FFCP PHASE1:Hg19::chr10:81205747..81205762,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:81205747..81205762,+ | |||
|description=CAGE_peak_at_chr10:81205747..81205762,+ | |description=CAGE_peak_at_chr10:81205747..81205762,+ | ||
|id=chr10:81205747..81205762,+ | |id=chr10:81205747..81205762,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.78e-07!180 | |ontology_enrichment_celltype=CL:0000055!1.78e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.85e-09;5!CL:0000346;9.12e-09;3!CL:1000428;9.12e-09;3!CL:0002559;9.29e-09;5!CL:0002603;3.06e-08;3!CL:0002575;6.57e-07;2!CL:0000669;6.72e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.38e-10,5;CL:0002028,8.38e-10,5;CL:0002559,4.84e-09,5;CL:0000346,5.05e-09,3;CL:1000428,5.05e-09,3;CL:0002603,5.10e-08,3;CL:0002575,5.64e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.51e-11!82;UBERON:0005743!1.84e-10!86;UBERON:0001049!2.96e-10!57;UBERON:0005068!2.96e-10!57;UBERON:0006241!2.96e-10!57;UBERON:0007135!2.96e-10!57;UBERON:0002346!6.90e-10!90;UBERON:0000073!6.94e-10!94;UBERON:0001016!6.94e-10!94;UBERON:0002616!2.65e-09!59;UBERON:0003075!5.03e-09!86;UBERON:0007284!5.03e-09!86;UBERON:0000955!8.06e-08!69;UBERON:0006238!8.06e-08!69;UBERON:0007023!1.44e-07!115;UBERON:0000924!2.80e-07!173;UBERON:0006601!2.80e-07!173;UBERON:0002020!5.42e-07!34;UBERON:0003528!5.42e-07!34;UBERON:0002780!6.54e-07!41;UBERON:0001890!6.54e-07!41;UBERON:0006240!6.54e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;9.12e-09;3!UBERON:0001992;9.12e-09;3!UBERON:0002073;9.29e-09;5!UBERON:0000125;2.72e-07;9!UBERON:0002308;2.72e-07;9!UBERON:0004732;7.58e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,4.64e-12,104;UBERON:0001049,8.30e-12,56;UBERON:0005068,8.30e-12,56;UBERON:0006241,8.30e-12,56;UBERON:0007135,8.30e-12,56;UBERON:0003075,1.05e-11,82;UBERON:0007284,1.05e-11,82;UBERON:0002346,6.90e-11,86;UBERON:0010314,8.84e-10,132;UBERON:0000073,9.97e-10,53;UBERON:0002616,9.97e-10,53;UBERON:0001017,1.33e-09,81;UBERON:0001016,4.09e-09,89;UBERON:0002073,4.84e-09,5;UBERON:0005086,4.84e-09,5;UBERON:0000412,5.05e-09,3;UBERON:0001992,5.05e-09,3;UBERON:0003076,5.47e-08,15;UBERON:0003057,5.47e-08,15;UBERON:0004121,9.14e-08,171;UBERON:0000924,9.14e-08,171;UBERON:0006601,9.14e-08,171;UBERON:0000955,1.23e-07,68;UBERON:0006238,1.23e-07,68;UBERON:0000125,2.46e-07,9;UBERON:0002308,2.46e-07,9;UBERON:0004732,8.22e-07,13 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.281908808191942,0,0.893922188854576,0,0,0,0.783556884599516,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,1.23121058076788,1.02000345622126,1.56727360739044,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.401088894940283,0.868043482863407,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0.727752183563449,0,0.411167888021826,0.309706370895104,0,0.512321413058201,0,0.689491361473237,0,2.70852973188684,0.188242339542605,0,0.449446968890169,0,0.641858054152187,0.639337125799041,0,0,0,0.290209238628584,0.56738522469114,1.24564449799115,0.502497330513487,0,0.65156653411535,0,0,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0.977766799900771,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.604820229674197,1.33720097891754,0.434473211648397,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0.795285947051099,0,0.472674085820339,1.10864698731282,0.702678285545008,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0,0,0,0.357198913136319,0,0.450445921933289,0,0.949265659568129,0,1.31780417436063,0,0,0,0.25326102332916,0.926864265692532,0.860509862246441,0.354668382198357,0.560677600142307,1.06748995729705,0,1.8672662123986,0.269421344139376,0.653847612453835,2.27036141467397,0,0,0,0.570471821544449,0.298897361103602,0.352303495931295,0.161872944368132,0.561803226808994,0.408308342509787,0.122834317311768,0.619954687054593,1.18800285728205,0.494533858557114,0,0,0.336672227908132,0.375355559615893,0.277064115484183,0.438977620880838,0,0.300476117813194,0.113432183160021,0.717558542755448,0.427114777637135,1.48352330811693,0.900273288253207,0.412210116953756,0.515281080091258,0.558350568994769,1.35021065793013,0.487185025805993,0.252433774244115,1.10459878370759,0.969876340912871,0,0.403008392910561,0.508681776931463,0.193260853163297,0,0,0.243947412259191,0,0.232387885739037,0.414644220061482,0,0.36497735907583,1.56449532329816,3.21620469096443,1.38134921352481,1.39310378409594,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0.982827216677626,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,0.352193736052904,2.48793738648926,1.8735593944205,4.03975786964416,0,0.763976851116555,1.17217447210047,1.71072446022705,0.411309970813294,0,0.571652865261156,1.12131084345361,1.30788020649984,0.51336800074665,0,0,0,0.797814349754612,2.08014873822732,0,1.41849132023278,0.532844358032199,0.142977993658148,0.542621605391443,1.64648067356154,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0.336255431980582,0.788123040807709,0.431255149719035,1.02674429023799,0.254094624222463,1.30139853857622,0.773288812777695,0,1.27587750330633,0,0,0.414415513436035,0.36807447515742,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.35142424497814,0,0,1.03473071292505,0,0.184369168541703,0.521301686808497,2.34961388955289,2.74514739048685,0.413536052245775,0.431428401637234,0.106727557803444,0.303127571446259,0,0,0,0.460385919864187,0,0.128139149255701,0,0,0,0.462629081407967,0,0.328508624055237,0,0.116210378459959,0,0,0,0.459257792658427,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0.256450125116389,0,0,1.33953315142039,0,0,0,0,1.6068392984416,0.096670718292122,0.616194468458578,1.07452572308291,0.275673144969061,0.751941714077915,0.725083469571143,0.170453254832202,0.178064071293475,0,0,0,0,0,0.94443704049192,0,0.616067160352178,0,0,0.18532421910392,0,0.744316738719335,0,0.571890581771475,0.767693373934002,0.855877976067841,0.636406495851874,0,1.07923474549989,0.274537029736055,0.353437207037059,0.202182481573316,0,0.421258456238981,0.48763373908959,0,0,0.409499734223957,0.565621727814851,1.13008116620243,0.551365343546124,0,0,1.15755106853338,0.655894752046633,0.405820753925408,0.30982349809975,0,0.143411352204052,0,0,0,0,0.658589785919804,0.75894634753143,0.699869440489966,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,1.29694662238543,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0.556812347790485,0,0,0,0,0,0.439524537815682,0,0.445773537109913,0.284136146806413,0,0,0,0,0.562677665642051,0.111308705022906,0.16480387422676,0.63337622438398,0.597743964753209,0.276283915531148,0,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0.291604613383254,0.173624994933292,0.885741385813839,0.241192877250816,0,0.331737779793674,0,0.438770794307945,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| ||
|short_description=p@chr10:81205747..81205762,+ | |short_description=p@chr10:81205747..81205762,+ | ||
}} | }} |
Latest revision as of 16:03, 23 July 2015
Short description: | p@chr10:81205747..81205762, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:81205747..81205762, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.38e-10 | 5 |
basophil mast progenitor cell | 8.38e-10 | 5 |
hair follicle cell | 4.84e-09 | 5 |
hair follicle dermal papilla cell | 5.05e-09 | 3 |
stem cell of epidermis | 5.05e-09 | 3 |
astrocyte of the cerebellum | 5.10e-08 | 3 |
central nervous system pericyte | 5.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 4.64e-12 | 104 |
neural tube | 8.30e-12 | 56 |
neural rod | 8.30e-12 | 56 |
future spinal cord | 8.30e-12 | 56 |
neural keel | 8.30e-12 | 56 |
neural plate | 1.05e-11 | 82 |
presumptive neural plate | 1.05e-11 | 82 |
neurectoderm | 6.90e-11 | 86 |
structure with developmental contribution from neural crest | 8.84e-10 | 132 |
regional part of nervous system | 9.97e-10 | 53 |
regional part of brain | 9.97e-10 | 53 |
central nervous system | 1.33e-09 | 81 |
nervous system | 4.09e-09 | 89 |
hair follicle | 4.84e-09 | 5 |
hair follicle placode | 4.84e-09 | 5 |
dermal papilla | 5.05e-09 | 3 |
papillary layer of dermis | 5.05e-09 | 3 |
posterior neural tube | 5.47e-08 | 15 |
chordal neural plate | 5.47e-08 | 15 |
ectoderm-derived structure | 9.14e-08 | 171 |
ectoderm | 9.14e-08 | 171 |
presumptive ectoderm | 9.14e-08 | 171 |
brain | 1.23e-07 | 68 |
future brain | 1.23e-07 | 68 |
neural nucleus | 2.46e-07 | 9 |
nucleus of brain | 2.46e-07 | 9 |
segmental subdivision of nervous system | 8.22e-07 | 13 |