FFCP PHASE1:Hg19::chr10:42863485..42863496,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441666 | |EntrezGene=441666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_024380,uc010qey.1_5end | |association_with_transcript=0bp_to_NR_024380,uc010qey.1_5end | ||
|cluster_id=chr10:42863485..42863496,- | |||
|description=CAGE_peak_4_at_LOC441666_5end | |description=CAGE_peak_4_at_LOC441666_5end | ||
|id=chr10:42863485..42863496,- | |id=chr10:42863485..42863496,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.28e-14;7!CL:0000586;2.28e-14;7!CL:0000222;3.40e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.89e-14,7;CL:0000586,3.89e-14,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.33e-10;10!UBERON:0005564;4.33e-10;10!UBERON:0003056;9.00e-09;3!UBERON:0005425;3.40e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;1.33e-12;22!DOID:2994;1.33e-12;22!DOID:3371;3.40e-07;1!DOID:4549;3.40e-07;1!DOID:5861;3.40e-07;1!DOID:6496;3.40e-07;1!DOID:1036;3.91e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.19e-12,22;DOID:2994,2.19e-12,22;DOID:3371,3.41e-07,1;DOID:4549,3.41e-07,1;DOID:5861,3.41e-07,1;DOID:6496,3.41e-07,1;DOID:1036,3.45e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.97e-22!57;UBERON:0005068!2.97e-22!57;UBERON:0006241!2.97e-22!57;UBERON:0007135!2.97e-22!57;UBERON:0002780!5.64e-22!41;UBERON:0001890!5.64e-22!41;UBERON:0006240!5.64e-22!41;UBERON:0002616!3.63e-21!59;UBERON:0003080!4.01e-21!42;UBERON:0002020!9.32e-21!34;UBERON:0003528!9.32e-21!34;UBERON:0001893!2.37e-20!34;UBERON:0007023!2.55e-20!115;UBERON:0002791!8.53e-20!33;UBERON:0003075!9.06e-20!86;UBERON:0007284!9.06e-20!86;UBERON:0001869!3.65e-19!32;UBERON:0000955!4.42e-19!69;UBERON:0006238!4.42e-19!69;UBERON:0002346!5.17e-19!90;UBERON:0000073!7.32e-19!94;UBERON:0001016!7.32e-19!94;UBERON:0001017!1.28e-17!82;UBERON:0005743!8.68e-17!86;UBERON:0003056!1.16e-15!61;UBERON:0002619!2.74e-14!22;UBERON:0000956!7.78e-14!25;UBERON:0000203!7.78e-14!25;UBERON:0001950!1.09e-12!20;UBERON:0004121!4.80e-11!169;UBERON:0000924!7.45e-11!173;UBERON:0006601!7.45e-11!173;UBERON:0000153!4.16e-10!129;UBERON:0007811!4.16e-10!129;UBERON:0000033!5.55e-10!123;UBERON:0002420!6.33e-09!9;UBERON:0007245!6.33e-09!9;UBERON:0010009!6.33e-09!9;UBERON:0010011!6.33e-09!9;UBERON:0000454!6.33e-09!9;UBERON:0002308!1.19e-08!9;UBERON:0000125!1.19e-08!9;UBERON:0009663!3.85e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.37e-12;8!UBERON:0003135;3.52e-09;11!UBERON:0000996;1.27e-07;1!UBERON:0001874;3.40e-07;1!UBERON:0000941;3.40e-07;1!UBERON:0001785;3.40e-07;1!UBERON:0002464;3.40e-07;1!UBERON:0004904;3.40e-07;1!UBERON:0001021;3.40e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.19e-12,8;UBERON:0003135,4.90e-09,11;UBERON:0000996,1.12e-07,1;UBERON:0000941,2.52e-07,1;UBERON:0001785,2.52e-07,1;UBERON:0002464,2.52e-07,1;UBERON:0004904,2.52e-07,1;UBERON:0001021,2.52e-07,1;UBERON:0003902,2.52e-07,1;UBERON:0005425,2.52e-07,1;UBERON:0001874,4.08e-07,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.448346041655403,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,1.92495971052672,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.223676107892416,0.834245708559542,0,0,1.23087398947712,0.811367035427949,0,0,0,0.293016358543788,1.69904730449319,0.334330152832435,0,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.984685914873589,0.445234820091624,0,0.211125408127993,0,0,0,0,0.369254416383208,0,0,0,0,0.197286811273867,0,0,0,0.463840490809256,0,1.04171104434093,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.482385754501632,0,0.221158519862449,1.47773809476774,0.219385397153973,0,0,0.230850775511391,0.227884111694002,0.46112780877612,0,0.434589487688032,0,0,0.533034776018635,0,0.31396051279005,0.498635045700469,0.451191321234361,1.56850027454192,1.51039428278258,1.13852239634511,0.158936578980379,0,0.163232808159148,0,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0.242780379534093,0.789168805698781,0,1.22429104652196,0,0,0.103688191397247,0,0,0.313932918407225,1.19472429772959,0.569219092059585,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0,1.412098027064,0.451961481561065,0.685209623233754,0.397429223405979,0.696418755514666,0.391102765469606,0.160317640503067,0.640358984218058,0,0,0.343609788497747,0.686379991447858,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0,0.600420288709789,0.684526894459965,0,0,0,0.279282401272254,0.458320848023367,0,0,0.429226048136571,0.223171457441873,0.201550417460179,0,2.32991899054908,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0.550157746388935,0.415440338029185,0.2249738915515,0,0.364497339948148,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0,0,0.646414781807753,0.52893040697076,0,0,0,0.314408610199332,0.414239055347196,0,0.395223263795889,0,0.638341257770182,0,0.2506898940227,0,0,0.628216385000937,0.886068179966986,0.976210119215705,0.3755727921195,0,0.554645257684261,0.248385611765534,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0,0,0,1.26184898228651,0.385239660814607,0.214441591374926,0,0,0,0.734210113519403,0,0,0,0.176689145945881,0,0.337884881306145,0.76872455576384,0,0.303859956177382,0.553033744606923,0,0,0,0,0,0,0,0,0.688859918643263,1.70254786070051,0,0,0,1.15104934173287,0,0.471797825567689,1.20130602011215,0,0,0,0,0,0,0,0,0.3062454773532,0.834979926253974,1.41696576325585,0.798169295285756,0.205116364240755,1.26035848110859,0.276629009856872,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0.327543835020193,0,0.337687923091973,0,0.413373593002368,0.19024743058172,0.546974809018219,0,0.992422356778588,0.527613733078862,0,0.535701835878287,3.02655349996942,0,0.455324382702595,0.177404740325278,0.230467975111559,0,1.01954599465248,0.855046056317038,0.118193840883968,0.444925607568277,0.235479278551542,1.25692471932802,0.280272163313789,0,0.431855182437243,0,0.285906176706625,1.42212250559454,1.0461728283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| ||
|short_description=p4@LOC441666 | |short_description=p4@LOC441666 | ||
}} | }} |
Latest revision as of 05:22, 18 September 2015
Short description: | p4@LOC441666 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC441666_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_024380, uc010qey.1_5end |
EntrezGene: | LOC441666 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.89e-14 | 7 |
germ cell | 3.89e-14 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 2.19e-12 | 8 |
male reproductive organ | 4.90e-09 | 11 |
vagina | 1.12e-07 | 1 |
cranial nerve II | 2.52e-07 | 1 |
cranial nerve | 2.52e-07 | 1 |
nerve trunk | 2.52e-07 | 1 |
nerve connecting eye with brain | 2.52e-07 | 1 |
nerve | 2.52e-07 | 1 |
retinal neural layer | 2.52e-07 | 1 |
presumptive neural retina | 2.52e-07 | 1 |
putamen | 4.08e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.19e-12 | 22 |
germ cell cancer | 2.19e-12 | 22 |
chondrosarcoma | 3.41e-07 | 1 |
extraosseous chondrosarcoma | 3.41e-07 | 1 |
myxoid chondrosarcoma | 3.41e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 3.41e-07 | 1 |
chronic leukemia | 3.45e-07 | 8 |