FFCP PHASE1:Hg19::chr14:106938501..106938524,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=20169 | |HGNC=20169 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_ENST00000334298_5end | |association_with_transcript=27bp_to_ENST00000334298_5end | ||
|cluster_id=chr14:106938501..106938524,+ | |||
|description=CAGE_peak_2_at_LINC00221_5end | |description=CAGE_peak_2_at_LINC00221_5end | ||
|id=chr14:106938501..106938524,+ | |id=chr14:106938501..106938524,+ | ||
|ontology_enrichment_celltype=CL:0000054!2.99e-09!2;CL:0000137!2.99e-09!2;CL:0000092!2.99e-09!2;CL:0000039!3.75e-09!7;CL:0000586!3.75e-09!7 | |ontology_enrichment_celltype=CL:0000054!2.99e-09!2;CL:0000137!2.99e-09!2;CL:0000092!2.99e-09!2;CL:0000039!3.75e-09!7;CL:0000586!3.75e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000054;2.72e-14;2!CL:0000137;2.72e-14;2!CL:0000092;2.72e-14;2!CL:0002553;1.41e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.22e-14,2;CL:0000137,2.22e-14,2;CL:0000092,2.22e-14,2;CL:0002553,1.31e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.40e-13!235;DOID:14566!6.66e-13!239;DOID:0050687!6.04e-12!143;DOID:200!2.99e-09!2;DOID:4305!2.99e-09!2;DOID:1036!1.34e-08!8;DOID:3095!4.89e-08!22;DOID:2994!4.89e-08!22;DOID:169!9.09e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:200;2.72e-14;2!DOID:4305;2.72e-14;2!DOID:1036;5.64e-14;8!DOID:0060085;5.43e-08;1!DOID:3165;5.43e-08;1!DOID:0060121;5.43e-08;1!DOID:2438;5.43e-08;1!DOID:4418;5.43e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:200,2.22e-14,2;DOID:4305,2.22e-14,2;DOID:1036,6.58e-14,8;DOID:162,2.59e-11,235;DOID:14566,5.48e-11,239;DOID:0050687,4.04e-08,143;DOID:0060085,5.43e-08,1;DOID:3165,5.43e-08,1;DOID:0060121,5.43e-08,1;DOID:2438,5.43e-08,1;DOID:4418,5.43e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000013!4.79e-08!5;UBERON:0002410!4.79e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.41e-08;1!UBERON:0001282;1.95e-08;1!UBERON:0009842;1.95e-08;1!UBERON:0003704;1.95e-08;1!UBERON:0001171;1.95e-08;1!UBERON:0001172;1.95e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.41e-08,1;UBERON:0001282,1.88e-08,1;UBERON:0009842,1.88e-08,1;UBERON:0003704,1.88e-08,1;UBERON:0001171,1.88e-08,1;UBERON:0001172,1.88e-08,1 | |||
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| ||
|short_description=p2@LINC00221 | |short_description=p2@LINC00221 | ||
}} | }} |
Latest revision as of 22:42, 18 September 2015
Short description: | p2@LINC00221 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LINC00221_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000334298_5end |
EntrezGene: | NA |
HGNC: | 20169 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.22e-14 | 2 |
osteocyte | 2.22e-14 | 2 |
osteoclast | 2.22e-14 | 2 |
lung fibroblast | 1.31e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.41e-08 | 1 |
intralobular bile duct | 1.88e-08 | 1 |
acinus | 1.88e-08 | 1 |
intrahepatic bile duct | 1.88e-08 | 1 |
portal lobule | 1.88e-08 | 1 |
hepatic acinus | 1.88e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 2.22e-14 | 2 |
bone giant cell tumor | 2.22e-14 | 2 |
chronic leukemia | 6.58e-14 | 8 |
cancer | 2.59e-11 | 235 |
disease of cellular proliferation | 5.48e-11 | 239 |
cell type cancer | 4.04e-08 | 143 |
organ system benign neoplasm | 5.43e-08 | 1 |
skin benign neoplasm | 5.43e-08 | 1 |
integumentary system benign neoplasm | 5.43e-08 | 1 |
dermis tumor | 5.43e-08 | 1 |
cutaneous fibrous histiocytoma | 5.43e-08 | 1 |