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FFCP PHASE1:Mm9::chr1:52289825..52289842,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14660
|EntrezGene=14660
|HGNC=
|HGNC=
|MCL_coexpression_id=910
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-170bp_to_ENSMUST00000142976_5end
|association_with_transcript=-170bp_to_ENSMUST00000142976_5end
|cluster_id=chr1:52289825..52289842,-
|description=CAGE_peak_6_at_Gls_5end
|description=CAGE_peak_6_at_Gls_5end
|id=chr1:52289825..52289842,-
|id=chr1:52289825..52289842,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000624,9.51e-08,8;CL:0002610,2.23e-07,3;CL:0002614,2.35e-07,3;CL:0000893,3.90e-07,6;CL:0002489,3.90e-07,6;CL:0000898,3.90e-07,6;CL:0000809,3.90e-07,6;CL:0000810,3.90e-07,6;CL:0000895,3.90e-07,6;CL:0000808,3.90e-07,6;CL:0000894,3.90e-07,6;CL:0000806,3.90e-07,6;CL:0000807,3.90e-07,6;CL:0000805,3.90e-07,6;CL:0002425,3.90e-07,6;CL:0002436,3.90e-07,6;CL:0002427,3.90e-07,6;CL:0002428,3.90e-07,6;CL:0002429,3.90e-07,6;CL:0002433,3.90e-07,6;CL:0002431,3.90e-07,6;CL:0002432,3.90e-07,6;CL:0000791,7.67e-07,9;CL:0000789,7.67e-07,9;CL:0002420,7.67e-07,9;CL:0002419,7.67e-07,9;CL:0000790,7.67e-07,9;CL:0000838,8.69e-07,12
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000064!1.52e-11!99;UBERON:0000955!2.95e-09!50;UBERON:0006238!2.95e-09!50;UBERON:0002616!9.70e-09!49;UBERON:0002021!1.07e-08!10;UBERON:0000411!1.07e-08!10;UBERON:0001950!1.07e-08!10;UBERON:0001049!3.76e-07!52;UBERON:0005068!3.76e-07!52;UBERON:0006241!3.76e-07!52;UBERON:0007135!3.76e-07!52
|ontology_enrichment_uberon=UBERON:0000064!1.52e-11!99;UBERON:0000955!2.95e-09!50;UBERON:0006238!2.95e-09!50;UBERON:0002616!9.70e-09!49;UBERON:0002021!1.07e-08!10;UBERON:0000411!1.07e-08!10;UBERON:0001950!1.07e-08!10;UBERON:0001049!3.76e-07!52;UBERON:0005068!3.76e-07!52;UBERON:0006241!3.76e-07!52;UBERON:0007135!3.76e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.35e-25,10;UBERON:0000411,4.35e-25,10;UBERON:0001950,4.35e-25,10;UBERON:0000073,4.56e-21,54;UBERON:0000955,8.00e-21,47;UBERON:0006238,8.00e-21,47;UBERON:0003528,2.88e-19,29;UBERON:0002791,2.88e-19,29;UBERON:0001893,2.88e-19,29;UBERON:0002616,2.90e-19,46;UBERON:0003080,1.80e-18,40;UBERON:0002780,4.31e-17,39;UBERON:0001890,4.31e-17,39;UBERON:0006240,4.31e-17,39;UBERON:0002619,7.69e-17,17;UBERON:0001049,1.85e-16,52;UBERON:0005068,1.85e-16,52;UBERON:0006241,1.85e-16,52;UBERON:0007135,1.85e-16,52;UBERON:0002020,7.35e-16,34;UBERON:0000956,8.20e-16,21;UBERON:0001869,8.20e-16,21;UBERON:0000203,8.20e-16,21;UBERON:0001017,1.35e-15,73;UBERON:0001016,5.03e-15,75;UBERON:0003056,3.09e-14,49;UBERON:0002346,1.96e-12,64;UBERON:0003075,1.96e-12,64;UBERON:0007284,1.96e-12,64;UBERON:0004121,1.21e-10,95;UBERON:0000924,1.21e-10,95;UBERON:0006601,1.21e-10,95;UBERON:0010371,2.70e-10,73;UBERON:0002950,4.27e-09,4;UBERON:0001891,4.27e-09,4;UBERON:0009616,4.27e-09,4;UBERON:0010286,4.27e-09,4;UBERON:0010314,5.07e-08,92;UBERON:0004684,2.23e-07,3;UBERON:0002275,2.23e-07,3;UBERON:0002038,2.35e-07,3;UBERON:0009663,2.35e-07,3;UBERON:0009661,2.35e-07,3;UBERON:0000125,2.35e-07,3;UBERON:0002308,2.35e-07,3
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.60492842261366,0,0.16787927191189,0.700837921786577,1.16210991097419,7.74337971834167,9.59664557920173,2.22583358693156,1.7549874978974,0.171200729931206,0.34968160967599,0.666219523631325,0,0,0.788655413395594,1.09691546884591,0.42438965179803,1.10556277196391,0.0992909512008853,0.261199789138935,0,0.45881856213434,0.57423196411502,0,0.430942465371778,1.14014051673824,0.504060259519861,1.10865255327652,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0.7813353445238,0,0,0,0,0.755380907853464,0.608261587317087,0.734187008646726,0,0.218025156380447,0,0,0,0,1.00669563634642,0,0.672187598284928,0,0.286533439938757,1.03134418455488,0,0,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0,0,0,0,0,0,0.919218786610021,1.10115880999389,1.40456071893706,1.84327839907492,0,0.0914876436024097,0,1.11673199600552,1.12552522006336,1.83357897332172,0.589257170947335,0.427115042397309,0.186399445825301,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0.505524445014783,0.34255163915718,0.258937883647172,0,0,0,0,0.452167921657868,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0,0,0,1.86391761218122,0.585561594023094,0.41889341362691,0.766371165625774,0.599075622529601,0.599902730993408,0.508280908292259,1.04853447583376,5.49000723382352,0.502617408451458,5.56237824615285,5.37002460393694,1.0389402227978,2.92034273521964,0.101839363850316,0,0.252722758433675,0,0.130120442962704,0,0,0,0.136072998302656,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0.393528463494808,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,4.83666881697493,0.102904612379284,0.991256348951394,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0.432276099749388,0.796565093017469,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0.147610147979602,0.156998727841375,0.493588655687202,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.469380496577004,0,0,0,0,0.44292937929755,0,0.163863314715738,0,0,0,0,0.491764273019036,0,1.76605648986571,1.52375192569864,0.655739781506702,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,1.92792789853084,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0.882113592219848,0.49465875882444,0.161464426695906,0.0603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,0.18542530201051,0.683483523191411,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0.169978429993855,0.69975726161829,0.414599921413271,0,0.158167996790568,0,0,0,0,0.269728692769641,0.165306911450672,0,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.314578033277133,0,0,0.316011120628178,0,0.205421914329655,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0.906921534460845,0.221985953374065,0.179427713218951,0.335769232728157,0.19318959403219,0.563047426353546,0,0.214368379079066,0,4.51801474093653,2.76195141904306,3.43737308063638,4.64003592327956,8.22099023724771,6.7985450765073,7.42524750254986,5.85417564191487,5.89085131679466,7.24864436452548,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.252697211763798,0,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0.436039249896986,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0.214871054048298,0,0.220591419119515,0
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.60492842261366,0,0.16787927191189,0.700837921786577,1.16210991097419,7.74337971834167,9.59664557920173,2.22583358693156,1.7549874978974,0.171200729931206,0.34968160967599,0.666219523631325,0,0,0.788655413395594,1.09691546884591,0.42438965179803,1.10556277196391,0.0992909512008853,0.261199789138935,0,0.45881856213434,0.57423196411502,0,0.430942465371778,1.14014051673824,0.504060259519861,1.10865255327652,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0.7813353445238,0,0,0,0,0.755380907853464,0.608261587317087,0.734187008646726,0,0.218025156380447,0,0,0,0,1.00669563634642,0,0.672187598284928,0,0.286533439938757,1.03134418455488,0,0,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0,0,0,0,0,0,0.919218786610021,1.10115880999389,1.40456071893706,1.84327839907492,0,0.0914876436024097,0,1.11673199600552,1.12552522006336,1.83357897332172,0.589257170947335,0.427115042397309,0.186399445825301,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0.505524445014783,0.34255163915718,0.258937883647172,0,0,0,0,0.452167921657868,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0,0,0,1.86391761218122,0.585561594023094,0.41889341362691,0.766371165625774,0.599075622529601,0.599902730993408,0.508280908292259,1.04853447583376,5.49000723382352,0.502617408451458,5.56237824615285,5.37002460393694,1.0389402227978,2.92034273521964,0.101839363850316,0,0.252722758433675,0,0.130120442962704,0,0,0,0.136072998302656,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0.393528463494808,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,4.83666881697493,0.102904612379284,0.991256348951394,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0.432276099749388,0.796565093017469,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.126473074248515,0.147610147979602,0.156998727841375,0.493588655687202,0,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0.469380496577004,0,0,0,0,0.44292937929755,0,0.163863314715738,0,0,0,0,0.491764273019036,0,1.76605648986571,1.52375192569864,0.655739781506702,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,1.92792789853084,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0.23467170806371,0.21183207086382,0.882113592219848,0.49465875882444,0.161464426695906,0.0603129249281559,0.238744688006273,0.328281799490123,0.291480836629851,0.18542530201051,0.683483523191411,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0.169978429993855,0.69975726161829,0.414599921413271,0,0.158167996790568,0,0,0,0,0.269728692769641,0.165306911450672,0,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.314578033277133,0,0,0.316011120628178,0,0.205421914329655,0,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0.906921534460845,0.221985953374065,0.179427713218951,0.335769232728157,0.19318959403219,0.563047426353546,0,0.214368379079066,0,4.51801474093653,2.76195141904306,3.43737308063638,4.64003592327956,8.22099023724771,6.7985450765073,7.42524750254986,5.85417564191487,5.89085131679466,7.24864436452548,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0.252697211763798,0,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0.436039249896986,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0.214871054048298,0,0.220591419119515,0
|short_description=p6@Gls
|short_description=p6@Gls
}}
}}

Latest revision as of 05:05, 27 September 2015

Short description:p6@Gls
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Gls_5end
Coexpression cluster:MCL_coexpression_mm9:910
Association with transcript: -170bp_to_ENSMUST00000142976_5end
EntrezGene:Gls
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Gls

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D55.56
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CD4-positive, alpha-beta T cell9.51e-088
raphe nuclei neuron2.23e-073
neuron of the substantia nigra2.35e-073
thymocyte3.90e-076
double negative thymocyte3.90e-076
naive T cell3.90e-076
double-positive, alpha-beta thymocyte3.90e-076
CD4-positive, alpha-beta thymocyte3.90e-076
naive thymus-derived CD4-positive, alpha-beta T cell3.90e-076
DN4 thymocyte3.90e-076
DN1 thymic pro-T cell3.90e-076
DN2 thymocyte3.90e-076
DN3 thymocyte3.90e-076
immature single positive thymocyte3.90e-076
early T lineage precursor3.90e-076
mature CD4 single-positive thymocyte3.90e-076
resting double-positive thymocyte3.90e-076
double-positive blast3.90e-076
CD69-positive double-positive thymocyte3.90e-076
CD69-positive, CD4-positive single-positive thymocyte3.90e-076
CD4-positive, CD8-intermediate double-positive thymocyte3.90e-076
CD24-positive, CD4 single-positive thymocyte3.90e-076
mature alpha-beta T cell7.67e-079
alpha-beta T cell7.67e-079
immature T cell7.67e-079
mature T cell7.67e-079
immature alpha-beta T cell7.67e-079
lymphoid lineage restricted progenitor cell8.69e-0712

Uber anatomy
Ontology termp-valuen
occipital lobe4.35e-2510
visual cortex4.35e-2510
neocortex4.35e-2510
regional part of nervous system4.56e-2154
brain8.00e-2147
future brain8.00e-2147
brain grey matter2.88e-1929
regional part of telencephalon2.88e-1929
telencephalon2.88e-1929
regional part of brain2.90e-1946
anterior neural tube1.80e-1840
regional part of forebrain4.31e-1739
forebrain4.31e-1739
future forebrain4.31e-1739
regional part of cerebral cortex7.69e-1717
neural tube1.85e-1652
neural rod1.85e-1652
future spinal cord1.85e-1652
neural keel1.85e-1652
gray matter7.35e-1634
cerebral cortex8.20e-1621
cerebral hemisphere8.20e-1621
pallium8.20e-1621
central nervous system1.35e-1573
nervous system5.03e-1575
pre-chordal neural plate3.09e-1449
neurectoderm1.96e-1264
neural plate1.96e-1264
presumptive neural plate1.96e-1264
ectoderm-derived structure1.21e-1095
ectoderm1.21e-1095
presumptive ectoderm1.21e-1095
ecto-epithelium2.70e-1073
regional part of midbrain4.27e-094
midbrain4.27e-094
presumptive midbrain4.27e-094
midbrain neural tube4.27e-094
structure with developmental contribution from neural crest5.07e-0892
raphe nuclei2.23e-073
reticular formation2.23e-073
substantia nigra2.35e-073
telencephalic nucleus2.35e-073
midbrain nucleus2.35e-073
neural nucleus2.35e-073
nucleus of brain2.35e-073
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