Personal tools

FFCP PHASE1:Mm9::chr7:133646781..133646798,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:133646781..133646798,-
|short_description=p7@Atxn2l
|description=CAGE_peak_7_at_Atxn2l_5end
|association_with_transcript=17bp_to_ENSMUST00000040202,ENSMUST00000166682,NM_183020,uc009jrs.1,uc009jru.1_5end
|EntrezGene=233871
|EntrezGene=233871
|HGNC=
|HGNC=
|UniProt=Q7TQH0,E9Q5Q0
|UniProt=Q7TQH0,E9Q5Q0
|association_with_transcript=17bp_to_ENSMUST00000040202,ENSMUST00000166682,NM_183020,uc009jrs.1,uc009jru.1_5end
|description=CAGE_peak_7_at_Atxn2l_5end
|id=chr7:133646781..133646798,-
|ontology_enrichment_disease=
|phase1_expression=1.92178616525753,1.39590163055744,1.81999695755814,0.30246421130683,0.500895729946347,0.671517087647559,0.934450562382103,2.58246646883153,6.19470377467334,5.85161315804984,4.62288514208863,4.94587385771086,0.684802919724823,1.74840804837995,0.999329285446988,1.41732687172878,1.39912375625629,2.20823515750766,1.37114433605739,1.27316895539409,11.5658874605455,1.39007331681239,1.04479915655574,0.47997726838022,0.45881856213434,1.14846392823004,0.430761996159075,0.430942465371778,0.950117097281869,0.756090389279792,1.10865255327652,1.27006134691926,1.84519436275371,0,0,0.332469290716985,0.816677425049476,0,0.7813353445238,0.523523743973798,0,0,0,0.503587271902309,0.608261587317087,0.734187008646726,0.782391344348039,1.52617609466313,0.659058548203415,1.94429899074283,2.79972843250725,1.43752564364972,2.34895648480831,2.17608642603403,2.01656279485478,0.514518872071894,2.0057340795713,2.06268836910977,1.01158230429799,1.05798195854407,0.633831403506179,2.03306719241479,4.4464739805557,0,0.988866362566974,0.7104801149461,1.79760066311043,3.07374644257244,0.518448061542388,0.675029691658453,0.210324961351382,0.856952953211411,0.883474163806454,0.489963196859816,0.670918297127655,0,1.10115880999389,1.53224805702225,1.99688493233117,1.45074916503213,1.00636407962651,0.52091337055676,1.67509799400829,1.12552522006336,0.61119299110724,0.589257170947335,1.42371680799103,0.559198337475902,0.832988126665025,0.906858721281426,0.579728977403356,0,1.3599426674155,0.539703191637817,1.94932925234301,0.448026887097336,1.12355536105401,0.852151612890289,0.779358013808606,1.06001872353102,0.14084341977668,0,0,0,0.649473123033642,1.26679932737549,2.02209778005913,2.05530983494308,2.07150306917737,1.1875371125186,1.21439728736295,0.608930956624282,1.15307748628029,1.3565037649736,1.99900802130698,0.376999773989026,1.73036477414062,0.433798070759735,1.76922110389975,0.970601099684455,1.98757366614354,2.90925151881133,0,2.63502717310392,1.46612694769419,0.766371165625774,1.91704199209472,1.19980546198682,1.14363204365758,1.79748767285787,2.74500361691176,1.00523481690292,1.04294592115366,0.767146371990992,2.28566849015516,1.94689515681309,0.712875546952214,1.24406970610093,1.0108910337347,1.26265113531884,1.69156575851515,1.60931473103431,0.720248519221397,1.35634336052144,1.76894897793452,0.512454881139399,0.937017245597288,2.06962696591213,2.58681591519411,2.08016688184601,1.23165786914764,1.09597866213787,1.11218899690239,1.0447564995665,0.61734640922383,0.398068533636986,0.702213187313235,2.31613116403244,1.70498099637356,1.03562886267751,0.703578179943289,0.540186184383045,1.89395788468168,0.393528463494808,0.617068451549513,0.232533944750408,0.536546802799238,0.350296027101508,1.15191894939436,0.164167464079095,0.486412857275134,0.146199987425332,0.439100230582101,1.20785776884335,0.420579897128254,1.02904612379284,1.32167513193519,0,1.49301775374664,0.928946687441754,0.644337306610467,1.00841762311671,1.77902435075896,0.760902504450237,0.474529061544512,0.988193728344065,1.50801125280162,1.98956472041151,1.75467678407208,0.898819408654221,1.51296634912286,0.995706366271836,1.13800740571849,1.82797620175566,1.1270773567308,1.01825663922657,1.35766741017338,1.05203729835478,0.822074982615345,0.295220295959204,0.31399745568275,0.123397163921801,0.296452627087149,1.66845105716094,0.589676985339609,1.34917267430912,1.01430060694251,1.20588579876208,0.25462585178142,0,4.53978634970099,1.37280706594041,2.87536413054709,0.372140947668503,0.624075346229121,1.01031551178845,0.538192240565737,1.92977408545347,0.554259570499814,1.13694847062291,1.46668478797823,1.52770577197669,0.938760993154008,1.17254380209271,0.476087281772027,0.975668239288994,0.157635144106191,1.32878813789265,0.478364305972461,0.491589944147214,1.03610989119537,0.723245292907558,3.01582567878545,2.17562273527484,0,1.65562047782839,1.12385412991454,1.05490517932983,0.491804836130026,0.252470927204373,1.57754109708128,0.390438744296638,0.861693590931196,1.19484398976276,0.891194696329576,1.41538265394416,0.809621403349789,1.75353514746787,1.58115111178609,1.60660658210904,1.56134093729095,0.534196811001766,1.46598263418218,0.824850614862677,0,0.971122544619926,1.51161778482376,0.565815239267694,0.885905678642318,0.614870295887855,0.258428293168221,1.09060118843252,0,0.316036757935816,1.05418608574999,0,0.340439605753788,1.98067203434441,1.4229455216103,1.28602221018955,0.886701168211368,1.07021290561242,1.48094118541909,2.13125464380219,0.938686832254841,0.63549621259146,0.661585194164886,0.8244312647074,0.968786560175433,0.422190474497091,0.716234064018819,1.14898629821543,2.04036585640896,0.927126510052548,2.39219233116994,0.82554747185289,1.11116716421827,1.31857919903284,3.14396723758358,2.51655990527175,2.03974115992626,1.39951452323658,1.93479963326193,1.90934123603023,1.42351197111511,1.21991680276109,0.540026704109006,1.25452977608681,0.436725127492355,0,0.991841468704031,0,1.16653475962614,0.621339313086926,69.8979243968396,1.94371509857172,0.330916980914195,0.777804753376191,0.645799117388655,0.337912250981556,1.40828686374905,1.69265700297135,1.67774951081137,31.1643515865548,42.3404109199062,2.8441000856536,2.02725215290164,1.43795340030758,1.81889152168913,3.04345382634718,0.596044064343795,1.80293174279953,1.62458479892035,1.61546319917036,1.600342939755,1.51239277705261,2.72882066071307,1.6356013078856,1.28564592399726,0.226730383615211,1.77588762699252,1.88399098879899,1.34307693091263,0.19318959403219,1.12609485270709,0.73260649706906,1.2862102744744,1.00314420807073,1.12950368523413,0.920650473014354,0,0.171853182343688,0,0,0.675022500231806,0.900642406448441,1.35942722695261,1.55328093525546,1.3492355185943,0.399024873401031,2.04880326904961,1.94485373654635,1.46729213839588,0.551530525350042,0.888986911206461,0.206035057238894,0.64183841918363,0.252697211763798,0,0.188626341386076,0.842773567228942,0.768301828858431,0.574354689556133,0.476293691283074,0.695305955669133,0.578727661391115,2.06042950401653,1.17759136107518,0.685738504770831,1.24233064311536,0.715308569841963,1.0174249164263,1.31753132581463,0.507687647350059,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,1.06771516311757,1.0835493061312,0.818462086339379,0.619747364743864,1.15743966588685,0.499621155875892,0.701794825336225,0.859484216193193,1.3390183244819,2.20591419119516,0.231867835620421
|phase1_expression=1.92178616525753,1.39590163055744,1.81999695755814,0.30246421130683,0.500895729946347,0.671517087647559,0.934450562382103,2.58246646883153,6.19470377467334,5.85161315804984,4.62288514208863,4.94587385771086,0.684802919724823,1.74840804837995,0.999329285446988,1.41732687172878,1.39912375625629,2.20823515750766,1.37114433605739,1.27316895539409,11.5658874605455,1.39007331681239,1.04479915655574,0.47997726838022,0.45881856213434,1.14846392823004,0.430761996159075,0.430942465371778,0.950117097281869,0.756090389279792,1.10865255327652,1.27006134691926,1.84519436275371,0,0,0.332469290716985,0.816677425049476,0,0.7813353445238,0.523523743973798,0,0,0,0.503587271902309,0.608261587317087,0.734187008646726,0.782391344348039,1.52617609466313,0.659058548203415,1.94429899074283,2.79972843250725,1.43752564364972,2.34895648480831,2.17608642603403,2.01656279485478,0.514518872071894,2.0057340795713,2.06268836910977,1.01158230429799,1.05798195854407,0.633831403506179,2.03306719241479,4.4464739805557,0,0.988866362566974,0.7104801149461,1.79760066311043,3.07374644257244,0.518448061542388,0.675029691658453,0.210324961351382,0.856952953211411,0.883474163806454,0.489963196859816,0.670918297127655,0,1.10115880999389,1.53224805702225,1.99688493233117,1.45074916503213,1.00636407962651,0.52091337055676,1.67509799400829,1.12552522006336,0.61119299110724,0.589257170947335,1.42371680799103,0.559198337475902,0.832988126665025,0.906858721281426,0.579728977403356,0,1.3599426674155,0.539703191637817,1.94932925234301,0.448026887097336,1.12355536105401,0.852151612890289,0.779358013808606,1.06001872353102,0.14084341977668,0,0,0,0.649473123033642,1.26679932737549,2.02209778005913,2.05530983494308,2.07150306917737,1.1875371125186,1.21439728736295,0.608930956624282,1.15307748628029,1.3565037649736,1.99900802130698,0.376999773989026,1.73036477414062,0.433798070759735,1.76922110389975,0.970601099684455,1.98757366614354,2.90925151881133,0,2.63502717310392,1.46612694769419,0.766371165625774,1.91704199209472,1.19980546198682,1.14363204365758,1.79748767285787,2.74500361691176,1.00523481690292,1.04294592115366,0.767146371990992,2.28566849015516,1.94689515681309,0.712875546952214,1.24406970610093,1.0108910337347,1.26265113531884,1.69156575851515,1.60931473103431,0.720248519221397,1.35634336052144,1.76894897793452,0.512454881139399,0.937017245597288,2.06962696591213,2.58681591519411,2.08016688184601,1.23165786914764,1.09597866213787,1.11218899690239,1.0447564995665,0.61734640922383,0.398068533636986,0.702213187313235,2.31613116403244,1.70498099637356,1.03562886267751,0.703578179943289,0.540186184383045,1.89395788468168,0.393528463494808,0.617068451549513,0.232533944750408,0.536546802799238,0.350296027101508,1.15191894939436,0.164167464079095,0.486412857275134,0.146199987425332,0.439100230582101,1.20785776884335,0.420579897128254,1.02904612379284,1.32167513193519,0,1.49301775374664,0.928946687441754,0.644337306610467,1.00841762311671,1.77902435075896,0.760902504450237,0.474529061544512,0.988193728344065,1.50801125280162,1.98956472041151,1.75467678407208,0.898819408654221,1.51296634912286,0.995706366271836,1.13800740571849,1.82797620175566,1.1270773567308,1.01825663922657,1.35766741017338,1.05203729835478,0.822074982615345,0.295220295959204,0.31399745568275,0.123397163921801,0.296452627087149,1.66845105716094,0.589676985339609,1.34917267430912,1.01430060694251,1.20588579876208,0.25462585178142,0,4.53978634970099,1.37280706594041,2.87536413054709,0.372140947668503,0.624075346229121,1.01031551178845,0.538192240565737,1.92977408545347,0.554259570499814,1.13694847062291,1.46668478797823,1.52770577197669,0.938760993154008,1.17254380209271,0.476087281772027,0.975668239288994,0.157635144106191,1.32878813789265,0.478364305972461,0.491589944147214,1.03610989119537,0.723245292907558,3.01582567878545,2.17562273527484,0,1.65562047782839,1.12385412991454,1.05490517932983,0.491804836130026,0.252470927204373,1.57754109708128,0.390438744296638,0.861693590931196,1.19484398976276,0.891194696329576,1.41538265394416,0.809621403349789,1.75353514746787,1.58115111178609,1.60660658210904,1.56134093729095,0.534196811001766,1.46598263418218,0.824850614862677,0,0.971122544619926,1.51161778482376,0.565815239267694,0.885905678642318,0.614870295887855,0.258428293168221,1.09060118843252,0,0.316036757935816,1.05418608574999,0,0.340439605753788,1.98067203434441,1.4229455216103,1.28602221018955,0.886701168211368,1.07021290561242,1.48094118541909,2.13125464380219,0.938686832254841,0.63549621259146,0.661585194164886,0.8244312647074,0.968786560175433,0.422190474497091,0.716234064018819,1.14898629821543,2.04036585640896,0.927126510052548,2.39219233116994,0.82554747185289,1.11116716421827,1.31857919903284,3.14396723758358,2.51655990527175,2.03974115992626,1.39951452323658,1.93479963326193,1.90934123603023,1.42351197111511,1.21991680276109,0.540026704109006,1.25452977608681,0.436725127492355,0,0.991841468704031,0,1.16653475962614,0.621339313086926,69.8979243968396,1.94371509857172,0.330916980914195,0.777804753376191,0.645799117388655,0.337912250981556,1.40828686374905,1.69265700297135,1.67774951081137,31.1643515865548,42.3404109199062,2.8441000856536,2.02725215290164,1.43795340030758,1.81889152168913,3.04345382634718,0.596044064343795,1.80293174279953,1.62458479892035,1.61546319917036,1.600342939755,1.51239277705261,2.72882066071307,1.6356013078856,1.28564592399726,0.226730383615211,1.77588762699252,1.88399098879899,1.34307693091263,0.19318959403219,1.12609485270709,0.73260649706906,1.2862102744744,1.00314420807073,1.12950368523413,0.920650473014354,0,0.171853182343688,0,0,0.675022500231806,0.900642406448441,1.35942722695261,1.55328093525546,1.3492355185943,0.399024873401031,2.04880326904961,1.94485373654635,1.46729213839588,0.551530525350042,0.888986911206461,0.206035057238894,0.64183841918363,0.252697211763798,0,0.188626341386076,0.842773567228942,0.768301828858431,0.574354689556133,0.476293691283074,0.695305955669133,0.578727661391115,2.06042950401653,1.17759136107518,0.685738504770831,1.24233064311536,0.715308569841963,1.0174249164263,1.31753132581463,0.507687647350059,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,1.06771516311757,1.0835493061312,0.818462086339379,0.619747364743864,1.15743966588685,0.499621155875892,0.701794825336225,0.859484216193193,1.3390183244819,2.20591419119516,0.231867835620421
|short_description=p7@Atxn2l
}}
}}

Revision as of 21:42, 18 April 2012

Short description:p7@Atxn2l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Atxn2l_5end
Coexpression cluster:NA
Association with transcript: 17bp_to_ENSMUST00000040202, ENSMUST00000166682, NM_183020, uc009jrs.1, uc009jru.1_5end
EntrezGene:Atxn2l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Atxn2l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.75
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.92
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F44.54
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G569.90
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D91.68
testis, neonate N20.CNhs11110.839-18H331.16
testis, neonate N30.CNhs11130.1391-42E242.34
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:133646781..133646798,-&oldid=960565"