FFCP PHASE1:Hg19::chr11:124543773..124543782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53340 | |EntrezGene=53340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11210 | |HGNC=11210 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000529498_5end | |association_with_transcript=-23bp_to_ENST00000529498_5end | ||
|cluster_id=chr11:124543773..124543782,+ | |||
|description=CAGE_peak_2_at_SPA17_5end | |description=CAGE_peak_2_at_SPA17_5end | ||
|id=chr11:124543773..124543782,+ | |id=chr11:124543773..124543782,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.39e-09;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;2.39e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.38e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!3.75e-16!86;UBERON:0001017!1.71e-15!82;UBERON:0000073!6.14e-15!94;UBERON:0001016!6.14e-15!94;UBERON:0002780!2.60e-13!41;UBERON:0001890!2.60e-13!41;UBERON:0006240!2.60e-13!41;UBERON:0000955!2.70e-13!69;UBERON:0006238!2.70e-13!69;UBERON:0001049!3.41e-13!57;UBERON:0005068!3.41e-13!57;UBERON:0006241!3.41e-13!57;UBERON:0007135!3.41e-13!57;UBERON:0002346!3.79e-13!90;UBERON:0002616!6.91e-13!59;UBERON:0003080!1.29e-12!42;UBERON:0003075!1.36e-12!86;UBERON:0007284!1.36e-12!86;UBERON:0000033!6.76e-12!123;UBERON:0003056!7.83e-12!61;UBERON:0000153!1.69e-11!129;UBERON:0007811!1.69e-11!129;UBERON:0000924!8.31e-11!173;UBERON:0006601!8.31e-11!173;UBERON:0002020!1.13e-10!34;UBERON:0003528!1.13e-10!34;UBERON:0004121!2.76e-10!169;UBERON:0001893!7.37e-10!34;UBERON:0001869!1.04e-09!32;UBERON:0002791!1.38e-09!33;UBERON:0000956!9.39e-07!25;UBERON:0000203!9.39e-07!25 | |ontology_enrichment_uberon=UBERON:0005743!3.75e-16!86;UBERON:0001017!1.71e-15!82;UBERON:0000073!6.14e-15!94;UBERON:0001016!6.14e-15!94;UBERON:0002780!2.60e-13!41;UBERON:0001890!2.60e-13!41;UBERON:0006240!2.60e-13!41;UBERON:0000955!2.70e-13!69;UBERON:0006238!2.70e-13!69;UBERON:0001049!3.41e-13!57;UBERON:0005068!3.41e-13!57;UBERON:0006241!3.41e-13!57;UBERON:0007135!3.41e-13!57;UBERON:0002346!3.79e-13!90;UBERON:0002616!6.91e-13!59;UBERON:0003080!1.29e-12!42;UBERON:0003075!1.36e-12!86;UBERON:0007284!1.36e-12!86;UBERON:0000033!6.76e-12!123;UBERON:0003056!7.83e-12!61;UBERON:0000153!1.69e-11!129;UBERON:0007811!1.69e-11!129;UBERON:0000924!8.31e-11!173;UBERON:0006601!8.31e-11!173;UBERON:0002020!1.13e-10!34;UBERON:0003528!1.13e-10!34;UBERON:0004121!2.76e-10!169;UBERON:0001893!7.37e-10!34;UBERON:0001869!1.04e-09!32;UBERON:0002791!1.38e-09!33;UBERON:0000956!9.39e-07!25;UBERON:0000203!9.39e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.39e-09;2!UBERON:0002173;2.39e-09;2!UBERON:0002186;2.39e-09;2!UBERON:0002298;5.28e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.38e-09,2;UBERON:0002173,3.38e-09,2;UBERON:0002186,3.38e-09,2;UBERON:0001017,3.34e-08,81;UBERON:0000073,1.96e-07,53;UBERON:0002616,1.96e-07,53;UBERON:0002298,3.93e-07,6;UBERON:0001016,4.31e-07,89;UBERON:0001049,6.21e-07,56;UBERON:0005068,6.21e-07,56;UBERON:0006241,6.21e-07,56;UBERON:0007135,6.21e-07,56 | |||
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| ||
|short_description=p2@SPA17 | |short_description=p2@SPA17 | ||
}} | }} |
Latest revision as of 11:26, 16 September 2015
Short description: | p2@SPA17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPA17_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000529498_5end |
EntrezGene: | SPA17 |
HGNC: | 11210 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.38e-09 | 2 |
alveolar duct | 3.38e-09 | 2 |
bronchiole | 3.38e-09 | 2 |
central nervous system | 3.34e-08 | 81 |
regional part of nervous system | 1.96e-07 | 53 |
regional part of brain | 1.96e-07 | 53 |
brainstem | 3.93e-07 | 6 |
nervous system | 4.31e-07 | 89 |
neural tube | 6.21e-07 | 56 |
neural rod | 6.21e-07 | 56 |
future spinal cord | 6.21e-07 | 56 |
neural keel | 6.21e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.38e-09 | 2 |