FFCP PHASE1:Mm9::chr9:21936050..21936064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=122 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:21936050..21936064,- | |||
|description=CAGE_peak_at_chr9:21936050..21936064,- | |description=CAGE_peak_at_chr9:21936050..21936064,- | ||
|id=chr9:21936050..21936064,- | |id=chr9:21936050..21936064,- | ||
|ontology_enrichment_celltype=CL:0002031!1.75e-08!25;CL:0000988!3.22e-07!32;CL:0002032!3.22e-07!32;CL:0000037!3.22e-07!32;CL:0000566!3.22e-07!32;CL:0000837!3.22e-07!32;CL:0000791!3.47e-07!9;CL:0000789!3.47e-07!9;CL:0002420!3.47e-07!9;CL:0002419!3.47e-07!9;CL:0000790!3.47e-07!9;CL:0000838!4.05e-07!12 | |ontology_enrichment_celltype=CL:0002031!1.75e-08!25;CL:0000988!3.22e-07!32;CL:0002032!3.22e-07!32;CL:0000037!3.22e-07!32;CL:0000566!3.22e-07!32;CL:0000837!3.22e-07!32;CL:0000791!3.47e-07!9;CL:0000789!3.47e-07!9;CL:0002420!3.47e-07!9;CL:0002419!3.47e-07!9;CL:0000790!3.47e-07!9;CL:0000838!4.05e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.26e-12,25;CL:0000553,1.09e-11,6;CL:0000556,1.09e-11,6;CL:0000791,1.51e-09,9;CL:0000789,1.51e-09,9;CL:0002420,1.51e-09,9;CL:0002419,1.51e-09,9;CL:0000790,1.51e-09,9;CL:0000838,4.92e-09,12;CL:0000988,1.21e-08,32;CL:0002032,1.21e-08,32;CL:0000037,1.21e-08,32;CL:0000837,1.21e-08,32;CL:0000542,3.27e-08,13;CL:0000051,3.27e-08,13;CL:0002320,6.48e-08,46;CL:0000134,6.48e-08,46;CL:0000624,7.33e-08,8;CL:0000084,1.42e-07,11;CL:0000827,1.42e-07,11;CL:0000050,1.86e-07,9;CL:0000219,6.30e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.55e-23!48;UBERON:0002405!1.01e-22!70;UBERON:0002390!3.02e-21!45;UBERON:0003061!3.02e-21!45;UBERON:0004177!5.34e-15!29;UBERON:0005057!5.55e-14!51;UBERON:0003408!5.10e-12!24;UBERON:0002370!1.71e-11!23;UBERON:0000974!1.71e-11!23;UBERON:0004807!1.71e-11!23;UBERON:0005058!1.71e-11!23;UBERON:0003351!1.71e-11!23;UBERON:0009113!1.71e-11!23;UBERON:0003295!1.71e-11!23;UBERON:0009722!1.71e-11!23;UBERON:0005562!1.71e-11!23;UBERON:0007690!1.71e-11!23;UBERON:0006562!1.21e-10!24;UBERON:0001557!1.21e-10!24;UBERON:0001042!1.21e-10!24;UBERON:0008814!1.21e-10!24;UBERON:0009145!1.21e-10!24;UBERON:0001041!1.39e-10!92;UBERON:0000077!1.39e-10!97;UBERON:0003081!2.87e-10!88;UBERON:0004119!1.97e-09!130;UBERON:0000925!1.97e-09!130;UBERON:0006595!1.97e-09!130;UBERON:0001007!5.09e-09!128;UBERON:0001555!5.09e-09!128;UBERON:0007026!5.09e-09!128;UBERON:0002530!9.47e-09!65;UBERON:0000949!9.57e-09!72;UBERON:0000072!1.62e-08!27;UBERON:0000926!2.43e-08!193;UBERON:0004120!2.43e-08!193;UBERON:0006603!2.43e-08!193;UBERON:0002368!2.70e-08!60;UBERON:0001004!2.88e-08!42;UBERON:0004921!3.56e-08!126;UBERON:0004185!3.56e-08!126;UBERON:0000065!7.89e-08!41;UBERON:0003104!3.20e-07!131;UBERON:0009142!3.20e-07!131;UBERON:0002371!4.90e-07!16;UBERON:0005911!6.47e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.47e-36,48;UBERON:0002405,1.47e-36,48;UBERON:0002390,4.95e-32,45;UBERON:0003061,4.95e-32,45;UBERON:0004177,1.36e-24,29;UBERON:0005057,1.36e-24,29;UBERON:0003408,3.09e-22,24;UBERON:0002370,4.03e-21,23;UBERON:0000974,4.03e-21,23;UBERON:0004807,4.03e-21,23;UBERON:0005058,4.03e-21,23;UBERON:0003351,4.03e-21,23;UBERON:0009113,4.03e-21,23;UBERON:0003295,4.03e-21,23;UBERON:0009722,4.03e-21,23;UBERON:0005562,4.03e-21,23;UBERON:0007690,4.03e-21,23;UBERON:0006562,4.94e-20,24;UBERON:0001557,4.94e-20,24;UBERON:0001042,4.94e-20,24;UBERON:0008814,4.94e-20,24;UBERON:0009145,4.94e-20,24;UBERON:0000077,2.56e-19,35;UBERON:0000072,2.96e-17,27;UBERON:0001004,1.58e-14,42;UBERON:0000065,1.26e-13,41;UBERON:0003081,1.84e-13,87;UBERON:0007811,4.22e-13,36;UBERON:0000153,3.65e-10,43;UBERON:0001041,5.90e-09,80;UBERON:0001007,1.55e-08,116;UBERON:0001555,1.55e-08,116;UBERON:0007026,1.55e-08,116;UBERON:0002371,2.88e-08,16;UBERON:0004119,2.98e-08,118;UBERON:0000925,2.98e-08,118;UBERON:0006595,2.98e-08,118;UBERON:0002384,6.48e-08,46;UBERON:0000926,1.62e-07,120;UBERON:0004120,1.62e-07,120;UBERON:0006603,1.62e-07,120;UBERON:0004921,2.66e-07,114;UBERON:0003929,5.92e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,28.9236244509131,1.12630977721333,1.40438715793196,0.856089841127525,0.239316476986009,34.5825474461036,37.1536710280739,8.32774404539157,9.11138703254217,3.49780939064073,30.7575611224282,30.7136331276855,37.3462893582267,0.510259740906419,0.297872853602656,0,4.63978026100879,5.04700418347774,0,0,0,0.190023419456374,1.76421090831952,0.665191531965914,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,1.43752564364972,27.8519126055842,26.8383992544197,43.3561000893779,0,0.286533439938757,0,0,0,0,0,0,6.74924787961049,4.94433181283487,15.6305625288142,0.898800331555214,0.768436610643109,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0.52091337055676,0,0,0,0,0,0,0.151452386666368,0,0,0.860423876981386,0.679971333707751,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.48439043634778,8.54495016035667,0.890652834388949,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0.247194967734374,0.86759614151947,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,1.53274233125155,0,0,0.254140454146129,0,0,0,0,0,0,0,0,1.24406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0.492502392237286,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,1.79763881730844,1.08069024937347,0.398282546508734,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.608580364165509,0.72353147925725,0,0.575392274901621,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,1.84753190166605,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0.318909537314974,1.47476983244164,1.38147985492716,0.433947175744535,0,0,0.491764273019036,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.164970122972535,0,0,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0.363533729477506,0.356497378384721,1.26414703174326,0,1.03135543248187,0.680879211507576,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,1.1659233465194,0,6.83483523191411,0.412773735926445,0.925972636848558,2.0720530270516,4.78429797023588,5.71945433016307,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0.259229946583586,1.24267862617385,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0,0,7.58426689507628,2.43270258348197,1.95150818613172,2.33857481360031,3.22248052201467,6.75516606256301,6.25016337503838,6.94140777720513,6.25991989678515,5.48689007915999,7.86444244067356,8.47883562435846,8.65906574762965,6.54510652216786,0,0,0.0897138566094757,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0,0,0.412085900803307,0,0,0,0,0.290692833264657,0,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0.927471342481686 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|phase1_expression=0,0,0,0,0,0,0,28.9236244509131,1.12630977721333,1.40438715793196,0.856089841127525,0.239316476986009,34.5825474461036,37.1536710280739,8.32774404539157,9.11138703254217,3.49780939064073,30.7575611224282,30.7136331276855,37.3462893582267,0.510259740906419,0.297872853602656,0,4.63978026100879,5.04700418347774,0,0,0,0.190023419456374,1.76421090831952,0.665191531965914,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0.139986421625363,1.43752564364972,27.8519126055842,26.8383992544197,43.3561000893779,0,0.286533439938757,0,0,0,0,0,0,6.74924787961049,4.94433181283487,15.6305625288142,0.898800331555214,0.768436610643109,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0,0,0,0.52091337055676,0,0,0,0,0,0,0.151452386666368,0,0,0.860423876981386,0.679971333707751,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.48439043634778,8.54495016035667,0.890652834388949,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0.247194967734374,0.86759614151947,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,1.53274233125155,0,0,0.254140454146129,0,0,0,0,0,0,0,0,1.24406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0.492502392237286,0.162137619091711,0,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,1.79763881730844,1.08069024937347,0.398282546508734,0,0.228497025219458,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.608580364165509,0.72353147925725,0,0.575392274901621,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,1.84753190166605,0.189491411770485,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0.318909537314974,1.47476983244164,1.38147985492716,0.433947175744535,0,0,0.491764273019036,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.164970122972535,0,0,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0.363533729477506,0.356497378384721,1.26414703174326,0,1.03135543248187,0.680879211507576,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,1.1659233465194,0,6.83483523191411,0.412773735926445,0.925972636848558,2.0720530270516,4.78429797023588,5.71945433016307,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0.259229946583586,1.24267862617385,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0,0,0,7.58426689507628,2.43270258348197,1.95150818613172,2.33857481360031,3.22248052201467,6.75516606256301,6.25016337503838,6.94140777720513,6.25991989678515,5.48689007915999,7.86444244067356,8.47883562435846,8.65906574762965,6.54510652216786,0,0,0.0897138566094757,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0,0,0.412085900803307,0,0,0,0,0.290692833264657,0,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0.927471342481686 | ||
|short_description=p@chr9:21936050..21936064,- | |short_description=p@chr9:21936050..21936064,- | ||
}} | }} |
Latest revision as of 22:27, 4 August 2015
Short description: | p@chr9:21936050..21936064, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:21936050..21936064, - |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 4.26e-12 | 25 |
megakaryocyte progenitor cell | 1.09e-11 | 6 |
megakaryocyte | 1.09e-11 | 6 |
mature alpha-beta T cell | 1.51e-09 | 9 |
alpha-beta T cell | 1.51e-09 | 9 |
immature T cell | 1.51e-09 | 9 |
mature T cell | 1.51e-09 | 9 |
immature alpha-beta T cell | 1.51e-09 | 9 |
lymphoid lineage restricted progenitor cell | 4.92e-09 | 12 |
hematopoietic cell | 1.21e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.21e-08 | 32 |
hematopoietic stem cell | 1.21e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.21e-08 | 32 |
lymphocyte | 3.27e-08 | 13 |
common lymphoid progenitor | 3.27e-08 | 13 |
connective tissue cell | 6.48e-08 | 46 |
mesenchymal cell | 6.48e-08 | 46 |
CD4-positive, alpha-beta T cell | 7.33e-08 | 8 |
T cell | 1.42e-07 | 11 |
pro-T cell | 1.42e-07 | 11 |
megakaryocyte-erythroid progenitor cell | 1.86e-07 | 9 |
motile cell | 6.30e-07 | 54 |