FFCP PHASE1:Hg19::chr15:36653709..36653720,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:36653709..36653720,- | |||
|description=CAGE_peak_at_chr15:36653709..36653720,- | |description=CAGE_peak_at_chr15:36653709..36653720,- | ||
|id=chr15:36653709..36653720,- | |id=chr15:36653709..36653720,- | ||
|ontology_enrichment_celltype=CL:0000650!3.31e-08!3;CL:1000618!3.31e-08!3;CL:1001318!3.31e-08!3;CL:0002173!3.31e-08!3;CL:1000500!3.31e-08!3;CL:1000612!1.43e-07!7;CL:1000746!1.43e-07!7 | |ontology_enrichment_celltype=CL:0000650!3.31e-08!3;CL:1000618!3.31e-08!3;CL:1001318!3.31e-08!3;CL:0002173!3.31e-08!3;CL:1000500!3.31e-08!3;CL:1000612!1.43e-07!7;CL:1000746!1.43e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002188;2.91e-27;5!CL:1000746;8.22e-20;7!CL:1000612;8.22e-20;7!CL:0000243;2.94e-18;15!CL:0000125;2.94e-18;15!CL:0000095;1.99e-16;17!CL:0002681;5.22e-12;12!CL:0002584;5.22e-12;12!CL:0002319;8.46e-12;25!CL:1000449;8.28e-10;15!CL:1000497;9.07e-09;17!CL:0002518;9.07e-09;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.72e-27,5;CL:1000746,7.84e-20,7;CL:1000612,7.84e-20,7;CL:0000243,2.85e-18,15;CL:0000125,2.85e-18,15;CL:0000030,2.85e-18,15;CL:0000339,2.85e-18,15;CL:0000095,1.94e-16,17;CL:0000123,1.94e-16,17;CL:0002681,5.08e-12,12;CL:0002584,5.08e-12,12;CL:0002319,8.31e-12,25;CL:1000449,8.10e-10,15;CL:1000497,8.90e-09,17;CL:0002518,8.90e-09,17;CL:0000333,1.11e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.02e-27;10!CL:0000339;2.94e-18;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;1.73e-25;11!DOID:5409;1.57e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.66e-25,11;DOID:5409,1.70e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0003567!3.31e-08!3;UBERON:0003838!3.31e-08!3;UBERON:0005169!3.31e-08!3;UBERON:0002321!3.31e-08!3;UBERON:0005215!3.31e-08!3;UBERON:0002303!3.31e-08!3;UBERON:0002319!3.31e-08!3;UBERON:0002203!3.61e-08!6;UBERON:0001768!3.61e-08!6;UBERON:0001950!5.62e-08!20;UBERON:0000074!1.43e-07!7;UBERON:0001229!1.43e-07!7;UBERON:0001230!1.43e-07!7;UBERON:0005749!1.43e-07!7;UBERON:0004199!1.43e-07!7;UBERON:0004209!1.43e-07!7;UBERON:0004198!1.43e-07!7;UBERON:0002619!3.10e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;8.22e-20;7!UBERON:0001229;8.22e-20;7!UBERON:0001225;5.22e-12;12!UBERON:0008987;5.22e-12;12!UBERON:0001851;8.28e-10;15!UBERON:0006555;8.28e-10;15!UBERON:0000353;8.28e-10;15!UBERON:0004819;8.28e-10;15!UBERON:0001285;8.28e-10;15!UBERON:0007684;8.28e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,7.84e-20,7;UBERON:0000074,7.84e-20,7;UBERON:0001229,7.84e-20,7;UBERON:0001230,7.84e-20,7;UBERON:0003220,7.84e-20,7;UBERON:0005749,7.84e-20,7;UBERON:0004199,7.84e-20,7;UBERON:0004209,7.84e-20,7;UBERON:0004198,7.84e-20,7;UBERON:0005103,1.71e-17,8;UBERON:0000083,1.71e-17,8;UBERON:0009201,1.71e-17,8;UBERON:0006553,1.71e-17,8;UBERON:0003074,1.71e-17,8;UBERON:0003060,1.71e-17,8;UBERON:0000080,1.13e-15,9;UBERON:0002120,1.13e-15,9;UBERON:0004875,1.13e-15,9;UBERON:0005721,1.13e-15,9;UBERON:0005754,1.13e-15,9;UBERON:0007297,1.13e-15,9;UBERON:0004876,5.10e-13,11;UBERON:0001225,5.08e-12,12;UBERON:0008987,5.08e-12,12;UBERON:0003887,5.08e-12,12;UBERON:0001851,8.10e-10,15;UBERON:0004211,8.10e-10,15;UBERON:0009773,8.10e-10,15;UBERON:0000353,8.10e-10,15;UBERON:0001231,8.10e-10,15;UBERON:0001285,8.10e-10,15;UBERON:0007684,8.10e-10,15;UBERON:0004208,8.10e-10,15;UBERON:0006555,2.89e-09,16;UBERON:0004819,2.89e-09,16;UBERON:0000058,5.94e-08,19 | |||
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|short_description=p@chr15:36653709..36653720,- | |short_description=p@chr15:36653709..36653720,- | ||
}} | }} |
Latest revision as of 01:03, 25 July 2015
Short description: | p@chr15:36653709..36653720, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:36653709..36653720, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.72e-27 | 5 |
glomerular cell | 7.84e-20 | 7 |
kidney corpuscule cell | 7.84e-20 | 7 |
glial cell (sensu Vertebrata) | 2.85e-18 | 15 |
glial cell | 2.85e-18 | 15 |
glioblast | 2.85e-18 | 15 |
glioblast (sensu Vertebrata) | 2.85e-18 | 15 |
neuron associated cell | 1.94e-16 | 17 |
neuron associated cell (sensu Vertebrata) | 1.94e-16 | 17 |
kidney cortical cell | 5.08e-12 | 12 |
renal cortical epithelial cell | 5.08e-12 | 12 |
neural cell | 8.31e-12 | 25 |
epithelial cell of nephron | 8.10e-10 | 15 |
kidney cell | 8.90e-09 | 17 |
kidney epithelial cell | 8.90e-09 | 17 |
migratory neural crest cell | 1.11e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 7.84e-20 | 7 |
renal glomerulus | 7.84e-20 | 7 |
renal corpuscle | 7.84e-20 | 7 |
glomerular capsule | 7.84e-20 | 7 |
metanephric mesenchyme | 7.84e-20 | 7 |
glomerular tuft | 7.84e-20 | 7 |
S-shaped body | 7.84e-20 | 7 |
renal vesicle | 7.84e-20 | 7 |
comma-shaped body | 7.84e-20 | 7 |
mesonephric epithelium | 1.71e-17 | 8 |
mesonephric tubule | 1.71e-17 | 8 |
nephric duct | 1.71e-17 | 8 |
renal duct | 1.71e-17 | 8 |
mesonephric duct | 1.71e-17 | 8 |
pronephric duct | 1.71e-17 | 8 |
mesonephros | 1.13e-15 | 9 |
pronephros | 1.13e-15 | 9 |
nephrogenic cord | 1.13e-15 | 9 |
pronephric mesoderm | 1.13e-15 | 9 |
rostral part of nephrogenic cord | 1.13e-15 | 9 |
presumptive pronephric mesoderm | 1.13e-15 | 9 |
urogenital ridge | 5.10e-13 | 11 |
cortex of kidney | 5.08e-12 | 12 |
renal parenchyma | 5.08e-12 | 12 |
intraembryonic coelom | 5.08e-12 | 12 |
cortex | 8.10e-10 | 15 |
nephron epithelium | 8.10e-10 | 15 |
renal tubule | 8.10e-10 | 15 |
parenchyma | 8.10e-10 | 15 |
nephron tubule | 8.10e-10 | 15 |
nephron | 8.10e-10 | 15 |
uriniferous tubule | 8.10e-10 | 15 |
nephrogenic mesenchyme | 8.10e-10 | 15 |
excretory tube | 2.89e-09 | 16 |
kidney epithelium | 2.89e-09 | 16 |
duct | 5.94e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.66e-25 | 11 |
lung small cell carcinoma | 1.70e-09 | 4 |