.92966431174769,3.67687514644008,2.20231761998777,5.87361755191863,6.91229399653096,3.16527090552465,4.29991924931325,2.6045668527838,5.30447698102624,10.6924895906019,9.16789486660861,13.5529149317887,12.1015928679237,4.47358669980721,9.39004797331482,15.1898835814639,16.232411367294,14.6272059086836,4.75979933595425,14.0322829825832,11.695975514058,15.2329141613094,10.5333315098814,14.657007741713,11.1707981979234,12.0135455333516,10.9857867425811,20.5322363862909,20.3844191765317,35.5533351576666,10.1750789275271,11.4011939463794,9.0994400102661,12.1034912502204,55.9305828677891,14.398887489288,8.67426633830679,8.22056791442781,10.1470818792666,13.7157602902887,15.2865319276416,9.67632753238501,12.3597483867187,17.0627241165496,15.9229899350977,13.426648545635,19.4340536245146,16.0008833534623,18.6391761218122,7.31951992528868,11.51956887474,13.0283098156382,16.534487181817,13.197860081855,11.690460890722,7.48953197024113,9.15001205637253,6.15706325353036,5.56237824615285,6.13717097592793,7.48036960414416,8.76102820565891,11.7115268427864,20.5271501506653,17.9433158487909,13.4682787767343,6.50602214813519,7.35686734187113,7.74267158163002,6.0281927134286,12.3826428455417,9.09607414022434,11.9938207436453,9.8307280880826,6.46703978798527,7.18603104637713,8.62160508403349,7.67185063496512,9.73165372289593,8.70630416305416,12.7584924572925,8.95654200683219,14.7464769335779,11.8380037272769,8.80906848126337,11.3919174894526,9.14651633926275,9.18316513451176,8.28606574548236,10.4285042826124,11.1072321278912,9.30135779001631,12.3405764643825,15.7633212195679,19.5826221397042,15.595909087514,19.6186519100971,18.1287984407412,16.6858087621198,18.2520729514106,3.57492912559016,7.82075054082562,14.2080076683033,12.6936271998501,5.97207101498655,9.28946687441754,9.53619213783491,9.88249270654378,12.008414367623,7.41879941838981,8.54152310780121,12.3524216043008,15.5827829456167,9.74886713001639,11.6978452271472,20.6728463990471,14.2651112917298,14.5373129475688,3.03468641524931,8.45438993311993,15.7790829942313,8.75700709734851,9.11576689687841,14.1674356178443,12.0149420536089,15.0562350939194,12.55989822731,10.8589504251184,13.0439155918346,9.67701613153345,10.614185736113,10.1187950573184,12.9830477688642,9.88826354984909,9.67578236769395,12.083237772934,17.5106044917038,10.7078951143352,25.8782771749238,13.7692150637346,13.1055822708115,10.6083128737787,8.7904732625737,20.7450714186248,19.7685913478267,9.66406200029472,10.4297584922897,10.6939404038369,7.97946844180907,11.5579317634853,11.4260947625287,16.0009591243395,15.9211495547253,15.2810635857655,19.2940270075559,18.0249646187312,19.5134029508462,17.6471851469444,18.0949540727127,12.5098307278303,16.2282210096282,16.0043312856745,8.18808008937739,9.37693492737625,9.83609672260053,16.6630811954886,10.4117712407365,10.1514073517126,9.69405289797595,10.9925647058174,12.2539270745317,11.6061377623421,9.31064613852257,8.47541987942804,9.88219444866309,6.42642632843614,20.2974321847824,7.83488656135923,13.3567306669932,15.3422214364458,7.96470830039777,5.82673526771955,5.44182402536552,7.54420319023592,6.20133975049623,11.9899707698132,18.6068371081119,11.9966130727577,12.1209108650805,12.6414703174326,11.5960469432499,10.3135543248187,20.4263763452273,7.20244376125241,3.23396709456886,8.78781843629528,9.04435191575595,10.167022603318,9.54384319492302,11.2652031172402,10.7948985709307,8.04961869282517,12.1290618930229,15.0046490176747,12.9171541356724,14.9576053821827,16.1152664404234,14.2802582778203,11.3677526285642,8.71498919449395,22.2132145037208,10.9385040020508,11.8524497516615,17.706634958441,22.0077706630851,20.8188137617936,17.677756719361,20.0130576822831,21.5591959134901,2.86401185404534,9.64824780422463,10.5726122905961,7.88438987999149,9.61806161666556,7.64268973111622,12.1377911746339,13.7204736504058,12.8260411572175,13.9984171155136,13.6694648879124,4.50954350947352,14.353588420222,8.27292452285488,12.444876054019,10.2036260547408,14.1923145412254,13.378725205616,20.7024971901881,15.7289016638566,8.69702834973622,8.06484017522023,27.1769563740233,8.10900861160657,7.80603274452687,10.6535074841792,18.0816962624156,21.0602236068141,23.197721757354,21.8580500218374,25.3425789369851,24.9196257761849,26.5172866909891,32.2585585248581,31.1726366914667,31.3230097846605,14.2840141677583,27.526258218384,30.1438558207838,18.2994231836845,12.3641340180602,17.8298351678623,18.4983140509938,8.57473516316263,15.5487352250963,5.0827665835536,2.76195141904306,4.58316410751517,3.78077001156113,1.37016503954128,9.06472676867641,4.72515750162264,4.5032120322422,5.89085131679466,2.07104124700728,8.82192454465502,2.39414924040619,6.82934423016537,9.48116196566347,7.96530017986333,8.82448840560068,10.8900896622791,14.6284890639615,10.2694147069381,13.1402550117175,6.59046179714623,9.80856975207596,10.1132828067473,9.92389862275474,11.0850455084334,6.19181798667996,12.9790445058238,11.5745532278223,8.24171801606613,9.27353196846703,7.54312355247914,8.5188386956482,11.4449371174714,10.9009812474246,10.9166881281784,9.47683608386777,11.1586063452391,9.2074399003245,11.5433496768983,15.1508413347589,12.6939469392866,12.0175468498187,8.18462086339379,9.76102099471586,12.1531164918119,5.74564329257276,10.5269223800434,13.9666185131394,10.7121465958552,14.3384422427685,10.2021847672985
|short_description=p1@Setx
|short_description=p1@Setx
}}
}}

Revision as of 17:07, 18 April 2012

Short description:p1@Setx
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Setx_5end
Coexpression cluster:NA
Association with transcript: 151bp_to_ENSMUST00000061578, NM_198033, uc008izl.1, uc008izm.1_5end
EntrezGene:Setx
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Setx

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I528.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I642.31
CD326+ enterocyte, pool1.CNhs13542.11848-124I324.50
CD326+ enterocyte, pool2.CNhs13197.11849-124I428.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.62
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E952.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E723.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F225.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E616.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F113.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E478.92
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E868.71
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A117.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A323.49
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A518.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A245.11
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A448.95
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A643.29
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.06
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.66
GP2+ M cell, pool1.CNhs13228.11845-124H933.88
GP2+ M cell, pool2.CNhs13231.11846-124I128.43
GP2+ M cell, pool3.CNhs13240.11847-124I228.23
Ileum epithelium, pool1.CNhs13199.10252-104B914.25
Ileum epithelium, pool2.CNhs13232.10253-104C125.20
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.19
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G843.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H127.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H338.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G940.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H235.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H430.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A242.95
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I955.13
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A163.52
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.46
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.02
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D99.39
Mouse Schwann, donor2.CNhs12573.11746-123F915.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.03
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.23
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I714.66
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H120.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.18
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.40
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.10
accessory axillary lymph node, adult.CNhs10475.1063-29H955.93
adrenal gland, adult.CNhs10508.49-24D714.40
adrenal gland, embryo E14.CNhs11038.406-44C58.67
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I110.15
adrenal gland, embryo E18.CNhs11026.1262-18F513.72
adrenal gland, neonate N00.CNhs11191.1311-23C115.29
adrenal gland, neonate N25.CNhs11223.1377-27I39.68
amnion, adult pregnant day17.5.CNhs10488.583-22A812.36
aorta, adult.CNhs10498.46-23H117.06
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F513.43
bone (os femoris), neonate N16.CNhs11225.1525-43A619.43
bone (os femoris), neonate N20.CNhs11195.1350-25C316.00
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I211.52
colon, adult.CNhs10468.36-18H713.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.53
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.69
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F16.16
cortex, adult.CNhs10473.12-14D55.56
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.53
epididymis, adult.CNhs10490.58-23B217.94
eyeball, adult.CNhs10484.31-12G413.47
eyeball, embryo E12.CNhs11016.345-16C66.51
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C97.74
eyeball, embryo E17.CNhs11023.1261-18D46.03
eyeball, neonate N00.CNhs11207.633-15C612.38
eyeball, neonate N01.CNhs11140.1532-43E79.10
eyeball, neonate N02.CNhs11205.1551-44G811.99
eyeball, neonate N16.CNhs11188.777-19A29.83
forelimb, embryo E11.CNhs10596.335-25E26.47
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E28.62
forelimb, embryo E14.CNhs10577.413-26A87.67
forelimb, embryo E15.CNhs11007.437-20E79.73
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B512.76
gonad, embryo E13.CNhs11044.1564-45I68.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C814.75
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.84
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.81
heart, embryo E11.CNhs10586.331-24E911.39
heart, embryo E12.CNhs11015.353-12F59.15
heart, embryo E13.CNhs11013.376-3I99.18
heart, embryo E14.CNhs10597.403-26D48.29
heart, embryo E15.CNhs11017.431-16C810.43
heart, embryo E16.CNhs11021.457-17C611.11
heart, embryo E17.CNhs11025.479-18E59.30
heart, embryo E18.CNhs11030.1283-20G312.34
heart, neonate N00.CNhs11213.639-21E315.76
heart, neonate N03.CNhs11221.1349-25I219.58
heart, neonate N10.CNhs11118.749-24G115.60
heart, neonate N16.CNhs11209.782-15G119.62
heart, neonate N20.CNhs11127.821-26I618.13
heart, neonate N25.CNhs11196.1351-25D316.69
heart, neonate N30.CNhs11202.1390-42D218.25
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G17.82
intestinal mucosa, adult.CNhs10506.860-29I314.21
intestine, adult.CNhs10496.178-9A312.69
intestine, embryo E12.CNhs11019.1251-16I55.97
intestine, embryo E13.CNhs11010.381-16D59.29
intestine, embryo E15.CNhs10602.976-16D89.54
intestine, embryo E16.CNhs10585.463-22H49.88
intestine, embryo E17.CNhs10582.482-18D312.01
intestine, embryo E18.CNhs10526.1289-20F77.42
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E912.35
intestine, neonate N06.CNhs11102.688-20B815.58
intestine, neonate N07.CNhs11095.720-20F29.75
intestine, neonate N10.CNhs11098.755-23A511.70
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E314.27
intestine, neonate N30.CNhs11131.1384-42G114.54
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F88.45
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I28.76
kidney, embryo E18.CNhs11001.1288-20C79.12
kidney, neonate N00.CNhs11214.646-21G714.17
kidney, neonate N10.CNhs11206.758-6D512.01
kidney, neonate N20.CNhs11113.832-19I115.06
kidney, neonate N25.CNhs11122.1353-25F312.56
kidney, neonate N30.CNhs11203.1385-42H110.86
liver, adult pregnant day01.CNhs10466.508-5B213.04
liver, embryo E12.CNhs10601.355-15F89.68
liver, embryo E13.CNhs10524.378-3H610.61
liver, embryo E14.CNhs10594.409-16E110.12
liver, embryo E15.CNhs10520.433-16D712.98
liver, embryo E16.CNhs10523.462-17F59.89
liver, embryo E17.CNhs10510.481-18A39.68
liver, embryo E18.CNhs10579.499-43G412.08
liver, neonate N00.CNhs11117.641-24F417.51
liver, neonate N03.CNhs11123.1345-25G210.71
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H213.77
liver, neonate N10.CNhs11115.751-24B913.11
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H18.79
liver, neonate N30.CNhs11106.1382-42D120.75
lung, adult.CNhs10474.28-22B119.77
lung, embryo E12.CNhs10522.354-16G29.66
lung, embryo E14.CNhs10604.404-26F810.43
lung, embryo E15.CNhs11020.432-17C510.69
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A611.56
lung, embryo E18.CNhs10583.1287-20I611.43
lung, neonate N00.CNhs11224.640-42C616.00
lung, neonate N06.CNhs11212.683-20E515.92
lung, neonate N07.CNhs11111.715-19A315.28
lung, neonate N10.CNhs11219.750-23E619.29
lung, neonate N20.CNhs11109.822-18A418.02
lung, neonate N25.CNhs11119.1359-25C719.51
lung, neonate N30.CNhs11133.1394-42H217.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A112.51
mammary gland, adult lactating day02.CNhs10480.595-22B616.23
mammary gland, adult pregnant day19.CNhs10476.588-5H216.00
medulla oblongata, adult.CNhs10477.17-12C28.19
medulla oblongata, neonate N30.CNhs11200.1396-42A39.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.84
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.66
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.69
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.99
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I720.30
ovary, embryo E18.CNhs11040.505-44H77.83
ovary, neonate N00.CNhs11217.1299-22I413.36
oviduct, adult pregnant day01.CNhs10500.988-6G615.34
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I711.99
pancreas, neonate N00.CNhs11105.645-26G918.61
pancreas, neonate N01.CNhs11138.1531-43D712.00
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G820.43
pituitary gland, embryo E12.CNhs11018.346-16E67.20
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B99.04
pituitary gland, embryo E16.CNhs11036.449-43F610.17
pituitary gland, embryo E17.CNhs11039.1265-44F59.54
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I710.79
placenta, adult pregnant day17.CNhs10464.577-18G38.05
prostate, adult.CNhs10470.859-1F812.13
skin, adult.CNhs10492.30-1C315.00
skin, neonate N00.CNhs11124.650-25G412.92
skin, neonate N03.CNhs11215.662-22H314.96
skin, neonate N06.CNhs11097.693-20I516.12
skin, neonate N10.CNhs11108.762-6C414.28
small intestine, neonate N16.CNhs11114.790-21I111.37
spinal cord, adult.CNhs10505.24-13C98.71
spleen, adult.CNhs10465.25-2G222.21
spleen, embryo E16.CNhs11035.461-43C110.94
spleen, embryo E18.CNhs11011.1271-21F211.85
spleen, neonate N10.CNhs11116.752-24D117.71
spleen, neonate N20.CNhs11112.824-19H122.01
spleen, neonate N25.CNhs11099.1354-25G320.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.56
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E39.65
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D47.88
stomach, embryo E17.CNhs11006.1035-18D59.62
stomach, embryo E18.CNhs10999.1286-20C67.64
stomach, neonate N03.CNhs11193.1340-24B812.14
stomach, neonate N07.CNhs11210.718-18A913.72
stomach, neonate N25.CNhs11104.1355-25E412.83
stomach, neonate N30.CNhs11134.1386-42I114.00
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F514.35
testis, embryo E15.CNhs11034.443-27C58.27
testis, embryo E16.CNhs11033.470-26G512.44
testis, embryo E17.CNhs11029.486-18I510.20
testis, embryo E18.CNhs11027.503-18G514.19
testis, neonate N00.CNhs11189.1300-22B713.38
testis, neonate N07.CNhs11222.726-26I420.70
testis, neonate N10.CNhs11204.763-44D915.73
testis, neonate N20.CNhs11110.839-18H38.70
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B527.18
thymus, embryo E14.CNhs11041.402-44I48.11
thymus, embryo E15.CNhs11005.430-45I27.81
thymus, embryo E16.CNhs11002.456-26C510.65
thymus, embryo E17.CNhs10581.478-18C118.08
thymus, embryo E18.CNhs10595.1273-19G421.06
thymus, neonate N02.CNhs11181.1541-43F823.20
thymus, neonate N03.CNhs11137.2104-43C721.86
thymus, neonate N06.CNhs11197.681-26C425.34
thymus, neonate N07.CNhs11211.713-19D324.92
thymus, neonate N10.CNhs11194.748-24E426.52
thymus, neonate N20.CNhs11186.820-7A232.26
thymus, neonate N25.CNhs11125.1362-25G731.17
thymus, neonate N30.CNhs11132.1393-42G231.32
tongue, adult.CNhs10499.32-1B414.28
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H327.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F730.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G518.30
urinary bladder, adult.CNhs10481.879-12E412.36
uterus, adult pregnant day19.CNhs10497.590-15F517.83
uterus, adult.CNhs10509.92-27E518.50
vagina, adult.CNhs10502.89-27D58.57
vesicular gland, adult.CNhs10491.51-27F815.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I88.82
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H26.83
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B17.97
whole body, embryo E16.CNhs10514.453-14F28.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.63
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.14
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.90
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.15
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.76
whole body, embryo E17.5.CNhs10513.490-9F912.15
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B310.53
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D114.34
whole body, neonate N10.CNhs10518.761-6B410.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:28980663..28980698,%2B&oldid=918712"