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FFCP PHASE1:Mm9::chr3:121670740..121670756,+: Difference between revisions

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|description=CAGE_peak_1_at_Arhgap29_5end
|description=CAGE_peak_1_at_Arhgap29_5end
|id=chr3:121670740..121670756,+
|id=chr3:121670740..121670756,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=20.178754735204,2.44282785347553,2.72999543633722,1.51232105653415,0.500895729946347,4.8684988854448,4.90586545250604,2.84071311571468,22.9485617107217,37.450324211519,2.05461561870606,4.22792442675283,19.3456824822262,17.8337620934755,2.6648780945253,1.82227740650843,0.699561878128147,1.10411757875383,1.50825876966313,0.42438965179803,20.2403030559546,0.297872853602656,0.522399578277871,3.03985603307473,3.21172993494038,3.44539178469012,2.15380998079537,3.878482188346,3.6104449696711,6.04872311423834,5.09980174507201,0,0,0,3.46621943701529,4.48833542467929,5.3084032628216,0,1.5626706890476,0,0,0,0,73.271948061786,78.1616139702457,67.7287515476605,10.9534788208725,8.72100625521786,6.37089929929968,12.8323733389027,8.67915814077248,1.43752564364972,0.167782606057736,7.97898356212479,2.35265659399725,19.294457702696,17.4785398362642,18.0485232297105,1.82084814773638,0.528990979272033,7.60597684207415,9.4876468979357,8.00365316500025,0.899899717281399,0,2.1314403448383,4.19440154725767,6.53171119046643,7.36196247390191,3.24014251996058,5.04779907243317,6.56997264128748,5.30084498283872,3.30725157880376,1.43768206527355,2.75765635983006,9.91042928994498,7.91661496128164,6.60508093001847,1.31886287730194,2.10421580285542,6.25096044668112,4.74611098302348,8.4414391504752,14.515833538797,14.7314292736834,16.2303716110977,13.047961207771,5.2251073399897,6.2724394888632,87.8289400766084,46.4628893569949,6.11974200336975,29.6836755400799,51.9821133958135,60.035602871043,25.5608844639788,14.9978683868691,7.79358013808606,4.59341446863442,4.50698943285378,21.815501160434,7.64415719119937,21.3320010945999,8.87613268145978,13.9347926011304,8.08839112023653,20.2105467102736,42.206875034489,20.336573051881,20.471268558404,21.617048960162,18.9104707749968,18.6896074285252,23.7529188414124,24.2536521266274,21.0115722574218,88.4948064349859,7.07688441559899,34.9416395886404,17.2256384399107,10.1823803158397,13.0474232852686,9.36898550436951,10.4723353406728,10.4737392635522,0.958520996047362,0,0.508280908292259,11.6836698735762,8.23501085073528,6.28271760564322,12.6891753740362,16.6215047264715,9.14267396062064,10.5456820994042,58.6594735777822,14.1823946495506,6.57079171927554,15.993581047372,21.8602344177342,14.9436367881757,19.086585759367,20.4958552256572,11.3620953582718,14.3487366719032,11.9001190190856,19.6614561761652,27.1615671095381,44.8181409997732,38.5332961919048,37.9208617099704,35.8680951501021,39.700746983527,35.8060917349822,64.2880681823733,0,0.51469581422943,0,63.5876121683991,48.0778422961247,49.8771910247011,49.7163944728942,53.126342571799,50.9081472528348,48.5995944528352,49.3623058575299,38.0655016116973,46.7349973754284,58.7719521403161,56.2617538248239,59.9419948443863,67.6214355096436,46.1670080535679,10.7247873767705,10.496270462687,2.31293148088659,6.87571473325215,28.7939138222566,35.2999741227867,35.1808169409315,32.8744145136048,27.5748774367639,20.9248188723815,12.8122846617018,17.6227881554692,17.5934646160189,15.1206918751275,22.2259059315797,16.178749355776,13.1844210423563,9.55878111620963,13.2767530667157,27.5338915389446,32.6852433451933,32.380561127405,33.3598277928316,30.4389458323983,50.6524662365301,44.8734849857991,45.0586348904746,49.1120712408766,59.2905254174298,11.8460025058427,12.579775687245,8.09503604585473,11.5630269191447,16.1588697034119,19.0969388836065,27.6188291952778,10.8630601939274,31.8491239298175,54.6319184803947,48.0061822492369,51.7982537370171,43.4435670069032,62.0715050785816,59.3405531276942,92.1918418931357,27.4762547067203,44.8153685215571,35.1372327554639,35.2035372432753,38.8614517265013,55.2261246855552,45.6612735987249,75.3495988827593,71.5330947565543,85.1488464630981,78.9821176929857,67.1744579458334,69.286899060544,0,1.63171705145613,19.1788066477424,17.6599517635029,13.6468001489623,12.1900154055891,90.6560247933015,26.5094473564592,7.57219726599016,7.02789739733949,5.60100834105277,1.91175038362042,2.89638276307112,1.13230612315533,3.23848561339915,5.55286130031493,4.74345333535828,13.8168166061377,80.7639084835048,53.5977467038438,74.928001302645,64.1733778363163,21.2392221343941,23.3069410708782,18.1394134178851,22.4440044909519,10.6308681437078,42.426050416262,41.6069552000836,29.0826983582004,42.7796854061666,24.3348303610578,13.7044191147498,17.5330423521918,28.937366489072,31.1505692674167,15.781759421496,31.2932071146125,42.3843158405034,36.5656076084245,31.0997648938009,11.2652031172402,34.4967410853654,53.1698497868189,5.51320995137405,33.307023094179,41.9807509409354,52.0500542129985,48.7039163532797,49.5705517230085,14.5740418314925,10.0129663085675,9.3978984438819,52.2158775946953,31.483069652851,7.34636982318295,7.92826520781946,11.6676868335327,9.5187920796559,7.69732987780119,7.04819866402561,10.5013767981662,21.9853515538889,41.2738518267503,28.2973992953119,30.9450678101414,29.478946105734,33.0417648642811,35.2930255947184,31.6724689800676,12.1838074894285,12.4267862617385,5.07323644815771,29.1557264785759,22.8332716830795,23.9174961663179,21.1822110503479,24.1607259451813,25.1144490701913,20.7024971901881,19.3989787187565,5.07326653734613,7.4887801627045,4.4241556887945,7.50083296573608,8.52500944468066,5.06691209613401,8.95133478337407,8.54329825559439,3.846254384639,3.69223817936443,5.04832249740738,3.12447907285499,3.2264379243789,2.72882066071307,1.82802499116626,2.22066114144981,22.2195775942907,10.8773117153292,3.3194126945506,12.4234616109418,45.3995545975648,53.4895055035869,57.8759132684558,23.1517849405391,9.5298699766719,6.7770221114048,7.82552902062201,8.59343270159095,6.70227411140382,10.9613203163303,8.3093328712867,7.42524750254986,6.30449684513909,4.98456649882625,7.7664046762773,25.84304954846,22.3453929104577,26.9759097091532,36.9522209943807,34.1669455083611,28.8634308266522,41.3378913711004,34.6138896161342,40.1149011989769,33.3560319528213,35.7405812845238,41.3091687635507,31.4635465098805,37.1986135472291,35.3228134077022,37.6272016113628,38.8212491915266,39.5463901950595,44.9173631875604,35.7693375926586,34.9726637433124,31.5906934963621,32.665758022783,37.9354147410377,33.6911581886884,35.7919791381792,37.5002344389184,34.4621321983574,38.296760104533,43.7690971893036,36.8954906366182,34.5750733138228,40.1046422306296,42.2977576437687,32.0224974228695,22.2331414364772,37.4290573512653,32.0157870531964,30.0322681348084,33.5298957061664,45.9098314528434
|phase1_expression=20.178754735204,2.44282785347553,2.72999543633722,1.51232105653415,0.500895729946347,4.8684988854448,4.90586545250604,2.84071311571468,22.9485617107217,37.450324211519,2.05461561870606,4.22792442675283,19.3456824822262,17.8337620934755,2.6648780945253,1.82227740650843,0.699561878128147,1.10411757875383,1.50825876966313,0.42438965179803,20.2403030559546,0.297872853602656,0.522399578277871,3.03985603307473,3.21172993494038,3.44539178469012,2.15380998079537,3.878482188346,3.6104449696711,6.04872311423834,5.09980174507201,0,0,0,3.46621943701529,4.48833542467929,5.3084032628216,0,1.5626706890476,0,0,0,0,73.271948061786,78.1616139702457,67.7287515476605,10.9534788208725,8.72100625521786,6.37089929929968,12.8323733389027,8.67915814077248,1.43752564364972,0.167782606057736,7.97898356212479,2.35265659399725,19.294457702696,17.4785398362642,18.0485232297105,1.82084814773638,0.528990979272033,7.60597684207415,9.4876468979357,8.00365316500025,0.899899717281399,0,2.1314403448383,4.19440154725767,6.53171119046643,7.36196247390191,3.24014251996058,5.04779907243317,6.56997264128748,5.30084498283872,3.30725157880376,1.43768206527355,2.75765635983006,9.91042928994498,7.91661496128164,6.60508093001847,1.31886287730194,2.10421580285542,6.25096044668112,4.74611098302348,8.4414391504752,14.515833538797,14.7314292736834,16.2303716110977,13.047961207771,5.2251073399897,6.2724394888632,87.8289400766084,46.4628893569949,6.11974200336975,29.6836755400799,51.9821133958135,60.035602871043,25.5608844639788,14.9978683868691,7.79358013808606,4.59341446863442,4.50698943285378,21.815501160434,7.64415719119937,21.3320010945999,8.87613268145978,13.9347926011304,8.08839112023653,20.2105467102736,42.206875034489,20.336573051881,20.471268558404,21.617048960162,18.9104707749968,18.6896074285252,23.7529188414124,24.2536521266274,21.0115722574218,88.4948064349859,7.07688441559899,34.9416395886404,17.2256384399107,10.1823803158397,13.0474232852686,9.36898550436951,10.4723353406728,10.4737392635522,0.958520996047362,0,0.508280908292259,11.6836698735762,8.23501085073528,6.28271760564322,12.6891753740362,16.6215047264715,9.14267396062064,10.5456820994042,58.6594735777822,14.1823946495506,6.57079171927554,15.993581047372,21.8602344177342,14.9436367881757,19.086585759367,20.4958552256572,11.3620953582718,14.3487366719032,11.9001190190856,19.6614561761652,27.1615671095381,44.8181409997732,38.5332961919048,37.9208617099704,35.8680951501021,39.700746983527,35.8060917349822,64.2880681823733,0,0.51469581422943,0,63.5876121683991,48.0778422961247,49.8771910247011,49.7163944728942,53.126342571799,50.9081472528348,48.5995944528352,49.3623058575299,38.0655016116973,46.7349973754284,58.7719521403161,56.2617538248239,59.9419948443863,67.6214355096436,46.1670080535679,10.7247873767705,10.496270462687,2.31293148088659,6.87571473325215,28.7939138222566,35.2999741227867,35.1808169409315,32.8744145136048,27.5748774367639,20.9248188723815,12.8122846617018,17.6227881554692,17.5934646160189,15.1206918751275,22.2259059315797,16.178749355776,13.1844210423563,9.55878111620963,13.2767530667157,27.5338915389446,32.6852433451933,32.380561127405,33.3598277928316,30.4389458323983,50.6524662365301,44.8734849857991,45.0586348904746,49.1120712408766,59.2905254174298,11.8460025058427,12.579775687245,8.09503604585473,11.5630269191447,16.1588697034119,19.0969388836065,27.6188291952778,10.8630601939274,31.8491239298175,54.6319184803947,48.0061822492369,51.7982537370171,43.4435670069032,62.0715050785816,59.3405531276942,92.1918418931357,27.4762547067203,44.8153685215571,35.1372327554639,35.2035372432753,38.8614517265013,55.2261246855552,45.6612735987249,75.3495988827593,71.5330947565543,85.1488464630981,78.9821176929857,67.1744579458334,69.286899060544,0,1.63171705145613,19.1788066477424,17.6599517635029,13.6468001489623,12.1900154055891,90.6560247933015,26.5094473564592,7.57219726599016,7.02789739733949,5.60100834105277,1.91175038362042,2.89638276307112,1.13230612315533,3.23848561339915,5.55286130031493,4.74345333535828,13.8168166061377,80.7639084835048,53.5977467038438,74.928001302645,64.1733778363163,21.2392221343941,23.3069410708782,18.1394134178851,22.4440044909519,10.6308681437078,42.426050416262,41.6069552000836,29.0826983582004,42.7796854061666,24.3348303610578,13.7044191147498,17.5330423521918,28.937366489072,31.1505692674167,15.781759421496,31.2932071146125,42.3843158405034,36.5656076084245,31.0997648938009,11.2652031172402,34.4967410853654,53.1698497868189,5.51320995137405,33.307023094179,41.9807509409354,52.0500542129985,48.7039163532797,49.5705517230085,14.5740418314925,10.0129663085675,9.3978984438819,52.2158775946953,31.483069652851,7.34636982318295,7.92826520781946,11.6676868335327,9.5187920796559,7.69732987780119,7.04819866402561,10.5013767981662,21.9853515538889,41.2738518267503,28.2973992953119,30.9450678101414,29.478946105734,33.0417648642811,35.2930255947184,31.6724689800676,12.1838074894285,12.4267862617385,5.07323644815771,29.1557264785759,22.8332716830795,23.9174961663179,21.1822110503479,24.1607259451813,25.1144490701913,20.7024971901881,19.3989787187565,5.07326653734613,7.4887801627045,4.4241556887945,7.50083296573608,8.52500944468066,5.06691209613401,8.95133478337407,8.54329825559439,3.846254384639,3.69223817936443,5.04832249740738,3.12447907285499,3.2264379243789,2.72882066071307,1.82802499116626,2.22066114144981,22.2195775942907,10.8773117153292,3.3194126945506,12.4234616109418,45.3995545975648,53.4895055035869,57.8759132684558,23.1517849405391,9.5298699766719,6.7770221114048,7.82552902062201,8.59343270159095,6.70227411140382,10.9613203163303,8.3093328712867,7.42524750254986,6.30449684513909,4.98456649882625,7.7664046762773,25.84304954846,22.3453929104577,26.9759097091532,36.9522209943807,34.1669455083611,28.8634308266522,41.3378913711004,34.6138896161342,40.1149011989769,33.3560319528213,35.7405812845238,41.3091687635507,31.4635465098805,37.1986135472291,35.3228134077022,37.6272016113628,38.8212491915266,39.5463901950595,44.9173631875604,35.7693375926586,34.9726637433124,31.5906934963621,32.665758022783,37.9354147410377,33.6911581886884,35.7919791381792,37.5002344389184,34.4621321983574,38.296760104533,43.7690971893036,36.8954906366182,34.5750733138228,40.1046422306296,42.2977576437687,32.0224974228695,22.2331414364772,37.4290573512653,32.0157870531964,30.0322681348084,33.5298957061664,45.9098314528434
|short_description=p1@Arhgap29
|short_description=p1@Arhgap29
}}
}}

Revision as of 18:28, 18 April 2012

Short description:p1@Arhgap29
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arhgap29_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000137089, uc008rei.1_5end
EntrezGene:Arhgap29
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Arhgap29

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E722.95
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F237.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.35
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.83
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I23.88
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D873.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D978.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B367.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.72
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C119.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.48
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.05
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.36
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.05
Mouse Schwann, donor1.CNhs12507.11728-123D95.23
Mouse Schwann, donor2.CNhs12573.11746-123F96.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G387.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F746.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C829.68
Mouse hepatocyte, donor6.CNhs13090.11822-124F451.98
Mouse hepatocyte, donor8.CNhs13091.11824-124F660.04
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I715.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.21
accessory axillary lymph node, adult.CNhs10475.1063-29H942.21
adrenal gland, adult.CNhs10508.49-24D720.34
adrenal gland, embryo E14.CNhs11038.406-44C520.47
adrenal gland, embryo E16.CNhs11004.1254-43D621.62
adrenal gland, embryo E17.CNhs11043.1263-45I118.91
adrenal gland, embryo E18.CNhs11026.1262-18F518.69
adrenal gland, neonate N00.CNhs11191.1311-23C123.75
adrenal gland, neonate N25.CNhs11223.1377-27I324.25
amnion, adult pregnant day17.5.CNhs10488.583-22A821.01
aorta, adult.CNhs10498.46-23H188.49
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F534.94
bone (os femoris), neonate N16.CNhs11225.1525-43A617.23
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B29.37
cerebellum, neonate N30.CNhs11135.1395-42I210.47
colon, adult.CNhs10468.36-18H710.47
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A411.68
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F16.28
cortex, adult.CNhs10473.12-14D512.69
cortex, neonate N30.CNhs11107.1392-42F216.62
diencephalon, adult.CNhs10482.20-12F29.14
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B158.66
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.18
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G415.99
eyeball, embryo E12.CNhs11016.345-16C621.86
eyeball, embryo E14.CNhs10521.399-16E214.94
eyeball, embryo E15.CNhs10593.426-16C919.09
eyeball, embryo E17.CNhs11023.1261-18D420.50
eyeball, neonate N00.CNhs11207.633-15C611.36
eyeball, neonate N01.CNhs11140.1532-43E714.35
eyeball, neonate N02.CNhs11205.1551-44G811.90
eyeball, neonate N16.CNhs11188.777-19A219.66
forelimb, embryo E11.CNhs10596.335-25E227.16
forelimb, embryo E12.CNhs10600.359-14H244.82
forelimb, embryo E13.CNhs10589.384-1E238.53
forelimb, embryo E14.CNhs10577.413-26A837.92
forelimb, embryo E15.CNhs11007.437-20E735.87
forelimb, embryo E17.CNhs10598.1517-43C439.70
forelimb, embryo E18.CNhs11008.1520-43B535.81
gonad, embryo E13.CNhs11044.1564-45I664.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E963.59
heart, embryo E12.CNhs11015.353-12F548.08
heart, embryo E13.CNhs11013.376-3I949.88
heart, embryo E14.CNhs10597.403-26D449.72
heart, embryo E15.CNhs11017.431-16C853.13
heart, embryo E16.CNhs11021.457-17C650.91
heart, embryo E17.CNhs11025.479-18E548.60
heart, embryo E18.CNhs11030.1283-20G349.36
heart, neonate N00.CNhs11213.639-21E338.07
heart, neonate N03.CNhs11221.1349-25I246.73
heart, neonate N10.CNhs11118.749-24G158.77
heart, neonate N16.CNhs11209.782-15G156.26
heart, neonate N20.CNhs11127.821-26I659.94
heart, neonate N25.CNhs11196.1351-25D367.62
heart, neonate N30.CNhs11202.1390-42D246.17
hippocampus, adult.CNhs10478.13-16E810.72
hippocampus, neonate N00.CNhs11228.627-43G110.50
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I528.79
intestine, embryo E13.CNhs11010.381-16D535.30
intestine, embryo E15.CNhs10602.976-16D835.18
intestine, embryo E16.CNhs10585.463-22H432.87
intestine, embryo E17.CNhs10582.482-18D327.57
intestine, embryo E18.CNhs10526.1289-20F720.92
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E917.62
intestine, neonate N06.CNhs11102.688-20B817.59
intestine, neonate N07.CNhs11095.720-20F215.12
intestine, neonate N10.CNhs11098.755-23A522.23
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E313.18
intestine, neonate N30.CNhs11131.1384-42G19.56
kidney, embryo E14.CNhs10606.411-4I913.28
kidney, embryo E15.CNhs10997.434-16F827.53
kidney, embryo E16.CNhs10584.464-22A532.69
kidney, embryo E17.CNhs11028.483-18I232.38
kidney, embryo E18.CNhs11001.1288-20C733.36
kidney, neonate N00.CNhs11214.646-21G730.44
kidney, neonate N10.CNhs11206.758-6D550.65
kidney, neonate N20.CNhs11113.832-19I144.87
kidney, neonate N25.CNhs11122.1353-25F345.06
kidney, neonate N30.CNhs11203.1385-42H149.11
liver, adult pregnant day01.CNhs10466.508-5B259.29
liver, embryo E12.CNhs10601.355-15F811.85
liver, embryo E13.CNhs10524.378-3H612.58
liver, embryo E14.CNhs10594.409-16E18.10
liver, embryo E15.CNhs10520.433-16D711.56
liver, embryo E16.CNhs10523.462-17F516.16
liver, embryo E17.CNhs10510.481-18A319.10
liver, embryo E18.CNhs10579.499-43G427.62
liver, neonate N00.CNhs11117.641-24F410.86
liver, neonate N03.CNhs11123.1345-25G231.85
liver, neonate N06.CNhs11101.684-20A854.63
liver, neonate N07.CNhs11103.716-20H248.01
liver, neonate N10.CNhs11115.751-24B951.80
liver, neonate N20.CNhs11220.823-25A343.44
liver, neonate N25.CNhs11198.1368-26H162.07
liver, neonate N30.CNhs11106.1382-42D159.34
lung, adult.CNhs10474.28-22B192.19
lung, embryo E12.CNhs10522.354-16G227.48
lung, embryo E14.CNhs10604.404-26F844.82
lung, embryo E15.CNhs11020.432-17C535.14
lung, embryo E16.CNhs10998.458-17B635.20
lung, embryo E17.CNhs10605.480-44A638.86
lung, embryo E18.CNhs10583.1287-20I655.23
lung, neonate N00.CNhs11224.640-42C645.66
lung, neonate N06.CNhs11212.683-20E575.35
lung, neonate N07.CNhs11111.715-19A371.53
lung, neonate N10.CNhs11219.750-23E685.15
lung, neonate N20.CNhs11109.822-18A478.98
lung, neonate N25.CNhs11119.1359-25C767.17
lung, neonate N30.CNhs11133.1394-42H269.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B619.18
mammary gland, adult pregnant day19.CNhs10476.588-5H217.66
medulla oblongata, adult.CNhs10477.17-12C213.65
medulla oblongata, neonate N30.CNhs11200.1396-42A312.19
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C790.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C226.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I913.82
ovary, adult.CNhs10507.91-2I780.76
ovary, embryo E18.CNhs11040.505-44H753.60
ovary, neonate N00.CNhs11217.1299-22I474.93
oviduct, adult pregnant day01.CNhs10500.988-6G664.17
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F423.31
pancreas, embryo E15.CNhs11042.1556-45F218.14
pancreas, embryo E16.CNhs11003.460-26E522.44
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I742.43
pancreas, neonate N00.CNhs11105.645-26G941.61
pancreas, neonate N01.CNhs11138.1531-43D729.08
pancreas, neonate N02.CNhs11139.1539-43D842.78
pancreas, neonate N16.CNhs11136.787-43B624.33
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H517.53
pituitary gland, adult.CNhs10493.21-1G828.94
pituitary gland, embryo E12.CNhs11018.346-16E631.15
pituitary gland, embryo E13.CNhs11009.370-44C715.78
pituitary gland, embryo E14.CNhs11037.398-44A531.29
pituitary gland, embryo E15.CNhs10592.427-16B942.38
pituitary gland, embryo E16.CNhs11036.449-43F636.57
pituitary gland, embryo E17.CNhs11039.1265-44F531.10
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I734.50
placenta, adult pregnant day17.CNhs10464.577-18G353.17
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C333.31
skin, neonate N00.CNhs11124.650-25G441.98
skin, neonate N03.CNhs11215.662-22H352.05
skin, neonate N06.CNhs11097.693-20I548.70
skin, neonate N10.CNhs11108.762-6C449.57
small intestine, neonate N16.CNhs11114.790-21I114.57
spinal cord, adult.CNhs10505.24-13C910.01
spleen, adult.CNhs10465.25-2G29.40
spleen, embryo E16.CNhs11035.461-43C152.22
spleen, embryo E18.CNhs11011.1271-21F231.48
spleen, neonate N10.CNhs11116.752-24D17.35
spleen, neonate N20.CNhs11112.824-19H17.93
spleen, neonate N25.CNhs11099.1354-25G311.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.05
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E321.99
stomach, embryo E15.CNhs10603.1252-16G841.27
stomach, embryo E16.CNhs11022.459-17D428.30
stomach, embryo E17.CNhs11006.1035-18D530.95
stomach, embryo E18.CNhs10999.1286-20C629.48
stomach, neonate N03.CNhs11193.1340-24B833.04
stomach, neonate N07.CNhs11210.718-18A935.29
stomach, neonate N25.CNhs11104.1355-25E431.67
stomach, neonate N30.CNhs11134.1386-42I112.18
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F529.16
testis, embryo E15.CNhs11034.443-27C522.83
testis, embryo E16.CNhs11033.470-26G523.92
testis, embryo E17.CNhs11029.486-18I521.18
testis, embryo E18.CNhs11027.503-18G524.16
testis, neonate N00.CNhs11189.1300-22B725.11
testis, neonate N07.CNhs11222.726-26I420.70
testis, neonate N10.CNhs11204.763-44D919.40
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E27.49
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I47.50
thymus, embryo E15.CNhs11005.430-45I28.53
thymus, embryo E16.CNhs11002.456-26C55.07
thymus, embryo E17.CNhs10581.478-18C18.95
thymus, embryo E18.CNhs10595.1273-19G48.54
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C45.05
thymus, neonate N07.CNhs11211.713-19D33.12
thymus, neonate N10.CNhs11194.748-24E43.23
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G71.83
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B422.22
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.42
urinary bladder, adult.CNhs10481.879-12E445.40
uterus, adult pregnant day19.CNhs10497.590-15F553.49
uterus, adult.CNhs10509.92-27E557.88
vagina, adult.CNhs10502.89-27D523.15
vesicular gland, adult.CNhs10491.51-27F89.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I825.84
whole body, embryo E12.CNhs10587.857-27C922.35
whole body, embryo E13.CNhs10512.372-23H226.98
whole body, embryo E14.5.CNhs10578.420-27D236.95
whole body, embryo E14.CNhs10519.395-14B134.17
whole body, embryo E16.CNhs10514.453-14F228.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G541.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G534.61
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G540.11
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G533.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G535.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G541.31
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G537.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G535.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G537.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G538.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G539.55
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G544.92
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G535.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G534.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G531.59
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G532.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G537.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G533.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G535.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G537.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G534.46
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G538.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G543.77
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G536.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G534.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G540.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G542.30
whole body, embryo E17.5.CNhs10513.490-9F932.02
whole body, embryo E17.CNhs10517.475-3I522.23
whole body, embryo E18.CNhs10516.493-3B337.43
whole body, neonate N00.CNhs10525.657-19C232.02
whole body, neonate N01.CNhs10576.659-23C630.03
whole body, neonate N06.CNhs10515.692-21D133.53
whole body, neonate N10.CNhs10518.761-6B445.91





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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