Personal tools

FFCP PHASE1:Mm9::chr13:95055236..95055297,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=CL:0000117!9.14e-09!23;CL:0000337!9.14e-09!23
|ontology_enrichment_celltype=CL:0000117!9.14e-09!23;CL:0000337!9.14e-09!23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0001049!6.77e-16!52;UBERON:0005068!6.77e-16!52;UBERON:0006241!6.77e-16!52;UBERON:0007135!6.77e-16!52;UBERON:0000955!4.20e-15!50;UBERON:0006238!4.20e-15!50;UBERON:0000033!4.26e-15!63;UBERON:0004121!8.94e-15!102;UBERON:0000924!8.94e-15!102;UBERON:0006601!8.94e-15!102;UBERON:0002616!1.88e-14!49;UBERON:0001017!3.20e-14!73;UBERON:0005743!3.20e-14!73;UBERON:0000073!5.23e-14!75;UBERON:0001016!5.23e-14!75;UBERON:0002020!7.17e-14!34;UBERON:0003080!2.69e-12!40;UBERON:0002346!3.50e-12!71;UBERON:0003075!3.50e-12!71;UBERON:0007284!3.50e-12!71;UBERON:0002780!1.02e-11!39;UBERON:0001890!1.02e-11!39;UBERON:0006240!1.02e-11!39;UBERON:0002791!2.42e-11!29;UBERON:0003528!2.42e-11!29;UBERON:0001893!2.42e-11!29;UBERON:0003056!3.89e-11!49;UBERON:0004111!6.69e-11!122;UBERON:0007023!7.11e-09!51;UBERON:0000025!1.43e-08!114;UBERON:0002619!3.94e-08!17;UBERON:0002021!9.59e-08!10;UBERON:0000411!9.59e-08!10;UBERON:0001950!9.59e-08!10;UBERON:0000956!3.00e-07!21;UBERON:0001869!3.00e-07!21;UBERON:0000203!3.00e-07!21
|phase1_expression=16.9757777931082,2.79180326111489,7.73498706962211,6.0492842261366,5.50985302940982,6.88305014838748,11.9142446703718,1.16210991097419,0.422366166455,0.468129052643987,0.171217968225505,0.398860794976682,0.513602189793617,0.174840804837995,3.66420737997229,3.03712901084739,0.699561878128147,0.315462165358238,0.411343300817216,2.54633791078818,25.3429004650188,6.55320277925843,8.8807928307238,10.3995074815714,11.0116454912242,5.16808767703518,9.04600191934057,7.97243560937789,13.4916627814025,12.8535366177565,12.6386391073524,0,1.23012957516914,0,2.59966457776147,3.32469290716985,4.28755648150975,35.1566569819002,25.0027310247616,25.6526634547161,13.5293242247133,18.442228093878,22.3334762394331,13.09326906946,15.2065396829272,16.152114190228,5.47673941043627,4.14247797122848,8.5677611266444,10.6936444490856,8.39918529752175,7.18762821824858,0.335565212115473,0.725362142011344,2.01656279485478,10.5476368774738,12.8940047972441,16.5015069528782,28.5266209812033,26.9785399428737,27.2547503507657,2.71075625655306,3.55717918444456,14.3983954765024,11.8663963508037,9.2362414942993,5.39280198933128,6.53171119046643,10.9910989046986,7.96535036156975,9.25429829946081,33.7068161596488,39.7563373712904,19.7210186736076,15.5269663049543,22.0612508786405,67.1706874096271,77.8892762319645,62.2106459687786,28.0917792865313,29.7334841707831,35.4221091978597,56.6741487972803,80.4750532345302,62.9528780840458,44.1942878210502,51.5385484492753,38.0254869483613,10.298762293313,12.4693074176196,15.0729534124872,6.88339101585109,12.9194553404473,10.7940638327563,15.5946340187441,27.7776670000348,15.870219474888,11.759692257886,8.57293815189467,9.89350808628953,14.6477156567748,11.5493829672886,12.7402619853323,7.11066703153331,7.57718643539249,8.10751569520315,10.1104889002957,15.5290076417922,13.2058320660058,19.445920217492,6.41895709034703,6.08930956624282,8.99400439298628,9.94769427647309,17.7558947774914,10.4303270803631,16.0676729027343,9.25435884287435,8.84610551949874,7.27950824763341,6.40440403535141,7.27312879702833,11.1835056730873,42.1604347696628,53.6183569442445,11.4955674843866,5.03223522924865,4.79922184794726,6.98886248901856,81.0367359180091,129.015169994853,42.3455166620353,105.685186676904,100.24045927349,66.9077503481784,90.0439010026055,7.33243419722277,12.8139179728396,36.1393544560155,22.0963948680798,4.94457683258274,5.28774840196988,8.64298223065676,11.3028613376786,12.1104968489364,13.1957131893395,15.2733811032358,27.4225572983357,4.52692785158969,6.05139456537022,8.2697028357056,6.79506770525482,11.9560317167007,12.537077994798,18.7261744131229,3.38358253591438,2.80885274925294,9.52187256324446,9.66155897945015,2.89976081549703,4.45599513964083,3.24111710629827,4.49814997611899,7.67380503814875,5.86215028972037,9.53389173476672,4.56064782379353,12.1435956061856,7.40519324610662,13.2975645904067,12.4035278605159,13.5965988305559,11.1970558798436,15.2995317386824,98.4156959280115,28.4016730166825,13.2167513193519,6.34681359992506,4.47905326123991,4.18026009348789,5.92790322081629,5.04208811558356,4.66993892074228,7.60902504450237,8.54152310780121,10.8701310117847,10.304743560811,7.95825888164603,10.3330966173134,10.7858329038507,16.6426298403515,18.9184209591649,5.69003702859245,7.99739588268102,5.63538678365402,9.57161240872977,10.2794818198842,11.5724102819026,13.0899631847213,16.8275568696746,18.3688511574409,18.1393830965047,7.41131567717872,2.66952169145751,3.93117990226406,3.14806957338795,5.47722327748958,2.41177159752417,5.60176873919124,8.0554918486227,20.1047681201044,10.158772287959,12.9391385874619,14.8856379067401,13.4176199439261,8.5876818502018,8.25228102200796,14.473305640901,22.5398892003258,4.73728529426212,5.70377417547091,4.92260748748046,5.39787571063555,7.70528784232352,12.3782693260727,18.5376965464909,16.2364198429377,15.9454576547118,15.6265673284337,21.7938208571932,21.4129377513711,27.1940230133242,10.5553898757491,22.8440387203858,10.3270497333998,16.0043312856745,69.0367536947505,71.7335521944283,3.60656879828686,12.876017287423,8.51872192423893,8.19921363022941,6.67812532971677,9.31978312014953,9.35754431146055,11.6061377623421,9.31064613852257,9.35218745316198,9.88219444866309,101.216214672869,11.9229671574946,3.5613120733451,10.5876523579824,14.1874305756381,21.2392221343941,5.09839335925461,6.34879469625977,16.2200368590072,14.4697927511579,13.2197113615889,16.2809824695979,12.7236805317127,16.3988794056972,17.0659849285341,10.5418608574999,12.3762651897824,27.5756080660568,9.72329907769075,7.76152102696527,11.1455258216428,18.0887038315119,11.5939731441346,13.4930196893739,13.0919928119278,26.2832313031356,14.6164128896036,61.0863662612244,13.5206727412014,26.3187015514326,15.8019863311768,13.966564248367,12.3105674808796,11.659233465194,77.3223509383825,5.80960994712699,5.57244543500701,6.2966139305702,6.96963290917357,3.14396723758358,3.66045077130436,12.918360679533,12.0358248998346,12.9907975376158,28.6401185404534,4.11236791655476,9.35269548783504,11.3405607862891,15.8907104970996,15.0670168984863,19.1507371866445,22.647046868742,21.7257431846745,20.7383957266869,35.4163408459548,5.07323644815771,6.57872802593507,3.97100377097034,5.83353565032143,5.16639293910924,8.27885014904813,13.1440107283244,10.416350787516,16.5677764192623,12.0792060413003,10.3690802252832,3.79213344753814,3.85177909051312,4.41657115808757,3.50786222040047,3.40150721768215,6.15912199821921,3.96644983415897,5.02144392393563,5.55315474714812,5.10585604588499,5.24296162711571,3.70339946811059,2.88635524920988,4.32444538071805,15.8711268530648,11.3212836220773,5.65197296639697,12.927115460034,24.1486992540238,18.580565069667,11.9048555773722,15.6488916727718,71.724810877057,67.2054692714309,82.8585425712918,67.6016705858488,86.6140039012186,84.265149931789,94.4242371737126,101.928397535003,87.812634628723,94.2536210687146,94.750137050583,2.38710899443606,7.18244772121856,9.21961471072325,11.4260157022098,4.19226325255965,8.64064489715066,10.0011027510727,12.1560683770948,11.8740107548972,11.6240717411347,9.37873409593887,10.7517014590063,11.3306224038558,11.5245274328765,11.2573519153002,13.3362233559261,9.73428337936786,13.1178269915319,15.6592642305257,14.4254941731709,8.9146005620208,10.4710725634009,11.921809497366,9.59286349773368,10.540250606517,11.1691282417013,11.1586063452391,13.6796249947678,10.0495044245938,11.2228454331548,11.1516917036724,10.9339975436875,13.5046244245997,10.8455788830176,10.9956768259251,14.4890135204009,16.8430758080694,19.1235238102985,18.5549682106778,14.7796250810075,10.8977882741598
|phase1_expression=16.9757777931082,2.79180326111489,7.73498706962211,6.0492842261366,5.50985302940982,6.88305014838748,11.9142446703718,1.16210991097419,0.422366166455,0.468129052643987,0.171217968225505,0.398860794976682,0.513602189793617,0.174840804837995,3.66420737997229,3.03712901084739,0.699561878128147,0.315462165358238,0.411343300817216,2.54633791078818,25.3429004650188,6.55320277925843,8.8807928307238,10.3995074815714,11.0116454912242,5.16808767703518,9.04600191934057,7.97243560937789,13.4916627814025,12.8535366177565,12.6386391073524,0,1.23012957516914,0,2.59966457776147,3.32469290716985,4.28755648150975,35.1566569819002,25.0027310247616,25.6526634547161,13.5293242247133,18.442228093878,22.3334762394331,13.09326906946,15.2065396829272,16.152114190228,5.47673941043627,4.14247797122848,8.5677611266444,10.6936444490856,8.39918529752175,7.18762821824858,0.335565212115473,0.725362142011344,2.01656279485478,10.5476368774738,12.8940047972441,16.5015069528782,28.5266209812033,26.9785399428737,27.2547503507657,2.71075625655306,3.55717918444456,14.3983954765024,11.8663963508037,9.2362414942993,5.39280198933128,6.53171119046643,10.9910989046986,7.96535036156975,9.25429829946081,33.7068161596488,39.7563373712904,19.7210186736076,15.5269663049543,22.0612508786405,67.1706874096271,77.8892762319645,62.2106459687786,28.0917792865313,29.7334841707831,35.4221091978597,56.6741487972803,80.4750532345302,62.9528780840458,44.1942878210502,51.5385484492753,38.0254869483613,10.298762293313,12.4693074176196,15.0729534124872,6.88339101585109,12.9194553404473,10.7940638327563,15.5946340187441,27.7776670000348,15.870219474888,11.759692257886,8.57293815189467,9.89350808628953,14.6477156567748,11.5493829672886,12.7402619853323,7.11066703153331,7.57718643539249,8.10751569520315,10.1104889002957,15.5290076417922,13.2058320660058,19.445920217492,6.41895709034703,6.08930956624282,8.99400439298628,9.94769427647309,17.7558947774914,10.4303270803631,16.0676729027343,9.25435884287435,8.84610551949874,7.27950824763341,6.40440403535141,7.27312879702833,11.1835056730873,42.1604347696628,53.6183569442445,11.4955674843866,5.03223522924865,4.79922184794726,6.98886248901856,81.0367359180091,129.015169994853,42.3455166620353,105.685186676904,100.24045927349,66.9077503481784,90.0439010026055,7.33243419722277,12.8139179728396,36.1393544560155,22.0963948680798,4.94457683258274,5.28774840196988,8.64298223065676,11.3028613376786,12.1104968489364,13.1957131893395,15.2733811032358,27.4225572983357,4.52692785158969,6.05139456537022,8.2697028357056,6.79506770525482,11.9560317167007,12.537077994798,18.7261744131229,3.38358253591438,2.80885274925294,9.52187256324446,9.66155897945015,2.89976081549703,4.45599513964083,3.24111710629827,4.49814997611899,7.67380503814875,5.86215028972037,9.53389173476672,4.56064782379353,12.1435956061856,7.40519324610662,13.2975645904067,12.4035278605159,13.5965988305559,11.1970558798436,15.2995317386824,98.4156959280115,28.4016730166825,13.2167513193519,6.34681359992506,4.47905326123991,4.18026009348789,5.92790322081629,5.04208811558356,4.66993892074228,7.60902504450237,8.54152310780121,10.8701310117847,10.304743560811,7.95825888164603,10.3330966173134,10.7858329038507,16.6426298403515,18.9184209591649,5.69003702859245,7.99739588268102,5.63538678365402,9.57161240872977,10.2794818198842,11.5724102819026,13.0899631847213,16.8275568696746,18.3688511574409,18.1393830965047,7.41131567717872,2.66952169145751,3.93117990226406,3.14806957338795,5.47722327748958,2.41177159752417,5.60176873919124,8.0554918486227,20.1047681201044,10.158772287959,12.9391385874619,14.8856379067401,13.4176199439261,8.5876818502018,8.25228102200796,14.473305640901,22.5398892003258,4.73728529426212,5.70377417547091,4.92260748748046,5.39787571063555,7.70528784232352,12.3782693260727,18.5376965464909,16.2364198429377,15.9454576547118,15.6265673284337,21.7938208571932,21.4129377513711,27.1940230133242,10.5553898757491,22.8440387203858,10.3270497333998,16.0043312856745,69.0367536947505,71.7335521944283,3.60656879828686,12.876017287423,8.51872192423893,8.19921363022941,6.67812532971677,9.31978312014953,9.35754431146055,11.6061377623421,9.31064613852257,9.35218745316198,9.88219444866309,101.216214672869,11.9229671574946,3.5613120733451,10.5876523579824,14.1874305756381,21.2392221343941,5.09839335925461,6.34879469625977,16.2200368590072,14.4697927511579,13.2197113615889,16.2809824695979,12.7236805317127,16.3988794056972,17.0659849285341,10.5418608574999,12.3762651897824,27.5756080660568,9.72329907769075,7.76152102696527,11.1455258216428,18.0887038315119,11.5939731441346,13.4930196893739,13.0919928119278,26.2832313031356,14.6164128896036,61.0863662612244,13.5206727412014,26.3187015514326,15.8019863311768,13.966564248367,12.3105674808796,11.659233465194,77.3223509383825,5.80960994712699,5.57244543500701,6.2966139305702,6.96963290917357,3.14396723758358,3.66045077130436,12.918360679533,12.0358248998346,12.9907975376158,28.6401185404534,4.11236791655476,9.35269548783504,11.3405607862891,15.8907104970996,15.0670168984863,19.1507371866445,22.647046868742,21.7257431846745,20.7383957266869,35.4163408459548,5.07323644815771,6.57872802593507,3.97100377097034,5.83353565032143,5.16639293910924,8.27885014904813,13.1440107283244,10.416350787516,16.5677764192623,12.0792060413003,10.3690802252832,3.79213344753814,3.85177909051312,4.41657115808757,3.50786222040047,3.40150721768215,6.15912199821921,3.96644983415897,5.02144392393563,5.55315474714812,5.10585604588499,5.24296162711571,3.70339946811059,2.88635524920988,4.32444538071805,15.8711268530648,11.3212836220773,5.65197296639697,12.927115460034,24.1486992540238,18.580565069667,11.9048555773722,15.6488916727718,71.724810877057,67.2054692714309,82.8585425712918,67.6016705858488,86.6140039012186,84.265149931789,94.4242371737126,101.928397535003,87.812634628723,94.2536210687146,94.750137050583,2.38710899443606,7.18244772121856,9.21961471072325,11.4260157022098,4.19226325255965,8.64064489715066,10.0011027510727,12.1560683770948,11.8740107548972,11.6240717411347,9.37873409593887,10.7517014590063,11.3306224038558,11.5245274328765,11.2573519153002,13.3362233559261,9.73428337936786,13.1178269915319,15.6592642305257,14.4254941731709,8.9146005620208,10.4710725634009,11.921809497366,9.59286349773368,10.540250606517,11.1691282417013,11.1586063452391,13.6796249947678,10.0495044245938,11.2228454331548,11.1516917036724,10.9339975436875,13.5046244245997,10.8455788830176,10.9956768259251,14.4890135204009,16.8430758080694,19.1235238102985,18.5549682106778,14.7796250810075,10.8977882741598
|short_description=p2@Scamp1
|short_description=p2@Scamp1
}}
}}

Revision as of 19:52, 18 April 2012

Short description:p2@Scamp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Scamp1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_029153, uc007rls.1_5end
EntrezGene:Scamp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Scamp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.05
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A325.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.88
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.01
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I19.05
GP2+ M cell, pool3.CNhs13240.11847-124I27.97
Ileum epithelium, pool1.CNhs13199.10252-104B913.49
Ileum epithelium, pool2.CNhs13232.10253-104C112.85
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G835.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H325.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G913.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H422.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.09
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.21
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.15
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.57
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.55
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C516.50
Mouse Granule cells, donor1.CNhs12131.11713-123C328.53
Mouse Granule cells, donor2.CNhs12357.11731-123E326.98
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C714.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.99
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F133.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.76
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D367.17
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F377.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D762.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E456.67
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E580.48
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I662.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D644.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F651.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E138.03
Mouse Schwann, donor1.CNhs12507.11728-123D910.30
Mouse Schwann, donor2.CNhs12573.11746-123F912.47
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F627.78
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A715.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.53
accessory axillary lymph node, adult.CNhs10475.1063-29H913.21
adrenal gland, adult.CNhs10508.49-24D719.45
adrenal gland, embryo E14.CNhs11038.406-44C56.42
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I18.99
adrenal gland, embryo E18.CNhs11026.1262-18F59.95
adrenal gland, neonate N00.CNhs11191.1311-23C117.76
adrenal gland, neonate N25.CNhs11223.1377-27I310.43
amnion, adult pregnant day17.5.CNhs10488.583-22A816.07
aorta, adult.CNhs10498.46-23H19.25
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F57.28
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B242.16
cerebellum, neonate N30.CNhs11135.1395-42I253.62
colon, adult.CNhs10468.36-18H711.50
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.99
corpora quadrigemina, adult.CNhs10501.16-22A481.04
corpus striatum, adult.CNhs10487.19-21D8129.02
corpus striatum, neonate N00.CNhs11226.630-43F142.35
cortex, adult.CNhs10473.12-14D5105.69
cortex, neonate N30.CNhs11107.1392-42F2100.24
diencephalon, adult.CNhs10482.20-12F266.91
diencephalon, neonate N30.CNhs11201.1388-42B290.04
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.33
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.81
epididymis, adult.CNhs10490.58-23B236.14
eyeball, adult.CNhs10484.31-12G422.10
eyeball, embryo E12.CNhs11016.345-16C64.94
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C98.64
eyeball, embryo E17.CNhs11023.1261-18D411.30
eyeball, neonate N00.CNhs11207.633-15C612.11
eyeball, neonate N01.CNhs11140.1532-43E713.20
eyeball, neonate N02.CNhs11205.1551-44G815.27
eyeball, neonate N16.CNhs11188.777-19A227.42
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H26.05
forelimb, embryo E13.CNhs10589.384-1E28.27
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E711.96
forelimb, embryo E17.CNhs10598.1517-43C412.54
forelimb, embryo E18.CNhs11008.1520-43B518.73
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.52
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.66
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C65.86
heart, embryo E17.CNhs11025.479-18E59.53
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E312.14
heart, neonate N03.CNhs11221.1349-25I27.41
heart, neonate N10.CNhs11118.749-24G113.30
heart, neonate N16.CNhs11209.782-15G112.40
heart, neonate N20.CNhs11127.821-26I613.60
heart, neonate N25.CNhs11196.1351-25D311.20
heart, neonate N30.CNhs11202.1390-42D215.30
hippocampus, adult.CNhs10478.13-16E898.42
hippocampus, neonate N00.CNhs11228.627-43G128.40
intestinal mucosa, adult.CNhs10506.860-29I313.22
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I54.48
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D85.93
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D34.67
intestine, embryo E18.CNhs10526.1289-20F77.61
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E910.87
intestine, neonate N06.CNhs11102.688-20B810.30
intestine, neonate N07.CNhs11095.720-20F27.96
intestine, neonate N10.CNhs11098.755-23A510.33
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E316.64
intestine, neonate N30.CNhs11131.1384-42G118.92
kidney, embryo E14.CNhs10606.411-4I95.69
kidney, embryo E15.CNhs10997.434-16F88.00
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I29.57
kidney, embryo E18.CNhs11001.1288-20C710.28
kidney, neonate N00.CNhs11214.646-21G711.57
kidney, neonate N10.CNhs11206.758-6D513.09
kidney, neonate N20.CNhs11113.832-19I116.83
kidney, neonate N25.CNhs11122.1353-25F318.37
kidney, neonate N30.CNhs11203.1385-42H118.14
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F420.10
liver, neonate N03.CNhs11123.1345-25G210.16
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H214.89
liver, neonate N10.CNhs11115.751-24B913.42
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H18.25
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B122.54
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F85.70
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A67.71
lung, embryo E18.CNhs10583.1287-20I612.38
lung, neonate N00.CNhs11224.640-42C618.54
lung, neonate N06.CNhs11212.683-20E516.24
lung, neonate N07.CNhs11111.715-19A315.95
lung, neonate N10.CNhs11219.750-23E615.63
lung, neonate N20.CNhs11109.822-18A421.79
lung, neonate N25.CNhs11119.1359-25C721.41
lung, neonate N30.CNhs11133.1394-42H227.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A122.84
mammary gland, adult lactating day02.CNhs10480.595-22B610.33
mammary gland, adult pregnant day19.CNhs10476.588-5H216.00
medulla oblongata, adult.CNhs10477.17-12C269.04
medulla oblongata, neonate N30.CNhs11200.1396-42A371.73
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.88
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.20
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.32
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.35
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I9101.22
ovary, adult.CNhs10507.91-2I711.92
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I410.59
oviduct, adult pregnant day01.CNhs10500.988-6G614.19
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E516.22
pancreas, embryo E17.CNhs10599.1558-45G314.47
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G916.28
pancreas, neonate N01.CNhs11138.1531-43D712.72
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B617.07
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G827.58
pituitary gland, embryo E12.CNhs11018.346-16E69.72
pituitary gland, embryo E13.CNhs11009.370-44C77.76
pituitary gland, embryo E14.CNhs11037.398-44A511.15
pituitary gland, embryo E15.CNhs10592.427-16B918.09
pituitary gland, embryo E16.CNhs11036.449-43F611.59
pituitary gland, embryo E17.CNhs11039.1265-44F513.49
pituitary gland, neonate N00.CNhs11190.1308-22E913.09
placenta, adult pregnant day10.CNhs10472.539-13I726.28
placenta, adult pregnant day17.CNhs10464.577-18G314.62
prostate, adult.CNhs10470.859-1F861.09
skin, adult.CNhs10492.30-1C313.52
skin, neonate N00.CNhs11124.650-25G426.32
skin, neonate N03.CNhs11215.662-22H315.80
skin, neonate N06.CNhs11097.693-20I513.97
skin, neonate N10.CNhs11108.762-6C412.31
small intestine, neonate N16.CNhs11114.790-21I111.66
spinal cord, adult.CNhs10505.24-13C977.32
spleen, adult.CNhs10465.25-2G25.81
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F26.30
spleen, neonate N10.CNhs11116.752-24D16.97
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.99
stomach, adult.CNhs10503.33-1H628.64
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G89.35
stomach, embryo E16.CNhs11022.459-17D411.34
stomach, embryo E17.CNhs11006.1035-18D515.89
stomach, embryo E18.CNhs10999.1286-20C615.07
stomach, neonate N03.CNhs11193.1340-24B819.15
stomach, neonate N07.CNhs11210.718-18A922.65
stomach, neonate N25.CNhs11104.1355-25E421.73
stomach, neonate N30.CNhs11134.1386-42I120.74
submandibular gland, adult.CNhs10469.59-29C135.42
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F56.58
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I55.17
testis, embryo E18.CNhs11027.503-18G58.28
testis, neonate N00.CNhs11189.1300-22B713.14
testis, neonate N07.CNhs11222.726-26I410.42
testis, neonate N10.CNhs11204.763-44D916.57
testis, neonate N20.CNhs11110.839-18H312.08
testis, neonate N30.CNhs11130.1391-42E210.37
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I24.42
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F83.97
thymus, neonate N03.CNhs11137.2104-43C75.02
thymus, neonate N06.CNhs11197.681-26C45.55
thymus, neonate N07.CNhs11211.713-19D35.11
thymus, neonate N10.CNhs11194.748-24E45.24
thymus, neonate N20.CNhs11186.820-7A23.70
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G24.32
tongue, adult.CNhs10499.32-1B415.87
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.65
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.93
urinary bladder, adult.CNhs10481.879-12E424.15
uterus, adult pregnant day19.CNhs10497.590-15F518.58
uterus, adult.CNhs10509.92-27E511.90
vagina, adult.CNhs10502.89-27D515.65
vesicular gland, adult.CNhs10491.51-27F871.72
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A167.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A282.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A367.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D786.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A484.27
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A594.42
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6101.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A787.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A894.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A994.75
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H29.22
whole body, embryo E14.5.CNhs10578.420-27D211.43
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F28.64
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.62
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.43
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.47
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.59
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.85
whole body, embryo E17.5.CNhs10513.490-9F911.00
whole body, embryo E17.CNhs10517.475-3I514.49
whole body, embryo E18.CNhs10516.493-3B316.84
whole body, neonate N00.CNhs10525.657-19C219.12
whole body, neonate N01.CNhs10576.659-23C618.55
whole body, neonate N06.CNhs10515.692-21D114.78
whole body, neonate N10.CNhs10518.761-6B410.90





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:95055236..95055297,-&oldid=943676"