FFCP PHASE1:Hg19::chr14:27067428..27067485,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4857 | |EntrezGene=4857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7886 | |HGNC=7886 | ||
|TSSclassifier=strong | |||
|UniProt=P51513,D3DS81 | |UniProt=P51513,D3DS81 | ||
|association_with_transcript=-468bp_to_ENST00000539517,NM_002515,NM_006489,NM_006491,uc001wpy.2,uc001wpz.2,uc001wqa.2,uc001wqb.2_5end | |association_with_transcript=-468bp_to_ENST00000539517,NM_002515,NM_006489,NM_006491,uc001wpy.2,uc001wpz.2,uc001wqa.2,uc001wqb.2_5end | ||
|cluster_id=chr14:27067428..27067485,- | |||
|coexpression_cluster_id=C3419 | |||
|description=CAGE_peak_2_at_NOVA1_5end | |description=CAGE_peak_2_at_NOVA1_5end | ||
|id=chr14:27067428..27067485,- | |id=chr14:27067428..27067485,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.59e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.41e-37!94;UBERON:0001016!3.41e-37!94;UBERON:0005743!3.92e-37!86;UBERON:0003075!3.22e-36!86;UBERON:0007284!3.22e-36!86;UBERON:0001017!3.97e-36!82;UBERON:0002346!1.76e-35!90;UBERON:0001049!3.62e-35!57;UBERON:0005068!3.62e-35!57;UBERON:0006241!3.62e-35!57;UBERON:0007135!3.62e-35!57;UBERON:0002616!5.13e-32!59;UBERON:0000955!6.37e-31!69;UBERON:0006238!6.37e-31!69;UBERON:0000119!2.25e-30!312;UBERON:0000483!5.07e-30!309;UBERON:0007023!4.05e-27!115;UBERON:0003056!4.34e-27!61;UBERON:0000033!1.06e-26!123;UBERON:0003080!1.58e-26!42;UBERON:0004121!4.92e-26!169;UBERON:0000924!5.24e-26!173;UBERON:0006601!5.24e-26!173;UBERON:0002780!5.93e-26!41;UBERON:0001890!5.93e-26!41;UBERON:0006240!5.93e-26!41;UBERON:0000475!7.31e-26!365;UBERON:0000153!1.56e-25!129;UBERON:0007811!1.56e-25!129;UBERON:0000025!6.11e-24!194;UBERON:0000481!3.55e-23!347;UBERON:0002020!1.44e-22!34;UBERON:0003528!1.44e-22!34;UBERON:0001893!1.47e-22!34;UBERON:0004111!4.39e-22!241;UBERON:0002791!7.17e-22!33;UBERON:0000477!2.60e-21!286;UBERON:0001869!3.44e-21!32;UBERON:0000956!1.15e-16!25;UBERON:0000203!1.15e-16!25;UBERON:0002619!7.54e-16!22;UBERON:0000468!1.29e-15!659;UBERON:0000922!2.07e-15!612;UBERON:0001950!1.35e-14!20;UBERON:0002050!2.02e-13!605;UBERON:0005423!2.02e-13!605;UBERON:0000923!3.82e-13!604;UBERON:0005291!3.82e-13!604;UBERON:0006598!3.82e-13!604;UBERON:0002532!3.82e-13!604;UBERON:0000467!7.15e-13!625;UBERON:0000480!1.18e-12!626;UBERON:0000064!4.09e-11!219;UBERON:0003076!1.18e-09!15;UBERON:0003057!1.18e-09!15;UBERON:0004732!2.37e-08!13;UBERON:0004733!8.12e-08!12;UBERON:0002028!8.12e-08!12;UBERON:0007277!8.12e-08!12;UBERON:0002308!2.31e-07!9;UBERON:0000125!2.31e-07!9;UBERON:0002420!2.58e-07!9;UBERON:0007245!2.58e-07!9;UBERON:0010009!2.58e-07!9;UBERON:0010011!2.58e-07!9;UBERON:0000454!2.58e-07!9;UBERON:0000062!3.96e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.99e-21;34!UBERON:0003528;2.65e-21;34!UBERON:0002020;2.65e-21;34!UBERON:0002791;3.47e-21;32!UBERON:0001869;3.69e-21;32!UBERON:0000073;8.19e-21;53!UBERON:0002616;8.19e-21;53!UBERON:0002780;8.96e-21;41!UBERON:0001890;8.96e-21;41!UBERON:0000956;2.53e-18;25!UBERON:0000203;2.53e-18;25!UBERON:0002619;1.96e-17;22!UBERON:0001950;4.93e-16;20!UBERON:0001017;1.62e-15;75!UBERON:0000955;1.16e-14;68!UBERON:0001016;2.87e-14;83!UBERON:0004732;3.17e-09;13!UBERON:0004733;1.21e-08;12!UBERON:0002028;1.21e-08;12!UBERON:0010314;1.98e-08;132!UBERON:0007023;3.88e-08;114!UBERON:0000125;5.02e-08;9!UBERON:0002308;5.02e-08;9!UBERON:0002420;5.78e-08;9!UBERON:0007245;5.78e-08;9!UBERON:0010009;5.78e-08;9!UBERON:0010011;5.78e-08;9!UBERON:0000454;5.78e-08;9!UBERON:0011216;1.06e-07;132!UBERON:0002680;9.04e-07;9!UBERON:0001895;9.04e-07;9 | |||
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| ||
|short_description=p2@NOVA1 | |short_description=p2@NOVA1 | ||
}} | }} |
Latest revision as of 15:55, 19 September 2015
Short description: | p2@NOVA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NOVA1_5end |
Coexpression cluster: | C3419_cerebellum_colon_medial_parietal_middle_occipital_testis |
Association with transcript: | -468bp_to_ENST00000539517, NM_002515, NM_006489, NM_006491, uc001wpy.2, uc001wpz.2, uc001wqa.2, uc001wqb.2_5end |
EntrezGene: | NOVA1 |
HGNC: | 7886 |
UniProt: | P51513D3DS81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data