FFCP PHASE1:Mm9::chr18:57302436..57302450,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70417 | |EntrezGene=70417 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=112 | |||
|TSSclassifier=NA | |||
|UniProt=Q6DIB5 | |UniProt=Q6DIB5 | ||
|association_with_transcript=0bp_to_ENSMUST00000139892,uc008eza.1_5end | |association_with_transcript=0bp_to_ENSMUST00000139892,uc008eza.1_5end | ||
|cluster_id=chr18:57302436..57302450,+ | |||
|description=CAGE_peak_8_at_Megf10_5end | |description=CAGE_peak_8_at_Megf10_5end | ||
|id=chr18:57302436..57302450,+ | |id=chr18:57302436..57302450,+ | ||
|ontology_enrichment_celltype=CL:0000630!1.95e-12!3;CL:0000107!1.09e-10!9;CL:0000325!2.55e-09!2;CL:0000217!2.55e-09!2;CL:0000328!2.55e-09!2;CL:0002573!2.55e-09!2;CL:0002376!2.55e-09!2;CL:0000218!2.55e-09!2;CL:0000692!2.55e-09!2;CL:0002377!2.55e-09!2;CL:0002375!2.55e-09!2;CL:0000221!3.94e-07!44;CL:0000133!3.94e-07!44 | |ontology_enrichment_celltype=CL:0000630!1.95e-12!3;CL:0000107!1.09e-10!9;CL:0000325!2.55e-09!2;CL:0000217!2.55e-09!2;CL:0000328!2.55e-09!2;CL:0002573!2.55e-09!2;CL:0002376!2.55e-09!2;CL:0000218!2.55e-09!2;CL:0000692!2.55e-09!2;CL:0002377!2.55e-09!2;CL:0002375!2.55e-09!2;CL:0000221!3.94e-07!44;CL:0000133!3.94e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000217,4.23e-36,2;CL:0000328,4.23e-36,2;CL:0002573,4.23e-36,2;CL:0002376,4.23e-36,2;CL:0000218,4.23e-36,2;CL:0000692,4.23e-36,2;CL:0002377,4.23e-36,2;CL:0002375,4.23e-36,2;CL:0000215,1.74e-24,3;CL:0000333,4.34e-08,10;CL:0000095,4.34e-08,10;CL:0000243,4.34e-08,10;CL:0000123,4.34e-08,10;CL:0000125,4.34e-08,10;CL:0000030,4.34e-08,10;CL:0000339,4.34e-08,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!6.10e-17!11;UBERON:0002410!1.09e-10!9;UBERON:0004121!3.94e-10!102;UBERON:0000924!3.94e-10!102;UBERON:0006601!3.94e-10!102;UBERON:0000020!5.79e-08!12;UBERON:0001032!5.79e-08!12;UBERON:0004456!5.79e-08!12;UBERON:0005085!2.50e-07!13;UBERON:0000970!2.73e-07!9;UBERON:0000019!2.73e-07!9;UBERON:0000047!2.73e-07!9;UBERON:0004088!2.73e-07!9;UBERON:0002104!2.73e-07!9;UBERON:0001456!2.73e-07!9;UBERON:0003072!2.73e-07!9;UBERON:0003071!2.73e-07!9;UBERON:0004128!2.73e-07!9 | |ontology_enrichment_uberon=UBERON:0000010!6.10e-17!11;UBERON:0002410!1.09e-10!9;UBERON:0004121!3.94e-10!102;UBERON:0000924!3.94e-10!102;UBERON:0006601!3.94e-10!102;UBERON:0000020!5.79e-08!12;UBERON:0001032!5.79e-08!12;UBERON:0004456!5.79e-08!12;UBERON:0005085!2.50e-07!13;UBERON:0000970!2.73e-07!9;UBERON:0000019!2.73e-07!9;UBERON:0000047!2.73e-07!9;UBERON:0004088!2.73e-07!9;UBERON:0002104!2.73e-07!9;UBERON:0001456!2.73e-07!9;UBERON:0003072!2.73e-07!9;UBERON:0003071!2.73e-07!9;UBERON:0004128!2.73e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,4.28e-15,11;UBERON:0000970,1.00e-08,9;UBERON:0000019,1.00e-08,9;UBERON:0000047,1.00e-08,9;UBERON:0010312,1.00e-08,9;UBERON:0004088,1.00e-08,9;UBERON:0002104,1.00e-08,9;UBERON:0001456,1.00e-08,9;UBERON:0003072,1.00e-08,9;UBERON:0004128,1.00e-08,9;UBERON:0003071,1.00e-08,9;UBERON:0001444,2.59e-07,11;UBERON:0010313,5.46e-07,3;UBERON:0002342,5.46e-07,3;UBERON:0002005,5.46e-07,3;UBERON:0005428,5.46e-07,3;UBERON:0005062,5.46e-07,3;UBERON:0000020,8.83e-07,12;UBERON:0001032,8.83e-07,12;UBERON:0004456,8.83e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,23.5508461266202,26.6767607176953,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,1.20563854268572,1.2246569847239,0.640568601424249,0.843315521037559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,1.17131623288992,0.861693590931196,0.716906393857656,0.222798674082394,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,23.5508461266202,26.6767607176953,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,1.20563854268572,1.2246569847239,0.640568601424249,0.843315521037559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,1.17131623288992,0.861693590931196,0.716906393857656,0.222798674082394,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p8@Megf10 | |short_description=p8@Megf10 | ||
}} | }} |
Latest revision as of 12:26, 1 October 2015
Short description: | p8@Megf10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Megf10_5end |
Coexpression cluster: | MCL_coexpression_mm9:112 |
Association with transcript: | 0bp_to_ENSMUST00000139892, uc008eza.1_5end |
EntrezGene: | Megf10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 4.23e-36 | 2 |
myelin accumulating cell | 4.23e-36 | 2 |
Schwann cell | 4.23e-36 | 2 |
non-myelinating Schwann cell | 4.23e-36 | 2 |
myelinating Schwann cell;;Schwann cell | 4.23e-36 | 2 |
terminal Schwann cell | 4.23e-36 | 2 |
immature Schwann cell | 4.23e-36 | 2 |
Schwann cell precursor | 4.23e-36 | 2 |
barrier cell | 1.74e-24 | 3 |
migratory neural crest cell | 4.34e-08 | 10 |
neuron associated cell | 4.34e-08 | 10 |
glial cell (sensu Vertebrata) | 4.34e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 4.34e-08 | 10 |
glial cell | 4.34e-08 | 10 |
glioblast | 4.34e-08 | 10 |
glioblast (sensu Vertebrata) | 4.34e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 4.28e-15 | 11 |
eye | 1.00e-08 | 9 |
camera-type eye | 1.00e-08 | 9 |
simple eye | 1.00e-08 | 9 |
immature eye | 1.00e-08 | 9 |
ocular region | 1.00e-08 | 9 |
visual system | 1.00e-08 | 9 |
face | 1.00e-08 | 9 |
optic cup | 1.00e-08 | 9 |
optic vesicle | 1.00e-08 | 9 |
eye primordium | 1.00e-08 | 9 |
subdivision of head | 2.59e-07 | 11 |
neural crest-derived structure | 5.46e-07 | 3 |
neural crest | 5.46e-07 | 3 |
enteric nervous system | 5.46e-07 | 3 |
vagal neural crest | 5.46e-07 | 3 |
neural fold | 5.46e-07 | 3 |
sense organ | 8.83e-07 | 12 |
sensory system | 8.83e-07 | 12 |
entire sense organ system | 8.83e-07 | 12 |