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FFCP PHASE1:Mm9::chr5:138526311..138526375,+: Difference between revisions

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|description=CAGE_peak_1_at_Zkscan1_5end
|description=CAGE_peak_1_at_Zkscan1_5end
|id=chr5:138526311..138526375,+
|id=chr5:138526311..138526375,+
|ontology_enrichment_celltype=CL:0000540!3.96e-12!33;CL:0000047!3.96e-12!33;CL:0000031!3.96e-12!33;CL:0000404!3.96e-12!33;CL:0000393!2.19e-08!39;CL:0000211!2.19e-08!39;CL:0000117!1.01e-07!23;CL:0000337!1.01e-07!23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=44.2010818009231,18.8446720125255,17.7449703361919,29.3390284967625,25.5456822272637,23.8388566114883,28.7343547932497,24.5334314538995,22.9485617107217,21.5339364216234,27.0524389796298,24.4102806525729,33.8977445263787,29.8103572248781,16.3223783289675,24.0945568193893,25.8837894907414,26.498821890092,25.7775135178789,19.5219239827094,29.0848052316659,33.9575053107028,37.6127696360067,27.0387194520857,23.3997466688513,15.5042630311055,18.9535278309993,19.39241094173,28.1234660795433,20.9185007700743,16.8515188098032,34.9266870402797,12.3012957516914,15.8481681015439,41.8834848639348,30.4209401006041,31.6462502206672,10.0447591376858,10.9386948233332,13.6116173433188,9.41170380849623,12.294818729252,15.5363312969969,27.0678158647491,30.3117024346349,29.5510270980307,10.9534788208725,8.06693078607652,6.15121311656521,11.0825042472342,12.3188051030319,10.062679505548,24.831825696545,23.9369506863744,19.8295341494054,12.8629718017974,17.7650732762029,18.5641953219879,42.2841403196559,34.9134046319542,33.5930643858275,9.4876468979357,4.4464739805557,6.29929802096979,8.89979726310277,3.5524005747305,3.89480143673926,13.4476406862544,61.2805608743103,45.4970012177798,57.4187144489273,29.136400409188,28.4920417827581,59.8980008161125,49.9354904005011,54.2339084099912,59.4625757396699,46.222816386838,49.0004841087417,49.5892441865529,45.2863835831928,52.6122504262328,34.6186918761712,29.2636557216474,42.7835093775068,50.6761167014708,49.5453449180878,50.3278503728312,24.5352866399516,25.8454735565206,47.5377761470752,28.3939879403858,7.47968467078526,39.9380361811985,43.5350199689938,36.7382047419815,23.7351070022661,16.5317412900716,11.4305842025262,9.89350808628953,51.6895350580417,47.4807966432976,99.3740434855918,21.3320010945999,16.2368280758411,19.5087096415826,16.6823066854878,34.1409800359989,42.7247508017833,35.4776712364931,30.0129615305415,20.7036525252256,27.673859670727,26.6779073778142,39.2746281833254,36.0663117116169,26.9442514830468,28.0522752424629,15.0383793831479,25.5591622916907,26.2801406967868,23.2740121504907,20.5030937339934,43.6243387547205,49.8483162216023,28.6111901833622,20.6082014150183,21.5964983157627,18.5522531526674,34.0024751448948,42.0900554593136,69.2355480141883,42.0654854865309,38.8687495142102,38.6485762880782,49.4835852356661,41.1431029955278,27.2451265636104,36.6447999728828,30.0931853917658,43.9807097213939,37.4740430226561,51.8578933839406,42.0466441761645,50.0748633753773,53.9358762399218,46.663458830745,38.8055056108524,44.6225745370983,43.8726105989341,50.3220215108894,35.7289043856947,43.0973236299677,28.9049298213398,29.01528123352,39.2097505632432,11.2354109970118,16.2129181482271,12.7873574728017,22.5767092063697,22.5145017581852,23.768192112854,35.985199808952,26.1696428224047,28.0766145455028,27.4390054805481,20.3887785063711,27.9069168257535,25.342216886676,29.5501435342371,28.4551521505954,22.8071980383518,26.126463719635,28.3175543584384,46.4740786326721,62.6689089389842,23.1293148088659,26.709507233018,40.3114793511592,37.622340841391,34.9230820182873,32.0676804151115,31.3553041821267,27.3924901602085,23.7264530772256,29.810510805046,34.4329236056369,36.2100779114894,30.4143975905827,29.6610404855893,40.8500914263172,42.6162324764346,33.0022147658362,43.3001862790872,48.4643263394246,47.2471080601129,45.7727869715597,51.9706425387261,60.3276564165415,67.0150071827394,55.4205509280053,46.0271421428316,31.4239784712378,24.1925403288336,20.4421354917731,20.6873143394065,20.2860121388503,19.0529956204409,18.3330613282622,23.3033871335157,37.6153726118082,26.6324570792439,33.0666875012915,37.5862357145188,35.2602570619453,29.299149841865,32.4709318474661,52.1039003072437,38.2439103644872,35.8138768246216,40.7412441105065,35.6464680127895,30.7444225257938,34.506289033014,32.1358915196119,37.855927684413,43.0343943409901,50.7154139295695,42.5744232315491,34.5751594050207,36.6092161555699,37.31945711403,13.5712155545345,11.9659250440116,25.0799779239708,33.1124095565679,40.9404004468869,40.4380318743101,25.4099165333847,20.955086957963,40.0695438658646,34.3586094981042,60.3185513651837,56.3966363168023,57.2592592391753,63.9752959582761,51.8157698143865,47.0531931237212,53.3638500227807,45.9489482483184,35.910841557692,35.2569895261165,40.2330789603333,41.0775606201613,18.5843193675948,42.9721725994317,32.0462970382636,25.838895926558,27.4630760379119,26.4394227231778,31.528251766523,42.8969800783456,40.6407011358582,29.3914184880309,18.9753495434998,20.6271086496374,43.9167091422387,50.2370452347355,25.2249433376371,37.5089811305287,49.1232447189098,43.3436226773031,44.2636865419705,29.5331000641161,13.3762873596315,18.6412222360162,34.843486892684,36.7696344059501,40.6890355273682,34.7402447586178,30.3205753767967,31.1867709515616,31.4799303560239,35.9725085900389,20.1627639341466,31.577190798373,23.5197049759534,28.632005464713,27.8856224550891,18.5310320297283,30.0861821089124,27.9902904647316,32.615193817844,11.4560474161814,43.179863123825,42.9004075637651,31.4295541791442,26.3451252978231,25.3300573945566,35.334458752823,36.9460947092252,27.7461298503071,37.8475722012035,39.1443767244763,30.4394186889463,35.7344545045109,32.4298641295911,42.5848102473464,36.1647505737647,36.4945231060081,50.6983270949657,36.9780452956818,30.6189285723076,27.2990056533387,32.8354207133967,32.2331343040742,29.8006066476541,25.7804502483716,24.9447980117366,25.6008174804498,30.7956099910961,31.7315986732718,29.8332844892646,35.2372910319035,31.3972043418599,29.0379413194101,36.3517895159276,27.3241630258536,37.7512394046468,23.579959895982,7.10355050797007,7.98453323824334,9.40153851638839,32.0694726093436,23.4603094313977,31.5020793739696,25.5098371104088,28.5896099300157,42.9211400388971,43.2705722316746,40.6755814541972,37.979553297955,45.900528824633,49.1006033303305,41.851395014372,47.2837263385431,52.1113770331835,44.0096264989047,53.7618460486035,37.1093132262959,39.2687293234509,31.3607665018099,33.1188796952212,35.1141101139527,30.8922951644245,33.9957844444175,26.6362943961207,26.2805100234349,33.4592675855116,33.5754887667216,34.0855087190372,32.2046516596492,36.7587001315925,30.9590899333998,32.099958286725,35.4952965653217,36.6756451714943,39.7437084362873,28.4581479479895,26.2664193115819,37.4344818217294,32.7029437422739,37.7378615465476,34.6919892355874,32.3782511984807,37.0928293127358,34.7658531445406,30.8628249411756,35.4718704191281,30.240876089298,29.0554040650479,32.071926125495,33.1799370887563,30.9765116643053,27.6039297965582,28.1481080803271,26.3977898255004,25.1474217796248,26.2010654251076
|phase1_expression=44.2010818009231,18.8446720125255,17.7449703361919,29.3390284967625,25.5456822272637,23.8388566114883,28.7343547932497,24.5334314538995,22.9485617107217,21.5339364216234,27.0524389796298,24.4102806525729,33.8977445263787,29.8103572248781,16.3223783289675,24.0945568193893,25.8837894907414,26.498821890092,25.7775135178789,19.5219239827094,29.0848052316659,33.9575053107028,37.6127696360067,27.0387194520857,23.3997466688513,15.5042630311055,18.9535278309993,19.39241094173,28.1234660795433,20.9185007700743,16.8515188098032,34.9266870402797,12.3012957516914,15.8481681015439,41.8834848639348,30.4209401006041,31.6462502206672,10.0447591376858,10.9386948233332,13.6116173433188,9.41170380849623,12.294818729252,15.5363312969969,27.0678158647491,30.3117024346349,29.5510270980307,10.9534788208725,8.06693078607652,6.15121311656521,11.0825042472342,12.3188051030319,10.062679505548,24.831825696545,23.9369506863744,19.8295341494054,12.8629718017974,17.7650732762029,18.5641953219879,42.2841403196559,34.9134046319542,33.5930643858275,9.4876468979357,4.4464739805557,6.29929802096979,8.89979726310277,3.5524005747305,3.89480143673926,13.4476406862544,61.2805608743103,45.4970012177798,57.4187144489273,29.136400409188,28.4920417827581,59.8980008161125,49.9354904005011,54.2339084099912,59.4625757396699,46.222816386838,49.0004841087417,49.5892441865529,45.2863835831928,52.6122504262328,34.6186918761712,29.2636557216474,42.7835093775068,50.6761167014708,49.5453449180878,50.3278503728312,24.5352866399516,25.8454735565206,47.5377761470752,28.3939879403858,7.47968467078526,39.9380361811985,43.5350199689938,36.7382047419815,23.7351070022661,16.5317412900716,11.4305842025262,9.89350808628953,51.6895350580417,47.4807966432976,99.3740434855918,21.3320010945999,16.2368280758411,19.5087096415826,16.6823066854878,34.1409800359989,42.7247508017833,35.4776712364931,30.0129615305415,20.7036525252256,27.673859670727,26.6779073778142,39.2746281833254,36.0663117116169,26.9442514830468,28.0522752424629,15.0383793831479,25.5591622916907,26.2801406967868,23.2740121504907,20.5030937339934,43.6243387547205,49.8483162216023,28.6111901833622,20.6082014150183,21.5964983157627,18.5522531526674,34.0024751448948,42.0900554593136,69.2355480141883,42.0654854865309,38.8687495142102,38.6485762880782,49.4835852356661,41.1431029955278,27.2451265636104,36.6447999728828,30.0931853917658,43.9807097213939,37.4740430226561,51.8578933839406,42.0466441761645,50.0748633753773,53.9358762399218,46.663458830745,38.8055056108524,44.6225745370983,43.8726105989341,50.3220215108894,35.7289043856947,43.0973236299677,28.9049298213398,29.01528123352,39.2097505632432,11.2354109970118,16.2129181482271,12.7873574728017,22.5767092063697,22.5145017581852,23.768192112854,35.985199808952,26.1696428224047,28.0766145455028,27.4390054805481,20.3887785063711,27.9069168257535,25.342216886676,29.5501435342371,28.4551521505954,22.8071980383518,26.126463719635,28.3175543584384,46.4740786326721,62.6689089389842,23.1293148088659,26.709507233018,40.3114793511592,37.622340841391,34.9230820182873,32.0676804151115,31.3553041821267,27.3924901602085,23.7264530772256,29.810510805046,34.4329236056369,36.2100779114894,30.4143975905827,29.6610404855893,40.8500914263172,42.6162324764346,33.0022147658362,43.3001862790872,48.4643263394246,47.2471080601129,45.7727869715597,51.9706425387261,60.3276564165415,67.0150071827394,55.4205509280053,46.0271421428316,31.4239784712378,24.1925403288336,20.4421354917731,20.6873143394065,20.2860121388503,19.0529956204409,18.3330613282622,23.3033871335157,37.6153726118082,26.6324570792439,33.0666875012915,37.5862357145188,35.2602570619453,29.299149841865,32.4709318474661,52.1039003072437,38.2439103644872,35.8138768246216,40.7412441105065,35.6464680127895,30.7444225257938,34.506289033014,32.1358915196119,37.855927684413,43.0343943409901,50.7154139295695,42.5744232315491,34.5751594050207,36.6092161555699,37.31945711403,13.5712155545345,11.9659250440116,25.0799779239708,33.1124095565679,40.9404004468869,40.4380318743101,25.4099165333847,20.955086957963,40.0695438658646,34.3586094981042,60.3185513651837,56.3966363168023,57.2592592391753,63.9752959582761,51.8157698143865,47.0531931237212,53.3638500227807,45.9489482483184,35.910841557692,35.2569895261165,40.2330789603333,41.0775606201613,18.5843193675948,42.9721725994317,32.0462970382636,25.838895926558,27.4630760379119,26.4394227231778,31.528251766523,42.8969800783456,40.6407011358582,29.3914184880309,18.9753495434998,20.6271086496374,43.9167091422387,50.2370452347355,25.2249433376371,37.5089811305287,49.1232447189098,43.3436226773031,44.2636865419705,29.5331000641161,13.3762873596315,18.6412222360162,34.843486892684,36.7696344059501,40.6890355273682,34.7402447586178,30.3205753767967,31.1867709515616,31.4799303560239,35.9725085900389,20.1627639341466,31.577190798373,23.5197049759534,28.632005464713,27.8856224550891,18.5310320297283,30.0861821089124,27.9902904647316,32.615193817844,11.4560474161814,43.179863123825,42.9004075637651,31.4295541791442,26.3451252978231,25.3300573945566,35.334458752823,36.9460947092252,27.7461298503071,37.8475722012035,39.1443767244763,30.4394186889463,35.7344545045109,32.4298641295911,42.5848102473464,36.1647505737647,36.4945231060081,50.6983270949657,36.9780452956818,30.6189285723076,27.2990056533387,32.8354207133967,32.2331343040742,29.8006066476541,25.7804502483716,24.9447980117366,25.6008174804498,30.7956099910961,31.7315986732718,29.8332844892646,35.2372910319035,31.3972043418599,29.0379413194101,36.3517895159276,27.3241630258536,37.7512394046468,23.579959895982,7.10355050797007,7.98453323824334,9.40153851638839,32.0694726093436,23.4603094313977,31.5020793739696,25.5098371104088,28.5896099300157,42.9211400388971,43.2705722316746,40.6755814541972,37.979553297955,45.900528824633,49.1006033303305,41.851395014372,47.2837263385431,52.1113770331835,44.0096264989047,53.7618460486035,37.1093132262959,39.2687293234509,31.3607665018099,33.1188796952212,35.1141101139527,30.8922951644245,33.9957844444175,26.6362943961207,26.2805100234349,33.4592675855116,33.5754887667216,34.0855087190372,32.2046516596492,36.7587001315925,30.9590899333998,32.099958286725,35.4952965653217,36.6756451714943,39.7437084362873,28.4581479479895,26.2664193115819,37.4344818217294,32.7029437422739,37.7378615465476,34.6919892355874,32.3782511984807,37.0928293127358,34.7658531445406,30.8628249411756,35.4718704191281,30.240876089298,29.0554040650479,32.071926125495,33.1799370887563,30.9765116643053,27.6039297965582,28.1481080803271,26.3977898255004,25.1474217796248,26.2010654251076
|short_description=p1@Zkscan1
|short_description=p1@Zkscan1
}}
}}

Revision as of 22:47, 18 April 2012

Short description:p1@Zkscan1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zkscan1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000019660, ENSMUST00000066617, ENSMUST00000110963, NM_029869, NM_133906, uc009aej.1, uc009aek.1_5end
EntrezGene:Zkscan1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zkscan1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G744.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I518.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I617.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I329.34
CD326+ enterocyte, pool2.CNhs13197.11849-124I425.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I828.73
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E924.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E722.95
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F221.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E627.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F124.41
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E433.90
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E829.81
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A324.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A226.50
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A425.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A329.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H233.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I937.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D127.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D223.40
GP2+ M cell, pool1.CNhs13228.11845-124H915.50
GP2+ M cell, pool2.CNhs13231.11846-124I118.95
GP2+ M cell, pool3.CNhs13240.11847-124I219.39
Ileum epithelium, pool1.CNhs13199.10252-104B928.12
Ileum epithelium, pool2.CNhs13232.10253-104C120.92
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I334.93
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F541.88
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F630.42
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F731.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D827.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D930.31
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B329.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A224.83
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.94
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.83
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.77
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.56
Mouse Granule cells, donor1.CNhs12131.11713-123C342.28
Mouse Granule cells, donor2.CNhs12357.11731-123E334.91
Mouse Granule cells, donor3.CNhs12108.11636-122C733.59
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D561.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F545.50
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D957.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D528.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D259.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F249.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D654.23
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D359.46
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F346.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D749.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D449.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F445.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D852.61
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.62
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E529.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I642.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D650.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F649.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E150.33
Mouse Schwann, donor1.CNhs12507.11728-123D924.54
Mouse Schwann, donor2.CNhs12573.11746-123F925.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G347.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F728.39
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C839.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F443.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F636.74
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A723.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G651.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H147.48
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I899.37
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.68
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B634.14
accessory axillary lymph node, adult.CNhs10475.1063-29H942.72
adrenal gland, adult.CNhs10508.49-24D735.48
adrenal gland, embryo E14.CNhs11038.406-44C530.01
adrenal gland, embryo E16.CNhs11004.1254-43D620.70
adrenal gland, embryo E17.CNhs11043.1263-45I127.67
adrenal gland, embryo E18.CNhs11026.1262-18F526.68
adrenal gland, neonate N00.CNhs11191.1311-23C139.27
adrenal gland, neonate N25.CNhs11223.1377-27I336.07
amnion, adult pregnant day17.5.CNhs10488.583-22A826.94
aorta, adult.CNhs10498.46-23H128.05
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F525.56
bone (os femoris), neonate N16.CNhs11225.1525-43A626.28
bone (os femoris), neonate N20.CNhs11195.1350-25C323.27
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B243.62
cerebellum, neonate N30.CNhs11135.1395-42I249.85
colon, adult.CNhs10468.36-18H728.61
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C720.61
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D121.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D418.55
corpora quadrigemina, adult.CNhs10501.16-22A434.00
corpus striatum, adult.CNhs10487.19-21D842.09
corpus striatum, neonate N00.CNhs11226.630-43F169.24
cortex, adult.CNhs10473.12-14D542.07
cortex, neonate N30.CNhs11107.1392-42F238.87
diencephalon, adult.CNhs10482.20-12F238.65
diencephalon, neonate N30.CNhs11201.1388-42B249.48
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B141.14
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.25
epididymis, adult.CNhs10490.58-23B236.64
eyeball, adult.CNhs10484.31-12G430.09
eyeball, embryo E12.CNhs11016.345-16C643.98
eyeball, embryo E14.CNhs10521.399-16E237.47
eyeball, embryo E15.CNhs10593.426-16C951.86
eyeball, embryo E17.CNhs11023.1261-18D442.05
eyeball, neonate N00.CNhs11207.633-15C650.07
eyeball, neonate N01.CNhs11140.1532-43E753.94
eyeball, neonate N02.CNhs11205.1551-44G846.66
eyeball, neonate N16.CNhs11188.777-19A238.81
forelimb, embryo E11.CNhs10596.335-25E244.62
forelimb, embryo E12.CNhs10600.359-14H243.87
forelimb, embryo E13.CNhs10589.384-1E250.32
forelimb, embryo E14.CNhs10577.413-26A835.73
forelimb, embryo E15.CNhs11007.437-20E743.10
forelimb, embryo E17.CNhs10598.1517-43C428.90
forelimb, embryo E18.CNhs11008.1520-43B529.02
gonad, embryo E13.CNhs11044.1564-45I639.21
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.24
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D216.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.79
heart, embryo E11.CNhs10586.331-24E922.58
heart, embryo E12.CNhs11015.353-12F522.51
heart, embryo E13.CNhs11013.376-3I923.77
heart, embryo E14.CNhs10597.403-26D435.99
heart, embryo E15.CNhs11017.431-16C826.17
heart, embryo E16.CNhs11021.457-17C628.08
heart, embryo E17.CNhs11025.479-18E527.44
heart, embryo E18.CNhs11030.1283-20G320.39
heart, neonate N00.CNhs11213.639-21E327.91
heart, neonate N03.CNhs11221.1349-25I225.34
heart, neonate N10.CNhs11118.749-24G129.55
heart, neonate N16.CNhs11209.782-15G128.46
heart, neonate N20.CNhs11127.821-26I622.81
heart, neonate N25.CNhs11196.1351-25D326.13
heart, neonate N30.CNhs11202.1390-42D228.32
hippocampus, adult.CNhs10478.13-16E846.47
hippocampus, neonate N00.CNhs11228.627-43G162.67
intestinal mucosa, adult.CNhs10506.860-29I323.13
intestine, adult.CNhs10496.178-9A326.71
intestine, embryo E12.CNhs11019.1251-16I540.31
intestine, embryo E13.CNhs11010.381-16D537.62
intestine, embryo E15.CNhs10602.976-16D834.92
intestine, embryo E16.CNhs10585.463-22H432.07
intestine, embryo E17.CNhs10582.482-18D331.36
intestine, embryo E18.CNhs10526.1289-20F727.39
intestine, neonate N00.CNhs11126.644-26D123.73
intestine, neonate N01.CNhs11192.1322-23E929.81
intestine, neonate N06.CNhs11102.688-20B834.43
intestine, neonate N07.CNhs11095.720-20F236.21
intestine, neonate N10.CNhs11098.755-23A530.41
intestine, neonate N20.CNhs11187.827-18D129.66
intestine, neonate N25.CNhs11121.1352-25E340.85
intestine, neonate N30.CNhs11131.1384-42G142.62
kidney, embryo E14.CNhs10606.411-4I933.00
kidney, embryo E15.CNhs10997.434-16F843.30
kidney, embryo E16.CNhs10584.464-22A548.46
kidney, embryo E17.CNhs11028.483-18I247.25
kidney, embryo E18.CNhs11001.1288-20C745.77
kidney, neonate N00.CNhs11214.646-21G751.97
kidney, neonate N10.CNhs11206.758-6D560.33
kidney, neonate N20.CNhs11113.832-19I167.02
kidney, neonate N25.CNhs11122.1353-25F355.42
kidney, neonate N30.CNhs11203.1385-42H146.03
liver, adult pregnant day01.CNhs10466.508-5B231.42
liver, embryo E12.CNhs10601.355-15F824.19
liver, embryo E13.CNhs10524.378-3H620.44
liver, embryo E14.CNhs10594.409-16E120.69
liver, embryo E15.CNhs10520.433-16D720.29
liver, embryo E16.CNhs10523.462-17F519.05
liver, embryo E17.CNhs10510.481-18A318.33
liver, embryo E18.CNhs10579.499-43G423.30
liver, neonate N00.CNhs11117.641-24F437.62
liver, neonate N03.CNhs11123.1345-25G226.63
liver, neonate N06.CNhs11101.684-20A833.07
liver, neonate N07.CNhs11103.716-20H237.59
liver, neonate N10.CNhs11115.751-24B935.26
liver, neonate N20.CNhs11220.823-25A329.30
liver, neonate N25.CNhs11198.1368-26H132.47
liver, neonate N30.CNhs11106.1382-42D152.10
lung, adult.CNhs10474.28-22B138.24
lung, embryo E12.CNhs10522.354-16G235.81
lung, embryo E14.CNhs10604.404-26F840.74
lung, embryo E15.CNhs11020.432-17C535.65
lung, embryo E16.CNhs10998.458-17B630.74
lung, embryo E17.CNhs10605.480-44A634.51
lung, embryo E18.CNhs10583.1287-20I632.14
lung, neonate N00.CNhs11224.640-42C637.86
lung, neonate N06.CNhs11212.683-20E543.03
lung, neonate N07.CNhs11111.715-19A350.72
lung, neonate N10.CNhs11219.750-23E642.57
lung, neonate N20.CNhs11109.822-18A434.58
lung, neonate N25.CNhs11119.1359-25C736.61
lung, neonate N30.CNhs11133.1394-42H237.32
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.97
mammary gland, adult lactating day02.CNhs10480.595-22B625.08
mammary gland, adult pregnant day19.CNhs10476.588-5H233.11
medulla oblongata, adult.CNhs10477.17-12C240.94
medulla oblongata, neonate N30.CNhs11200.1396-42A340.44
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C725.41
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C220.96
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E140.07
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E234.36
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E360.32
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D756.40
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D857.26
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D963.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D451.82
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D547.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D653.36
olfactory brain, adult.CNhs10489.18-22I945.95
ovary, adult.CNhs10507.91-2I735.91
ovary, embryo E18.CNhs11040.505-44H735.26
ovary, neonate N00.CNhs11217.1299-22I440.23
oviduct, adult pregnant day01.CNhs10500.988-6G641.08
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F442.97
pancreas, embryo E15.CNhs11042.1556-45F232.05
pancreas, embryo E16.CNhs11003.460-26E525.84
pancreas, embryo E17.CNhs10599.1558-45G327.46
pancreas, embryo E18.CNhs10580.1535-43I726.44
pancreas, neonate N00.CNhs11105.645-26G931.53
pancreas, neonate N01.CNhs11138.1531-43D742.90
pancreas, neonate N02.CNhs11139.1539-43D840.64
pancreas, neonate N16.CNhs11136.787-43B629.39
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H520.63
pituitary gland, adult.CNhs10493.21-1G843.92
pituitary gland, embryo E12.CNhs11018.346-16E650.24
pituitary gland, embryo E13.CNhs11009.370-44C725.22
pituitary gland, embryo E14.CNhs11037.398-44A537.51
pituitary gland, embryo E15.CNhs10592.427-16B949.12
pituitary gland, embryo E16.CNhs11036.449-43F643.34
pituitary gland, embryo E17.CNhs11039.1265-44F544.26
pituitary gland, neonate N00.CNhs11190.1308-22E929.53
placenta, adult pregnant day10.CNhs10472.539-13I713.38
placenta, adult pregnant day17.CNhs10464.577-18G318.64
prostate, adult.CNhs10470.859-1F834.84
skin, adult.CNhs10492.30-1C336.77
skin, neonate N00.CNhs11124.650-25G440.69
skin, neonate N03.CNhs11215.662-22H334.74
skin, neonate N06.CNhs11097.693-20I530.32
skin, neonate N10.CNhs11108.762-6C431.19
small intestine, neonate N16.CNhs11114.790-21I131.48
spinal cord, adult.CNhs10505.24-13C935.97
spleen, adult.CNhs10465.25-2G220.16
spleen, embryo E16.CNhs11035.461-43C131.58
spleen, embryo E18.CNhs11011.1271-21F223.52
spleen, neonate N10.CNhs11116.752-24D128.63
spleen, neonate N20.CNhs11112.824-19H127.89
spleen, neonate N25.CNhs11099.1354-25G318.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C927.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D332.62
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E343.18
stomach, embryo E15.CNhs10603.1252-16G842.90
stomach, embryo E16.CNhs11022.459-17D431.43
stomach, embryo E17.CNhs11006.1035-18D526.35
stomach, embryo E18.CNhs10999.1286-20C625.33
stomach, neonate N03.CNhs11193.1340-24B835.33
stomach, neonate N07.CNhs11210.718-18A936.95
stomach, neonate N25.CNhs11104.1355-25E427.75
stomach, neonate N30.CNhs11134.1386-42I137.85
submandibular gland, adult.CNhs10469.59-29C139.14
testis, adult.CNhs10504.57-7G530.44
testis, embryo E13.CNhs11031.389-23F535.73
testis, embryo E15.CNhs11034.443-27C532.43
testis, embryo E16.CNhs11033.470-26G542.58
testis, embryo E17.CNhs11029.486-18I536.16
testis, embryo E18.CNhs11027.503-18G536.49
testis, neonate N00.CNhs11189.1300-22B750.70
testis, neonate N07.CNhs11222.726-26I436.98
testis, neonate N10.CNhs11204.763-44D930.62
testis, neonate N20.CNhs11110.839-18H327.30
testis, neonate N30.CNhs11130.1391-42E232.84
thymus, adult.CNhs10471.38-12B532.23
thymus, embryo E14.CNhs11041.402-44I429.80
thymus, embryo E15.CNhs11005.430-45I225.78
thymus, embryo E16.CNhs11002.456-26C524.94
thymus, embryo E17.CNhs10581.478-18C125.60
thymus, embryo E18.CNhs10595.1273-19G430.80
thymus, neonate N02.CNhs11181.1541-43F831.73
thymus, neonate N03.CNhs11137.2104-43C729.83
thymus, neonate N06.CNhs11197.681-26C435.24
thymus, neonate N07.CNhs11211.713-19D331.40
thymus, neonate N10.CNhs11194.748-24E429.04
thymus, neonate N20.CNhs11186.820-7A236.35
thymus, neonate N25.CNhs11125.1362-25G727.32
thymus, neonate N30.CNhs11132.1393-42G237.75
tongue, adult.CNhs10499.32-1B423.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.98
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.40
urinary bladder, adult.CNhs10481.879-12E432.07
uterus, adult pregnant day19.CNhs10497.590-15F523.46
uterus, adult.CNhs10509.92-27E531.50
vagina, adult.CNhs10502.89-27D525.51
vesicular gland, adult.CNhs10491.51-27F828.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A142.92
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A243.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A340.68
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A445.90
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A549.10
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A641.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A747.28
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A852.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A944.01
whole body, embryo E11.CNhs11014.324-5I853.76
whole body, embryo E12.CNhs10587.857-27C937.11
whole body, embryo E13.CNhs10512.372-23H239.27
whole body, embryo E14.5.CNhs10578.420-27D231.36
whole body, embryo E14.CNhs10519.395-14B133.12
whole body, embryo E16.CNhs10514.453-14F235.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G534.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G526.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.28
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G533.46
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G533.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G534.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G532.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G536.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G532.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G535.50
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G536.68
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G539.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G528.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.27
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G537.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G532.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G537.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G534.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G532.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G537.09
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G534.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G535.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G530.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G529.06
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G532.07
whole body, embryo E17.5.CNhs10513.490-9F933.18
whole body, embryo E17.CNhs10517.475-3I530.98
whole body, embryo E18.CNhs10516.493-3B327.60
whole body, neonate N00.CNhs10525.657-19C228.15
whole body, neonate N01.CNhs10576.659-23C626.40
whole body, neonate N06.CNhs10515.692-21D125.15
whole body, neonate N10.CNhs10518.761-6B426.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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