FFCP PHASE1:Hg19::chr15:48498467..48498476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6557 | |EntrezGene=6557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10910 | |HGNC=10910 | ||
|TSSclassifier=strong | |||
|UniProt=Q13621,Q8IUN5,B4DPF4,E9PDW4 | |UniProt=Q13621,Q8IUN5,B4DPF4,E9PDW4 | ||
|association_with_transcript=-21bp_to_ENST00000380993,NM_000338,NM_001184832,uc001zwn.3,uc010bem.2_5end | |association_with_transcript=-21bp_to_ENST00000380993,NM_000338,NM_001184832,uc001zwn.3,uc010bem.2_5end | ||
|cluster_id=chr15:48498467..48498476,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_6_at_SLC12A1_5end | |description=CAGE_peak_6_at_SLC12A1_5end | ||
|id=chr15:48498467..48498476,+ | |id=chr15:48498467..48498476,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.00e-40;10!UBERON:0007687;2.00e-40;10!UBERON:0003104;1.90e-14;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!4.74e-14!27;UBERON:0003918!4.74e-14!27;UBERON:0005095!4.74e-14!27;UBERON:0007687!4.74e-14!27;UBERON:0000489!5.47e-12!32;UBERON:0000966!3.49e-09!5;UBERON:0005388!3.49e-09!5;UBERON:0001802!3.49e-09!5;UBERON:0006554!6.16e-09!44;UBERON:0001008!9.36e-09!45;UBERON:0005172!2.69e-07!55;UBERON:0005173!2.69e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.03e-17;24!UBERON:0011143;1.03e-17;24!UBERON:0000489;6.74e-15;29!UBERON:0006554;1.90e-14;30!UBERON:0001008;1.90e-14;30!UBERON:0005172;1.47e-07;52!UBERON:0005173;1.47e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.86e-16,26;UBERON:0003918,1.86e-16,26;UBERON:0011143,1.86e-16,26;UBERON:0005095,1.86e-16,26;UBERON:0007687,1.86e-16,26;UBERON:0000489,5.04e-14,31;UBERON:0006554,1.08e-09,47;UBERON:0001008,1.62e-09,48;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p6@SLC12A1 | |short_description=p6@SLC12A1 | ||
}} | }} |
Latest revision as of 21:43, 17 September 2015
Short description: | p6@SLC12A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC12A1_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -21bp_to_ENST00000380993, NM_000338, NM_001184832, uc001zwn.3, uc010bem.2_5end |
EntrezGene: | SLC12A1 |
HGNC: | 10910 |
UniProt: | Q13621Q8IUN5B4DPF4E9PDW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.86e-16 | 26 |
kidney mesenchyme | 1.86e-16 | 26 |
upper urinary tract | 1.86e-16 | 26 |
kidney rudiment | 1.86e-16 | 26 |
kidney field | 1.86e-16 | 26 |
cavitated compound organ | 5.04e-14 | 31 |
urinary system structure | 1.08e-09 | 47 |
renal system | 1.62e-09 | 48 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
compound organ | 4.47e-07 | 68 |