FFCP PHASE1:Hg19::chr13:95118885..95118894,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:95118885..95118894,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_at_chr13:95118885..95118894,- | |description=CAGE_peak_at_chr13:95118885..95118894,- | ||
|id=chr13:95118885..95118894,- | |id=chr13:95118885..95118894,- | ||
|ontology_enrichment_celltype=CL:0000147!2.26e-28!14;CL:0000148!6.31e-28!10;CL:0000541!6.31e-28!10;CL:0000710!5.82e-14!20;CL:0002566!1.11e-12!1;CL:0000333!4.36e-12!41;CL:0000075!2.55e-10!27;CL:0000325!5.66e-10!39;CL:0000453!1.16e-09!5;CL:0002077!2.02e-08!33;CL:0000133!2.52e-08!59;CL:0000221!7.62e-07!71 | |ontology_enrichment_celltype=CL:0000147!2.26e-28!14;CL:0000148!6.31e-28!10;CL:0000541!6.31e-28!10;CL:0000710!5.82e-14!20;CL:0002566!1.11e-12!1;CL:0000333!4.36e-12!41;CL:0000075!2.55e-10!27;CL:0000325!5.66e-10!39;CL:0000453!1.16e-09!5;CL:0002077!2.02e-08!33;CL:0000133!2.52e-08!59;CL:0000221!7.62e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002566;2.21e-40;1!CL:0000148;3.44e-36;10!CL:0000147;3.76e-26;14!CL:0000710;1.34e-18;20!CL:0000075;5.18e-14;27!CL:0002077;9.49e-10;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,3.30e-40,1;CL:0000148,3.88e-36,10;CL:0000541,3.88e-36,10;CL:0000147,4.10e-26,14;CL:0000710,1.42e-18,20;CL:0000075,5.42e-14,27;CL:0002077,2.76e-11,34;CL:0000333,4.33e-09,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!4.83e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.81e-21;2!DOID:5409;3.42e-11;4!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.81e-21,2;DOID:5409,3.10e-11,4;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.33e-20!5;UBERON:0005388!1.33e-20!5;UBERON:0001802!1.33e-20!5;UBERON:0000970!3.62e-09!20;UBERON:0002104!9.69e-09!21;UBERON:0000020!5.39e-08!23;UBERON:0001032!1.14e-07!24;UBERON:0004456!1.14e-07!24 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr13:95118885..95118894,- | |short_description=p@chr13:95118885..95118894,- | ||
}} | }} |
Latest revision as of 17:29, 24 July 2015
Short description: | p@chr13:95118885..95118894, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:95118885..95118894, - |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 3.30e-40 | 1 |
melanocyte | 3.88e-36 | 10 |
melanoblast | 3.88e-36 | 10 |
pigment cell | 4.10e-26 | 14 |
neurecto-epithelial cell | 1.42e-18 | 20 |
columnar/cuboidal epithelial cell | 5.42e-14 | 27 |
ecto-epithelial cell | 2.76e-11 | 34 |
migratory neural crest cell | 4.33e-09 | 41 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.81e-21 | 2 |
lung small cell carcinoma | 3.10e-11 | 4 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |