Personal tools

FFCP PHASE1:Mm9::chr5:33446869..33446889,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:33446869..33446889,+
|short_description=p1@Slc5a1
|description=CAGE_peak_1_at_Slc5a1_5end
|association_with_transcript=1bp_to_ENSMUST00000011178,NM_019810,uc008xah.2_5end
|EntrezGene=20537
|EntrezGene=20537
|HGNC=
|HGNC=
|UniProt=Q9QXI6,Q8C3K6,Q8CCA7
|UniProt=Q9QXI6,Q8C3K6,Q8CCA7
|association_with_transcript=1bp_to_ENSMUST00000011178,NM_019810,uc008xah.2_5end
|description=CAGE_peak_1_at_Slc5a1_5end
|id=chr5:33446869..33446889,+
|ontology_enrichment_disease=
|phase1_expression=0.160148847104794,1326.45552443721,1489.21251052195,2620.85239097368,3318.9351066245,74.3705174569672,78.9610725212877,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,263.827505186328,349.849153627434,1103.67383502907,1044.1670786896,517.130958446134,911.732366551682,1084.48564835698,303.105608065802,0,0,0,49.9713302169705,70.4834896320008,68.600903704156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.7404863730416,0.860423876981386,0,0,0,0,59.1271008754675,0,0,0,0.281686839553361,0,0,0,0,0,0,346.776442706785,0,0,0,0,0,0,0,1.38233250462643,0.494389935468748,0,0,0,0,0,59.6453635897991,0,0,1166.67237113764,0,0,0,0.149790639404823,0,0,0,0,0,0,0.203678727700633,0,0,12.8369532090749,0,0,0,0,0,0.12811372028485,0.187403449119458,7.24369438069244,0,0,0,0,2.50242524303038,4.179025998266,4.7329891373827,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,2057.18734285713,711.636474891598,0,0,0.644337306610467,3.63030344322017,7.11609740303585,20.9248188723815,1044.43846445947,70.4911526218767,48.0050248808515,39.9902508802713,34.8985715943225,929.379268548465,533.860983190495,844.558139871771,0,0.913988100877831,2.25415471346161,2.8511185898344,4.46090720485539,2.94570443539338,8.85311519739602,20.6654207171443,25.7477913659855,28.7515391937795,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,2.18426371180192,0.505157755894224,0.717589654087649,0.482443521363367,2.21703828199926,0,0.162964976442026,0.169745085775188,0,0.670025029767263,0.476087281772027,1.17080188714679,1.41871629695572,1.32878813789265,2.55127629851979,2.78567635016755,1.72684981865896,2.4590339958857,0,0,59.9952413083224,35.5958402733105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,2.8044920905331,10.619611067197,0,0,0.188605079755898,0,0.307435147943927,19.6405502807848,0.727067458955011,1.42598951353889,5.05658812697306,4.21674434299995,3.09406629744561,0,0,0,0,0,0,0,0,0,0.42366414172764,41.6798672323878,7.74965388824956,4.03661066739764,4.82503399425247,4.65552141612232,5.0883678920969,621.437143694842,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,3.81868247206045,0,0.609958401380546,3.02414954301044,6.89991376847747,9.38959024108564,8.90104686139817,8.10003866108292,8.37619014348895,13.0911123024711,16.1548221402601,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0,0.147689527174577,0.403865799792591,0.0762068066549998,0.302478555410522,0.194915761479505,0.192423683280659,0.233753804363138,31.5155233225144,0,0,0,1.73870634628971,3.37828455812128,15.7510396869848,49.3047271881851,32.6021867622986,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70174701947806,0.209613162627982,0.183843508450014,0.222246727801615,0.824140228955577,1.60459604795908,0.758091635291392,0.25347929989024,1.50901073108861,1.31098110457835,1.72867911493147,0.976402972245426,0.476293691283074,0.811190281613988,1.15745532278223,2.06042950401653,1.17759136107518,1.71434626192708,1.24233064311536,1.1921809497366,1.74415699958794,1.59985946706062,2.19997980518359,1.28049581010941,2.10455769150274,0.679020569229309,1.68342681497322,0.830445126869219,0.985044823755635,1.63692417267876,1.39443157067369,3.08650577569826,1.24905288968973,3.27504251823572,3.43793686477277,0.956441660344217,1.32354851471709,0
|phase1_expression=0.160148847104794,1326.45552443721,1489.21251052195,2620.85239097368,3318.9351066245,74.3705174569672,78.9610725212877,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,263.827505186328,349.849153627434,1103.67383502907,1044.1670786896,517.130958446134,911.732366551682,1084.48564835698,303.105608065802,0,0,0,49.9713302169705,70.4834896320008,68.600903704156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.7404863730416,0.860423876981386,0,0,0,0,59.1271008754675,0,0,0,0.281686839553361,0,0,0,0,0,0,346.776442706785,0,0,0,0,0,0,0,1.38233250462643,0.494389935468748,0,0,0,0,0,59.6453635897991,0,0,1166.67237113764,0,0,0,0.149790639404823,0,0,0,0,0,0,0.203678727700633,0,0,12.8369532090749,0,0,0,0,0,0.12811372028485,0.187403449119458,7.24369438069244,0,0,0,0,2.50242524303038,4.179025998266,4.7329891373827,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,2057.18734285713,711.636474891598,0,0,0.644337306610467,3.63030344322017,7.11609740303585,20.9248188723815,1044.43846445947,70.4911526218767,48.0050248808515,39.9902508802713,34.8985715943225,929.379268548465,533.860983190495,844.558139871771,0,0.913988100877831,2.25415471346161,2.8511185898344,4.46090720485539,2.94570443539338,8.85311519739602,20.6654207171443,25.7477913659855,28.7515391937795,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,2.18426371180192,0.505157755894224,0.717589654087649,0.482443521363367,2.21703828199926,0,0.162964976442026,0.169745085775188,0,0.670025029767263,0.476087281772027,1.17080188714679,1.41871629695572,1.32878813789265,2.55127629851979,2.78567635016755,1.72684981865896,2.4590339958857,0,0,59.9952413083224,35.5958402733105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,2.8044920905331,10.619611067197,0,0,0.188605079755898,0,0.307435147943927,19.6405502807848,0.727067458955011,1.42598951353889,5.05658812697306,4.21674434299995,3.09406629744561,0,0,0,0,0,0,0,0,0,0.42366414172764,41.6798672323878,7.74965388824956,4.03661066739764,4.82503399425247,4.65552141612232,5.0883678920969,621.437143694842,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,3.81868247206045,0,0.609958401380546,3.02414954301044,6.89991376847747,9.38959024108564,8.90104686139817,8.10003866108292,8.37619014348895,13.0911123024711,16.1548221402601,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0,0.147689527174577,0.403865799792591,0.0762068066549998,0.302478555410522,0.194915761479505,0.192423683280659,0.233753804363138,31.5155233225144,0,0,0,1.73870634628971,3.37828455812128,15.7510396869848,49.3047271881851,32.6021867622986,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70174701947806,0.209613162627982,0.183843508450014,0.222246727801615,0.824140228955577,1.60459604795908,0.758091635291392,0.25347929989024,1.50901073108861,1.31098110457835,1.72867911493147,0.976402972245426,0.476293691283074,0.811190281613988,1.15745532278223,2.06042950401653,1.17759136107518,1.71434626192708,1.24233064311536,1.1921809497366,1.74415699958794,1.59985946706062,2.19997980518359,1.28049581010941,2.10455769150274,0.679020569229309,1.68342681497322,0.830445126869219,0.985044823755635,1.63692417267876,1.39443157067369,3.08650577569826,1.24905288968973,3.27504251823572,3.43793686477277,0.956441660344217,1.32354851471709,0
|short_description=p1@Slc5a1
}}
}}

Revision as of 18:05, 18 April 2012

Short description:p1@Slc5a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc5a1_5end
Coexpression cluster:NA
Association with transcript: 1bp_to_ENSMUST00000011178, NM_019810, uc008xah.2_5end
EntrezGene:Slc5a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
500
1000
1500
2000
2500
3000
3500




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:33446869..33446889,%2B&oldid=927467"