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FFCP PHASE1:Mm9::chr7:87343450..87343514,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:87343450..87343514,+
|short_description=p2@Sema4b
|description=CAGE_peak_2_at_Sema4b_5end
|association_with_transcript=26bp_to_ENSMUST00000123023_5end
|EntrezGene=20352
|EntrezGene=20352
|HGNC=
|HGNC=
|UniProt=
|UniProt=
|association_with_transcript=26bp_to_ENSMUST00000123023_5end
|description=CAGE_peak_2_at_Sema4b_5end
|id=chr7:87343450..87343514,+
|ontology_enrichment_disease=
|phase1_expression=12.4916100741739,21.287499866001,21.8399634906977,2.11724947914781,2.50447864973174,10.7442734023609,12.1478573109673,6.45616617207881,5.63154888606667,14.0438715793196,1.54096171402954,3.27065851880879,2.56801094896809,2.44777126773193,55.9624399850313,59.7302038799987,71.3553115690709,50.1584842919598,47.9900517620086,67.9023442876848,3.91199134694921,12.4113689001107,6.52999472847338,28.7986361028132,27.2997044469932,17.8011908875656,18.9535278309993,16.1603424514417,3.80046838912748,3.2763916868791,13.7472916606289,98.4297543862428,118.092439216237,95.0890086092632,1.1554064790051,0.997407872150954,1.83752420636132,5.4409111995798,7.813353445238,2.61761871986899,5.29408339227913,12.294818729252,5.34061388334269,7.67970589651021,7.29913904780505,16.5192076945513,2.34717403304412,10.247182349881,9.66619204031676,7.38833616482277,7.13930750289349,10.062679505548,37.4155211508752,8.70434570413613,7.73015738027667,1.28629718017973,6.01720223871389,5.67239301505187,11.1274053472779,13.7537654610729,8.87363964908651,12.5372476865579,20.4537803105562,4.49949858640699,3.9554654502679,3.5524005747305,7.49000276296012,8.06858441175265,3.11068836925433,3.51015439662396,2.73422449756797,16.5677570954206,13.0312439161452,1.71487118900936,3.06705507258356,2.75765635983006,5.50579404996943,5.10749352340751,3.37934373163736,12.265424758908,10.9785172322892,7.29278718779464,5.02529398202486,5.6276261003168,5.50073691996516,13.5529149317887,12.8134512719193,11.183966749518,5.75519069332199,16.7013147835996,2.6087803983151,1.72084775396277,1.3599426674155,0,1.29955283489534,0,6.03911006566533,5.45377032249785,3.37721805983729,4.94675404314476,7.18301440861071,5.13305909657271,5.09610479413291,7.11066703153331,16.2368280758411,13.9347926011304,16.1767822404731,7.07940054258172,23.3044095282455,11.4300447079915,8.15381035800839,14.3098774806706,12.4532368518272,8.28974523039424,13.0523464920632,13.571991863605,8.40462890296871,16.4843266888699,27.4229271104461,6.63244084784378,26.5009822152472,27.6378894287077,3.72783522436244,4.9772735491963,3.14170060220183,9.19645398750929,4.07371423320129,3.59941638596045,4.44745794755726,6.14141621559773,8.6925114535539,3.26701315493447,6.60532416730651,7.67146371990992,4.77912502486988,5.51620294430376,6.61955865027056,18.5366386209039,7.07623723614289,2.10441855886474,3.3831315170303,3.21862946206862,5.76198815377118,4.52114453507145,4.96666443804693,4.61209393025459,6.27801554550183,4.13925393182425,7.11374376678379,4.9167580843633,7.5658983390498,4.82230611340665,5.83899223373756,7.3132954969655,7.81972118350185,8.35943920637671,9.83098462238529,3.86021860672073,6.81992398549422,1.65700618028402,2.57978665979206,0.720248245844059,1.18372367792605,1.18058539048442,1.23413690309903,1.39520366850245,1.60964040839772,1.5179494507732,0.987359099480883,1.14917224855367,0.891756905004413,1.02339991197733,0.439100230582101,0.671032093801859,6.30869845692382,5.65975368086064,18.1730330641089,3.17340679996253,4.05247676016945,4.87697010906921,6.57224052742676,6.05050573870028,4.22518283305254,4.94586627892654,2.37264530772256,6.42325923423642,6.53471542880701,7.56034593756373,8.96834800747953,4.49409704327111,3.02593269824572,3.38540164532424,4.1726938209678,6.39791670614481,11.270773567308,5.29493452397817,4.26695471768777,7.43439690837377,3.41477300470989,5.75679577120448,4.23896565171712,6.78684401569903,0,12.1796927172749,16.5109555895091,18.438693215558,19.2717115319078,17.1235783424216,14.5136735515409,15.247895284893,12.1601420081277,10.158772287959,5.75072826109418,14.5134969590716,7.80094182786401,2.77836765741823,1.4351793081753,1.4473305640901,5.17308932466493,3.60033682363921,4.56301934037672,3.56464680127895,4.92849521405854,6.53274404023081,3.57065461329021,5.07347484430277,3.31033802623001,3.5434350343804,3.50800491046472,2.62181303545181,2.59027472798843,2.16973587872267,10.5553898757491,8.15858525728064,11.8023425524569,7.45029215022778,4.81651769963376,5.39173758324135,6.55739781506702,3.02965112645248,13.8823616543153,13.6653560503823,22.4040333642111,19.5954414321093,17.3782965784267,16.1353622549635,27.9319384155677,18.9966307642353,27.6701444562566,5.78378369559253,10.5035663054119,11.3961986347043,11.7278610734575,7.4236555337641,2.65490276679926,6.06951590387454,3.93020624054176,3.39489143560617,6.79194353625777,3.3817866273832,5.16856586336442,3.27180356529755,3.20847640546249,3.16036757935816,1.05418608574999,3.09406629744561,5.44703369206061,2.88097750450096,4.13947788104814,4.28674070063185,6.7389288784064,7.31312152168489,5.43011767986999,9.74287837166718,4.4587624532105,34.9522916925303,1.10264199027481,14.5099902588502,12.9171541356724,9.77069383836125,14.4440536243795,15.2651036762907,3.49777003955821,6.11903496634682,46.4768795770159,9.08102219038179,17.4082855727529,49.352535735229,58.6418236923198,59.4823250336959,9.5187920796559,6.15786390224095,6.90999869022119,4.77335309007557,7.11755985557555,4.67634774391752,7.02034715341708,7.3180903605064,6.11415178489297,8.36158947585888,10.083721598491,3.92633912976044,4.27729411862916,6.21339313086926,1.12738587736838,9.27002585472668,5.95650565645551,7.19469396872976,4.90807329215378,7.09615727061268,8.56707842114004,11.8485990207995,8.59846624290829,2.89900944991207,3.74439008135225,5.37218905067903,5.0681303822541,5.95723551555998,3.63778304337826,3.04345382634718,4.76835251475036,3.72605893511903,2.51072196196781,2.72609414859999,3.27689268616499,3.7305688500631,4.19068887180935,2.5977197242889,4.44132228289962,3.17422537061296,7.76950836809226,6.01082839283487,3.02192309455341,14.1028403643499,4.129014459926,7.3260649706906,15.2201549146137,1.50471631210609,6.7770221114048,4.60325236507177,5.72895513439397,6.18671456437275,5.48066015816514,0,4.72515750162264,5.40385443869065,4.98456649882625,6.73088405277366,1.55681021376265,7.58147259461959,6.31714341290296,6.07766792670735,4.40187641518763,3.12533964365024,4.66718128383392,7.0051919461224,6.09746498224449,9.6024940470243,5.83002389747551,5.09291121742406,5.15028291084353,6.08238947846258,5.80098236451694,4.76293691283074,4.86714168968393,5.98018583437486,7.82963211526283,4.71036544430071,5.82877729055206,6.21165321557681,6.19934093863034,4.94177816549917,5.64656282491984,6.8537832392258,6.21955107767427,8.94437018888666,5.70377278152619,5.61142271657738,6.16902094245706,4.23569274214923,4.50154147486658,4.49316839439301,7.71626443924566,9.99242311751784,7.48581147025307,9.66919743217342,5.54736162999646,10.1472052794977,5.10109238364927
|phase1_expression=12.4916100741739,21.287499866001,21.8399634906977,2.11724947914781,2.50447864973174,10.7442734023609,12.1478573109673,6.45616617207881,5.63154888606667,14.0438715793196,1.54096171402954,3.27065851880879,2.56801094896809,2.44777126773193,55.9624399850313,59.7302038799987,71.3553115690709,50.1584842919598,47.9900517620086,67.9023442876848,3.91199134694921,12.4113689001107,6.52999472847338,28.7986361028132,27.2997044469932,17.8011908875656,18.9535278309993,16.1603424514417,3.80046838912748,3.2763916868791,13.7472916606289,98.4297543862428,118.092439216237,95.0890086092632,1.1554064790051,0.997407872150954,1.83752420636132,5.4409111995798,7.813353445238,2.61761871986899,5.29408339227913,12.294818729252,5.34061388334269,7.67970589651021,7.29913904780505,16.5192076945513,2.34717403304412,10.247182349881,9.66619204031676,7.38833616482277,7.13930750289349,10.062679505548,37.4155211508752,8.70434570413613,7.73015738027667,1.28629718017973,6.01720223871389,5.67239301505187,11.1274053472779,13.7537654610729,8.87363964908651,12.5372476865579,20.4537803105562,4.49949858640699,3.9554654502679,3.5524005747305,7.49000276296012,8.06858441175265,3.11068836925433,3.51015439662396,2.73422449756797,16.5677570954206,13.0312439161452,1.71487118900936,3.06705507258356,2.75765635983006,5.50579404996943,5.10749352340751,3.37934373163736,12.265424758908,10.9785172322892,7.29278718779464,5.02529398202486,5.6276261003168,5.50073691996516,13.5529149317887,12.8134512719193,11.183966749518,5.75519069332199,16.7013147835996,2.6087803983151,1.72084775396277,1.3599426674155,0,1.29955283489534,0,6.03911006566533,5.45377032249785,3.37721805983729,4.94675404314476,7.18301440861071,5.13305909657271,5.09610479413291,7.11066703153331,16.2368280758411,13.9347926011304,16.1767822404731,7.07940054258172,23.3044095282455,11.4300447079915,8.15381035800839,14.3098774806706,12.4532368518272,8.28974523039424,13.0523464920632,13.571991863605,8.40462890296871,16.4843266888699,27.4229271104461,6.63244084784378,26.5009822152472,27.6378894287077,3.72783522436244,4.9772735491963,3.14170060220183,9.19645398750929,4.07371423320129,3.59941638596045,4.44745794755726,6.14141621559773,8.6925114535539,3.26701315493447,6.60532416730651,7.67146371990992,4.77912502486988,5.51620294430376,6.61955865027056,18.5366386209039,7.07623723614289,2.10441855886474,3.3831315170303,3.21862946206862,5.76198815377118,4.52114453507145,4.96666443804693,4.61209393025459,6.27801554550183,4.13925393182425,7.11374376678379,4.9167580843633,7.5658983390498,4.82230611340665,5.83899223373756,7.3132954969655,7.81972118350185,8.35943920637671,9.83098462238529,3.86021860672073,6.81992398549422,1.65700618028402,2.57978665979206,0.720248245844059,1.18372367792605,1.18058539048442,1.23413690309903,1.39520366850245,1.60964040839772,1.5179494507732,0.987359099480883,1.14917224855367,0.891756905004413,1.02339991197733,0.439100230582101,0.671032093801859,6.30869845692382,5.65975368086064,18.1730330641089,3.17340679996253,4.05247676016945,4.87697010906921,6.57224052742676,6.05050573870028,4.22518283305254,4.94586627892654,2.37264530772256,6.42325923423642,6.53471542880701,7.56034593756373,8.96834800747953,4.49409704327111,3.02593269824572,3.38540164532424,4.1726938209678,6.39791670614481,11.270773567308,5.29493452397817,4.26695471768777,7.43439690837377,3.41477300470989,5.75679577120448,4.23896565171712,6.78684401569903,0,12.1796927172749,16.5109555895091,18.438693215558,19.2717115319078,17.1235783424216,14.5136735515409,15.247895284893,12.1601420081277,10.158772287959,5.75072826109418,14.5134969590716,7.80094182786401,2.77836765741823,1.4351793081753,1.4473305640901,5.17308932466493,3.60033682363921,4.56301934037672,3.56464680127895,4.92849521405854,6.53274404023081,3.57065461329021,5.07347484430277,3.31033802623001,3.5434350343804,3.50800491046472,2.62181303545181,2.59027472798843,2.16973587872267,10.5553898757491,8.15858525728064,11.8023425524569,7.45029215022778,4.81651769963376,5.39173758324135,6.55739781506702,3.02965112645248,13.8823616543153,13.6653560503823,22.4040333642111,19.5954414321093,17.3782965784267,16.1353622549635,27.9319384155677,18.9966307642353,27.6701444562566,5.78378369559253,10.5035663054119,11.3961986347043,11.7278610734575,7.4236555337641,2.65490276679926,6.06951590387454,3.93020624054176,3.39489143560617,6.79194353625777,3.3817866273832,5.16856586336442,3.27180356529755,3.20847640546249,3.16036757935816,1.05418608574999,3.09406629744561,5.44703369206061,2.88097750450096,4.13947788104814,4.28674070063185,6.7389288784064,7.31312152168489,5.43011767986999,9.74287837166718,4.4587624532105,34.9522916925303,1.10264199027481,14.5099902588502,12.9171541356724,9.77069383836125,14.4440536243795,15.2651036762907,3.49777003955821,6.11903496634682,46.4768795770159,9.08102219038179,17.4082855727529,49.352535735229,58.6418236923198,59.4823250336959,9.5187920796559,6.15786390224095,6.90999869022119,4.77335309007557,7.11755985557555,4.67634774391752,7.02034715341708,7.3180903605064,6.11415178489297,8.36158947585888,10.083721598491,3.92633912976044,4.27729411862916,6.21339313086926,1.12738587736838,9.27002585472668,5.95650565645551,7.19469396872976,4.90807329215378,7.09615727061268,8.56707842114004,11.8485990207995,8.59846624290829,2.89900944991207,3.74439008135225,5.37218905067903,5.0681303822541,5.95723551555998,3.63778304337826,3.04345382634718,4.76835251475036,3.72605893511903,2.51072196196781,2.72609414859999,3.27689268616499,3.7305688500631,4.19068887180935,2.5977197242889,4.44132228289962,3.17422537061296,7.76950836809226,6.01082839283487,3.02192309455341,14.1028403643499,4.129014459926,7.3260649706906,15.2201549146137,1.50471631210609,6.7770221114048,4.60325236507177,5.72895513439397,6.18671456437275,5.48066015816514,0,4.72515750162264,5.40385443869065,4.98456649882625,6.73088405277366,1.55681021376265,7.58147259461959,6.31714341290296,6.07766792670735,4.40187641518763,3.12533964365024,4.66718128383392,7.0051919461224,6.09746498224449,9.6024940470243,5.83002389747551,5.09291121742406,5.15028291084353,6.08238947846258,5.80098236451694,4.76293691283074,4.86714168968393,5.98018583437486,7.82963211526283,4.71036544430071,5.82877729055206,6.21165321557681,6.19934093863034,4.94177816549917,5.64656282491984,6.8537832392258,6.21955107767427,8.94437018888666,5.70377278152619,5.61142271657738,6.16902094245706,4.23569274214923,4.50154147486658,4.49316839439301,7.71626443924566,9.99242311751784,7.48581147025307,9.66919743217342,5.54736162999646,10.1472052794977,5.10109238364927
|short_description=p2@Sema4b
}}
}}

Revision as of 23:56, 18 April 2012

Short description:p2@Sema4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sema4b_5end
Coexpression cluster:NA
Association with transcript: 26bp_to_ENSMUST00000123023_5end
EntrezGene:Sema4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sema4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I621.84
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.15
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.27
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A155.96
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A359.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A571.36
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A250.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A447.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A667.90
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.41
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D128.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D227.30
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I118.95
GP2+ M cell, pool3.CNhs13240.11847-124I216.16
Ileum epithelium, pool1.CNhs13199.10252-104B93.80
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I398.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6118.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E995.09
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.52
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.25
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.67
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A237.42
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C311.13
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.54
Mouse Meningeal cells, donor3.CNhs12109.11639-122D120.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C87.49
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.03
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.98
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.18
Mouse Schwann, donor1.CNhs12507.11728-123D95.76
Mouse Schwann, donor2.CNhs12573.11746-123F916.70
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.18
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.08
accessory axillary lymph node, adult.CNhs10475.1063-29H923.30
adrenal gland, adult.CNhs10508.49-24D711.43
adrenal gland, embryo E14.CNhs11038.406-44C58.15
adrenal gland, embryo E16.CNhs11004.1254-43D614.31
adrenal gland, embryo E17.CNhs11043.1263-45I112.45
adrenal gland, embryo E18.CNhs11026.1262-18F58.29
adrenal gland, neonate N00.CNhs11191.1311-23C113.05
adrenal gland, neonate N25.CNhs11223.1377-27I313.57
amnion, adult pregnant day17.5.CNhs10488.583-22A88.40
aorta, adult.CNhs10498.46-23H116.48
bone (os femoris), adult.CNhs10483.56-12G227.42
bone (os femoris), neonate N02.CNhs11227.1985-43F56.63
bone (os femoris), neonate N16.CNhs11225.1525-43A626.50
bone (os femoris), neonate N20.CNhs11195.1350-25C327.64
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H79.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.45
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D56.61
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.62
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A218.54
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C64.97
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G86.28
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E27.11
forelimb, embryo E12.CNhs10600.359-14H24.92
forelimb, embryo E13.CNhs10589.384-1E27.57
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B57.82
gonad, embryo E13.CNhs11044.1564-45I68.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G15.66
intestinal mucosa, adult.CNhs10506.860-29I318.17
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D86.57
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E96.42
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A58.97
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F86.40
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G77.43
kidney, neonate N10.CNhs11206.758-6D53.41
kidney, neonate N20.CNhs11113.832-19I15.76
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H16.79
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F812.18
liver, embryo E13.CNhs10524.378-3H616.51
liver, embryo E14.CNhs10594.409-16E118.44
liver, embryo E15.CNhs10520.433-16D719.27
liver, embryo E16.CNhs10523.462-17F517.12
liver, embryo E17.CNhs10510.481-18A314.51
liver, embryo E18.CNhs10579.499-43G415.25
liver, neonate N00.CNhs11117.641-24F412.16
liver, neonate N03.CNhs11123.1345-25G210.16
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H214.51
liver, neonate N10.CNhs11115.751-24B97.80
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B15.17
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C53.56
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A66.53
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E53.31
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.40
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D719.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.14
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D427.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D627.67
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I710.50
ovary, embryo E18.CNhs11040.505-44H711.40
ovary, neonate N00.CNhs11217.1299-22I411.73
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C74.14
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B96.74
pituitary gland, embryo E16.CNhs11036.449-43F67.31
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G334.95
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C314.51
skin, neonate N00.CNhs11124.650-25G412.92
skin, neonate N03.CNhs11215.662-22H39.77
skin, neonate N06.CNhs11097.693-20I514.44
skin, neonate N10.CNhs11108.762-6C415.27
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G246.48
spleen, embryo E16.CNhs11035.461-43C19.08
spleen, embryo E18.CNhs11011.1271-21F217.41
spleen, neonate N10.CNhs11116.752-24D149.35
spleen, neonate N20.CNhs11112.824-19H158.64
spleen, neonate N25.CNhs11099.1354-25G359.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.91
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E37.12
stomach, embryo E15.CNhs10603.1252-16G84.68
stomach, embryo E16.CNhs11022.459-17D47.02
stomach, embryo E17.CNhs11006.1035-18D57.32
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B88.36
stomach, neonate N07.CNhs11210.718-18A910.08
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I14.28
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F59.27
testis, embryo E15.CNhs11034.443-27C55.96
testis, embryo E16.CNhs11033.470-26G57.19
testis, embryo E17.CNhs11029.486-18I54.91
testis, embryo E18.CNhs11027.503-18G57.10
testis, neonate N00.CNhs11189.1300-22B78.57
testis, neonate N07.CNhs11222.726-26I411.85
testis, neonate N10.CNhs11204.763-44D98.60
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I25.96
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F83.73
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.73
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E43.73
thymus, neonate N20.CNhs11186.820-7A24.19
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G24.44
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.01
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E414.10
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E57.33
vagina, adult.CNhs10502.89-27D515.22
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H26.32
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I59.99
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C29.67
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D110.15
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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