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FFCP PHASE1:Mm9::chrX:71070277..71070316,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=245469
|EntrezGene=245469
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q9QY39,A2AFG3
|UniProt=Q9QY39,A2AFG3
|association_with_transcript=0bp_to_ENSMUST00000002080,ENSMUST00000114438,NM_001029868,uc009tmt.1,uc009tmu.1_5end
|association_with_transcript=0bp_to_ENSMUST00000002080,ENSMUST00000114438,NM_001029868,uc009tmt.1,uc009tmu.1_5end
|cluster_id=chrX:71070277..71070316,-
|description=CAGE_peak_1_at_Pdzd4_5end
|description=CAGE_peak_1_at_Pdzd4_5end
|id=chrX:71070277..71070316,-
|id=chrX:71070277..71070316,-
|ontology_enrichment_celltype=CL:0000117!1.51e-14!23;CL:0000337!1.51e-14!23;CL:0000540!1.61e-14!33;CL:0000047!1.61e-14!33;CL:0000031!1.61e-14!33;CL:0000404!1.61e-14!33;CL:0000393!9.14e-13!39;CL:0000211!9.14e-13!39;CL:0000221!6.66e-12!44;CL:0000133!6.66e-12!44;CL:0002319!8.42e-12!43;CL:0000055!2.93e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000117,6.55e-15,23;CL:0000337,6.55e-15,23;CL:0000540,6.98e-15,33;CL:0000047,6.98e-15,33;CL:0000031,6.98e-15,33;CL:0000404,6.98e-15,33;CL:0000393,4.45e-13,39;CL:0000211,4.45e-13,39;CL:0000221,2.37e-12,44;CL:0000133,2.37e-12,44;CL:0002319,3.00e-12,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.73e-29!73;UBERON:0005743!9.73e-29!73;UBERON:0000073!9.76e-28!75;UBERON:0001016!9.76e-28!75;UBERON:0004121!5.99e-26!102;UBERON:0000924!5.99e-26!102;UBERON:0006601!5.99e-26!102;UBERON:0002346!4.54e-25!71;UBERON:0003075!4.54e-25!71;UBERON:0007284!4.54e-25!71;UBERON:0001049!2.91e-24!52;UBERON:0005068!2.91e-24!52;UBERON:0006241!2.91e-24!52;UBERON:0007135!2.91e-24!52;UBERON:0000033!5.82e-24!63;UBERON:0000955!7.42e-23!50;UBERON:0006238!7.42e-23!50;UBERON:0002616!2.36e-22!49;UBERON:0003056!3.07e-21!49;UBERON:0003080!2.28e-19!40;UBERON:0002020!2.38e-19!34;UBERON:0002780!7.27e-19!39;UBERON:0001890!7.27e-19!39;UBERON:0006240!7.27e-19!39;UBERON:0000153!4.89e-17!94;UBERON:0002791!2.00e-16!29;UBERON:0003528!2.00e-16!29;UBERON:0001893!2.00e-16!29;UBERON:0007811!3.17e-16!86;UBERON:0000956!1.60e-11!21;UBERON:0001869!1.60e-11!21;UBERON:0000203!1.60e-11!21;UBERON:0002619!2.28e-09!17;UBERON:0002021!1.85e-07!10;UBERON:0000411!1.85e-07!10;UBERON:0001950!1.85e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.04e-29,73;UBERON:0001016,1.13e-28,75;UBERON:0002346,1.67e-27,64;UBERON:0003075,1.67e-27,64;UBERON:0007284,1.67e-27,64;UBERON:0004121,3.05e-27,95;UBERON:0000924,3.05e-27,95;UBERON:0006601,3.05e-27,95;UBERON:0000073,3.78e-26,54;UBERON:0010371,2.86e-25,73;UBERON:0001049,6.75e-25,52;UBERON:0005068,6.75e-25,52;UBERON:0006241,6.75e-25,52;UBERON:0007135,6.75e-25,52;UBERON:0003056,8.66e-22,49;UBERON:0000955,9.59e-22,47;UBERON:0006238,9.59e-22,47;UBERON:0002616,3.09e-21,46;UBERON:0003080,7.27e-20,40;UBERON:0002020,7.57e-20,34;UBERON:0002780,2.39e-19,39;UBERON:0001890,2.39e-19,39;UBERON:0006240,2.39e-19,39;UBERON:0003528,7.69e-17,29;UBERON:0002791,7.69e-17,29;UBERON:0001893,7.69e-17,29;UBERON:0010314,2.34e-16,92;UBERON:0000956,8.42e-12,21;UBERON:0001869,8.42e-12,21;UBERON:0000203,8.42e-12,21;UBERON:0002619,1.38e-09,17;UBERON:0002021,1.27e-07,10;UBERON:0000411,1.27e-07,10;UBERON:0001950,1.27e-07,10
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|phase1_expression=8.0074423552397,0,0,0,0,0.16787927191189,0.934450562382103,0.258246646883153,0.281577444303333,0.936258105287974,0.171217968225505,0.0797721589953364,0.684802919724823,0.611942816932982,0.333109761815663,0.607425802169478,0,0.473193248037357,0.685572168028694,1.27316895539409,8.24919914465377,2.18440092641948,1.56719873483361,0,0,0.57423196411502,0,0.215471232685889,0,0,0.221730510655305,0,1.23012957516914,0,0,0,0.204169356262369,0,0,0,0.588231488031014,0,0,5.91715044485213,4.46058497365864,3.30384153891027,3.12956537739216,3.2703773457067,2.85592037554813,2.72201858703997,2.37976916763116,0,0.167782606057736,0.725362142011344,0.672187598284928,1.02903774414379,2.29226751951005,1.54701627683233,77.6895209700856,87.8125025591575,70.9891171926921,4.74382344896785,1.77858959222228,0.449949858640699,0,0,7.49000276296012,11.9107674649682,41.683224148008,44.0119358961312,46.9024663813582,38.8485338789173,36.2224407160646,52.0585896663555,59.2325010892701,43.203282970671,35.2370819198044,35.6247673257674,32.8717981168361,83.7477927086731,92.676982969241,68.7605649134923,24.5681039121215,37.1423322620909,35.6019917319968,42.4265163082082,40.5759290277443,64.494208255554,1.06016670666458,2.11600368298999,2.6087803983151,0.860423876981386,0,0,0.649776417447669,0,2.10666630197628,2.04516387093669,3.11743205523443,0.70667914902068,6.4787973097273,2.56652954828636,15.2883143823987,21.3320010945999,0.216491041011214,1.52015919285059,0,1.37020655662872,0.776813650941515,2.82040064223167,3.64319186208885,4.26251669636998,2.30615497256059,3.3158980921577,2.70454026412121,1.75933227861546,0.494389935468748,1.01219549843938,1.76922110389975,1.94120219936891,1.54589062922275,1.45462575940567,0,26.9358333250623,29.3225389538837,0,0.958520996047362,0,0.889491589511453,29.2091746839404,48.952564501593,96.1255793663413,35.6339856394167,59.8374170152973,29.7136903720171,46.5632425004464,6.31404055871961,1.49288364732112,0,3.15662783829711,5.72529949035896,6.66716102857071,6.84236093260327,10.0972227949929,10.9538763633638,13.9643955110486,13.6804517857204,10.3481348295606,4.95806383745537,8.13156144721623,8.2697028357056,5.04150184583422,9.45360647367033,4.87553033131033,4.7329891373827,8.55847347319521,0,0,0,1.24275463521301,1.17263029990548,2.52086886045421,1.65721314909647,0.983821158737019,1.3884040159864,0.465067889500816,1.07309360559848,1.28441876603886,1.15191894939436,1.14917224855367,0.648550476366846,0.877199924551994,0.878200461164203,0.939444931322602,31.9640721817473,53.3045892124693,0,0,6.82522401712749,7.19933682767359,4.25262622362908,2.62188582010345,1.11189021922435,2.28270751335071,0.949058123089023,1.4822905925161,1.50801125280162,1.39269530428806,1.36474860983384,0,1.29682829924817,1.39398891278057,4.1726938209678,4.79843752960861,3.38123207019241,4.48032921259691,3.68509725618489,3.50679099451593,3.28829993046138,0.885660887877613,0.784993639206874,0.616985819609003,0,1.00107063429656,1.57247196090562,0.449724224769707,0.405720242777006,0.72353147925725,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0,0,0.739012760666419,4.73728529426212,4.07412441105065,4.58311731593008,3.98973422090454,1.50755631697634,1.6663054862021,1.36593553500459,2.52216230569906,3.32197034473162,4.30527875375215,0.81931657357869,1.55416483679306,1.15719246865209,0,0,0.491764273019036,0.827810238914197,20.068823748474,18.7538698547525,7.04920265119704,0.757412781613119,4.10160685241134,7.41833614163613,9.47862950024315,4.30143836314594,7.5751549188014,6.51076020814315,6.47697122679831,5.26060544240361,4.34816555741176,22.4924921495265,3.40656204499845,9.43747699436453,6.8412522928502,5.44401405809367,0,3.8844901784797,3.62788268357701,1.50884063804718,1.77181135728464,0.614870295887855,2.58428293168221,1.81766864738753,1.42598951353889,1.8962205476149,2.10837217149998,1.03135543248187,5.10659408630682,6.66226047915848,8.66703181344455,9.85950361145325,7.09360934569094,7.49149033928696,9.70839221552514,10.3518082698964,0.23467170806371,0.21183207086382,0.661585194164886,3.79238381765404,3.71368181400583,4.76472106932431,3.34242563208782,3.77524069413641,0.582961673259701,18.17167959703,0.854354403989263,6.19160603889667,1.48155621895769,0.376736914009382,0.683471138605126,0.457556346413045,0.679913719975421,0.419854356970974,0.414599921413271,0,6.95939185878498,4.87966721104437,6.15630442684267,3.55450103224597,4.80397640241591,4.5853877770839,3.96736587481612,2.09404753587224,2.46268449254406,0.621339313086926,0.56369293868419,6.57872802593507,7.94200754194069,6.41688921535357,7.23295011475294,7.60302564708502,4.3422178298929,4.29674469985035,2.09718688851422,0.966336483304024,0.576060012515731,1.89606672376907,3.64905387522296,1.84879722896689,1.42912905275575,1.43221356533985,1.19208812868759,1.68273629327956,2.21534290761866,1.61546319917036,1.98137697303,1.41156659191577,1.94915761479505,3.55983814069219,2.80504565235765,2.0405734525369,0.221985953374065,0.358855426437903,0.335769232728157,3.28422309854724,0.93841237725591,2.93042598827624,4.50173596066038,0,65.5112137435797,51.5564264888038,56.7166558305003,47.4314783268578,60.9723442595872,46.0790277407717,51.3017100176172,54.0385443869065,49.8456649882625,48.6694693046711,8.30298780673413,10.3746467084268,11.7806187970353,9.48116196566347,18.0267319860065,11.9498280492509,9.33436256766784,7.62329711783909,10.9112531261217,9.34979683526051,6.59046179714623,6.79054828989874,7.49132059759059,9.41169740351578,9.41941690872058,8.09699275181225,11.9360855723201,15.046919196169,9.47797571847605,9.27353196846703,8.22886205724997,8.69631450180754,11.2065009275241,7.84870649814574,9.12860990028707,9.39222147597609,10.7927503994936,4.99832451731901,8.14824683075171,6.73370725989286,10.5585166130515,11.5250244379409,10.2307760792422,10.0708946770878,8.10207766120794,28.9780270408017,9.12333272937093,8.59484216193193,5.54736162999646,3.75005412503176,3.01428186306548
|short_description=p1@Pdzd4
|short_description=p1@Pdzd4
}}
}}

Latest revision as of 23:58, 1 October 2015

Short description:p1@Pdzd4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pdzd4_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000002080, ENSMUST00000114438, NM_001029868, uc009tmt.1, uc009tmu.1_5end
EntrezGene:Pdzd4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pdzd4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.46
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C377.69
Mouse Granule cells, donor2.CNhs12357.11731-123E387.81
Mouse Granule cells, donor3.CNhs12108.11636-122C770.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C87.49
Mouse Microglia, donor2.CNhs12634.11736-123E811.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D541.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F544.01
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D946.90
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F138.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D536.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D252.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F259.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D643.20
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D335.24
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F335.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.87
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D483.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F492.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D868.76
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E537.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I635.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D642.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F640.58
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E164.49
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C12.70
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B226.94
cerebellum, neonate N30.CNhs11135.1395-42I229.32
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A429.21
corpus striatum, adult.CNhs10487.19-21D848.95
corpus striatum, neonate N00.CNhs11226.630-43F196.13
cortex, adult.CNhs10473.12-14D535.63
cortex, neonate N30.CNhs11107.1392-42F259.84
diencephalon, adult.CNhs10482.20-12F229.71
diencephalon, neonate N30.CNhs11201.1388-42B246.56
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C65.73
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D410.10
eyeball, neonate N00.CNhs11207.633-15C610.95
eyeball, neonate N01.CNhs11140.1532-43E713.96
eyeball, neonate N02.CNhs11205.1551-44G813.68
eyeball, neonate N16.CNhs11188.777-19A210.35
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H28.13
forelimb, embryo E13.CNhs10589.384-1E28.27
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E79.45
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I68.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E831.96
hippocampus, neonate N00.CNhs11228.627-43G153.30
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D84.25
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F84.80
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G73.51
kidney, neonate N10.CNhs11206.758-6D53.29
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C54.58
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C220.07
medulla oblongata, neonate N30.CNhs11200.1396-42A318.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.05
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I922.49
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H79.44
ovary, neonate N00.CNhs11217.1299-22I46.84
oviduct, adult pregnant day01.CNhs10500.988-6G65.44
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E66.66
pituitary gland, embryo E13.CNhs11009.370-44C78.67
pituitary gland, embryo E14.CNhs11037.398-44A59.86
pituitary gland, embryo E15.CNhs10592.427-16B97.09
pituitary gland, embryo E16.CNhs11036.449-43F67.49
pituitary gland, embryo E17.CNhs11039.1265-44F59.71
pituitary gland, neonate N00.CNhs11190.1308-22E910.35
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H34.76
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C918.17
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C16.19
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E36.96
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D46.16
stomach, embryo E17.CNhs11006.1035-18D53.55
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B84.59
stomach, neonate N07.CNhs11210.718-18A93.97
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F56.58
testis, embryo E15.CNhs11034.443-27C57.94
testis, embryo E16.CNhs11033.470-26G56.42
testis, embryo E17.CNhs11029.486-18I57.23
testis, embryo E18.CNhs11027.503-18G57.60
testis, neonate N00.CNhs11189.1300-22B74.34
testis, neonate N07.CNhs11222.726-26I44.30
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I21.85
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C72.22
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G73.56
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A165.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A251.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A356.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D747.43
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A460.97
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A546.08
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A651.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A754.04
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A849.85
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A948.67
whole body, embryo E11.CNhs11014.324-5I88.30
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H211.78
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B118.03
whole body, embryo E16.CNhs10514.453-14F211.95
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.21
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.85
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.15
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.07
whole body, embryo E17.5.CNhs10513.490-9F98.10
whole body, embryo E17.CNhs10517.475-3I528.98
whole body, embryo E18.CNhs10516.493-3B39.12
whole body, neonate N00.CNhs10525.657-19C28.59
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.55e-1523
neuroblast (sensu Vertebrata)6.55e-1523
neuron6.98e-1533
neuronal stem cell6.98e-1533
neuroblast6.98e-1533
electrically signaling cell6.98e-1533
electrically responsive cell4.45e-1339
electrically active cell4.45e-1339
ectodermal cell2.37e-1244
neurectodermal cell2.37e-1244
neural cell3.00e-1243

Uber anatomy
Ontology termp-valuen
central nervous system1.04e-2973
nervous system1.13e-2875
neurectoderm1.67e-2764
neural plate1.67e-2764
presumptive neural plate1.67e-2764
ectoderm-derived structure3.05e-2795
ectoderm3.05e-2795
presumptive ectoderm3.05e-2795
regional part of nervous system3.78e-2654
ecto-epithelium2.86e-2573
neural tube6.75e-2552
neural rod6.75e-2552
future spinal cord6.75e-2552
neural keel6.75e-2552
pre-chordal neural plate8.66e-2249
brain9.59e-2247
future brain9.59e-2247
regional part of brain3.09e-2146
anterior neural tube7.27e-2040
gray matter7.57e-2034
regional part of forebrain2.39e-1939
forebrain2.39e-1939
future forebrain2.39e-1939
brain grey matter7.69e-1729
regional part of telencephalon7.69e-1729
telencephalon7.69e-1729
structure with developmental contribution from neural crest2.34e-1692
cerebral cortex8.42e-1221
cerebral hemisphere8.42e-1221
pallium8.42e-1221
regional part of cerebral cortex1.38e-0917
occipital lobe1.27e-0710
visual cortex1.27e-0710
neocortex1.27e-0710
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