FFCP PHASE1:Mm9::chr19:6115570..6115587,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=131 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6115570..6115587,+ | |||
|description=CAGE_peak_at_chr19:6115570..6115587,+ | |description=CAGE_peak_at_chr19:6115570..6115587,+ | ||
|id=chr19:6115570..6115587,+ | |id=chr19:6115570..6115587,+ | ||
|ontology_enrichment_celltype=CL:0000239!3.08e-19!6;CL:0000677!3.08e-19!6;CL:0000212!3.08e-19!6;CL:0000584!3.08e-19!6;CL:0000075!2.07e-16!7;CL:0002563!1.23e-12!9;CL:0002251!1.23e-12!9;CL:0000473!1.88e-10!3;CL:0000627!1.88e-10!3;CL:0000682!1.88e-10!3;CL:0000066!3.64e-09!25;CL:0002076!2.44e-07!15 | |ontology_enrichment_celltype=CL:0000239!3.08e-19!6;CL:0000677!3.08e-19!6;CL:0000212!3.08e-19!6;CL:0000584!3.08e-19!6;CL:0000075!2.07e-16!7;CL:0002563!1.23e-12!9;CL:0002251!1.23e-12!9;CL:0000473!1.88e-10!3;CL:0000627!1.88e-10!3;CL:0000682!1.88e-10!3;CL:0000066!3.64e-09!25;CL:0002076!2.44e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.24e-15,6;CL:0000677,2.24e-15,6;CL:0000584,2.24e-15,6;CL:0000075,2.80e-13,7;CL:0002563,1.79e-10,9;CL:0002251,1.79e-10,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.22e-26!43;UBERON:0000344!4.18e-25!15;UBERON:0001242!1.44e-19!13;UBERON:0000060!1.44e-19!13;UBERON:0001262!1.44e-19!13;UBERON:0004786!1.44e-19!13;UBERON:0005409!2.49e-18!59;UBERON:0004923!6.67e-15!24;UBERON:0003350!1.23e-12!9;UBERON:0004808!1.23e-12!9;UBERON:0001277!1.23e-12!9;UBERON:0000331!2.85e-11!3;UBERON:0002116!2.85e-11!3;UBERON:0001204!2.85e-11!3;UBERON:0001168!2.85e-11!3;UBERON:0000485!3.14e-10!11;UBERON:0001007!3.74e-08!128;UBERON:0001555!3.74e-08!128;UBERON:0007026!3.74e-08!128;UBERON:0004119!5.84e-08!130;UBERON:0000925!5.84e-08!130;UBERON:0006595!5.84e-08!130;UBERON:0001962!1.46e-07!2;UBERON:0001961!1.46e-07!2;UBERON:0001744!1.46e-07!2 | |ontology_enrichment_uberon=UBERON:0000160!1.22e-26!43;UBERON:0000344!4.18e-25!15;UBERON:0001242!1.44e-19!13;UBERON:0000060!1.44e-19!13;UBERON:0001262!1.44e-19!13;UBERON:0004786!1.44e-19!13;UBERON:0005409!2.49e-18!59;UBERON:0004923!6.67e-15!24;UBERON:0003350!1.23e-12!9;UBERON:0004808!1.23e-12!9;UBERON:0001277!1.23e-12!9;UBERON:0000331!2.85e-11!3;UBERON:0002116!2.85e-11!3;UBERON:0001204!2.85e-11!3;UBERON:0001168!2.85e-11!3;UBERON:0000485!3.14e-10!11;UBERON:0001007!3.74e-08!128;UBERON:0001555!3.74e-08!128;UBERON:0007026!3.74e-08!128;UBERON:0004119!5.84e-08!130;UBERON:0000925!5.84e-08!130;UBERON:0006595!5.84e-08!130;UBERON:0001962!1.46e-07!2;UBERON:0001961!1.46e-07!2;UBERON:0001744!1.46e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,8.94e-30,3;UBERON:0002116,8.94e-30,3;UBERON:0001204,8.94e-30,3;UBERON:0001168,8.94e-30,3;UBERON:0001242,5.41e-27,13;UBERON:0001262,5.41e-27,13;UBERON:0004786,5.41e-27,13;UBERON:0000344,2.05e-23,15;UBERON:0002108,1.54e-22,4;UBERON:0000160,7.76e-20,31;UBERON:0004923,1.15e-14,24;UBERON:0005409,5.02e-13,47;UBERON:0003350,1.79e-10,9;UBERON:0004808,1.79e-10,9;UBERON:0001277,1.79e-10,9;UBERON:0000485,1.11e-08,11 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,2.41971369045464,3.00537437967808,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.91763712426868,2.8711598205751,0.86152399231815,0.215471232685889,8.93110071444957,2.26827116783938,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,1.42358718463353,1.15289268306808,0.754005626400808,0,0,0.898819408654221,0.648414149624083,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0.348975407639361,1.36499771816861,2.41971369045464,3.00537437967808,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,0.91763712426868,2.8711598205751,0.86152399231815,0.215471232685889,8.93110071444957,2.26827116783938,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,1.42358718463353,1.15289268306808,0.754005626400808,0,0,0.898819408654221,0.648414149624083,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr19:6115570..6115587,+ | |short_description=p@chr19:6115570..6115587,+ | ||
}} | }} |
Latest revision as of 11:59, 4 August 2015
Short description: | p@chr19:6115570..6115587, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6115570..6115587, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.24e-15 | 6 |
gut absorptive cell | 2.24e-15 | 6 |
enterocyte | 2.24e-15 | 6 |
columnar/cuboidal epithelial cell | 2.80e-13 | 7 |
intestinal epithelial cell | 1.79e-10 | 9 |
epithelial cell of alimentary canal | 1.79e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 8.94e-30 | 3 |
ileum | 8.94e-30 | 3 |
mucosa of small intestine | 8.94e-30 | 3 |
wall of small intestine | 8.94e-30 | 3 |
intestinal mucosa | 5.41e-27 | 13 |
wall of intestine | 5.41e-27 | 13 |
gastrointestinal system mucosa | 5.41e-27 | 13 |
mucosa | 2.05e-23 | 15 |
small intestine | 1.54e-22 | 4 |
intestine | 7.76e-20 | 31 |
organ component layer | 1.15e-14 | 24 |
gastrointestinal system | 5.02e-13 | 47 |
epithelium of mucosa | 1.79e-10 | 9 |
gastrointestinal system epithelium | 1.79e-10 | 9 |
intestinal epithelium | 1.79e-10 | 9 |
simple columnar epithelium | 1.11e-08 | 11 |