FFCP PHASE1:Hg19::chr10:27037479..27037487,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:27037479..27037487,- | |||
|description=CAGE_peak_at_chr10:27037479..27037487,- | |description=CAGE_peak_at_chr10:27037479..27037487,- | ||
|id=chr10:27037479..27037487,- | |id=chr10:27037479..27037487,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000569;4.46e-17;4!CL:0002539;3.88e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,5.29e-17,4;CL:0000011,5.29e-17,4;CL:0002539,3.13e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000011;4.46e-17;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.13e-08;1!UBERON:0004237;3.88e-07;10!UBERON:0004695;3.88e-07;10!UBERON:0002111;3.88e-07;10!UBERON:0004178;3.88e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.06e-08,1;UBERON:0004237,3.13e-07,10;UBERON:0004695,3.13e-07,10;UBERON:0002111,3.13e-07,10;UBERON:0004178,3.13e-07,10 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0.331397375727916,1.34465029290355,0,1.46062018077475,0.975865597581014,0.246242116153576,0.408001382488506,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0.822335776043652,0.929119112685311,0.863077176966451,0.512321413058201,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0.545812300115692,0.449446968890169,0.306083892370903,0.641858054152187,0,0,0.797854630486527,0.426224750532694,1.16083695451434,2.26954089876456,0,0.75374599577023,0,0.217188844705117,1.21079900526674,0,0.632924774881769,0.422510572623884,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,1.76171156811282,0,0,2.24203425192614,0,0.590129310341499,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0.222820913770347,0.589211814949674,0.443067789167242,0.270803863765016,0.512365278902701,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0.535081656179426,0,0,0,0,0,0.318565414324097,0,0,1.50575119077773,2.30375900077953,0,0,0,0.201606743224732,0.802320587350522,0.579297615531196,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.0654895377488563,0.364295288292542,0,0.324547393654683,0.348259474598534,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,3.87780264148325,0,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0,0.67355336034844,0.490385709340376,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0.245668634623536,0.206651562351531,0,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0.423863802319124,1.20036438433761,0.824420233907511,0.772921620136887,0,0.337552664482532,0.584622030967192,0.757301322732344,0.0920498986422993,0.80823028409406,0.355009592516614,0.403008392910561,0.169560592310488,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0.984868024349589,0.234004265139238,0.594524649154913,0,0,0.425325291727159,0.179117045405697,0,0,0.492663237895943,0.176096868026452,0,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0,0.571652865261156,0.336393253036082,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0.862510299438069,0.385029108839245,0.254094624222463,1.30139853857622,0,0,0.637938751653163,0.749007023947182,0,0,0,0,0.542530047399471,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0.413536052245775,0,0.106727557803444,0,0,0,0.248107807818777,0.306923946576125,1.12264037773229,0.256278298511402,0,0,0,0.308419387605311,0.532685175939381,0.0821271560138091,0,0.697262270759755,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0.0915694648183434,0,0.574265537996172,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.170453254832202,0.0890320356467374,0,0.576570202095319,0.382838137483752,0.10115778085555,0.929691098594572,1.25924938732256,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0.842516912477962,0,0,0,0.9554993798559,0,0,0,0,0.876901770507525,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0,0,0,1.64647446479951,0,0,0.288666338176536,0,0,0.0941438007767792,0.43050537267123,0,0,0,2.53723804616085,0,0,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0.684704037099577,0,0,0.169291777801603,0.1605880751037,0.605399121573143,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0,0.146508179271894,0.121360521749513,0.222886768554957,0,0,0,2.45728561679386,0,0,0.333926115068718,0,0.211125408127993,0,0,0.503865495708552,0,0,0,0.0898683511473268,0.537063524026827,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.438770794307945,0.10893846351899,0.139423744278603,0.0769502585037971,0.341826167541004,0.23056390438806,0.179515288819544,0.217294743844016,0,0.183195186803725,2.66517388009317,1.02193298195737,0.156980256395025,0.332423363800313,0,0,0,0.37950746544837,0,0.210998064528027,0,0.282706142867882,0,0.995261931078505,0,0.611030144933625,0.296521128680622,0.370691816839509,0.208843899010911,0,0,0.234264445725339,0.182454789215666,0.19566461893209,0,0,0,0,0.063186579628488,0.450970258243478,0.103688191397247,0,0,0,0,0,0.416024019039416,0.173559738335131,0.0979923974143777,0.261177619741208,0.34945333648406,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0.193978032976839,0.0882561266915003,0,0,0.794858446811959,0,0.391102765469606,0,0,0,0,0,0.343189995723929,0.288109595976299,0,0,0,0,0.101998217636322,0,0,0.410716136675979,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.134366944973453,0.360299883542404,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0.272406812223151,0,0,0,0.449947783103001,0,0.0607495566580247,0,0,0,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0.320362237703084,0.628817220398664,0,0,0.197611631897944,0,1.27668251554036,0,0,0,0.327872630709804,0,0,0.488105059607853,0,0.573409195690071,0.110929051536852,0,0,0,0.151649117541648,0,0,0.468334905806882,0,0.74627401443437,0.467426619694449,0.554805861502613,1.32582103692562,0,0.889811221596536,1.14420034198462,1.36107831386915,0.932623203496683,1.18284119991707,0.159296767163702,0,0.621051827505038,0.414706207840855,0.265841714557995,0,0.901545653983311,0,0.813741466409323,0.727394636810238,0.859284456339908,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0.438568099157414,0,0,0.337884881306145,0,0,0,0.414775308455192,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0.509197589862076,0.425149840203366,0.247871528518004,0,0.318004350653419,0.157723490002507,0,0,0,0.0642292250964595,0,0.478901577171454,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0.196295437002051,0,0.183428598521679,0.115525666150338,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0.295712172434091,0,0.781078098613847,0.413373593002368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.628462359664008,0.840816489941367,0,0.215927591218621,0.9555033757741,0,0.47404083519818,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0.223710863595585,0.392600934460972,0,0,0.102662806856247,0,0.971421986118279,0,0,0.118920090777569,0.22589216407792,0,0,0.231522474323834,0,0,0,0,0.392616934229891,0,0,0.339854229375634,0,0,0,0.178553938605658,0,0.320965466756673,0,0.458729283404541,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0.305966489225945,0,0.551369397209069,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0.124149428591716,0.224263725161227,0.0636471582781649,0,0,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0.213454691755431,0,0,0,0.366724332548599,0,0,0,0.320568492303233 | |phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0.331397375727916,1.34465029290355,0,1.46062018077475,0.975865597581014,0.246242116153576,0.408001382488506,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0.822335776043652,0.929119112685311,0.863077176966451,0.512321413058201,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0.545812300115692,0.449446968890169,0.306083892370903,0.641858054152187,0,0,0.797854630486527,0.426224750532694,1.16083695451434,2.26954089876456,0,0.75374599577023,0,0.217188844705117,1.21079900526674,0,0.632924774881769,0.422510572623884,0,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,1.76171156811282,0,0,2.24203425192614,0,0.590129310341499,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0.222820913770347,0.589211814949674,0.443067789167242,0.270803863765016,0.512365278902701,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0.535081656179426,0,0,0,0,0,0.318565414324097,0,0,1.50575119077773,2.30375900077953,0,0,0,0.201606743224732,0.802320587350522,0.579297615531196,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.0654895377488563,0.364295288292542,0,0.324547393654683,0.348259474598534,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,3.87780264148325,0,0.496971951695318,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0,0.67355336034844,0.490385709340376,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0.245668634623536,0.206651562351531,0,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0.423863802319124,1.20036438433761,0.824420233907511,0.772921620136887,0,0.337552664482532,0.584622030967192,0.757301322732344,0.0920498986422993,0.80823028409406,0.355009592516614,0.403008392910561,0.169560592310488,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0.984868024349589,0.234004265139238,0.594524649154913,0,0,0.425325291727159,0.179117045405697,0,0,0.492663237895943,0.176096868026452,0,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0,0.571652865261156,0.336393253036082,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0.862510299438069,0.385029108839245,0.254094624222463,1.30139853857622,0,0,0.637938751653163,0.749007023947182,0,0,0,0,0.542530047399471,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0.413536052245775,0,0.106727557803444,0,0,0,0.248107807818777,0.306923946576125,1.12264037773229,0.256278298511402,0,0,0,0.308419387605311,0.532685175939381,0.0821271560138091,0,0.697262270759755,0,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0.15403067420883,0,0,0.105551628892876,1.13733384070897,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0.0915694648183434,0,0.574265537996172,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0.290033387828457,0.170453254832202,0.0890320356467374,0,0.576570202095319,0.382838137483752,0.10115778085555,0.929691098594572,1.25924938732256,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0.842516912477962,0,0,0,0.9554993798559,0,0,0,0,0.876901770507525,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0,0,0,1.64647446479951,0,0,0.288666338176536,0,0,0.0941438007767792,0.43050537267123,0,0,0,2.53723804616085,0,0,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0.684704037099577,0,0,0.169291777801603,0.1605880751037,0.605399121573143,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0,0.146508179271894,0.121360521749513,0.222886768554957,0,0,0,2.45728561679386,0,0,0.333926115068718,0,0.211125408127993,0,0,0.503865495708552,0,0,0,0.0898683511473268,0.537063524026827,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.438770794307945,0.10893846351899,0.139423744278603,0.0769502585037971,0.341826167541004,0.23056390438806,0.179515288819544,0.217294743844016,0,0.183195186803725,2.66517388009317,1.02193298195737,0.156980256395025,0.332423363800313,0,0,0,0.37950746544837,0,0.210998064528027,0,0.282706142867882,0,0.995261931078505,0,0.611030144933625,0.296521128680622,0.370691816839509,0.208843899010911,0,0,0.234264445725339,0.182454789215666,0.19566461893209,0,0,0,0,0.063186579628488,0.450970258243478,0.103688191397247,0,0,0,0,0,0.416024019039416,0.173559738335131,0.0979923974143777,0.261177619741208,0.34945333648406,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0.193978032976839,0.0882561266915003,0,0,0.794858446811959,0,0.391102765469606,0,0,0,0,0,0.343189995723929,0.288109595976299,0,0,0,0,0.101998217636322,0,0,0.410716136675979,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.134366944973453,0.360299883542404,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0,0.272406812223151,0,0,0,0.449947783103001,0,0.0607495566580247,0,0,0,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0.320362237703084,0.628817220398664,0,0,0.197611631897944,0,1.27668251554036,0,0,0,0.327872630709804,0,0,0.488105059607853,0,0.573409195690071,0.110929051536852,0,0,0,0.151649117541648,0,0,0.468334905806882,0,0.74627401443437,0.467426619694449,0.554805861502613,1.32582103692562,0,0.889811221596536,1.14420034198462,1.36107831386915,0.932623203496683,1.18284119991707,0.159296767163702,0,0.621051827505038,0.414706207840855,0.265841714557995,0,0.901545653983311,0,0.813741466409323,0.727394636810238,0.859284456339908,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0.438568099157414,0,0,0.337884881306145,0,0,0,0.414775308455192,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0,0.861074898304078,0,0,0,0,0,0,0,0,0.509197589862076,0.425149840203366,0.247871528518004,0,0.318004350653419,0.157723490002507,0,0,0,0.0642292250964595,0,0.478901577171454,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0.196295437002051,0,0.183428598521679,0.115525666150338,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0.295712172434091,0,0.781078098613847,0.413373593002368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.628462359664008,0.840816489941367,0,0.215927591218621,0.9555033757741,0,0.47404083519818,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0.223710863595585,0.392600934460972,0,0,0.102662806856247,0,0.971421986118279,0,0,0.118920090777569,0.22589216407792,0,0,0.231522474323834,0,0,0,0,0.392616934229891,0,0,0.339854229375634,0,0,0,0.178553938605658,0,0.320965466756673,0,0.458729283404541,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0.305966489225945,0,0.551369397209069,0,0,0,0,0.20686599172379,0,0.23806443146374,0,0.124149428591716,0.224263725161227,0.0636471582781649,0,0,0,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0.213454691755431,0,0,0,0.366724332548599,0,0,0,0.320568492303233 | ||
|short_description=p@chr10:27037479..27037487,- | |short_description=p@chr10:27037479..27037487,- | ||
}} | }} |
Latest revision as of 12:51, 23 July 2015
Short description: | p@chr10:27037479..27037487, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:27037479..27037487, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 5.29e-17 | 4 |
migratory trunk neural crest cell | 5.29e-17 | 4 |
aortic smooth muscle cell | 3.13e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.06e-08 | 1 |
blood vessel smooth muscle | 3.13e-07 | 10 |
arterial system smooth muscle | 3.13e-07 | 10 |
artery smooth muscle tissue | 3.13e-07 | 10 |
aorta smooth muscle tissue | 3.13e-07 | 10 |