Personal tools

FFCP PHASE1:Mm9::chr7:109416309..109416368,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:109416309..109416368,+
|short_description=p1@Stim1
|description=CAGE_peak_1_at_Stim1_5end
|association_with_transcript=0bp_to_ENSMUST00000033289,NM_009287,uc009irl.1,uc009irm.1_5end
|EntrezGene=20866
|EntrezGene=20866
|HGNC=
|HGNC=
|UniProt=P70302
|UniProt=P70302
|association_with_transcript=0bp_to_ENSMUST00000033289,NM_009287,uc009irl.1,uc009irm.1_5end
|description=CAGE_peak_1_at_Stim1_5end
|id=chr7:109416309..109416368,+
|ontology_enrichment_disease=
|phase1_expression=6.40595388419176,5.58360652222978,12.739978702907,24.4996011158532,33.5600139064053,14.2697381125106,13.783145795136,34.2176807120177,69.5496287429234,54.3029701067025,5.65019295144166,8.05698805852898,42.8001824828014,52.1025598417225,19.6534759471241,23.6896062846096,13.2916756844348,18.4545366734569,19.8815928728321,19.0975343309114,17.5189177711204,10.425549876093,6.79119451761232,8.63959083084396,9.40578052375397,10.9104073181854,15.5074318617267,6.89507944594845,22.2327400763957,12.8535366177565,9.5344119581781,12.065582795733,11.6862309641068,0,10.6875099307972,11.137721239019,10.2084678131185,62.3612129797993,38.2854318816662,29.8408534065065,47.0585190424811,60.7910481613017,38.8408282424923,39.1539103904045,42.0714264560985,25.5129985504737,82.9334825008922,22.8926414199469,36.9072786993913,41.2191386037481,31.6369312873319,30.188038516644,13.9259563027921,56.5782470768849,50.4140698713696,29.327575708098,35.2436131124671,60.8493068887382,1.41621522601718,2.11596391708813,0,21.0083609882862,22.2323699027785,20.2477436388315,29.6659908770092,29.1296847127901,27.8628102782116,42.264013585371,1.14058573539325,2.70011876663381,2.52389953621658,3.71346279724945,5.74258206474195,1.10241719293459,1.53352753629178,0,11.0115880999389,8.42736431362239,8.60196586234964,0.263772575460388,1.46380229763855,1.04182674111352,8.09630697104005,12.380777420697,10.8486755921535,2.94628585473668,5.12538050876771,2.42319279572891,5.37655972665607,8.53958629206676,37.9722480199198,32.6961073252927,16.9992833426938,16.1910957491345,32.4888208723835,25.5375325645481,34.549327352411,5.62420064507591,4.93593408745451,6.00677276667578,8.87313544593087,11.5493829672886,25.4805239706646,7.11066703153331,4.97929394325792,5.06719730950197,4.54972000513305,27.6324988920125,20.9739685754209,20.9303416081403,8.50078101154066,16.1366703505435,16.3737003051802,15.5244319769201,20.8132011630198,18.8499886994513,77.1248299331246,44.247403217493,49.538190909193,51.6036251332235,49.0268170982074,24.7286379098963,37.2783522436244,19.6163133997737,37.4909605196085,25.2902484656505,5.39168060276641,5.39912457894067,4.95573885584952,14.379901382863,13.7250180845588,3.5183218591602,11.4724051326902,10.2286182932132,12.4672826735736,17.5220564113178,10.8968119319838,25.6278359456792,11.625246887949,42.5092548890677,4.68433594665733,6.43725892413724,6.30217454318722,8.59017461663576,13.1310443362063,9.86475646193343,10.3071897015702,21.9897865128163,4.74249584452253,6.05139456537022,4.75068035242662,7.45265490253754,11.3999372182495,21.2433821578522,20.3724315043864,11.5439874754726,2.80885274925294,6.17634977075316,11.3665399758237,4.97101854085205,2.57978665979206,4.14142741360334,5.44512891845984,4.13204886669548,5.707883176833,4.41814495025775,6.17028823219124,8.05680862333469,6.41783414662574,10.6708851651412,11.1874957173281,10.2339991197733,12.2948064562988,13.0180226197561,9.04246778825747,4.01327988279209,27.4247589876552,18.5115396664481,4.69234151177515,6.96710015581316,7.86091514064769,8.26902450955704,8.00560957841533,11.223311940641,24.6755112003146,14.3288090609889,22.1174983744237,20.2935601481974,21.056121408865,21.5716658077013,26.3688420847127,30.4686148079182,2.65535061334314,4.11294645395024,3.38123207019241,4.68398054044223,3.87904974335251,6.52263124979963,8.97958827164453,10.9231509504906,9.73392112616524,15.9182341459123,24.6055680482334,9.17648081438517,11.7935397067922,9.44420872016386,13.3887680116412,15.6765153839071,14.7682994033223,25.892652370573,27.0765828714309,21.4157902286704,53.1942364151212,25.3055844414582,26.2111645416231,27.025939940341,21.7070870361514,34.7359335381624,24.9416806724916,3.7898282354097,3.7481944581666,4.92260748748046,4.45911471748154,6.70025029767263,8.09348379012447,16.1960927721973,12.2955412402829,11.9590932410338,15.4671125597762,19.1720078217413,22.4490476425664,28.9298117163023,13.5712155545345,12.5098307278303,6.88469982226651,11.5893433447988,13.9679013289379,20.3948334670434,4.91804836130026,103.765551080997,5.04813151066011,5.46614242015294,5.17016154558717,5.9742199488138,7.79795359288379,7.35998980050964,8.50102473517278,8.18316402151673,7.51046778098395,13.8168166061377,15.0456490320765,16.025904330053,14.8227133011754,22.2709666012923,34.5137359683903,8.01176099311439,7.25576536715402,6.41257271170054,12.4026795009925,11.9899707698132,17.3146956422708,16.3590178264877,15.329387270543,30.6555655197742,29.5172104009997,26.8152412445286,14.9793426531667,6.12207719706455,6.20921682157222,6.64444808597936,8.86701168211368,8.38333442729732,8.88564711251453,19.1812917942198,49.5157304014429,42.5782462436279,48.7367759701466,71.7255200295438,39.0743912604091,29.2517685901556,30.9174370968123,39.0655341393246,23.3184669303881,15.2048747648618,28.8771788548371,17.5428837768739,15.3711457716861,20.3437933565066,23.3747129402953,21.0475919350001,11.3885548095883,10.3564074719507,12.9907975376158,21.9574242143476,2.84702394223022,7.9294592179471,6.58832579012988,14.2180041289839,14.1935666435015,20.9039736896472,28.1848284023396,29.8401773861794,39.0141069608297,65.8619671872141,3.94585057078933,18.5400517094534,10.9202603701684,13.8060343724274,9.42866711387437,10.4752797804282,13.848154160199,22.0045410386276,33.345271527376,30.9227674657288,36.8678408010068,30.6530787009333,7.50083296573608,7.60061083019722,10.133824192268,15.9333759144058,16.2918710920637,18.1495128775153,21.2672919131391,16.1546319917036,20.804458216815,21.0726726935997,24.1695544234586,24.245384093363,30.2711176650264,68.4725758517938,14.8730588760623,14.6233586273445,20.4819231964176,35.7400748959552,28.7154187440308,12.6374620744413,27.2247841430414,38.621052010723,6.7770221114048,5.9842280745933,4.01026859407578,8.76451229952807,8.22099023724771,6.7985450765073,6.75022500231806,5.85417564191487,9.06284817968409,7.24864436452548,0.93408612825759,5.98537310101547,5.63420898988643,11.9122291363464,3.5634237646757,9.74370594785075,27.7808409752019,25.5483470976229,28.2408904440797,27.0386016587263,24.5874920893533,21.3147765766266,26.0323390766273,27.2106897720694,25.6162191542035,26.1961530205691,25.9580890116476,26.6214724239913,37.9119028739042,21.9326391000252,22.9722399098228,21.8295241575985,24.5589275645741,22.5286945780109,22.8685794409253,23.4382463859944,24.8782043106971,20.7825072035896,22.4076787845672,24.1291176812828,25.86243395107,26.3006967942754,20.4615521584845,24.1701472250107,23.3416999287181,19.2354145012218,27.1360665796674,29.8670765127135,46.1004880285913,51.3978006548471,47.5329063021864
|phase1_expression=6.40595388419176,5.58360652222978,12.739978702907,24.4996011158532,33.5600139064053,14.2697381125106,13.783145795136,34.2176807120177,69.5496287429234,54.3029701067025,5.65019295144166,8.05698805852898,42.8001824828014,52.1025598417225,19.6534759471241,23.6896062846096,13.2916756844348,18.4545366734569,19.8815928728321,19.0975343309114,17.5189177711204,10.425549876093,6.79119451761232,8.63959083084396,9.40578052375397,10.9104073181854,15.5074318617267,6.89507944594845,22.2327400763957,12.8535366177565,9.5344119581781,12.065582795733,11.6862309641068,0,10.6875099307972,11.137721239019,10.2084678131185,62.3612129797993,38.2854318816662,29.8408534065065,47.0585190424811,60.7910481613017,38.8408282424923,39.1539103904045,42.0714264560985,25.5129985504737,82.9334825008922,22.8926414199469,36.9072786993913,41.2191386037481,31.6369312873319,30.188038516644,13.9259563027921,56.5782470768849,50.4140698713696,29.327575708098,35.2436131124671,60.8493068887382,1.41621522601718,2.11596391708813,0,21.0083609882862,22.2323699027785,20.2477436388315,29.6659908770092,29.1296847127901,27.8628102782116,42.264013585371,1.14058573539325,2.70011876663381,2.52389953621658,3.71346279724945,5.74258206474195,1.10241719293459,1.53352753629178,0,11.0115880999389,8.42736431362239,8.60196586234964,0.263772575460388,1.46380229763855,1.04182674111352,8.09630697104005,12.380777420697,10.8486755921535,2.94628585473668,5.12538050876771,2.42319279572891,5.37655972665607,8.53958629206676,37.9722480199198,32.6961073252927,16.9992833426938,16.1910957491345,32.4888208723835,25.5375325645481,34.549327352411,5.62420064507591,4.93593408745451,6.00677276667578,8.87313544593087,11.5493829672886,25.4805239706646,7.11066703153331,4.97929394325792,5.06719730950197,4.54972000513305,27.6324988920125,20.9739685754209,20.9303416081403,8.50078101154066,16.1366703505435,16.3737003051802,15.5244319769201,20.8132011630198,18.8499886994513,77.1248299331246,44.247403217493,49.538190909193,51.6036251332235,49.0268170982074,24.7286379098963,37.2783522436244,19.6163133997737,37.4909605196085,25.2902484656505,5.39168060276641,5.39912457894067,4.95573885584952,14.379901382863,13.7250180845588,3.5183218591602,11.4724051326902,10.2286182932132,12.4672826735736,17.5220564113178,10.8968119319838,25.6278359456792,11.625246887949,42.5092548890677,4.68433594665733,6.43725892413724,6.30217454318722,8.59017461663576,13.1310443362063,9.86475646193343,10.3071897015702,21.9897865128163,4.74249584452253,6.05139456537022,4.75068035242662,7.45265490253754,11.3999372182495,21.2433821578522,20.3724315043864,11.5439874754726,2.80885274925294,6.17634977075316,11.3665399758237,4.97101854085205,2.57978665979206,4.14142741360334,5.44512891845984,4.13204886669548,5.707883176833,4.41814495025775,6.17028823219124,8.05680862333469,6.41783414662574,10.6708851651412,11.1874957173281,10.2339991197733,12.2948064562988,13.0180226197561,9.04246778825747,4.01327988279209,27.4247589876552,18.5115396664481,4.69234151177515,6.96710015581316,7.86091514064769,8.26902450955704,8.00560957841533,11.223311940641,24.6755112003146,14.3288090609889,22.1174983744237,20.2935601481974,21.056121408865,21.5716658077013,26.3688420847127,30.4686148079182,2.65535061334314,4.11294645395024,3.38123207019241,4.68398054044223,3.87904974335251,6.52263124979963,8.97958827164453,10.9231509504906,9.73392112616524,15.9182341459123,24.6055680482334,9.17648081438517,11.7935397067922,9.44420872016386,13.3887680116412,15.6765153839071,14.7682994033223,25.892652370573,27.0765828714309,21.4157902286704,53.1942364151212,25.3055844414582,26.2111645416231,27.025939940341,21.7070870361514,34.7359335381624,24.9416806724916,3.7898282354097,3.7481944581666,4.92260748748046,4.45911471748154,6.70025029767263,8.09348379012447,16.1960927721973,12.2955412402829,11.9590932410338,15.4671125597762,19.1720078217413,22.4490476425664,28.9298117163023,13.5712155545345,12.5098307278303,6.88469982226651,11.5893433447988,13.9679013289379,20.3948334670434,4.91804836130026,103.765551080997,5.04813151066011,5.46614242015294,5.17016154558717,5.9742199488138,7.79795359288379,7.35998980050964,8.50102473517278,8.18316402151673,7.51046778098395,13.8168166061377,15.0456490320765,16.025904330053,14.8227133011754,22.2709666012923,34.5137359683903,8.01176099311439,7.25576536715402,6.41257271170054,12.4026795009925,11.9899707698132,17.3146956422708,16.3590178264877,15.329387270543,30.6555655197742,29.5172104009997,26.8152412445286,14.9793426531667,6.12207719706455,6.20921682157222,6.64444808597936,8.86701168211368,8.38333442729732,8.88564711251453,19.1812917942198,49.5157304014429,42.5782462436279,48.7367759701466,71.7255200295438,39.0743912604091,29.2517685901556,30.9174370968123,39.0655341393246,23.3184669303881,15.2048747648618,28.8771788548371,17.5428837768739,15.3711457716861,20.3437933565066,23.3747129402953,21.0475919350001,11.3885548095883,10.3564074719507,12.9907975376158,21.9574242143476,2.84702394223022,7.9294592179471,6.58832579012988,14.2180041289839,14.1935666435015,20.9039736896472,28.1848284023396,29.8401773861794,39.0141069608297,65.8619671872141,3.94585057078933,18.5400517094534,10.9202603701684,13.8060343724274,9.42866711387437,10.4752797804282,13.848154160199,22.0045410386276,33.345271527376,30.9227674657288,36.8678408010068,30.6530787009333,7.50083296573608,7.60061083019722,10.133824192268,15.9333759144058,16.2918710920637,18.1495128775153,21.2672919131391,16.1546319917036,20.804458216815,21.0726726935997,24.1695544234586,24.245384093363,30.2711176650264,68.4725758517938,14.8730588760623,14.6233586273445,20.4819231964176,35.7400748959552,28.7154187440308,12.6374620744413,27.2247841430414,38.621052010723,6.7770221114048,5.9842280745933,4.01026859407578,8.76451229952807,8.22099023724771,6.7985450765073,6.75022500231806,5.85417564191487,9.06284817968409,7.24864436452548,0.93408612825759,5.98537310101547,5.63420898988643,11.9122291363464,3.5634237646757,9.74370594785075,27.7808409752019,25.5483470976229,28.2408904440797,27.0386016587263,24.5874920893533,21.3147765766266,26.0323390766273,27.2106897720694,25.6162191542035,26.1961530205691,25.9580890116476,26.6214724239913,37.9119028739042,21.9326391000252,22.9722399098228,21.8295241575985,24.5589275645741,22.5286945780109,22.8685794409253,23.4382463859944,24.8782043106971,20.7825072035896,22.4076787845672,24.1291176812828,25.86243395107,26.3006967942754,20.4615521584845,24.1701472250107,23.3416999287181,19.2354145012218,27.1360665796674,29.8670765127135,46.1004880285913,51.3978006548471,47.5329063021864
|short_description=p1@Stim1
}}
}}

Revision as of 21:21, 18 April 2012

Short description:p1@Stim1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Stim1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000033289, NM_009287, uc009irl.1, uc009irm.1_5end
EntrezGene:Stim1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Stim1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I324.50
CD326+ enterocyte, pool2.CNhs13197.11849-124I433.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.27
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.78
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E934.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E769.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F254.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.06
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E442.80
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E852.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A119.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A323.69
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A218.45
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.79
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.41
GP2+ M cell, pool1.CNhs13228.11845-124H910.91
GP2+ M cell, pool2.CNhs13231.11846-124I115.51
GP2+ M cell, pool3.CNhs13240.11847-124I26.90
Ileum epithelium, pool1.CNhs13199.10252-104B922.23
Ileum epithelium, pool2.CNhs13232.10253-104C112.85
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.21
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G862.36
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H138.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H329.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G947.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H260.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H438.84
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D839.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D942.07
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B325.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B782.93
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C222.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B836.91
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C341.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C431.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C430.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.93
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I956.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A150.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C129.33
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E135.24
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C560.85
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.01
Mouse Meningeal cells, donor3.CNhs12109.11639-122D122.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C720.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E729.67
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D229.13
Mouse Microglia, donor1.CNhs12629.11718-123C827.86
Mouse Microglia, donor2.CNhs12634.11736-123E842.26
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D95.38
Mouse Schwann, donor2.CNhs12573.11746-123F98.54
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G337.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F732.70
Mouse hepatocyte, donor1.CNhs13078.11714-123C417.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C816.19
Mouse hepatocyte, donor6.CNhs13090.11822-124F432.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F625.54
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A734.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.87
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.63
accessory axillary lymph node, adult.CNhs10475.1063-29H920.97
adrenal gland, adult.CNhs10508.49-24D720.93
adrenal gland, embryo E14.CNhs11038.406-44C58.50
adrenal gland, embryo E16.CNhs11004.1254-43D616.14
adrenal gland, embryo E17.CNhs11043.1263-45I116.37
adrenal gland, embryo E18.CNhs11026.1262-18F515.52
adrenal gland, neonate N00.CNhs11191.1311-23C120.81
adrenal gland, neonate N25.CNhs11223.1377-27I318.85
amnion, adult pregnant day17.5.CNhs10488.583-22A877.12
aorta, adult.CNhs10498.46-23H144.25
bone (os femoris), adult.CNhs10483.56-12G249.54
bone (os femoris), neonate N02.CNhs11227.1985-43F551.60
bone (os femoris), neonate N16.CNhs11225.1525-43A649.03
bone (os femoris), neonate N20.CNhs11195.1350-25C324.73
cecum, adult.CNhs10467.37-13H437.28
cerebellum, adult.CNhs10494.15-8B219.62
cerebellum, neonate N30.CNhs11135.1395-42I237.49
colon, adult.CNhs10468.36-18H725.29
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.96
corpora quadrigemina, adult.CNhs10501.16-22A414.38
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D511.47
cortex, neonate N30.CNhs11107.1392-42F210.23
diencephalon, adult.CNhs10482.20-12F212.47
diencephalon, neonate N30.CNhs11201.1388-42B217.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.90
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.63
epididymis, adult.CNhs10490.58-23B211.63
eyeball, adult.CNhs10484.31-12G442.51
eyeball, embryo E12.CNhs11016.345-16C64.68
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C96.30
eyeball, embryo E17.CNhs11023.1261-18D48.59
eyeball, neonate N00.CNhs11207.633-15C613.13
eyeball, neonate N01.CNhs11140.1532-43E79.86
eyeball, neonate N02.CNhs11205.1551-44G810.31
eyeball, neonate N16.CNhs11188.777-19A221.99
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H26.05
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A87.45
forelimb, embryo E15.CNhs11007.437-20E711.40
forelimb, embryo E17.CNhs10598.1517-43C421.24
forelimb, embryo E18.CNhs11008.1520-43B520.37
gonad, embryo E13.CNhs11044.1564-45I611.54
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.37
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I94.14
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C65.71
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E38.06
heart, neonate N03.CNhs11221.1349-25I26.42
heart, neonate N10.CNhs11118.749-24G110.67
heart, neonate N16.CNhs11209.782-15G111.19
heart, neonate N20.CNhs11127.821-26I610.23
heart, neonate N25.CNhs11196.1351-25D312.29
heart, neonate N30.CNhs11202.1390-42D213.02
hippocampus, adult.CNhs10478.13-16E89.04
hippocampus, neonate N00.CNhs11228.627-43G14.01
intestinal mucosa, adult.CNhs10506.860-29I327.42
intestine, adult.CNhs10496.178-9A318.51
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D87.86
intestine, embryo E16.CNhs10585.463-22H48.27
intestine, embryo E17.CNhs10582.482-18D38.01
intestine, embryo E18.CNhs10526.1289-20F711.22
intestine, neonate N00.CNhs11126.644-26D124.68
intestine, neonate N01.CNhs11192.1322-23E914.33
intestine, neonate N06.CNhs11102.688-20B822.12
intestine, neonate N07.CNhs11095.720-20F220.29
intestine, neonate N10.CNhs11098.755-23A521.06
intestine, neonate N20.CNhs11187.827-18D121.57
intestine, neonate N25.CNhs11121.1352-25E326.37
intestine, neonate N30.CNhs11131.1384-42G130.47
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F84.11
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I24.68
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G76.52
kidney, neonate N10.CNhs11206.758-6D58.98
kidney, neonate N20.CNhs11113.832-19I110.92
kidney, neonate N25.CNhs11122.1353-25F39.73
kidney, neonate N30.CNhs11203.1385-42H115.92
liver, adult pregnant day01.CNhs10466.508-5B224.61
liver, embryo E12.CNhs10601.355-15F89.18
liver, embryo E13.CNhs10524.378-3H611.79
liver, embryo E14.CNhs10594.409-16E19.44
liver, embryo E15.CNhs10520.433-16D713.39
liver, embryo E16.CNhs10523.462-17F515.68
liver, embryo E17.CNhs10510.481-18A314.77
liver, embryo E18.CNhs10579.499-43G425.89
liver, neonate N00.CNhs11117.641-24F427.08
liver, neonate N03.CNhs11123.1345-25G221.42
liver, neonate N06.CNhs11101.684-20A853.19
liver, neonate N07.CNhs11103.716-20H225.31
liver, neonate N10.CNhs11115.751-24B926.21
liver, neonate N20.CNhs11220.823-25A327.03
liver, neonate N25.CNhs11198.1368-26H121.71
liver, neonate N30.CNhs11106.1382-42D134.74
lung, adult.CNhs10474.28-22B124.94
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B64.46
lung, embryo E17.CNhs10605.480-44A66.70
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C616.20
lung, neonate N06.CNhs11212.683-20E512.30
lung, neonate N07.CNhs11111.715-19A311.96
lung, neonate N10.CNhs11219.750-23E615.47
lung, neonate N20.CNhs11109.822-18A419.17
lung, neonate N25.CNhs11119.1359-25C722.45
lung, neonate N30.CNhs11133.1394-42H228.93
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A112.51
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H211.59
medulla oblongata, adult.CNhs10477.17-12C213.97
medulla oblongata, neonate N30.CNhs11200.1396-42A320.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2103.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.97
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I913.82
ovary, adult.CNhs10507.91-2I715.05
ovary, embryo E18.CNhs11040.505-44H716.03
ovary, neonate N00.CNhs11217.1299-22I414.82
oviduct, adult pregnant day01.CNhs10500.988-6G622.27
pancreas, adult.CNhs10486.34-16E434.51
pancreas, embryo E14.CNhs11012.405-44F48.01
pancreas, embryo E15.CNhs11042.1556-45F27.26
pancreas, embryo E16.CNhs11003.460-26E56.41
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I711.99
pancreas, neonate N00.CNhs11105.645-26G917.31
pancreas, neonate N01.CNhs11138.1531-43D716.36
pancreas, neonate N02.CNhs11139.1539-43D815.33
pancreas, neonate N16.CNhs11136.787-43B630.66
pancreas, neonate N25.CNhs11094.1555-45E229.52
pancreas, neonate N30.CNhs11182.1548-44H526.82
pituitary gland, adult.CNhs10493.21-1G814.98
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C76.21
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B98.87
pituitary gland, embryo E16.CNhs11036.449-43F68.38
pituitary gland, embryo E17.CNhs11039.1265-44F58.89
pituitary gland, neonate N00.CNhs11190.1308-22E919.18
placenta, adult pregnant day10.CNhs10472.539-13I749.52
placenta, adult pregnant day17.CNhs10464.577-18G342.58
prostate, adult.CNhs10470.859-1F848.74
skin, adult.CNhs10492.30-1C371.73
skin, neonate N00.CNhs11124.650-25G439.07
skin, neonate N03.CNhs11215.662-22H329.25
skin, neonate N06.CNhs11097.693-20I530.92
skin, neonate N10.CNhs11108.762-6C439.07
small intestine, neonate N16.CNhs11114.790-21I123.32
spinal cord, adult.CNhs10505.24-13C915.20
spleen, adult.CNhs10465.25-2G228.88
spleen, embryo E16.CNhs11035.461-43C117.54
spleen, embryo E18.CNhs11011.1271-21F215.37
spleen, neonate N10.CNhs11116.752-24D120.34
spleen, neonate N20.CNhs11112.824-19H123.37
spleen, neonate N25.CNhs11099.1354-25G321.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.99
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G87.93
stomach, embryo E16.CNhs11022.459-17D46.59
stomach, embryo E17.CNhs11006.1035-18D514.22
stomach, embryo E18.CNhs10999.1286-20C614.19
stomach, neonate N03.CNhs11193.1340-24B820.90
stomach, neonate N07.CNhs11210.718-18A928.18
stomach, neonate N25.CNhs11104.1355-25E429.84
stomach, neonate N30.CNhs11134.1386-42I139.01
submandibular gland, adult.CNhs10469.59-29C165.86
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F518.54
testis, embryo E15.CNhs11034.443-27C510.92
testis, embryo E16.CNhs11033.470-26G513.81
testis, embryo E17.CNhs11029.486-18I59.43
testis, embryo E18.CNhs11027.503-18G510.48
testis, neonate N00.CNhs11189.1300-22B713.85
testis, neonate N07.CNhs11222.726-26I422.00
testis, neonate N10.CNhs11204.763-44D933.35
testis, neonate N20.CNhs11110.839-18H330.92
testis, neonate N30.CNhs11130.1391-42E236.87
thymus, adult.CNhs10471.38-12B530.65
thymus, embryo E14.CNhs11041.402-44I47.50
thymus, embryo E15.CNhs11005.430-45I27.60
thymus, embryo E16.CNhs11002.456-26C510.13
thymus, embryo E17.CNhs10581.478-18C115.93
thymus, embryo E18.CNhs10595.1273-19G416.29
thymus, neonate N02.CNhs11181.1541-43F818.15
thymus, neonate N03.CNhs11137.2104-43C721.27
thymus, neonate N06.CNhs11197.681-26C416.15
thymus, neonate N07.CNhs11211.713-19D320.80
thymus, neonate N10.CNhs11194.748-24E421.07
thymus, neonate N20.CNhs11186.820-7A224.17
thymus, neonate N25.CNhs11125.1362-25G724.25
thymus, neonate N30.CNhs11132.1393-42G230.27
tongue, adult.CNhs10499.32-1B468.47
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.62
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G520.48
urinary bladder, adult.CNhs10481.879-12E435.74
uterus, adult pregnant day19.CNhs10497.590-15F528.72
uterus, adult.CNhs10509.92-27E512.64
vagina, adult.CNhs10502.89-27D527.22
vesicular gland, adult.CNhs10491.51-27F838.62
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D211.91
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F29.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G527.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G525.55
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G528.24
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G527.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G524.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G521.31
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G525.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G525.96
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G526.62
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G537.91
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.93
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G524.56
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.53
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.87
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G520.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G524.13
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G526.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G524.17
whole body, embryo E17.5.CNhs10513.490-9F923.34
whole body, embryo E17.CNhs10517.475-3I519.24
whole body, embryo E18.CNhs10516.493-3B327.14
whole body, neonate N00.CNhs10525.657-19C229.87
whole body, neonate N01.CNhs10576.659-23C646.10
whole body, neonate N06.CNhs10515.692-21D151.40
whole body, neonate N10.CNhs10518.761-6B447.53





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:109416309..109416368,%2B&oldid=957231"