FFCP PHASE1:Mm9::chr7:87331795..87331818,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20352 | |EntrezGene=20352 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q62179,F2Z3W4 | |UniProt=Q62179,F2Z3W4 | ||
|association_with_transcript=68bp_to_ENSMUST00000032754,ENSMUST00000107383,NM_013659,uc009hzo.1,uc009hzp.1_5end | |association_with_transcript=68bp_to_ENSMUST00000032754,ENSMUST00000107383,NM_013659,uc009hzo.1,uc009hzp.1_5end | ||
|cluster_id=chr7:87331795..87331818,+ | |||
|description=CAGE_peak_4_at_Sema4b_5end | |description=CAGE_peak_4_at_Sema4b_5end | ||
|id=chr7:87331795..87331818,+ | |id=chr7:87331795..87331818,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000075,4.23e-08,7;CL:0002563,5.41e-08,9;CL:0002251,5.41e-08,9;CL:0000239,1.88e-07,6;CL:0000677,1.88e-07,6;CL:0000584,1.88e-07,6;CL:0000066,2.24e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.89e-09!15;UBERON:0001242!3.33e-08!13;UBERON:0000060!3.33e-08!13;UBERON:0001262!3.33e-08!13;UBERON:0004786!3.33e-08!13;UBERON:0000160!3.69e-08!43;UBERON:0005409!2.24e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.04e-18,31;UBERON:0005409,2.40e-16,47;UBERON:0000344,5.63e-14,15;UBERON:0001242,5.11e-12,13;UBERON:0001262,5.11e-12,13;UBERON:0004786,5.11e-12,13;UBERON:0003350,5.41e-08,9;UBERON:0004808,5.41e-08,9;UBERON:0001277,5.41e-08,9;UBERON:0004923,6.81e-08,24;UBERON:0000485,1.29e-07,11;UBERON:0007023,3.98e-07,51 | |||
|phase1_expression=0.80074423552397,32.4547129104606,36.8549383905524,19.3577095236371,27.5492651470491,3.3575854382378,4.43864017131499,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,1.78590909317247,0,0,9.11956809922418,12.6175104586944,19.5238867799107,12.4920978886132,9.26526300549323,16.1519906537918,10.0812051903972,9.3126814475228,0,0.61506478758457,0,1.1554064790051,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.550640256485045,0,0.65407546914134,1.75748946187577,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,0,0.606949382578793,0.528990979272033,0.633831403506179,0.677689064138264,0.889294796111139,0,0.988866362566974,0.7104801149461,0.599200221036809,0.768436610643109,0,0.135005938331691,0,1.71390590642282,0.662605622854841,0.122490799214954,0.191690942036473,0,0,0.638436690425939,0.46081959976873,0.263772575460388,0.274462930807229,1.04182674111352,0,0,0.763991238884051,1.76777151284201,1.28134512719193,0.559198337475902,0.302904773332736,1.28471652181535,2.6087803983151,2.58127163094416,0,0,0,0.448026887097336,0.983110940922263,0.170430322578058,0,0,2.53518155598025,0,0,0,2.16491041011214,1.26679932737549,1.01104889002957,2.2836775943812,0.517875767294343,2.3750742250372,1.04091196059682,1.52232739156071,3.45923245884088,2.56228488939458,1.76383060703557,4.14699751387929,0.988779870937496,8.09756398751505,0.884610551949874,0.323533699894818,0.441683036920787,0,11.1835056730873,0,0.83778682725382,12.7728527604296,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0,0,0.62336413367868,0.648965052271031,0,1.11966273549084,0.505445516867349,2.94618598241064,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.384341160854549,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0,0,0,1.02891068203972,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0.817357396570186,0.658239399653922,0.164167464079095,0.891756905004413,0.877199924551994,0.439100230582101,0.402619256281115,0.630869845692382,0,47.5803047496669,12.9580777665137,0.213288250535234,0,0.257734922644187,0.403367049246685,0.22237804384487,1.33157938278791,10.9141684155238,3.45867804920423,1.50801125280162,2.98434708061726,6.43381487493096,7.19055526923377,9.07779809473716,7.96565093017469,0,0,1.1270773567308,0,1.35766741017338,0.841629838683823,1.07502113111237,2.36176236767363,1.41298855057237,4.19550357334122,0.889357881261447,0.166845105716094,0,0,0,0,0,0,0.324270453550071,0.274561413188081,1.43768206527355,2.23284568601102,0.936113019343682,0.757736633841335,0.717589654087649,0.964887042726734,0.184753190166605,0,0,0,0.469380496577004,0,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.81931657357869,0.345369963731791,0.723245292907558,0,0,1.47529281905711,1.65562047782839,0.481651769963376,1.17211686592203,0.163934945376675,0.252470927204373,0.315508219416257,1.56175497718655,0.646270193198397,0.238968797952552,0.222798674082394,0.849229592366497,0,0.584511715822624,0.790575555893047,0.321321316421807,1.41940085208269,0.712262414669021,0.651547837414304,1.81467135269789,0,0.971122544619926,0.604647113929502,0.188605079755898,0.885905678642318,0.614870295887855,0.775284879504663,1.45413491791002,0.712994756769443,0,0,0,3.40439605753788,0.18006109403131,0.517434735131018,0.214337035031592,1.24138163549592,0.535106452806212,0.493647061806363,1.522324745573,0,2.33015277950202,0.661585194164886,2.63818004706368,0.322928853391811,0.663442174209714,1.19372344003136,1.14898629821543,7.57850175237612,0.18542530201051,0.170870880797853,0,0,0,0.546776910884101,0.228778173206523,0.169978429993855,0,0,9.54670618015114,0.158167996790568,0,0.432021363287205,1.67270636811575,3.05707589244649,2.15782954215713,2.0663363931334,2.6175594198403,7.90651337079936,12.4267862617385,0,0.897099276263873,0.496375471371293,0.388902376688095,0.516639293910924,0.675824501963113,1.17357238645754,1.17183946359555,1.36317147753424,0.724752362478018,0.864090018773596,0.632022241256357,0.810900861160657,0.924398614483445,0.389762468933385,0.358053391334963,0.39736270956253,0.721172697119813,0.443068581523732,0.302899349844443,0.228620419965,0.403304740547362,0.38983152295901,0.192423683280659,0.233753804363138,2.0405734525369,1.33191572024439,0.179427713218951,0.839423081820392,3.09103350451505,2.62755465631655,0.915758121336325,5.35920947697665,2.50786052017682,1.6942555278512,0.460325236507177,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,1.03017528619447,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.655490552289177,1.34452820050225,0.804096565378586,0.476293691283074,0.695305955669133,0.77163688185482,0.824171801606613,0.294397840268795,0,1.24233064311536,1.43061713968393,0.872078499793971,0.846984423737976,0.761531471025089,0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| |phase1_expression=0.80074423552397,32.4547129104606,36.8549383905524,19.3577095236371,27.5492651470491,3.3575854382378,4.43864017131499,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,1.78590909317247,0,0,9.11956809922418,12.6175104586944,19.5238867799107,12.4920978886132,9.26526300549323,16.1519906537918,10.0812051903972,9.3126814475228,0,0.61506478758457,0,1.1554064790051,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.550640256485045,0,0.65407546914134,1.75748946187577,0.777719596297134,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0.85960031981627,0,0.606949382578793,0.528990979272033,0.633831403506179,0.677689064138264,0.889294796111139,0,0.988866362566974,0.7104801149461,0.599200221036809,0.768436610643109,0,0.135005938331691,0,1.71390590642282,0.662605622854841,0.122490799214954,0.191690942036473,0,0,0.638436690425939,0.46081959976873,0.263772575460388,0.274462930807229,1.04182674111352,0,0,0.763991238884051,1.76777151284201,1.28134512719193,0.559198337475902,0.302904773332736,1.28471652181535,2.6087803983151,2.58127163094416,0,0,0,0.448026887097336,0.983110940922263,0.170430322578058,0,0,2.53518155598025,0,0,0,2.16491041011214,1.26679932737549,1.01104889002957,2.2836775943812,0.517875767294343,2.3750742250372,1.04091196059682,1.52232739156071,3.45923245884088,2.56228488939458,1.76383060703557,4.14699751387929,0.988779870937496,8.09756398751505,0.884610551949874,0.323533699894818,0.441683036920787,0,11.1835056730873,0,0.83778682725382,12.7728527604296,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0,0,0.62336413367868,0.648965052271031,0,1.11966273549084,0.505445516867349,2.94618598241064,0.130120442962704,0,0.180062129805349,0.150704817835715,0.272145996605311,0.384341160854549,0.374806898238915,1.03481348295606,0,0,0.175951124163949,0,0,0,1.02891068203972,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0.817357396570186,0.658239399653922,0.164167464079095,0.891756905004413,0.877199924551994,0.439100230582101,0.402619256281115,0.630869845692382,0,47.5803047496669,12.9580777665137,0.213288250535234,0,0.257734922644187,0.403367049246685,0.22237804384487,1.33157938278791,10.9141684155238,3.45867804920423,1.50801125280162,2.98434708061726,6.43381487493096,7.19055526923377,9.07779809473716,7.96565093017469,0,0,1.1270773567308,0,1.35766741017338,0.841629838683823,1.07502113111237,2.36176236767363,1.41298855057237,4.19550357334122,0.889357881261447,0.166845105716094,0,0,0,0,0,0,0.324270453550071,0.274561413188081,1.43768206527355,2.23284568601102,0.936113019343682,0.757736633841335,0.717589654087649,0.964887042726734,0.184753190166605,0,0,0,0.469380496577004,0,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0.81931657357869,0.345369963731791,0.723245292907558,0,0,1.47529281905711,1.65562047782839,0.481651769963376,1.17211686592203,0.163934945376675,0.252470927204373,0.315508219416257,1.56175497718655,0.646270193198397,0.238968797952552,0.222798674082394,0.849229592366497,0,0.584511715822624,0.790575555893047,0.321321316421807,1.41940085208269,0.712262414669021,0.651547837414304,1.81467135269789,0,0.971122544619926,0.604647113929502,0.188605079755898,0.885905678642318,0.614870295887855,0.775284879504663,1.45413491791002,0.712994756769443,0,0,0,3.40439605753788,0.18006109403131,0.517434735131018,0.214337035031592,1.24138163549592,0.535106452806212,0.493647061806363,1.522324745573,0,2.33015277950202,0.661585194164886,2.63818004706368,0.322928853391811,0.663442174209714,1.19372344003136,1.14898629821543,7.57850175237612,0.18542530201051,0.170870880797853,0,0,0,0.546776910884101,0.228778173206523,0.169978429993855,0,0,9.54670618015114,0.158167996790568,0,0.432021363287205,1.67270636811575,3.05707589244649,2.15782954215713,2.0663363931334,2.6175594198403,7.90651337079936,12.4267862617385,0,0.897099276263873,0.496375471371293,0.388902376688095,0.516639293910924,0.675824501963113,1.17357238645754,1.17183946359555,1.36317147753424,0.724752362478018,0.864090018773596,0.632022241256357,0.810900861160657,0.924398614483445,0.389762468933385,0.358053391334963,0.39736270956253,0.721172697119813,0.443068581523732,0.302899349844443,0.228620419965,0.403304740547362,0.38983152295901,0.192423683280659,0.233753804363138,2.0405734525369,1.33191572024439,0.179427713218951,0.839423081820392,3.09103350451505,2.62755465631655,0.915758121336325,5.35920947697665,2.50786052017682,1.6942555278512,0.460325236507177,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,1.03017528619447,0.320919209591815,0.505394423527595,0.760437899670719,0.188626341386076,0.655490552289177,1.34452820050225,0.804096565378586,0.476293691283074,0.695305955669133,0.77163688185482,0.824171801606613,0.294397840268795,0,1.24233064311536,1.43061713968393,0.872078499793971,0.846984423737976,0.761531471025089,0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| ||
|short_description=p4@Sema4b | |short_description=p4@Sema4b | ||
}} | }} |
Latest revision as of 03:27, 27 September 2015
Short description: | p4@Sema4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sema4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 68bp_to_ENSMUST00000032754, ENSMUST00000107383, NM_013659, uc009hzo.1, uc009hzp.1_5end |
EntrezGene: | Sema4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 4.23e-08 | 7 |
intestinal epithelial cell | 5.41e-08 | 9 |
epithelial cell of alimentary canal | 5.41e-08 | 9 |
brush border epithelial cell | 1.88e-07 | 6 |
gut absorptive cell | 1.88e-07 | 6 |
enterocyte | 1.88e-07 | 6 |
epithelial cell | 2.24e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.04e-18 | 31 |
gastrointestinal system | 2.40e-16 | 47 |
mucosa | 5.63e-14 | 15 |
intestinal mucosa | 5.11e-12 | 13 |
wall of intestine | 5.11e-12 | 13 |
gastrointestinal system mucosa | 5.11e-12 | 13 |
epithelium of mucosa | 5.41e-08 | 9 |
gastrointestinal system epithelium | 5.41e-08 | 9 |
intestinal epithelium | 5.41e-08 | 9 |
organ component layer | 6.81e-08 | 24 |
simple columnar epithelium | 1.29e-07 | 11 |
adult organism | 3.98e-07 | 51 |