FFCP PHASE1:Mm9::chr2:19310562..19310571,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:19310562..19310571,- | |||
|description=CAGE_peak_at_chr2:19310562..19310571,- | |description=CAGE_peak_at_chr2:19310562..19310571,- | ||
|id=chr2:19310562..19310571,- | |id=chr2:19310562..19310571,- | ||
|ontology_enrichment_celltype=CL:0000838!4.82e-11!12;CL:0000988!1.96e-10!32;CL:0002032!1.96e-10!32;CL:0000037!1.96e-10!32;CL:0000566!1.96e-10!32;CL:0000837!1.96e-10!32;CL:0000542!3.73e-10!13;CL:0000051!3.73e-10!13;CL:0000084!1.25e-08!11;CL:0000827!1.25e-08!11;CL:0000738!1.21e-07!17;CL:0002087!1.21e-07!17;CL:0000034!1.59e-07!97;CL:0000791!4.25e-07!9;CL:0000789!4.25e-07!9;CL:0002420!4.25e-07!9;CL:0002419!4.25e-07!9;CL:0000790!4.25e-07!9;CL:0002320!9.02e-07!46;CL:0000134!9.02e-07!46 | |ontology_enrichment_celltype=CL:0000838!4.82e-11!12;CL:0000988!1.96e-10!32;CL:0002032!1.96e-10!32;CL:0000037!1.96e-10!32;CL:0000566!1.96e-10!32;CL:0000837!1.96e-10!32;CL:0000542!3.73e-10!13;CL:0000051!3.73e-10!13;CL:0000084!1.25e-08!11;CL:0000827!1.25e-08!11;CL:0000738!1.21e-07!17;CL:0002087!1.21e-07!17;CL:0000034!1.59e-07!97;CL:0000791!4.25e-07!9;CL:0000789!4.25e-07!9;CL:0002420!4.25e-07!9;CL:0002419!4.25e-07!9;CL:0000790!4.25e-07!9;CL:0002320!9.02e-07!46;CL:0000134!9.02e-07!46 | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.64e-15,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.17e-13!3;DOID:4045!2.17e-13!3;DOID:0050686!6.70e-07!6 | |ontology_enrichment_disease=DOID:0060100!2.17e-13!3;DOID:4045!2.17e-13!3;DOID:0050686!6.70e-07!6 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.58e-44,3;DOID:4045,4.58e-44,3;DOID:0050686,1.60e-22,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!9.02e-07!46 | |ontology_enrichment_uberon=UBERON:0002384!9.02e-07!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.64e-15,9;UBERON:0002036,2.64e-15,9;UBERON:0002385,2.64e-15,9;UBERON:0000486,2.64e-15,9;UBERON:0007503,2.64e-15,9;UBERON:0001015,2.64e-15,9;UBERON:0002329,2.64e-15,9;UBERON:0003082,2.64e-15,9;UBERON:0003059,2.64e-15,9;UBERON:0007282,2.64e-15,9;UBERON:0004290,2.64e-15,9;UBERON:0009618,2.64e-15,9;UBERON:0000383,7.43e-14,10;UBERON:0007524,1.14e-12,11;UBERON:0003077,1.14e-12,11;UBERON:0007285,1.14e-12,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0,0.159544317990673,0,0.34968160967599,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,5.4693474116666,2.61761871986899,11.7646297606203,1.36609096991689,3.39857247121808,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.559805809294632,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0,0.159544317990673,0,0.34968160967599,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,5.4693474116666,2.61761871986899,11.7646297606203,1.36609096991689,3.39857247121808,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.559805809294632,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:19310562..19310571,- | |short_description=p@chr2:19310562..19310571,- | ||
}} | }} |
Latest revision as of 18:56, 4 August 2015
Short description: | p@chr2:19310562..19310571, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:19310562..19310571, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.64e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.64e-15 | 9 |
striated muscle tissue | 2.64e-15 | 9 |
muscle tissue | 2.64e-15 | 9 |
multilaminar epithelium | 2.64e-15 | 9 |
epithelial vesicle | 2.64e-15 | 9 |
musculature | 2.64e-15 | 9 |
somite | 2.64e-15 | 9 |
myotome | 2.64e-15 | 9 |
presomitic mesoderm | 2.64e-15 | 9 |
presumptive segmental plate | 2.64e-15 | 9 |
dermomyotome | 2.64e-15 | 9 |
trunk paraxial mesoderm | 2.64e-15 | 9 |
musculature of body | 7.43e-14 | 10 |
dense mesenchyme tissue | 1.14e-12 | 11 |
paraxial mesoderm | 1.14e-12 | 11 |
presumptive paraxial mesoderm | 1.14e-12 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.58e-44 | 3 |
muscle cancer | 4.58e-44 | 3 |
organ system cancer | 1.60e-22 | 6 |