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FFCP PHASE1:Mm9::chr13:21903606..21903623,+: Difference between revisions

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|ontology_enrichment_celltype=CL:0000063!3.51e-19!66;CL:0000988!8.31e-15!32;CL:0002032!8.31e-15!32;CL:0000037!8.31e-15!32;CL:0000566!8.31e-15!32;CL:0000837!8.31e-15!32;CL:0002031!4.63e-12!25;CL:0002320!2.61e-10!46;CL:0000134!2.61e-10!46;CL:0000049!8.34e-10!19;CL:0000144!3.84e-09!121;CL:0000012!3.84e-09!121;CL:0000219!8.82e-09!54;CL:0002076!4.16e-08!15;CL:0002371!4.35e-08!118;CL:0000763!5.71e-08!16;CL:0000548!5.83e-07!115;CL:0000004!5.83e-07!115;CL:0000255!5.83e-07!115;CL:0000738!8.87e-07!17;CL:0002087!8.87e-07!17;CL:0000838!9.43e-07!12
|ontology_enrichment_celltype=CL:0000063!3.51e-19!66;CL:0000988!8.31e-15!32;CL:0002032!8.31e-15!32;CL:0000037!8.31e-15!32;CL:0000566!8.31e-15!32;CL:0000837!8.31e-15!32;CL:0002031!4.63e-12!25;CL:0002320!2.61e-10!46;CL:0000134!2.61e-10!46;CL:0000049!8.34e-10!19;CL:0000144!3.84e-09!121;CL:0000012!3.84e-09!121;CL:0000219!8.82e-09!54;CL:0002076!4.16e-08!15;CL:0002371!4.35e-08!118;CL:0000763!5.71e-08!16;CL:0000548!5.83e-07!115;CL:0000004!5.83e-07!115;CL:0000255!5.83e-07!115;CL:0000738!8.87e-07!17;CL:0002087!8.87e-07!17;CL:0000838!9.43e-07!12
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0002384!2.61e-10!46;UBERON:0002193!1.58e-08!48;UBERON:0002390!3.51e-08!45;UBERON:0003061!3.51e-08!45
|phase1_expression=7.68714466103011,17.7977457896074,12.739978702907,81.9678012641509,89.6603356603961,21.6564260766338,128.720564968135,68.1771147771523,11.9670413828917,14.5120006319636,40.0650045647682,14.9173937321279,73.7875146003497,51.2283558175325,0.999329285446988,2301.94131495493,3509.00238069078,145.585789312827,128.613338722183,374.311672885863,0.17008658030214,41.4043266507692,610.94630679597,147.033036547141,142.004344980578,28.711598205751,27.9995297503399,23.270893130076,121.424965032623,31.2517360902314,46.7851377482693,2053.05416729499,11.6862309641068,3328.11530132421,28.5963103553762,80.1250990627933,41.2422099649986,105.469970945701,278.155382650473,212.550640053362,86.4700287405591,133.876915051855,128.174733200225,0,0,0,0,0.436050312760893,0,0,0,4.31257693094915,113.085476482914,43.5217285206807,59.1525086490737,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0.449949858640699,0.988866362566974,0,1.19840044207362,0.384218305321555,0.103689612308478,0.135005938331691,0.630974884054146,0,0,0.367472397644862,0.191690942036473,0.919218786610021,0,0,0,0.131886287730194,0.365950574409639,0,0,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,24.3838342532853,85.5470060408812,29.5661778475711,33.5565312022741,0,0,0,0,0,0.340860645156116,151.455240683472,186.91663491597,10.9857867425811,33.3648841277226,5.09610479413291,14.2213340630666,283.386772683679,234.611235429941,239.113062491993,0,0,0,0.346970653532272,0,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0,2.65383165584962,0.808834249737046,1.10420759230197,0.969750506270444,0,0.292780797011547,0,0.510914110417183,169.778031424889,325.147280198427,154.263255666701,0,0,0.125654352112864,0,0,0.20778804455956,0,0,0.995255764880744,0.505445516867349,0,0.260240885925407,0.459804208866946,0.720248519221397,0.30140963567143,0.408218994907967,0.512454881139399,0.655912071918102,0,0.646703978798527,0,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0,247.881255121572,406.60969324125,1.13665399758237,0.621377317606506,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0,0,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.902072229254653,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0.795825888164603,0.38992817423824,0.898819408654221,0,0,1.32767530667157,0.342745537829186,1.1270773567308,0,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,0.166845105716094,1.57247196090562,0.899448449539415,0.811440485554012,0.964708639009667,1.78238096246994,1.15078454980324,0.486405680325106,1.09824565275233,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,1.13694847062291,0.651859905768103,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,0,0,0,0,0,0.172684981865896,0,33.1740824666399,21.2123216689297,0,0,0.160550589987792,0,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0,0,0,0.608929898229199,0.704015124191131,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,2.22132145037209,0.412773735926445,1.66675074632741,2.0720530270516,1.23024804948923,2.51655990527175,64.591803397665,67.0367456630322,68.5471870069942,0,0.474503990371703,0,0.108005340821801,0.418176592028937,0,0.809186078308924,0.0826534557253359,0,0,0,0.56369293868419,0.299033092087958,0,0.194451188344048,0.129159823477731,0.506868376472335,0.117357238645754,0.781226309063701,0.943734099831398,0,0,0,0.608175645870493,0.718976700153791,0.51968329191118,1.07416017400489,0,1.32214994471966,0.590758108698309,1.41353029927407,0.457240839929999,1.10908803650525,1.26695244961678,0.481059208201647,0.350630706544707,0,228.201560068538,195.12763812561,193.06730881869,0.19318959403219,0,0,0.214368379079066,0,1.6942555278512,1.38097570952153,1.14579102687879,26.8090964456153,0,0,2.70009000092722,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0.972426868273176,0.419226325255965,0.183843508450014,9.55660929546946,10.0957178047058,7.06022261101994,10.6132828940795,9.88569269571935,11.1289541417785,16.4809053146993,11.8446531949008,14.4737381768145,4.28664322154766,5.56244764535306,8.48800570040302,7.00546031365621,1.91358596174717,13.7147700954166,10.4710725634009,9.29901140794552,12.4997918303803,7.71696919405711,15.3152440283934,6.76833499629258,0.789209134313529,10.4569167661314,1.12228454331548,4.74540072496697,11.1310065084387,1.63692417267876,11.1554525653896,0,0.749431733813838,0.467863216890817,0.214871054048298,0.191288332068843,0,0.927471342481686
|phase1_expression=7.68714466103011,17.7977457896074,12.739978702907,81.9678012641509,89.6603356603961,21.6564260766338,128.720564968135,68.1771147771523,11.9670413828917,14.5120006319636,40.0650045647682,14.9173937321279,73.7875146003497,51.2283558175325,0.999329285446988,2301.94131495493,3509.00238069078,145.585789312827,128.613338722183,374.311672885863,0.17008658030214,41.4043266507692,610.94630679597,147.033036547141,142.004344980578,28.711598205751,27.9995297503399,23.270893130076,121.424965032623,31.2517360902314,46.7851377482693,2053.05416729499,11.6862309641068,3328.11530132421,28.5963103553762,80.1250990627933,41.2422099649986,105.469970945701,278.155382650473,212.550640053362,86.4700287405591,133.876915051855,128.174733200225,0,0,0,0,0.436050312760893,0,0,0,4.31257693094915,113.085476482914,43.5217285206807,59.1525086490737,0.257259436035947,0,0,0.202316460859598,0,0.633831403506179,0,0,0.449949858640699,0.988866362566974,0,1.19840044207362,0.384218305321555,0.103689612308478,0.135005938331691,0.630974884054146,0,0,0.367472397644862,0.191690942036473,0.919218786610021,0,0,0,0.131886287730194,0.365950574409639,0,0,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,24.3838342532853,85.5470060408812,29.5661778475711,33.5565312022741,0,0,0,0,0,0.340860645156116,151.455240683472,186.91663491597,10.9857867425811,33.3648841277226,5.09610479413291,14.2213340630666,283.386772683679,234.611235429941,239.113062491993,0,0,0,0.346970653532272,0,0,0.301445281105245,0.352766121407114,0.125666591329675,0,0,2.65383165584962,0.808834249737046,1.10420759230197,0.969750506270444,0,0.292780797011547,0,0.510914110417183,169.778031424889,325.147280198427,154.263255666701,0,0,0.125654352112864,0,0,0.20778804455956,0,0,0.995255764880744,0.505445516867349,0,0.260240885925407,0.459804208866946,0.720248519221397,0.30140963567143,0.408218994907967,0.512454881139399,0.655912071918102,0,0.646703978798527,0,0.175951124163949,0.43839146485515,0,0.348252166522167,0.205782136407943,0,247.881255121572,406.60969324125,1.13665399758237,0.621377317606506,0,0.180062061461015,0.473489471170421,0.196764231747404,0,0,0.268273401399619,0.233530684734339,0.329119699826961,0.32833492815819,0,0,0,0.134206418760372,0.210289948564127,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.902072229254653,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0.795825888164603,0.38992817423824,0.898819408654221,0,0,1.32767530667157,0.342745537829186,1.1270773567308,0,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0,0,0.166845105716094,1.57247196090562,0.899448449539415,0.811440485554012,0.964708639009667,1.78238096246994,1.15078454980324,0.486405680325106,1.09824565275233,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,1.13694847062291,0.651859905768103,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,0,0,0,0,0,0.172684981865896,0,33.1740824666399,21.2123216689297,0,0,0.160550589987792,0,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0,0.445597348164788,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0.214337035031592,0,0,0,0.608929898229199,0.704015124191131,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,2.22132145037209,0.412773735926445,1.66675074632741,2.0720530270516,1.23024804948923,2.51655990527175,64.591803397665,67.0367456630322,68.5471870069942,0,0.474503990371703,0,0.108005340821801,0.418176592028937,0,0.809186078308924,0.0826534557253359,0,0,0,0.56369293868419,0.299033092087958,0,0.194451188344048,0.129159823477731,0.506868376472335,0.117357238645754,0.781226309063701,0.943734099831398,0,0,0,0.608175645870493,0.718976700153791,0.51968329191118,1.07416017400489,0,1.32214994471966,0.590758108698309,1.41353029927407,0.457240839929999,1.10908803650525,1.26695244961678,0.481059208201647,0.350630706544707,0,228.201560068538,195.12763812561,193.06730881869,0.19318959403219,0,0,0.214368379079066,0,1.6942555278512,1.38097570952153,1.14579102687879,26.8090964456153,0,0,2.70009000092722,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0.972426868273176,0.419226325255965,0.183843508450014,9.55660929546946,10.0957178047058,7.06022261101994,10.6132828940795,9.88569269571935,11.1289541417785,16.4809053146993,11.8446531949008,14.4737381768145,4.28664322154766,5.56244764535306,8.48800570040302,7.00546031365621,1.91358596174717,13.7147700954166,10.4710725634009,9.29901140794552,12.4997918303803,7.71696919405711,15.3152440283934,6.76833499629258,0.789209134313529,10.4569167661314,1.12228454331548,4.74540072496697,11.1310065084387,1.63692417267876,11.1554525653896,0,0.749431733813838,0.467863216890817,0.214871054048298,0.191288332068843,0,0.927471342481686
|short_description=p6@Hist1h4c,p6@Hist1h4d,p6@Hist1h4f,p6@Hist1h4h,p6@Hist1h4i,p6@Hist1h4j,p6@Hist1h4k,p6@Hist1h4m,p6@Hist1h4n,p7@Hist1h4a,p7@Hist1h4b,p7@Hist2h4,p7@Hist4h4
|short_description=p6@Hist1h4c,p6@Hist1h4d,p6@Hist1h4f,p6@Hist1h4h,p6@Hist1h4i,p6@Hist1h4j,p6@Hist1h4k,p6@Hist1h4m,p6@Hist1h4n,p7@Hist1h4a,p7@Hist1h4b,p7@Hist2h4,p7@Hist4h4
}}
}}

Revision as of 18:47, 18 April 2012

Short description:p6@Hist1h4c, p6@Hist1h4d, p6@Hist1h4f, p6@Hist1h4h, p6@Hist1h4i, p6@Hist1h4j, p6@Hist1h4k, p6@Hist1h4m, p6@Hist1h4n, p7@Hist1h4a, p7@Hist1h4b, p7@Hist2h4, p7@Hist4h4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Hist1h4c_5end, CAGE_peak_6_at_Hist1h4d_5end, CAGE_peak_6_at_Hist1h4f_5end, CAGE_peak_6_at_Hist1h4h_5end, CAGE_peak_6_at_Hist1h4i_5end, CAGE_peak_6_at_Hist1h4j_5end, CAGE_peak_6_at_Hist1h4k_5end, CAGE_peak_6_at_Hist1h4m_5end, CAGE_peak_6_at_Hist1h4n_5end, CAGE_peak_7_at_Hist1h4a_5end, CAGE_peak_7_at_Hist1h4b_5end, CAGE_peak_7_at_Hist2h4_5end, CAGE_peak_7_at_Hist4h4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000104941, NM_001195421, uc007prr.2_5end
EntrezGene:100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p6@Hist1h4cp6@Hist1h4dp6@Hist1h4fp6@Hist1h4hp6@Hist1h4ip6@Hist1h4jp6@Hist1h4kp6@Hist1h4mp6@Hist1h4np7@Hist1h4ap7@Hist1h4bp7@Hist2h4p7@Hist4h4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I517.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I381.97
CD326+ enterocyte, pool2.CNhs13197.11849-124I489.66
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.66
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8128.72
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E968.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E640.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F114.92
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E473.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E851.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32301.94
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53509.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2145.59
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4128.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6374.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H241.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9610.95
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1147.03
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2142.00
GP2+ M cell, pool1.CNhs13228.11845-124H928.71
GP2+ M cell, pool2.CNhs13231.11846-124I128.00
GP2+ M cell, pool3.CNhs13240.11847-124I223.27
Ileum epithelium, pool1.CNhs13199.10252-104B9121.42
Ileum epithelium, pool2.CNhs13232.10253-104C131.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C846.79
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32053.05
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E93328.12
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F528.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F680.13
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F741.24
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8105.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1278.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3212.55
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G986.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2133.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4128.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2113.09
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I943.52
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A159.15
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D924.38
Mouse Schwann, donor2.CNhs12573.11746-123F985.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F733.56
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3151.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8186.92
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H133.36
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1283.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2234.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3239.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7169.78
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1325.15
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4154.26
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8247.88
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2406.61
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A133.17
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.21
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C664.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C967.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D368.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3228.20
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7195.13
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5193.07
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.47
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.50
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.46
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.16
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.93





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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