FFCP PHASE1:Mm9::chr6:30701694..30701705,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=145 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:30701694..30701705,+ | |||
|description=CAGE_peak_at_chr6:30701694..30701705,+ | |description=CAGE_peak_at_chr6:30701694..30701705,+ | ||
|id=chr6:30701694..30701705,+ | |id=chr6:30701694..30701705,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.88e-07!23;CL:0000337!1.88e-07!23 | |ontology_enrichment_celltype=CL:0000117!1.88e-07!23;CL:0000337!1.88e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.62e-07,3;CL:0002610,9.60e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.10e-13!52;UBERON:0005068!6.10e-13!52;UBERON:0006241!6.10e-13!52;UBERON:0007135!6.10e-13!52;UBERON:0002616!1.56e-12!49;UBERON:0000955!4.67e-12!50;UBERON:0006238!4.67e-12!50;UBERON:0000033!3.69e-11!63;UBERON:0002020!1.61e-10!34;UBERON:0002346!1.81e-10!71;UBERON:0003075!1.81e-10!71;UBERON:0007284!1.81e-10!71;UBERON:0002021!2.67e-10!10;UBERON:0000411!2.67e-10!10;UBERON:0001950!2.67e-10!10;UBERON:0003056!3.20e-10!49;UBERON:0000025!3.95e-10!114;UBERON:0001017!5.19e-10!73;UBERON:0005743!5.19e-10!73;UBERON:0003080!1.43e-09!40;UBERON:0000073!2.08e-09!75;UBERON:0001016!2.08e-09!75;UBERON:0002780!3.70e-09!39;UBERON:0001890!3.70e-09!39;UBERON:0006240!3.70e-09!39;UBERON:0002791!1.37e-08!29;UBERON:0003528!1.37e-08!29;UBERON:0001893!1.37e-08!29;UBERON:0004111!2.17e-08!122 | |ontology_enrichment_uberon=UBERON:0001049!6.10e-13!52;UBERON:0005068!6.10e-13!52;UBERON:0006241!6.10e-13!52;UBERON:0007135!6.10e-13!52;UBERON:0002616!1.56e-12!49;UBERON:0000955!4.67e-12!50;UBERON:0006238!4.67e-12!50;UBERON:0000033!3.69e-11!63;UBERON:0002020!1.61e-10!34;UBERON:0002346!1.81e-10!71;UBERON:0003075!1.81e-10!71;UBERON:0007284!1.81e-10!71;UBERON:0002021!2.67e-10!10;UBERON:0000411!2.67e-10!10;UBERON:0001950!2.67e-10!10;UBERON:0003056!3.20e-10!49;UBERON:0000025!3.95e-10!114;UBERON:0001017!5.19e-10!73;UBERON:0005743!5.19e-10!73;UBERON:0003080!1.43e-09!40;UBERON:0000073!2.08e-09!75;UBERON:0001016!2.08e-09!75;UBERON:0002780!3.70e-09!39;UBERON:0001890!3.70e-09!39;UBERON:0006240!3.70e-09!39;UBERON:0002791!1.37e-08!29;UBERON:0003528!1.37e-08!29;UBERON:0001893!1.37e-08!29;UBERON:0004111!2.17e-08!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.21e-16,10;UBERON:0000411,6.21e-16,10;UBERON:0001950,6.21e-16,10;UBERON:0002020,1.39e-14,34;UBERON:0002619,2.46e-12,17;UBERON:0000073,3.92e-12,54;UBERON:0003528,2.10e-11,29;UBERON:0002791,2.10e-11,29;UBERON:0001893,2.10e-11,29;UBERON:0000956,7.68e-10,21;UBERON:0001869,7.68e-10,21;UBERON:0000203,7.68e-10,21;UBERON:0001049,6.32e-09,52;UBERON:0005068,6.32e-09,52;UBERON:0006241,6.32e-09,52;UBERON:0007135,6.32e-09,52;UBERON:0001017,2.07e-08,73;UBERON:0002780,3.79e-08,39;UBERON:0001890,3.79e-08,39;UBERON:0006240,3.79e-08,39;UBERON:0001016,3.96e-08,75;UBERON:0003080,6.53e-08,40;UBERON:0002257,2.62e-07,3;UBERON:0002346,6.43e-07,64;UBERON:0003075,6.43e-07,64;UBERON:0007284,6.43e-07,64;UBERON:0004684,9.60e-07,3;UBERON:0002275,9.60e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0,0,0,1.10115880999389,0.893811366596314,1.68967186581868,0.263772575460388,0.0914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,3.51435969886663,9.1334861496837,2.70506193518296,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,0,1.25654352112864,0,1.53429274398198,0.62336413367868,0.648965052271031,0.305518091550949,0,0,0,0.260240885925407,0,0,0.452114453507145,0.476255494059295,0.896796041993948,0.187403449119458,0,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0.469052119962192,0,0,0.196764231747404,0.462801338662135,0.697601834251224,0.268273401399619,0.700592054203017,0.493679549740441,1.31333971263276,0,0,0.219550115291051,0.134206418760372,0,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0.814605311381257,0.581857461502877,1.26244475802573,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.810676133875177,0.274561413188081,2.87536413054709,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0.469380496577004,0,0,1.17080188714679,0.157635144106191,0.44292937929755,0.159454768657487,0.491589944147214,0,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0.404593039154462,0.247960367176008,0,0,0,0,0,0,0,0,0.337912250981556,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.6942555278512,0.460325236507177,3.43737308063638,3.60891682921744,0.685082519770642,1.5107877947794,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0.103787347584177,0,0,0,0.419226325255965,0,0.222246727801615,0,0,0.252697211763798,0,0,0.749132059759059,0.256100609619477,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0,0.441596760403192,0.342869252385415,1.06485483695602,0.476872379894642,0,0.0941093804153306,0.338458431566706,0.548783918618318,0.526139422875686,1.22223702461276,0,0.593175090620871,0.788035859004508,0,0.619747364743864,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0,0,0,1.10115880999389,0.893811366596314,1.68967186581868,0.263772575460388,0.0914876436024097,0.52091337055676,0.279182999001381,0.56276261003168,3.51435969886663,9.1334861496837,2.70506193518296,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,0,1.25654352112864,0,1.53429274398198,0.62336413367868,0.648965052271031,0.305518091550949,0,0,0,0.260240885925407,0,0,0.452114453507145,0.476255494059295,0.896796041993948,0.187403449119458,0,0,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0.469052119962192,0,0,0.196764231747404,0.462801338662135,0.697601834251224,0.268273401399619,0.700592054203017,0.493679549740441,1.31333971263276,0,0,0.219550115291051,0.134206418760372,0,1.44066457330998,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0.814605311381257,0.581857461502877,1.26244475802573,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.810676133875177,0.274561413188081,2.87536413054709,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0.469380496577004,0,0,1.17080188714679,0.157635144106191,0.44292937929755,0.159454768657487,0.491589944147214,0,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0,0.404593039154462,0.247960367176008,0,0,0,0,0,0,0,0,0.337912250981556,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,1.6942555278512,0.460325236507177,3.43737308063638,3.60891682921744,0.685082519770642,1.5107877947794,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0.103787347584177,0,0,0,0.419226325255965,0,0.222246727801615,0,0,0.252697211763798,0,0,0.749132059759059,0.256100609619477,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0,0.441596760403192,0.342869252385415,1.06485483695602,0.476872379894642,0,0.0941093804153306,0.338458431566706,0.548783918618318,0.526139422875686,1.22223702461276,0,0.593175090620871,0.788035859004508,0,0.619747364743864,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr6:30701694..30701705,+ | |short_description=p@chr6:30701694..30701705,+ | ||
}} | }} |
Latest revision as of 13:43, 5 August 2015
Short description: | p@chr6:30701694..30701705, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:30701694..30701705, + |
Coexpression cluster: | MCL_coexpression_mm9:145 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.62e-07 | 3 |
raphe nuclei neuron | 9.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.21e-16 | 10 |
visual cortex | 6.21e-16 | 10 |
neocortex | 6.21e-16 | 10 |
gray matter | 1.39e-14 | 34 |
regional part of cerebral cortex | 2.46e-12 | 17 |
regional part of nervous system | 3.92e-12 | 54 |
brain grey matter | 2.10e-11 | 29 |
regional part of telencephalon | 2.10e-11 | 29 |
telencephalon | 2.10e-11 | 29 |
cerebral cortex | 7.68e-10 | 21 |
cerebral hemisphere | 7.68e-10 | 21 |
pallium | 7.68e-10 | 21 |
neural tube | 6.32e-09 | 52 |
neural rod | 6.32e-09 | 52 |
future spinal cord | 6.32e-09 | 52 |
neural keel | 6.32e-09 | 52 |
central nervous system | 2.07e-08 | 73 |
regional part of forebrain | 3.79e-08 | 39 |
forebrain | 3.79e-08 | 39 |
future forebrain | 3.79e-08 | 39 |
nervous system | 3.96e-08 | 75 |
anterior neural tube | 6.53e-08 | 40 |
ventral horn of spinal cord | 2.62e-07 | 3 |
neurectoderm | 6.43e-07 | 64 |
neural plate | 6.43e-07 | 64 |
presumptive neural plate | 6.43e-07 | 64 |
raphe nuclei | 9.60e-07 | 3 |
reticular formation | 9.60e-07 | 3 |