FFCP PHASE1:Mm9::chr1:34530108..34530141,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=512 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:34530108..34530141,+ | |||
|description=CAGE_peak_at_chr1:34530108..34530141,+ | |description=CAGE_peak_at_chr1:34530108..34530141,+ | ||
|id=chr1:34530108..34530141,+ | |id=chr1:34530108..34530141,+ | ||
|ontology_enrichment_celltype=CL:0000988!4.12e-08!32;CL:0002032!4.12e-08!32;CL:0000037!4.12e-08!32;CL:0000566!4.12e-08!32;CL:0000837!4.12e-08!32;CL:0000049!7.26e-07!19 | |ontology_enrichment_celltype=CL:0000988!4.12e-08!32;CL:0002032!4.12e-08!32;CL:0000037!4.12e-08!32;CL:0000566!4.12e-08!32;CL:0000837!4.12e-08!32;CL:0000049!7.26e-07!19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.00e-16,19;CL:0002320,9.74e-13,46;CL:0000134,9.74e-13,46;CL:0000988,1.56e-12,32;CL:0002032,1.56e-12,32;CL:0000037,1.56e-12,32;CL:0000837,1.56e-12,32;CL:0000219,2.54e-10,54;CL:0000763,6.46e-10,16;CL:0002092,9.23e-10,3;CL:0002540,9.23e-10,3;CL:0000034,1.13e-07,97;CL:0000553,1.14e-07,6;CL:0000556,1.14e-07,6;CL:0000839,2.51e-07,13;CL:0002476,8.68e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.23e-13!70;UBERON:0002193!1.02e-11!48;UBERON:0002390!3.16e-10!45;UBERON:0003061!3.16e-10!45;UBERON:0002371!1.81e-09!16;UBERON:0001474!2.92e-08!22;UBERON:0004765!2.92e-08!22;UBERON:0001434!2.92e-08!22;UBERON:0003081!2.43e-07!88 | |ontology_enrichment_uberon=UBERON:0002405!2.23e-13!70;UBERON:0002193!1.02e-11!48;UBERON:0002390!3.16e-10!45;UBERON:0003061!3.16e-10!45;UBERON:0002371!1.81e-09!16;UBERON:0001474!2.92e-08!22;UBERON:0004765!2.92e-08!22;UBERON:0001434!2.92e-08!22;UBERON:0003081!2.43e-07!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.76e-19,16;UBERON:0001474,3.31e-16,22;UBERON:0004765,3.31e-16,22;UBERON:0001434,3.31e-16,22;UBERON:0002384,9.74e-13,46;UBERON:0002204,2.98e-12,32;UBERON:0002193,3.48e-11,48;UBERON:0002405,3.48e-11,48;UBERON:0002390,1.46e-10,45;UBERON:0003061,1.46e-10,45;UBERON:0002106,7.76e-07,6;UBERON:0004457,7.76e-07,6;UBERON:0000042,7.76e-07,6;UBERON:0004854,7.76e-07,6;UBERON:0009034,7.76e-07,6;UBERON:0002095,7.76e-07,6;UBERON:0004782,7.76e-07,6;UBERON:0003281,7.76e-07,6;UBERON:0009664,7.76e-07,6;UBERON:0002296,7.76e-07,6;UBERON:0005602,7.76e-07,6;UBERON:0001179,7.76e-07,6;UBERON:0006293,7.76e-07,6 | |||
|phase1_expression=0,0,0,0,0,0.671517087647559,0.467225281191051,0.774739940649458,0.140788722151667,0.234064526321993,0,0,0.684802919724823,0.0874204024189974,1.33243904726265,0.404950534779652,0.699561878128147,2.83915948822414,2.60517423850904,2.54633791078818,0.255129870453209,2.58156473122302,4.17919662622297,0.639969691173627,0.91763712426868,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0.418531630736908,0.7813353445238,1.57057123192139,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,0.672187598284928,0,0,0,0.202316460859598,0,0,0,0,3.1496490104849,6.92206453796882,4.2628806896766,0.599200221036809,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.45839474333043,0,0.142371680799103,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,1.29468941823586,0.148442139064825,0.173485326766136,0,0.230615497256059,0.452167921657868,0.117588707135705,0.125666591329675,0.247194967734374,1.01219549843938,1.76922110389975,0,0.883366073841574,0.484875253135222,1.86391761218122,0,0,0.255457055208591,9.94465533399138,5.99902730993408,5.97230067243404,0,0,0,0.347648640384553,0,0.20778804455956,0.162241263067758,0.203678727700633,1.24406970610093,0,0,0,0,0.180062129805349,0.452114453507145,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0.61734640922383,0.199034266818493,0.702213187313235,1.02939162845886,1.70498099637356,0,0,0.36012412292203,0,0,0,0,0,0.233530684734339,0,0.32833492815819,0.324275238183423,0.292399974850665,0,0.268412837520744,0,0,0.330418782983798,0,0,0,0.257734922644187,0,0,0,0.949058123089023,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.456994050438915,0,0,0,0,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0.889357881261447,0.333690211432188,0.589676985339609,0.449724224769707,0.202860121388503,0.72353147925725,0.50925170356284,0.863088412352432,0.810676133875177,1.37280706594041,0,1.11642284300551,0.624075346229121,0.252578877947112,0.358794827043824,0,1.29327233116623,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0.238043640886014,0,0.472905432318573,0.221464689648775,0.318909537314974,0.81931657357869,0.518054945597687,0.578596234326046,4.52373851817817,2.17562273527484,0.491764273019036,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0.220528398054962,0.32977250588296,0,0.301564624640779,0,0,0.291480836629851,0,1.02522528478712,0.619160603889667,1.11116716421827,1.50694765603753,1.0935538217682,0.915112692826091,4.24946074984638,4.89830083132803,4.97519905695926,0,0,0,0.108005340821801,0,0,0.404593039154462,0.165306911450672,0,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0.537080087002444,0.198681354781265,0.240390899039938,0.295379054349154,0.201932899896295,0.533447646584999,0.100826185136841,0.779663045918019,0.673482891482306,0.467507608726276,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.192909220463705,1.23625770240992,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0.355905054372522,0,0,0,0.192906610981141,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843 | |phase1_expression=0,0,0,0,0,0.671517087647559,0.467225281191051,0.774739940649458,0.140788722151667,0.234064526321993,0,0,0.684802919724823,0.0874204024189974,1.33243904726265,0.404950534779652,0.699561878128147,2.83915948822414,2.60517423850904,2.54633791078818,0.255129870453209,2.58156473122302,4.17919662622297,0.639969691173627,0.91763712426868,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0.418531630736908,0.7813353445238,1.57057123192139,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,0.672187598284928,0,0,0,0.202316460859598,0,0,0,0,3.1496490104849,6.92206453796882,4.2628806896766,0.599200221036809,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.45839474333043,0,0.142371680799103,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,1.29468941823586,0.148442139064825,0.173485326766136,0,0.230615497256059,0.452167921657868,0.117588707135705,0.125666591329675,0.247194967734374,1.01219549843938,1.76922110389975,0,0.883366073841574,0.484875253135222,1.86391761218122,0,0,0.255457055208591,9.94465533399138,5.99902730993408,5.97230067243404,0,0,0,0.347648640384553,0,0.20778804455956,0.162241263067758,0.203678727700633,1.24406970610093,0,0,0,0,0.180062129805349,0.452114453507145,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0,0.61734640922383,0.199034266818493,0.702213187313235,1.02939162845886,1.70498099637356,0,0,0.36012412292203,0,0,0,0,0,0.233530684734339,0,0.32833492815819,0.324275238183423,0.292399974850665,0,0.268412837520744,0,0,0.330418782983798,0,0,0,0.257734922644187,0,0,0,0.949058123089023,0.164698954724011,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.456994050438915,0,0,0,0,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0.889357881261447,0.333690211432188,0.589676985339609,0.449724224769707,0.202860121388503,0.72353147925725,0.50925170356284,0.863088412352432,0.810676133875177,1.37280706594041,0,1.11642284300551,0.624075346229121,0.252578877947112,0.358794827043824,0,1.29327233116623,0.189491411770485,0.325929952884052,0,0.234690248288502,0,0.238043640886014,0,0.472905432318573,0.221464689648775,0.318909537314974,0.81931657357869,0.518054945597687,0.578596234326046,4.52373851817817,2.17562273527484,0.491764273019036,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0.220528398054962,0.32977250588296,0,0.301564624640779,0,0,0.291480836629851,0,1.02522528478712,0.619160603889667,1.11116716421827,1.50694765603753,1.0935538217682,0.915112692826091,4.24946074984638,4.89830083132803,4.97519905695926,0,0,0,0.108005340821801,0,0,0.404593039154462,0.165306911450672,0,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0.537080087002444,0.198681354781265,0.240390899039938,0.295379054349154,0.201932899896295,0.533447646584999,0.100826185136841,0.779663045918019,0.673482891482306,0.467507608726276,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.192909220463705,1.23625770240992,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0.355905054372522,0,0,0,0.192906610981141,0,0,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr1:34530108..34530141,+ | |short_description=p@chr1:34530108..34530141,+ | ||
}} | }} |
Latest revision as of 14:19, 5 August 2015
Short description: | p@chr1:34530108..34530141, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:34530108..34530141, + |
Coexpression cluster: | MCL_coexpression_mm9:512 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.00e-16 | 19 |
connective tissue cell | 9.74e-13 | 46 |
mesenchymal cell | 9.74e-13 | 46 |
hematopoietic cell | 1.56e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.56e-12 | 32 |
hematopoietic stem cell | 1.56e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.56e-12 | 32 |
motile cell | 2.54e-10 | 54 |
myeloid cell | 6.46e-10 | 16 |
bone marrow cell | 9.23e-10 | 3 |
mesenchymal stem cell of the bone marrow | 9.23e-10 | 3 |
stem cell | 1.13e-07 | 97 |
megakaryocyte progenitor cell | 1.14e-07 | 6 |
megakaryocyte | 1.14e-07 | 6 |
myeloid lineage restricted progenitor cell | 2.51e-07 | 13 |
bone marrow macrophage | 8.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.76e-19 | 16 |
bone element | 3.31e-16 | 22 |
skeletal element | 3.31e-16 | 22 |
skeletal system | 3.31e-16 | 22 |
connective tissue | 9.74e-13 | 46 |
musculoskeletal system | 2.98e-12 | 32 |
hemolymphoid system | 3.48e-11 | 48 |
immune system | 3.48e-11 | 48 |
hematopoietic system | 1.46e-10 | 45 |
blood island | 1.46e-10 | 45 |
spleen | 7.76e-07 | 6 |
cavity lining | 7.76e-07 | 6 |
serous membrane | 7.76e-07 | 6 |
gastrointestinal system mesentery | 7.76e-07 | 6 |
stomach region | 7.76e-07 | 6 |
mesentery | 7.76e-07 | 6 |
gastrointestinal system serosa | 7.76e-07 | 6 |
mesentery of stomach | 7.76e-07 | 6 |
gut mesentery | 7.76e-07 | 6 |
dorsal mesentery | 7.76e-07 | 6 |
dorsal mesogastrium | 7.76e-07 | 6 |
peritoneal cavity | 7.76e-07 | 6 |
spleen primordium | 7.76e-07 | 6 |